Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176290 | sp|Q8L3W1|VRN1_ARATH | 27.714 | 350 | 196 | 10 | 18 | 326 | 6 | 339 | 6.92e-34 | 135 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176290 | A0A072VGT1 | 92.481 | 399 | 26 | 1 | 33 | 431 | 1 | 395 | 0.0 | 733 |
Gene ID | Type | Classification |
---|---|---|
Msa0176290 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176290 | MtrunA17_Chr1g0163071 | 92.977 | 299 | 17 | 1 | 33 | 331 | 1 | 295 | 0.0 | 549 |
Msa0176290 | MtrunA17_Chr1g0208771 | 46.053 | 456 | 222 | 11 | 34 | 479 | 13 | 454 | 9.19e-123 | 371 |
Msa0176290 | MtrunA17_Chr1g0208771 | 36.585 | 123 | 75 | 2 | 476 | 595 | 9 | 131 | 1.95e-12 | 69.7 |
Msa0176290 | MtrunA17_Chr8g0390841 | 41.406 | 512 | 242 | 15 | 1 | 478 | 26 | 513 | 2.42e-116 | 357 |
Msa0176290 | MtrunA17_Chr1g0163081 | 83.673 | 147 | 23 | 1 | 475 | 621 | 1 | 146 | 7.86e-86 | 264 |
Msa0176290 | MtrunA17_Chr1g0163081 | 36.283 | 113 | 65 | 4 | 33 | 141 | 5 | 114 | 2.26e-11 | 62.0 |
Msa0176290 | MtrunA17_Chr1g0162161 | 75.839 | 149 | 32 | 1 | 477 | 621 | 1 | 149 | 8.92e-76 | 238 |
Msa0176290 | MtrunA17_Chr1g0162161 | 35.714 | 112 | 65 | 4 | 33 | 140 | 3 | 111 | 2.35e-11 | 62.4 |
Msa0176290 | MtrunA17_Chr1g0163101 | 75.862 | 145 | 33 | 2 | 479 | 621 | 32 | 176 | 2.26e-72 | 230 |
Msa0176290 | MtrunA17_Chr1g0163101 | 33.333 | 144 | 88 | 4 | 13 | 151 | 12 | 152 | 4.94e-15 | 73.6 |
Msa0176290 | MtrunA17_Chr1g0163121 | 73.793 | 145 | 31 | 1 | 477 | 621 | 8 | 145 | 1.53e-69 | 222 |
Msa0176290 | MtrunA17_Chr1g0163121 | 35.652 | 115 | 67 | 4 | 32 | 142 | 9 | 120 | 3.68e-12 | 64.3 |
Msa0176290 | MtrunA17_Chr1g0163131 | 69.504 | 141 | 38 | 2 | 479 | 615 | 33 | 172 | 1.16e-61 | 207 |
Msa0176290 | MtrunA17_Chr1g0163131 | 28.660 | 321 | 185 | 11 | 13 | 319 | 13 | 303 | 1.84e-22 | 98.6 |
Msa0176290 | MtrunA17_Chr6g0476181 | 61.585 | 164 | 37 | 3 | 479 | 621 | 1 | 159 | 1.88e-60 | 198 |
Msa0176290 | MtrunA17_Chr6g0476181 | 36.752 | 117 | 68 | 4 | 33 | 148 | 1 | 112 | 1.03e-11 | 63.5 |
Msa0176290 | MtrunA17_Chr1g0163161 | 71.852 | 135 | 32 | 3 | 492 | 621 | 1 | 134 | 6.90e-60 | 196 |
Msa0176290 | MtrunA17_Chr1g0163161 | 37.255 | 102 | 56 | 3 | 46 | 142 | 1 | 99 | 2.43e-11 | 61.6 |
Msa0176290 | MtrunA17_Chr1g0163141 | 59.036 | 166 | 45 | 2 | 479 | 621 | 10 | 175 | 3.26e-57 | 191 |
Msa0176290 | MtrunA17_Chr1g0163141 | 38.542 | 96 | 56 | 2 | 32 | 127 | 9 | 101 | 4.22e-13 | 68.2 |
Msa0176290 | MtrunA17_Chr3g0131891 | 37.309 | 327 | 152 | 9 | 13 | 323 | 14 | 303 | 1.32e-55 | 191 |
Msa0176290 | MtrunA17_Chr3g0131891 | 40.367 | 109 | 61 | 3 | 479 | 584 | 34 | 141 | 4.93e-13 | 70.9 |
Msa0176290 | MtrunA17_Chr7g0233541 | 34.839 | 310 | 167 | 7 | 33 | 330 | 1 | 287 | 1.31e-49 | 174 |
Msa0176290 | MtrunA17_Chr7g0233541 | 43.182 | 88 | 47 | 2 | 479 | 563 | 1 | 88 | 7.45e-12 | 66.6 |
Msa0176290 | MtrunA17_Chr7g0233561 | 32.523 | 329 | 169 | 6 | 16 | 323 | 16 | 312 | 7.22e-49 | 173 |
Msa0176290 | MtrunA17_Chr7g0233561 | 41.053 | 95 | 53 | 2 | 480 | 571 | 34 | 128 | 5.34e-12 | 67.4 |
Msa0176290 | MtrunA17_Chr7g0233521 | 34.304 | 309 | 153 | 8 | 33 | 330 | 1 | 270 | 1.82e-47 | 168 |
Msa0176290 | MtrunA17_Chr7g0233521 | 35.115 | 131 | 68 | 5 | 479 | 593 | 1 | 130 | 2.45e-11 | 65.1 |
Msa0176290 | MtrunA17_Chr3g0103181 | 32.390 | 318 | 164 | 8 | 12 | 322 | 6 | 279 | 1.22e-44 | 160 |
Msa0176290 | MtrunA17_Chr3g0103181 | 27.273 | 275 | 159 | 9 | 235 | 479 | 13 | 276 | 4.16e-19 | 87.8 |
Msa0176290 | MtrunA17_Chr7g0233531 | 31.715 | 309 | 161 | 7 | 33 | 330 | 1 | 270 | 1.07e-42 | 155 |
Msa0176290 | MtrunA17_Chr7g0233531 | 40.625 | 96 | 54 | 2 | 479 | 571 | 1 | 96 | 1.16e-11 | 65.9 |
Msa0176290 | MtrunA17_Chr4g0033961 | 28.362 | 409 | 211 | 12 | 18 | 347 | 6 | 411 | 1.18e-41 | 156 |
Msa0176290 | MtrunA17_Chr3g0103191 | 34.686 | 271 | 138 | 8 | 12 | 282 | 6 | 237 | 1.24e-40 | 148 |
Msa0176290 | MtrunA17_Chr3g0103191 | 35.433 | 127 | 74 | 3 | 467 | 590 | 13 | 134 | 2.15e-13 | 70.5 |
Msa0176290 | MtrunA17_Chr4g0067431 | 31.118 | 331 | 196 | 11 | 13 | 331 | 10 | 320 | 1.12e-37 | 142 |
Msa0176290 | MtrunA17_Chr4g0067431 | 38.028 | 142 | 72 | 6 | 480 | 612 | 31 | 165 | 3.49e-19 | 89.0 |
Msa0176290 | MtrunA17_Chr1g0163181 | 28.070 | 456 | 266 | 16 | 26 | 470 | 13 | 417 | 2.35e-37 | 144 |
Msa0176290 | MtrunA17_Chr1g0163181 | 37.013 | 154 | 79 | 5 | 480 | 615 | 21 | 174 | 6.00e-23 | 102 |
Msa0176290 | MtrunA17_Chr3g0103171 | 28.956 | 297 | 166 | 7 | 34 | 322 | 6 | 265 | 9.39e-36 | 135 |
Msa0176290 | MtrunA17_Chr3g0103171 | 25.869 | 259 | 160 | 7 | 251 | 479 | 6 | 262 | 2.03e-16 | 79.7 |
Msa0176290 | MtrunA17_Chr3g0103171 | 37.000 | 100 | 60 | 2 | 475 | 571 | 1 | 100 | 2.91e-14 | 73.6 |
Msa0176290 | MtrunA17_Chr3g0103151 | 41.830 | 153 | 85 | 3 | 16 | 168 | 10 | 158 | 1.06e-32 | 123 |
Msa0176290 | MtrunA17_Chr3g0103151 | 35.938 | 128 | 72 | 4 | 467 | 590 | 13 | 134 | 2.63e-15 | 73.9 |
Msa0176290 | MtrunA17_Chr7g0233571 | 33.040 | 227 | 131 | 4 | 18 | 244 | 10 | 215 | 4.87e-32 | 123 |
Msa0176290 | MtrunA17_Chr7g0233571 | 44.792 | 96 | 50 | 2 | 479 | 571 | 25 | 120 | 3.36e-15 | 75.1 |
Msa0176290 | MtrunA17_Chr1g0163221 | 29.846 | 325 | 191 | 9 | 13 | 331 | 6 | 299 | 1.64e-29 | 120 |
Msa0176290 | MtrunA17_Chr1g0163221 | 42.857 | 84 | 44 | 3 | 480 | 559 | 27 | 110 | 8.84e-11 | 63.9 |
Msa0176290 | MtrunA17_Chr1g0163261 | 25.545 | 321 | 194 | 6 | 17 | 330 | 8 | 290 | 3.34e-26 | 109 |
Msa0176290 | MtrunA17_Chr1g0163261 | 45.882 | 85 | 45 | 1 | 480 | 563 | 25 | 109 | 2.25e-18 | 86.3 |
Msa0176290 | MtrunA17_Chr3g0103201 | 29.921 | 254 | 134 | 8 | 76 | 322 | 4 | 220 | 1.92e-25 | 104 |
Msa0176290 | MtrunA17_Chr3g0103201 | 30.455 | 220 | 118 | 10 | 289 | 479 | 4 | 217 | 1.39e-13 | 70.5 |
Msa0176290 | MtrunA17_Chr1g0163251 | 27.742 | 310 | 182 | 9 | 26 | 329 | 13 | 286 | 2.03e-25 | 108 |
Msa0176290 | MtrunA17_Chr1g0163251 | 52.809 | 89 | 41 | 1 | 480 | 567 | 21 | 109 | 9.51e-24 | 103 |
Msa0176290 | MtrunA17_Chr5g0419201 | 33.962 | 159 | 89 | 3 | 18 | 168 | 16 | 166 | 7.41e-25 | 102 |
Msa0176290 | MtrunA17_Chr5g0419201 | 34.307 | 137 | 76 | 5 | 465 | 590 | 15 | 148 | 3.42e-16 | 77.4 |
Msa0176290 | MtrunA17_Chr1g0163231 | 41.606 | 137 | 73 | 2 | 480 | 615 | 25 | 155 | 2.08e-24 | 103 |
Msa0176290 | MtrunA17_Chr1g0163231 | 22.540 | 315 | 187 | 10 | 18 | 321 | 9 | 277 | 1.78e-18 | 86.7 |
Msa0176290 | MtrunA17_Chr1g0154041 | 25.392 | 319 | 207 | 6 | 32 | 319 | 29 | 347 | 2.21e-24 | 107 |
Msa0176290 | MtrunA17_Chr3g0077411 | 21.852 | 540 | 312 | 15 | 18 | 489 | 25 | 522 | 8.77e-24 | 105 |
Msa0176290 | MtrunA17_Chr3g0077411 | 25.460 | 326 | 157 | 9 | 15 | 322 | 259 | 516 | 4.20e-22 | 100 |
Msa0176290 | MtrunA17_Chr1g0163241 | 46.237 | 93 | 49 | 1 | 476 | 567 | 19 | 111 | 1.16e-22 | 95.1 |
Msa0176290 | MtrunA17_Chr1g0163241 | 40.964 | 83 | 47 | 1 | 34 | 116 | 23 | 103 | 3.22e-14 | 70.9 |
Msa0176290 | MtrunA17_Chr1g0171611 | 39.416 | 137 | 63 | 4 | 480 | 615 | 25 | 142 | 6.22e-22 | 96.7 |
Msa0176290 | MtrunA17_Chr1g0171611 | 34.343 | 99 | 63 | 1 | 18 | 116 | 9 | 105 | 2.37e-14 | 73.9 |
Msa0176290 | MtrunA17_Chr5g0429931 | 27.000 | 300 | 141 | 9 | 34 | 323 | 11 | 242 | 6.31e-22 | 95.5 |
Msa0176290 | MtrunA17_Chr6g0467351 | 32.911 | 158 | 92 | 3 | 16 | 172 | 13 | 157 | 6.21e-21 | 92.0 |
Msa0176290 | MtrunA17_Chr6g0467351 | 44.048 | 84 | 43 | 3 | 480 | 559 | 31 | 114 | 1.22e-14 | 73.9 |
Msa0176290 | MtrunA17_Chr1g0163191 | 42.718 | 103 | 56 | 2 | 480 | 581 | 21 | 121 | 1.34e-20 | 89.0 |
Msa0176290 | MtrunA17_Chr1g0163191 | 41.758 | 91 | 51 | 1 | 26 | 116 | 13 | 101 | 1.91e-17 | 80.1 |
Msa0176290 | MtrunA17_Chr3g0077451 | 27.119 | 295 | 148 | 7 | 32 | 326 | 10 | 237 | 1.35e-20 | 91.3 |
Msa0176290 | MtrunA17_Chr1g0163201 | 24.834 | 302 | 190 | 6 | 34 | 328 | 19 | 290 | 2.13e-20 | 94.0 |
Msa0176290 | MtrunA17_Chr1g0163201 | 44.944 | 89 | 48 | 1 | 480 | 567 | 19 | 107 | 3.77e-19 | 90.1 |
Msa0176290 | MtrunA17_Chr1g0162441 | 34.532 | 139 | 78 | 2 | 18 | 146 | 7 | 142 | 2.82e-19 | 90.9 |
Msa0176290 | MtrunA17_Chr1g0162441 | 28.000 | 175 | 114 | 4 | 165 | 327 | 222 | 396 | 7.15e-17 | 83.6 |
Msa0176290 | MtrunA17_Chr3g0077461 | 26.689 | 296 | 132 | 8 | 21 | 311 | 241 | 456 | 6.85e-19 | 90.1 |
Msa0176290 | MtrunA17_Chr3g0077461 | 22.934 | 484 | 289 | 18 | 34 | 477 | 23 | 462 | 7.42e-16 | 80.5 |
Msa0176290 | MtrunA17_Chr3g0103161 | 39.669 | 121 | 68 | 3 | 362 | 479 | 2 | 120 | 1.47e-17 | 79.3 |
Msa0176290 | MtrunA17_Chr1g0154071 | 24.762 | 315 | 211 | 7 | 32 | 320 | 169 | 483 | 1.36e-16 | 83.2 |
Msa0176290 | MtrunA17_Chr1g0154161 | 24.214 | 318 | 191 | 11 | 16 | 322 | 28 | 306 | 2.83e-15 | 77.4 |
Msa0176290 | MtrunA17_Chr1g0162411 | 30.657 | 137 | 84 | 2 | 18 | 146 | 7 | 140 | 7.67e-15 | 77.4 |
Msa0176290 | MtrunA17_Chr1g0163061 | 36.449 | 107 | 61 | 2 | 16 | 118 | 13 | 116 | 1.11e-14 | 74.7 |
Msa0176290 | MtrunA17_Chr1g0163061 | 44.048 | 84 | 43 | 2 | 480 | 559 | 31 | 114 | 8.44e-13 | 69.3 |
Msa0176290 | MtrunA17_Chr3g0077381 | 21.478 | 433 | 285 | 13 | 32 | 437 | 34 | 438 | 1.12e-14 | 76.6 |
Msa0176290 | MtrunA17_Chr1g0154171 | 22.258 | 310 | 217 | 7 | 31 | 319 | 35 | 341 | 6.30e-14 | 73.6 |
Msa0176290 | MtrunA17_Chr4g0009491 | 22.120 | 434 | 289 | 13 | 32 | 437 | 11 | 423 | 1.38e-13 | 73.2 |
Msa0176290 | MtrunA17_Chr4g0009491 | 29.139 | 151 | 78 | 3 | 21 | 171 | 229 | 350 | 1.51e-11 | 67.0 |
Msa0176290 | MtrunA17_Chr1g0154151 | 23.411 | 299 | 211 | 9 | 34 | 321 | 20 | 311 | 1.14e-12 | 69.7 |
Msa0176290 | MtrunA17_Chr1g0154111 | 27.368 | 190 | 120 | 6 | 374 | 545 | 248 | 437 | 2.05e-11 | 67.0 |
Msa0176290 | MtrunA17_Chr1g0163091 | 29.630 | 108 | 68 | 3 | 229 | 328 | 17 | 124 | 7.13e-11 | 61.2 |
Msa0176290 | MtrunA17_Chr3g0077361 | 29.752 | 121 | 81 | 2 | 18 | 137 | 40 | 157 | 7.15e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0176290 | AT3G18990.1 | 27.714 | 350 | 196 | 10 | 18 | 326 | 6 | 339 | 7.03e-35 | 135 |
Msa0176290 | AT3G18990.1 | 34.906 | 106 | 64 | 3 | 376 | 479 | 230 | 332 | 6.57e-12 | 67.8 |
Msa0176290 | AT3G18990.2 | 27.299 | 348 | 200 | 9 | 18 | 326 | 6 | 339 | 3.53e-34 | 134 |
Msa0176290 | AT3G18990.2 | 34.906 | 106 | 64 | 3 | 376 | 479 | 230 | 332 | 1.01e-11 | 67.4 |
Msa0176290 | AT4G01580.1 | 33.571 | 140 | 84 | 2 | 17 | 154 | 29 | 161 | 5.31e-18 | 82.8 |
Msa0176290 | AT3G18960.2 | 36.275 | 102 | 65 | 0 | 17 | 118 | 29 | 130 | 1.47e-17 | 81.6 |
Msa0176290 | AT3G18960.1 | 36.275 | 102 | 65 | 0 | 17 | 118 | 29 | 130 | 2.06e-17 | 81.6 |
Msa0176290 | AT1G49480.3 | 30.405 | 148 | 95 | 5 | 186 | 326 | 78 | 224 | 7.86e-15 | 74.7 |
Msa0176290 | AT1G49480.3 | 34.906 | 106 | 64 | 3 | 376 | 479 | 115 | 217 | 1.29e-12 | 68.2 |
Msa0176290 | AT1G49480.1 | 30.405 | 148 | 95 | 5 | 186 | 326 | 78 | 224 | 7.86e-15 | 74.7 |
Msa0176290 | AT1G49480.1 | 34.906 | 106 | 64 | 3 | 376 | 479 | 115 | 217 | 1.29e-12 | 68.2 |
Msa0176290 | AT1G49480.2 | 30.405 | 148 | 95 | 5 | 186 | 326 | 78 | 224 | 7.86e-15 | 74.7 |
Msa0176290 | AT1G49480.2 | 34.906 | 106 | 64 | 3 | 376 | 479 | 115 | 217 | 1.29e-12 | 68.2 |
Msa0176290 | AT3G18960.3 | 40.000 | 85 | 51 | 0 | 34 | 118 | 9 | 93 | 1.36e-14 | 72.8 |
Msa0176290 | AT1G49475.1 | 33.333 | 135 | 79 | 4 | 17 | 142 | 33 | 165 | 1.71e-14 | 72.8 |
Msa0176290 | AT4G33280.1 | 24.516 | 310 | 205 | 10 | 31 | 330 | 36 | 326 | 2.42e-14 | 75.1 |
Msa0176290 | AT4G00260.1 | 25.475 | 263 | 167 | 11 | 230 | 481 | 130 | 374 | 4.37e-11 | 66.2 |
Msa0176290 | AT4G31650.1 | 23.846 | 260 | 159 | 10 | 228 | 469 | 125 | 363 | 8.78e-11 | 65.1 |
Find 99 sgRNAs with CRISPR-Local
Find 582 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACCTGATTTGGAAGTTTA+AGG | 0.096268 | 1_4:-62601720 | None:intergenic |
GTAGAGGTTGGAAGCTATTT+TGG | 0.155141 | 1_4:+62600279 | Msa0176290:CDS |
TGAGGACTCCATTGAAATTT+TGG | 0.168496 | 1_4:+62595831 | Msa0176290:CDS |
AATCAAATAATCCTTCTTTC+AGG | 0.198997 | 1_4:+62596214 | Msa0176290:CDS |
TACAACGCGATTATGATATT+TGG | 0.219508 | 1_4:+62601761 | Msa0176290:CDS |
AACTCTTGGATGGGAGAGTT+TGG | 0.242668 | 1_4:+62599364 | Msa0176290:CDS |
GGACACATAATTGGTGATTT+TGG | 0.244060 | 1_4:-62595886 | None:intergenic |
CATGATGCTTAGGCAGGTTT+TGG | 0.247177 | 1_4:-62595969 | None:intergenic |
TGTATTAGATGATAGTAAAT+TGG | 0.248691 | 1_4:+62601873 | Msa0176290:CDS |
TAATTTGTAATGAAGGAATT+TGG | 0.257343 | 1_4:-62600158 | None:intergenic |
CAAAGTAAGGTATTGGCTTT+TGG | 0.269874 | 1_4:-62599484 | None:intergenic |
GTACACAACAAGTTGAAAAT+TGG | 0.270510 | 1_4:+62599438 | Msa0176290:CDS |
GAATAACAATGCAACTTTAC+AGG | 0.277076 | 1_4:-62600233 | None:intergenic |
TTTGGAAGTTTAAGGGATAT+TGG | 0.287162 | 1_4:-62601712 | None:intergenic |
CTAGAATGCCCTCGTTGATT+TGG | 0.297882 | 1_4:-62600005 | None:intergenic |
AGGTTGAGTGCAAAATGTTT+TGG | 0.311705 | 1_4:+62601737 | Msa0176290:CDS |
AGCTTTCCATCTTGAAGAAT+TGG | 0.312657 | 1_4:-62594952 | None:intergenic |
AACAACAATGACTAGCAATA+AGG | 0.315318 | 1_4:+62594873 | None:intergenic |
ATAAATATGTGAAGACTTCA+TGG | 0.326594 | 1_4:-62596241 | None:intergenic |
ATGATATTTGGCTAGTGAAT+TGG | 0.327057 | 1_4:+62601773 | Msa0176290:CDS |
ATCCCTTAAACTTCCAAATC+AGG | 0.338377 | 1_4:+62601717 | Msa0176290:CDS |
TGTGGTTGAGGACACATAAT+TGG | 0.354680 | 1_4:-62595895 | None:intergenic |
TGACATTCTTCTTCAACTCT+TGG | 0.360124 | 1_4:+62599350 | Msa0176290:CDS |
TTACTTTCAAAGTAAGGTAT+TGG | 0.362100 | 1_4:-62599491 | None:intergenic |
AACCTGATTTGGAAGTTTAA+GGG | 0.367656 | 1_4:-62601719 | None:intergenic |
GAAACTATTATGACAAATAA+AGG | 0.369590 | 1_4:+62599705 | Msa0176290:CDS |
TACACAACAAGTTGAAAATT+GGG | 0.372067 | 1_4:+62599439 | Msa0176290:CDS |
TGGTCCTTAGTGAAACCTTT+TGG | 0.375145 | 1_4:-62595532 | None:intergenic |
CTCAATTTCTTATGTGGTTG+AGG | 0.376046 | 1_4:-62595907 | None:intergenic |
TGTTATTCCAACATGAAATC+AGG | 0.384360 | 1_4:+62600248 | Msa0176290:CDS |
TATCTTTCTACAAAATTCCT+TGG | 0.385312 | 1_4:-62601670 | None:intergenic |
TTCCTTCATTACAAATTACT+TGG | 0.385639 | 1_4:+62600163 | Msa0176290:CDS |
ACTCTTGGATGGGAGAGTTT+GGG | 0.388176 | 1_4:+62599365 | Msa0176290:CDS |
ATCCAAGTAATTTGTAATGA+AGG | 0.391002 | 1_4:-62600165 | None:intergenic |
GATTTGACATGTCATTCATA+TGG | 0.392626 | 1_4:-62595552 | None:intergenic |
TTCAATCTCAAGGGTGCTCT+TGG | 0.393696 | 1_4:-62595752 | None:intergenic |
ATATTATTACTTTCAAAGTA+AGG | 0.401134 | 1_4:-62599497 | None:intergenic |
TATTTAACTGCTCCTGCTCT+TGG | 0.409863 | 1_4:-62596176 | None:intergenic |
GCTTCCAACCTCTACAAAAC+TGG | 0.416735 | 1_4:-62600271 | None:intergenic |
TCACTTCTCAATTTCTTATG+TGG | 0.420211 | 1_4:-62595913 | None:intergenic |
TGACTTGTCCAAAATTTCAA+TGG | 0.423265 | 1_4:-62595839 | None:intergenic |
TCAAAGAGACAAAGACTTCT+CGG | 0.423887 | 1_4:+62599671 | Msa0176290:CDS |
CAGATGGTGATGTTAAAGTC+TGG | 0.424548 | 1_4:+62600197 | Msa0176290:CDS |
CATAAAATGTACCACTAGAT+TGG | 0.435482 | 1_4:-62595993 | None:intergenic |
ACAACAATGACTAGCAATAA+GGG | 0.438593 | 1_4:+62594874 | None:intergenic |
TGAGTACGACTAAAATCAAT+GGG | 0.448181 | 1_4:+62595614 | Msa0176290:CDS |
ATTCTTCTTCAACTCTTGGA+TGG | 0.449374 | 1_4:+62599354 | Msa0176290:CDS |
ACATATTTATAGTCATTCCT+TGG | 0.460818 | 1_4:+62596254 | Msa0176290:CDS |
ACACATTATTCACTAGATCA+TGG | 0.461106 | 1_4:+62595673 | Msa0176290:CDS |
TGGAGTTGAATTTATCAGCT+TGG | 0.461811 | 1_4:-62599953 | None:intergenic |
TCAACGAGGGCATTCTAGAT+TGG | 0.465952 | 1_4:+62600010 | Msa0176290:CDS |
TTCTTCTTCAACTCTTGGAT+GGG | 0.471949 | 1_4:+62599355 | Msa0176290:CDS |
ATGAGTACGACTAAAATCAA+TGG | 0.474758 | 1_4:+62595613 | Msa0176290:CDS |
CTGGAAGAATTAAAGGTGGA+TGG | 0.489864 | 1_4:+62599403 | Msa0176290:CDS |
TGGGAAGAAAATAAATTGAA+AGG | 0.492702 | 1_4:+62600299 | Msa0176290:CDS |
ACCACACCAATTCTTCAAGA+TGG | 0.495178 | 1_4:+62594946 | Msa0176290:CDS |
AAAGATTTGCACGATCGCTT+AGG | 0.496687 | 1_4:+62601797 | Msa0176290:CDS |
AGTAATAATATTTAGACTTG+AGG | 0.498996 | 1_4:+62599509 | Msa0176290:CDS |
ATTGGACATGATGCTTAGGC+AGG | 0.499460 | 1_4:-62595975 | None:intergenic |
TTGGATTACCTTGATGTAGA+GGG | 0.501942 | 1_4:-62599545 | None:intergenic |
CTAGATTGGACATGATGCTT+AGG | 0.523842 | 1_4:-62595979 | None:intergenic |
GGAAAGGATATTCAATCTCA+AGG | 0.524747 | 1_4:-62595762 | None:intergenic |
AGATGGTGATGTTAAAGTCT+GGG | 0.527594 | 1_4:+62600198 | Msa0176290:CDS |
TCTGGAGTCTTGAGAAACAT+TGG | 0.528591 | 1_4:-62595574 | None:intergenic |
CACATTATTCACTAGATCAT+GGG | 0.539236 | 1_4:+62595674 | Msa0176290:CDS |
TTCATGGTAATCCTGAAAGA+AGG | 0.545664 | 1_4:-62596225 | None:intergenic |
TTGTCAATGTTTGTCCCTTG+AGG | 0.547113 | 1_4:-62602009 | None:intergenic |
TGTGTTTGCAGATGATTCCA+AGG | 0.559130 | 1_4:+62601653 | Msa0176290:intron |
TCGCGTTATGACAGGAGAGA+AGG | 0.560064 | 1_4:+62599872 | Msa0176290:intron |
ATTGGATTACCTTGATGTAG+AGG | 0.560769 | 1_4:-62599546 | None:intergenic |
GCGTTGTAGATGATACCAAA+AGG | 0.565115 | 1_4:+62595517 | Msa0176290:intron |
CTTGGATAACAAGGAACAGA+TGG | 0.569177 | 1_4:+62600181 | Msa0176290:CDS |
ACGAATAGTAGAAGCAGAGA+GGG | 0.570331 | 1_4:-62594908 | None:intergenic |
AAACTGGCCTGATTTCATGT+TGG | 0.576131 | 1_4:-62600255 | None:intergenic |
TACAAATTACTTGGATAACA+AGG | 0.576875 | 1_4:+62600172 | Msa0176290:CDS |
TGATTGTTAGCAAATTGTGA+TGG | 0.578116 | 1_4:-62599309 | None:intergenic |
TAAAGTCTGGGAAGAAATTG+TGG | 0.583236 | 1_4:+62600210 | Msa0176290:CDS |
GAAGAAAATAAATTGAAAGG+TGG | 0.594266 | 1_4:+62600302 | Msa0176290:CDS |
GATTGTTAGCAAATTGTGAT+GGG | 0.597689 | 1_4:-62599308 | None:intergenic |
GAAAGGATATTCAATCTCAA+GGG | 0.599161 | 1_4:-62595761 | None:intergenic |
GATACCAAAAGGTTTCACTA+AGG | 0.601016 | 1_4:+62595528 | Msa0176290:CDS |
ATGTTTCTCAAGACTCCAGA+TGG | 0.601949 | 1_4:+62595577 | Msa0176290:CDS |
AGTGACTCAAGTGAAGGTGT+TGG | 0.603054 | 1_4:+62595931 | Msa0176290:CDS |
TCCATCTTGAAGAATTGGTG+TGG | 0.604101 | 1_4:-62594947 | None:intergenic |
TTGAGAAGTGACTCAAGTGA+AGG | 0.604348 | 1_4:+62595925 | Msa0176290:CDS |
TTTGCACGATCGCTTAGGTG+TGG | 0.611771 | 1_4:+62601802 | Msa0176290:CDS |
CCACACACCCCTCTACATCA+AGG | 0.612061 | 1_4:+62599537 | Msa0176290:CDS |
AGTGATATTTCTACACCTCA+AGG | 0.612548 | 1_4:+62601994 | Msa0176290:CDS |
TTCACTAGATCATGGGCACA+TGG | 0.616979 | 1_4:+62595681 | Msa0176290:CDS |
CCTTGATGTAGAGGGGTGTG+TGG | 0.632002 | 1_4:-62599537 | None:intergenic |
TGGATTACCTTGATGTAGAG+GGG | 0.635013 | 1_4:-62599544 | None:intergenic |
ACACAACAAGTTGAAAATTG+GGG | 0.639889 | 1_4:+62599440 | Msa0176290:CDS |
GTGATATTTCTACACCTCAA+GGG | 0.650521 | 1_4:+62601995 | Msa0176290:CDS |
AACGAATAGTAGAAGCAGAG+AGG | 0.651419 | 1_4:-62594909 | None:intergenic |
AAGCATCATGTCCAATCTAG+TGG | 0.652413 | 1_4:+62595982 | Msa0176290:CDS |
TGATCAACAAAGTAGTGATG+AGG | 0.654895 | 1_4:+62595813 | Msa0176290:CDS |
AATATTATGCCAAATCAACG+AGG | 0.719522 | 1_4:+62599996 | Msa0176290:CDS |
ATATTATGCCAAATCAACGA+GGG | 0.724045 | 1_4:+62599997 | Msa0176290:CDS |
GAGTACGACTAAAATCAATG+GGG | 0.780347 | 1_4:+62595615 | Msa0176290:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAAAACAAAATATGAA+GGG | - | chr1_4:62594999-62595018 | None:intergenic | 10.0% |
!! | AATTAAAAAACAAAATATGA+AGG | - | chr1_4:62595000-62595019 | None:intergenic | 10.0% |
!!! | TTTTTCTTTCAATTATAAAA+TGG | - | chr1_4:62600584-62600603 | None:intergenic | 10.0% |
!!! | TTTTTTAAGTGTAAAAAATT+TGG | - | chr1_4:62601554-62601573 | None:intergenic | 10.0% |
!!! | TTATCTTTTAATTTATCGAA+TGG | + | chr1_4:62596030-62596049 | Msa0176290:intron | 15.0% |
!!! | AAATTTCAATGCATATATTT+TGG | - | chr1_4:62596328-62596347 | None:intergenic | 15.0% |
!!! | GTTTCTTTTACTATAAATAT+AGG | - | chr1_4:62596866-62596885 | None:intergenic | 15.0% |
!!! | GTTTCTTTTACTATAAATAT+AGG | - | chr1_4:62596866-62596885 | None:intergenic | 15.0% |
!! | ATATTATTACTTTCAAAGTA+AGG | - | chr1_4:62599500-62599519 | None:intergenic | 15.0% |
!!! | ATTATTTTGAAGATAAAACA+AGG | - | chr1_4:62599622-62599641 | None:intergenic | 15.0% |
!! | TAGTAAAGAAATAAATGAAA+TGG | - | chr1_4:62601362-62601381 | None:intergenic | 15.0% |
!!! | CTTTTAGTTTTTCAATATAA+AGG | + | chr1_4:62601829-62601848 | Msa0176290:CDS | 15.0% |
!!! | TATCTACAAGTTTTAACTTA+GGG | + | chr1_4:62595125-62595144 | Msa0176290:intron | 20.0% |
!!! | CATTTGAACAATTTTTCTTA+TGG | + | chr1_4:62595255-62595274 | Msa0176290:intron | 20.0% |
!! | TTTATATGTATGCTAACATA+AGG | + | chr1_4:62595486-62595505 | Msa0176290:intron | 20.0% |
!!! | ATTTGTTAAAAAGAATTCAG+AGG | + | chr1_4:62596375-62596394 | Msa0176290:intron | 20.0% |
!! | TTTGTTAAAAAGAATTCAGA+GGG | + | chr1_4:62596376-62596395 | Msa0176290:intron | 20.0% |
!!! | CAGATTTGTTACAATTTTAT+GGG | - | chr1_4:62596890-62596909 | None:intergenic | 20.0% |
!!! | TTTTTCAGAAACGTATTTTT+GGG | - | chr1_4:62596914-62596933 | None:intergenic | 20.0% |
!!! | ATTTTTCAGAAACGTATTTT+TGG | - | chr1_4:62596915-62596934 | None:intergenic | 20.0% |
!!! | CAGATTTGTTACAATTTTAT+GGG | - | chr1_4:62596890-62596909 | None:intergenic | 20.0% |
!!! | TTTTTCAGAAACGTATTTTT+GGG | - | chr1_4:62596914-62596933 | None:intergenic | 20.0% |
!!! | ATTTTTCAGAAACGTATTTT+TGG | - | chr1_4:62596915-62596934 | None:intergenic | 20.0% |
!!! | TATTTTTCTGGAAGAATTAA+AGG | + | chr1_4:62599396-62599415 | Msa0176290:CDS | 20.0% |
!! | AGTAATAATATTTAGACTTG+AGG | + | chr1_4:62599509-62599528 | Msa0176290:CDS | 20.0% |
!! | AAGATAAAACAAGGTAATAA+AGG | - | chr1_4:62599613-62599632 | None:intergenic | 20.0% |
!! | GAAACTATTATGACAAATAA+AGG | + | chr1_4:62599705-62599724 | Msa0176290:CDS | 20.0% |
!! | ATAATATTGACCTTGAAAAA+TGG | - | chr1_4:62599984-62600003 | None:intergenic | 20.0% |
!!! | TAATTTGTAATGAAGGAATT+TGG | - | chr1_4:62600161-62600180 | None:intergenic | 20.0% |
!!! | TATAACACTTGCTTTTTTAT+TGG | + | chr1_4:62600659-62600678 | Msa0176290:intron | 20.0% |
!! | TTGTTTGATGAAATTTATGT+GGG | - | chr1_4:62600740-62600759 | None:intergenic | 20.0% |
!! | TTTGTTTGATGAAATTTATG+TGG | - | chr1_4:62600741-62600760 | None:intergenic | 20.0% |
!!! | ACTTTTTGTTTATACATACA+AGG | + | chr1_4:62600991-62601010 | Msa0176290:intron | 20.0% |
!!! | CTTTTTGTTTATACATACAA+GGG | + | chr1_4:62600992-62601011 | Msa0176290:intron | 20.0% |
!!! | TTAGTTTTTCAATATAAAGG+AGG | + | chr1_4:62601832-62601851 | Msa0176290:CDS | 20.0% |
!!! | TAGTTTTTCAATATAAAGGA+GGG | + | chr1_4:62601833-62601852 | Msa0176290:CDS | 20.0% |
!! | TGTATTAGATGATAGTAAAT+TGG | + | chr1_4:62601873-62601892 | Msa0176290:CDS | 20.0% |
!!! | TTTAATTTGTTCTGCACATT+TGG | + | chr1_4:62595013-62595032 | Msa0176290:intron | 25.0% |
!! | TTTGAATTTTCACTTCATGA+TGG | + | chr1_4:62595044-62595063 | Msa0176290:intron | 25.0% |
!!! | CTATCTACAAGTTTTAACTT+AGG | + | chr1_4:62595124-62595143 | Msa0176290:intron | 25.0% |
! | ATAGACAAAAATTAACCCTT+CGG | + | chr1_4:62595158-62595177 | Msa0176290:intron | 25.0% |
!! | TATATTTTCAACCCTAAAGA+TGG | + | chr1_4:62595195-62595214 | Msa0176290:intron | 25.0% |
!! | ATATTTTCAACCCTAAAGAT+GGG | + | chr1_4:62595196-62595215 | Msa0176290:intron | 25.0% |
! | TTTATTTGTAGATGACGAAA+CGG | - | chr1_4:62595231-62595250 | None:intergenic | 25.0% |
!!! | TTTGTTCATGTTGATTTTCA+TGG | - | chr1_4:62595786-62595805 | None:intergenic | 25.0% |
! | AATCAAATAATCCTTCTTTC+AGG | + | chr1_4:62596214-62596233 | Msa0176290:CDS | 25.0% |
! | ATAAATATGTGAAGACTTCA+TGG | - | chr1_4:62596244-62596263 | None:intergenic | 25.0% |
! | ACATATTTATAGTCATTCCT+TGG | + | chr1_4:62596254-62596273 | Msa0176290:CDS | 25.0% |
! | GTTACAAAAGAGATTTCAAT+GGG | + | chr1_4:62596632-62596651 | Msa0176290:intron | 25.0% |
!!! | CCAGATTTGTTACAATTTTA+TGG | - | chr1_4:62596891-62596910 | None:intergenic | 25.0% |
! | CCATAAAATTGTAACAAATC+TGG | + | chr1_4:62596888-62596907 | Msa0176290:intron | 25.0% |
!!! | ATAAGTAAAGTTGTTGCTTT+AGG | + | chr1_4:62598140-62598159 | Msa0176290:intron | 25.0% |
! | TTTGTATATGACAAAGTCTT+TGG | - | chr1_4:62598179-62598198 | None:intergenic | 25.0% |
! | GTTACAAAAGAGATTTCAAT+GGG | + | chr1_4:62596632-62596651 | Msa0176290:intron | 25.0% |
!!! | CCAGATTTGTTACAATTTTA+TGG | - | chr1_4:62596891-62596910 | None:intergenic | 25.0% |
! | CCATAAAATTGTAACAAATC+TGG | + | chr1_4:62596888-62596907 | Msa0176290:intron | 25.0% |
!!! | GACATACTGCATTTTAATTT+CGG | - | chr1_4:62599289-62599308 | None:intergenic | 25.0% |
!! | TACACAACAAGTTGAAAATT+GGG | + | chr1_4:62599439-62599458 | Msa0176290:CDS | 25.0% |
! | TTACTTTCAAAGTAAGGTAT+TGG | - | chr1_4:62599494-62599513 | None:intergenic | 25.0% |
!! | TGCATCAAGTAACATTTTAA+CGG | - | chr1_4:62600131-62600150 | None:intergenic | 25.0% |
! | TTCCTTCATTACAAATTACT+TGG | + | chr1_4:62600163-62600182 | Msa0176290:CDS | 25.0% |
!! | ATCCAAGTAATTTGTAATGA+AGG | - | chr1_4:62600168-62600187 | None:intergenic | 25.0% |
! | TACAAATTACTTGGATAACA+AGG | + | chr1_4:62600172-62600191 | Msa0176290:CDS | 25.0% |
! | TGGGAAGAAAATAAATTGAA+AGG | + | chr1_4:62600299-62600318 | Msa0176290:CDS | 25.0% |
! | GAAGAAAATAAATTGAAAGG+TGG | + | chr1_4:62600302-62600321 | Msa0176290:CDS | 25.0% |
!! | CTTAATGTTCATATTTTCAG+AGG | + | chr1_4:62600368-62600387 | Msa0176290:intron | 25.0% |
! | AGGGTGAAATTTACTTTAAA+AGG | + | chr1_4:62600550-62600569 | Msa0176290:intron | 25.0% |
! | TTTATTGGATGAAACTAATG+TGG | + | chr1_4:62600674-62600693 | Msa0176290:intron | 25.0% |
! | TTATATGTGAAAACGACATT+TGG | - | chr1_4:62600828-62600847 | None:intergenic | 25.0% |
! | TGGTATATGGATATAAATAG+TGG | - | chr1_4:62601047-62601066 | None:intergenic | 25.0% |
! | CTAACTCAATGTTACAAAAT+CGG | - | chr1_4:62601115-62601134 | None:intergenic | 25.0% |
!!! | GATGCTTTAGAAAAGATTAA+TGG | - | chr1_4:62601328-62601347 | None:intergenic | 25.0% |
! | AAAAATCAAACCATGAATGA+AGG | - | chr1_4:62601401-62601420 | None:intergenic | 25.0% |
! | TATCTTTCTACAAAATTCCT+TGG | - | chr1_4:62601673-62601692 | None:intergenic | 25.0% |
!! | GGAATTTTGTAGAAAGATAT+TGG | + | chr1_4:62601674-62601693 | Msa0176290:CDS | 25.0% |
AAAAATTAACCCTTCGGAAA+TGG | + | chr1_4:62595164-62595183 | Msa0176290:intron | 30.0% | |
AAAATTAACCCTTCGGAAAT+GGG | + | chr1_4:62595165-62595184 | Msa0176290:intron | 30.0% | |
TTATTTGTAGATGACGAAAC+GGG | - | chr1_4:62595230-62595249 | None:intergenic | 30.0% | |
GTCATGTTAACAAATGTTCT+TGG | + | chr1_4:62595277-62595296 | Msa0176290:intron | 30.0% | |
ATGTTAACAAATGTTCTTGG+AGG | + | chr1_4:62595280-62595299 | Msa0176290:intron | 30.0% | |
GATTTGACATGTCATTCATA+TGG | - | chr1_4:62595555-62595574 | None:intergenic | 30.0% | |
ATGAGTACGACTAAAATCAA+TGG | + | chr1_4:62595613-62595632 | Msa0176290:CDS | 30.0% | |
TGAGTACGACTAAAATCAAT+GGG | + | chr1_4:62595614-62595633 | Msa0176290:CDS | 30.0% | |
! | CTAAAATCAATGGGGATTTT+TGG | + | chr1_4:62595623-62595642 | Msa0176290:CDS | 30.0% |
!!! | ATTTTTGGTTTCAAAAGGGT+TGG | + | chr1_4:62595638-62595657 | Msa0176290:CDS | 30.0% |
ACACATTATTCACTAGATCA+TGG | + | chr1_4:62595673-62595692 | Msa0176290:CDS | 30.0% | |
CACATTATTCACTAGATCAT+GGG | + | chr1_4:62595674-62595693 | Msa0176290:CDS | 30.0% | |
! | TGAAGAAAACTCTCATTTTG+TGG | + | chr1_4:62595717-62595736 | Msa0176290:CDS | 30.0% |
GAAAGGATATTCAATCTCAA+GGG | - | chr1_4:62595764-62595783 | None:intergenic | 30.0% | |
!!! | TCATGTTGATTTTCATGGAA+AGG | - | chr1_4:62595781-62595800 | None:intergenic | 30.0% |
! | TGACTTGTCCAAAATTTCAA+TGG | - | chr1_4:62595842-62595861 | None:intergenic | 30.0% |
TCACTTCTCAATTTCTTATG+TGG | - | chr1_4:62595916-62595935 | None:intergenic | 30.0% | |
CATAAAATGTACCACTAGAT+TGG | - | chr1_4:62595996-62596015 | None:intergenic | 30.0% | |
! | TATGTTGTTCATTTTCCTAG+AGG | + | chr1_4:62596083-62596102 | Msa0176290:intron | 30.0% |
AATTAATCAAAGACTCACCA+AGG | - | chr1_4:62596274-62596293 | None:intergenic | 30.0% | |
!! | TGTTCCATACACTTTGATTT+TGG | - | chr1_4:62596473-62596492 | None:intergenic | 30.0% |
! | TTACTCATCATATAGTGGAA+CGG | - | chr1_4:62596611-62596630 | None:intergenic | 30.0% |
TAACGTTACTCATCATATAG+TGG | - | chr1_4:62596616-62596635 | None:intergenic | 30.0% | |
CGTTACAAAAGAGATTTCAA+TGG | + | chr1_4:62596631-62596650 | Msa0176290:intron | 30.0% | |
TTTGTATAGAGTTTGTCTCT+TGG | - | chr1_4:62596776-62596795 | None:intergenic | 30.0% | |
AGGGTTTAGAAATCAAACTA+GGG | - | chr1_4:62596799-62596818 | None:intergenic | 30.0% | |
AAGGGTTTAGAAATCAAACT+AGG | - | chr1_4:62596800-62596819 | None:intergenic | 30.0% | |
!! | ACTATTTTGAGAGAGATAGA+GGG | - | chr1_4:62596832-62596851 | None:intergenic | 30.0% |
TCTCAAAATAGTCTGATACA+AGG | + | chr1_4:62596840-62596859 | Msa0176290:intron | 30.0% | |
! | TGTTTGCTGAAAGTACAAAT+CGG | - | chr1_4:62597049-62597068 | None:intergenic | 30.0% |
! | CTTTCAGCAAACATCAATTT+TGG | + | chr1_4:62597056-62597075 | Msa0176290:intron | 30.0% |
TTGTGAAAGTGACTCAAAAT+TGG | - | chr1_4:62597092-62597111 | None:intergenic | 30.0% | |
CTAAAATTCCTTGAGTAGTT+TGG | - | chr1_4:62597275-62597294 | None:intergenic | 30.0% | |
! | CAAACTACTCAAGGAATTTT+AGG | + | chr1_4:62597273-62597292 | Msa0176290:intron | 30.0% |
TAAGAATACTCATGATCTAC+CGG | - | chr1_4:62597893-62597912 | None:intergenic | 30.0% | |
! | CAACAAAATCATTGGTGATT+TGG | - | chr1_4:62598074-62598093 | None:intergenic | 30.0% |
ATTCAGGATGGTAAAGTTAA+AGG | - | chr1_4:62598122-62598141 | None:intergenic | 30.0% | |
ACAACTTTACTTATTCAGGA+TGG | - | chr1_4:62598134-62598153 | None:intergenic | 30.0% | |
AGCAACAACTTTACTTATTC+AGG | - | chr1_4:62598138-62598157 | None:intergenic | 30.0% | |
AAAGGATAATCAAGTACCAT+GGG | - | chr1_4:62598463-62598482 | None:intergenic | 30.0% | |
! | TCTACACATCAAGTTGTTAT+TGG | - | chr1_4:62598540-62598559 | None:intergenic | 30.0% |
!! | TGTTCCATACACTTTGATTT+TGG | - | chr1_4:62596473-62596492 | None:intergenic | 30.0% |
! | TTACTCATCATATAGTGGAA+CGG | - | chr1_4:62596611-62596630 | None:intergenic | 30.0% |
TAACGTTACTCATCATATAG+TGG | - | chr1_4:62596616-62596635 | None:intergenic | 30.0% | |
CGTTACAAAAGAGATTTCAA+TGG | + | chr1_4:62596631-62596650 | Msa0176290:intron | 30.0% | |
TTTGTATAGAGTTTGTCTCT+TGG | - | chr1_4:62596776-62596795 | None:intergenic | 30.0% | |
AGGGTTTAGAAATCAAACTA+GGG | - | chr1_4:62596799-62596818 | None:intergenic | 30.0% | |
AAGGGTTTAGAAATCAAACT+AGG | - | chr1_4:62596800-62596819 | None:intergenic | 30.0% | |
!! | ACTATTTTGAGAGAGATAGA+GGG | - | chr1_4:62596832-62596851 | None:intergenic | 30.0% |
TCTCAAAATAGTCTGATACA+AGG | + | chr1_4:62596840-62596859 | Msa0176290:intron | 30.0% | |
! | TGTTTGCTGAAAGTACAAAT+CGG | - | chr1_4:62597049-62597068 | None:intergenic | 30.0% |
! | CTTTCAGCAAACATCAATTT+TGG | + | chr1_4:62597056-62597075 | Msa0176290:intron | 30.0% |
TTGTGAAAGTGACTCAAAAT+TGG | - | chr1_4:62597092-62597111 | None:intergenic | 30.0% | |
GATTGTTAGCAAATTGTGAT+GGG | - | chr1_4:62599311-62599330 | None:intergenic | 30.0% | |
TGATTGTTAGCAAATTGTGA+TGG | - | chr1_4:62599312-62599331 | None:intergenic | 30.0% | |
! | TGGGATGCTAAATATTTTTC+TGG | + | chr1_4:62599384-62599403 | Msa0176290:CDS | 30.0% |
!! | TTTTCTGGAAGAATTAAAGG+TGG | + | chr1_4:62599399-62599418 | Msa0176290:CDS | 30.0% |
! | GTACACAACAAGTTGAAAAT+TGG | + | chr1_4:62599438-62599457 | Msa0176290:CDS | 30.0% |
! | ACACAACAAGTTGAAAATTG+GGG | + | chr1_4:62599440-62599459 | Msa0176290:CDS | 30.0% |
!!! | GGTAATCCAATACCTTTTTT+TGG | + | chr1_4:62599558-62599577 | Msa0176290:intron | 30.0% |
! | ACATCTCCAAAAAAAGGTAT+TGG | - | chr1_4:62599567-62599586 | None:intergenic | 30.0% |
AAACACACATCTCCAAAAAA+AGG | - | chr1_4:62599573-62599592 | None:intergenic | 30.0% | |
ATAGTAACTCTTTGAGTAGT+TGG | + | chr1_4:62599772-62599791 | Msa0176290:intron | 30.0% | |
TAGTAACTCTTTGAGTAGTT+GGG | + | chr1_4:62599773-62599792 | Msa0176290:intron | 30.0% | |
! | GATTCCTCAAAATTTGTTTG+CGG | - | chr1_4:62599827-62599846 | None:intergenic | 30.0% |
!! | CTCCAAATATCCATTTTTCA+AGG | + | chr1_4:62599971-62599990 | Msa0176290:CDS | 30.0% |
GACCTTGAAAAATGGATATT+TGG | - | chr1_4:62599976-62599995 | None:intergenic | 30.0% | |
AATATTATGCCAAATCAACG+AGG | + | chr1_4:62599996-62600015 | Msa0176290:CDS | 30.0% | |
ATATTATGCCAAATCAACGA+GGG | + | chr1_4:62599997-62600016 | Msa0176290:CDS | 30.0% | |
!! | GAAAGTATAACAGCACTTTT+TGG | - | chr1_4:62600096-62600115 | None:intergenic | 30.0% |
GAATAACAATGCAACTTTAC+AGG | - | chr1_4:62600236-62600255 | None:intergenic | 30.0% | |
TGTTATTCCAACATGAAATC+AGG | + | chr1_4:62600248-62600267 | Msa0176290:CDS | 30.0% | |
GTAGTACAGCACAATTATTA+TGG | - | chr1_4:62600419-62600438 | None:intergenic | 30.0% | |
! | TTTGAGTTAAGAGAAATGCT+AGG | - | chr1_4:62600801-62600820 | None:intergenic | 30.0% |
!! | GATATAAATAGTGGATGACT+CGG | - | chr1_4:62601038-62601057 | None:intergenic | 30.0% |
TGTTGAAAAGACATAATGCT+TGG | - | chr1_4:62601169-62601188 | None:intergenic | 30.0% | |
ACTCACGAAGTTCAATATTT+AGG | - | chr1_4:62601246-62601265 | None:intergenic | 30.0% | |
! | ACACATTTTTCCTTCATTCA+TGG | + | chr1_4:62601388-62601407 | Msa0176290:intron | 30.0% |
ATTACTAGTTCGATCTAAGT+TGG | + | chr1_4:62601610-62601629 | Msa0176290:intron | 30.0% | |
TTTGGAAGTTTAAGGGATAT+TGG | - | chr1_4:62601715-62601734 | None:intergenic | 30.0% | |
!! | AACCTGATTTGGAAGTTTAA+GGG | - | chr1_4:62601722-62601741 | None:intergenic | 30.0% |
TACAACGCGATTATGATATT+TGG | + | chr1_4:62601761-62601780 | Msa0176290:CDS | 30.0% | |
ATGATATTTGGCTAGTGAAT+TGG | + | chr1_4:62601773-62601792 | Msa0176290:CDS | 30.0% | |
AGCTTTCCATCTTGAAGAAT+TGG | - | chr1_4:62594955-62594974 | None:intergenic | 35.0% | |
AATCTATTCCCATTTCCGAA+GGG | - | chr1_4:62595176-62595195 | None:intergenic | 35.0% | |
TAATCTATTCCCATTTCCGA+AGG | - | chr1_4:62595177-62595196 | None:intergenic | 35.0% | |
GATACCAAAAGGTTTCACTA+AGG | + | chr1_4:62595528-62595547 | Msa0176290:CDS | 35.0% | |
! | ATTTCCCAATTTTTGCCATC+TGG | - | chr1_4:62595595-62595614 | None:intergenic | 35.0% |
GAGTACGACTAAAATCAATG+GGG | + | chr1_4:62595615-62595634 | Msa0176290:CDS | 35.0% | |
!!! | TGGGGATTTTTGGTTTCAAA+AGG | + | chr1_4:62595633-62595652 | Msa0176290:CDS | 35.0% |
!!! | GGGGATTTTTGGTTTCAAAA+GGG | + | chr1_4:62595634-62595653 | Msa0176290:CDS | 35.0% |
GGAAAGGATATTCAATCTCA+AGG | - | chr1_4:62595765-62595784 | None:intergenic | 35.0% | |
TGATCAACAAAGTAGTGATG+AGG | + | chr1_4:62595813-62595832 | Msa0176290:CDS | 35.0% | |
! | TGAGGACTCCATTGAAATTT+TGG | + | chr1_4:62595831-62595850 | Msa0176290:CDS | 35.0% |
!! | CTAGTTTTCTTCTTGCATGA+AGG | - | chr1_4:62595865-62595884 | None:intergenic | 35.0% |
!! | GGACACATAATTGGTGATTT+TGG | - | chr1_4:62595889-62595908 | None:intergenic | 35.0% |
CTCAATTTCTTATGTGGTTG+AGG | - | chr1_4:62595910-62595929 | None:intergenic | 35.0% | |
! | GTTCATTTTCCTAGAGGATA+CGG | + | chr1_4:62596089-62596108 | Msa0176290:intron | 35.0% |
! | TTCATTTTCCTAGAGGATAC+GGG | + | chr1_4:62596090-62596109 | Msa0176290:intron | 35.0% |
TTCATGGTAATCCTGAAAGA+AGG | - | chr1_4:62596228-62596247 | None:intergenic | 35.0% | |
ACCAATAACAACTTGATGTG+TGG | + | chr1_4:62596427-62596446 | Msa0176290:intron | 35.0% | |
! | TCCACACATCAAGTTGTTAT+TGG | - | chr1_4:62596431-62596450 | None:intergenic | 35.0% |
GCAACCAAAATCAAAGTGTA+TGG | + | chr1_4:62596466-62596485 | Msa0176290:intron | 35.0% | |
!!! | TCGCTGTTGTTTTCTACTTT+TGG | - | chr1_4:62596507-62596526 | None:intergenic | 35.0% |
GAAAACAACAGCGAGAAAAA+AGG | + | chr1_4:62596513-62596532 | Msa0176290:intron | 35.0% | |
AAGAATCTGTTTACCCAGTT+CGG | + | chr1_4:62596549-62596568 | Msa0176290:intron | 35.0% | |
ACTATTAGGATTGAGTCTCT+TGG | - | chr1_4:62596713-62596732 | None:intergenic | 35.0% | |
AATCCTAATAGTGTTTCCCA+AGG | + | chr1_4:62596721-62596740 | Msa0176290:intron | 35.0% | |
! | TTTGAAGGTTGATTCACCTT+GGG | - | chr1_4:62596740-62596759 | None:intergenic | 35.0% |
!! | TATTTTGAGAGAGATAGAGG+GGG | - | chr1_4:62596830-62596849 | None:intergenic | 35.0% |
!! | CTATTTTGAGAGAGATAGAG+GGG | - | chr1_4:62596831-62596850 | None:intergenic | 35.0% |
!! | GACTATTTTGAGAGAGATAG+AGG | - | chr1_4:62596833-62596852 | None:intergenic | 35.0% |
AAAATAACAGCACGCGAAAT+CGG | + | chr1_4:62596930-62596949 | Msa0176290:intron | 35.0% | |
AGTGACTCAAAATTGGAGTT+TGG | - | chr1_4:62597085-62597104 | None:intergenic | 35.0% | |
! | TCATCACTAATTTGGAGTCA+AGG | - | chr1_4:62597124-62597143 | None:intergenic | 35.0% |
AATGGGCATCATCACTAATT+TGG | - | chr1_4:62597132-62597151 | None:intergenic | 35.0% | |
!! | GCAAGGTGTTGATGTTAAAT+GGG | - | chr1_4:62597149-62597168 | None:intergenic | 35.0% |
!! | AGCAAGGTGTTGATGTTAAA+TGG | - | chr1_4:62597150-62597169 | None:intergenic | 35.0% |
ACCCTAATCTCTTCAATCAT+CGG | + | chr1_4:62597217-62597236 | Msa0176290:intron | 35.0% | |
TCCGATGATTGAAGAGATTA+GGG | - | chr1_4:62597221-62597240 | None:intergenic | 35.0% | |
TTCCGATGATTGAAGAGATT+AGG | - | chr1_4:62597222-62597241 | None:intergenic | 35.0% | |
CTGAAATTCCTAGTGTAGTT+TGG | - | chr1_4:62597371-62597390 | None:intergenic | 35.0% | |
CAAACTACACTAGGAATTTC+AGG | + | chr1_4:62597369-62597388 | Msa0176290:intron | 35.0% | |
! | TGGATTACTCTAAAAGCCAA+GGG | - | chr1_4:62597473-62597492 | None:intergenic | 35.0% |
GAATTACCCTAAAAGTCCAA+GGG | - | chr1_4:62597663-62597682 | None:intergenic | 35.0% | |
AGGTTGAAGAATGTATAGCA+CGG | - | chr1_4:62597692-62597711 | None:intergenic | 35.0% | |
! | AAGGGTTTTCTTCATGAAGA+CGG | - | chr1_4:62597727-62597746 | None:intergenic | 35.0% |
GTGGAGTTCAACAAAATCAT+TGG | - | chr1_4:62598082-62598101 | None:intergenic | 35.0% | |
!!! | AGTTTTGAGAGAAGCAACAA+AGG | - | chr1_4:62598239-62598258 | None:intergenic | 35.0% |
!! | AAGTGTGAGAAAGCTTTGAA+GGG | - | chr1_4:62598355-62598374 | None:intergenic | 35.0% |
! | AAAGTGTGAGAAAGCTTTGA+AGG | - | chr1_4:62598356-62598375 | None:intergenic | 35.0% |
!!! | TAACGATTTTGGGTTATGGA+AGG | - | chr1_4:62598407-62598426 | None:intergenic | 35.0% |
TGGGATATTGAGAAGTTTAC+CGG | - | chr1_4:62598433-62598452 | None:intergenic | 35.0% | |
CAAAGGATAATCAAGTACCA+TGG | - | chr1_4:62598464-62598483 | None:intergenic | 35.0% | |
TTCATCGAATTCGCAACAAT+TGG | - | chr1_4:62598508-62598527 | None:intergenic | 35.0% | |
GCAACCAAAATCAAAGTGTA+TGG | + | chr1_4:62596466-62596485 | Msa0176290:intron | 35.0% | |
!!! | TCGCTGTTGTTTTCTACTTT+TGG | - | chr1_4:62596507-62596526 | None:intergenic | 35.0% |
GAAAACAACAGCGAGAAAAA+AGG | + | chr1_4:62596513-62596532 | Msa0176290:intron | 35.0% | |
AAGAATCTGTTTACCCAGTT+CGG | + | chr1_4:62596549-62596568 | Msa0176290:intron | 35.0% | |
ACTATTAGGATTGAGTCTCT+TGG | - | chr1_4:62596713-62596732 | None:intergenic | 35.0% | |
AATCCTAATAGTGTTTCCCA+AGG | + | chr1_4:62596721-62596740 | Msa0176290:intron | 35.0% | |
! | TTTGAAGGTTGATTCACCTT+GGG | - | chr1_4:62596740-62596759 | None:intergenic | 35.0% |
!! | TATTTTGAGAGAGATAGAGG+GGG | - | chr1_4:62596830-62596849 | None:intergenic | 35.0% |
!! | CTATTTTGAGAGAGATAGAG+GGG | - | chr1_4:62596831-62596850 | None:intergenic | 35.0% |
!! | GACTATTTTGAGAGAGATAG+AGG | - | chr1_4:62596833-62596852 | None:intergenic | 35.0% |
AAAATAACAGCACGCGAAAT+CGG | + | chr1_4:62596930-62596949 | Msa0176290:intron | 35.0% | |
AGTGACTCAAAATTGGAGTT+TGG | - | chr1_4:62597085-62597104 | None:intergenic | 35.0% | |
!! | TTTTGAGTCACTTTCACAAC+AGG | + | chr1_4:62597093-62597112 | Msa0176290:intron | 35.0% |
! | TTTGAGTCACTTTCACAACA+GGG | + | chr1_4:62597094-62597113 | Msa0176290:intron | 35.0% |
! | ACAGGGAGTATACTAGTAAT+TGG | + | chr1_4:62599220-62599239 | Msa0176290:intron | 35.0% |
TGACATTCTTCTTCAACTCT+TGG | + | chr1_4:62599350-62599369 | Msa0176290:CDS | 35.0% | |
ATTCTTCTTCAACTCTTGGA+TGG | + | chr1_4:62599354-62599373 | Msa0176290:CDS | 35.0% | |
TTCTTCTTCAACTCTTGGAT+GGG | + | chr1_4:62599355-62599374 | Msa0176290:CDS | 35.0% | |
!!! | CAAAGTAAGGTATTGGCTTT+TGG | - | chr1_4:62599487-62599506 | None:intergenic | 35.0% |
TTGGATTACCTTGATGTAGA+GGG | - | chr1_4:62599548-62599567 | None:intergenic | 35.0% | |
ATTGGATTACCTTGATGTAG+AGG | - | chr1_4:62599549-62599568 | None:intergenic | 35.0% | |
TCAAAGAGACAAAGACTTCT+CGG | + | chr1_4:62599671-62599690 | Msa0176290:CDS | 35.0% | |
AACATCGATGTTCTGACATA+TGG | + | chr1_4:62599736-62599755 | Msa0176290:intron | 35.0% | |
CAACCCAAAAAACTTCATTG+CGG | + | chr1_4:62599895-62599914 | Msa0176290:CDS | 35.0% | |
!!! | TGTCCGCAATGAAGTTTTTT+GGG | - | chr1_4:62599901-62599920 | None:intergenic | 35.0% |
!!! | TTGTCCGCAATGAAGTTTTT+TGG | - | chr1_4:62599902-62599921 | None:intergenic | 35.0% |
AAAAACTTCATTGCGGACAA+AGG | + | chr1_4:62599902-62599921 | Msa0176290:CDS | 35.0% | |
TGGAGTTGAATTTATCAGCT+TGG | - | chr1_4:62599956-62599975 | None:intergenic | 35.0% | |
! | AGATGGTGATGTTAAAGTCT+GGG | + | chr1_4:62600198-62600217 | Msa0176290:CDS | 35.0% |
TAAAGTCTGGGAAGAAATTG+TGG | + | chr1_4:62600210-62600229 | Msa0176290:CDS | 35.0% | |
!! | TAGAGGTTGGAAGCTATTTT+GGG | + | chr1_4:62600280-62600299 | Msa0176290:CDS | 35.0% |
!! | TGTTTTTGAGCTCATCAAGA+GGG | + | chr1_4:62600334-62600353 | Msa0176290:CDS | 35.0% |
GTGTTATAGAGTGTGTCAAA+AGG | - | chr1_4:62600647-62600666 | None:intergenic | 35.0% | |
! | GTGGTTTCACACTTTAGAAA+TGG | + | chr1_4:62600693-62600712 | Msa0176290:intron | 35.0% |
!! | GTCGTTTTCACATATAAGAC+CGG | + | chr1_4:62600831-62600850 | Msa0176290:intron | 35.0% |
! | TCGTTTTCACATATAAGACC+GGG | + | chr1_4:62600832-62600851 | Msa0176290:intron | 35.0% |
AATCCATGTTCTCATCTGTA+TGG | + | chr1_4:62600884-62600903 | Msa0176290:intron | 35.0% | |
GTTATGTGTGACTTCTTGTA+AGG | + | chr1_4:62600922-62600941 | Msa0176290:intron | 35.0% | |
TGTTAAACTCGTGTTGAACA+TGG | - | chr1_4:62601067-62601086 | None:intergenic | 35.0% | |
! | ATGTCTTTTCAACAACACAC+CGG | + | chr1_4:62601175-62601194 | Msa0176290:intron | 35.0% |
AAATGAAATGGTACTCGTTG+AGG | - | chr1_4:62601350-62601369 | None:intergenic | 35.0% | |
CAGATTGAAGCAAATTGAGT+TGG | - | chr1_4:62601449-62601468 | None:intergenic | 35.0% | |
! | CAACTCAATTTGCTTCAATC+TGG | + | chr1_4:62601447-62601466 | Msa0176290:intron | 35.0% |
ATCCCTTAAACTTCCAAATC+AGG | + | chr1_4:62601717-62601736 | Msa0176290:CDS | 35.0% | |
!! | CAACCTGATTTGGAAGTTTA+AGG | - | chr1_4:62601723-62601742 | None:intergenic | 35.0% |
! | ATTTTGCACTCAACCTGATT+TGG | - | chr1_4:62601733-62601752 | None:intergenic | 35.0% |
! | AGGTTGAGTGCAAAATGTTT+TGG | + | chr1_4:62601737-62601756 | Msa0176290:CDS | 35.0% |
! | GGTTGAGTGCAAAATGTTTT+GGG | + | chr1_4:62601738-62601757 | Msa0176290:CDS | 35.0% |
! | AGTGATATTTCTACACCTCA+AGG | + | chr1_4:62601994-62602013 | Msa0176290:CDS | 35.0% |
! | GTGATATTTCTACACCTCAA+GGG | + | chr1_4:62601995-62602014 | Msa0176290:CDS | 35.0% |
ACGAATAGTAGAAGCAGAGA+GGG | - | chr1_4:62594911-62594930 | None:intergenic | 40.0% | |
AACGAATAGTAGAAGCAGAG+AGG | - | chr1_4:62594912-62594931 | None:intergenic | 40.0% | |
ACCACACCAATTCTTCAAGA+TGG | + | chr1_4:62594946-62594965 | Msa0176290:CDS | 40.0% | |
TCCATCTTGAAGAATTGGTG+TGG | - | chr1_4:62594950-62594969 | None:intergenic | 40.0% | |
GGTTATTCGACCCATCTTTA+GGG | - | chr1_4:62595209-62595228 | None:intergenic | 40.0% | |
TTGGTATCATCTACAACGCA+TGG | - | chr1_4:62595516-62595535 | None:intergenic | 40.0% | |
GCGTTGTAGATGATACCAAA+AGG | + | chr1_4:62595517-62595536 | Msa0176290:intron | 40.0% | |
! | TGGTCCTTAGTGAAACCTTT+TGG | - | chr1_4:62595535-62595554 | None:intergenic | 40.0% |
! | TCTGGAGTCTTGAGAAACAT+TGG | - | chr1_4:62595577-62595596 | None:intergenic | 40.0% |
ATGTTTCTCAAGACTCCAGA+TGG | + | chr1_4:62595577-62595596 | Msa0176290:CDS | 40.0% | |
AGACTCCAGATGGCAAAAAT+TGG | + | chr1_4:62595587-62595606 | Msa0176290:CDS | 40.0% | |
GACTCCAGATGGCAAAAATT+GGG | + | chr1_4:62595588-62595607 | Msa0176290:CDS | 40.0% | |
TGTGGTTGAGGACACATAAT+TGG | - | chr1_4:62595898-62595917 | None:intergenic | 40.0% | |
TTGAGAAGTGACTCAAGTGA+AGG | + | chr1_4:62595925-62595944 | Msa0176290:CDS | 40.0% | |
CTAGATTGGACATGATGCTT+AGG | - | chr1_4:62595982-62596001 | None:intergenic | 40.0% | |
AAGCATCATGTCCAATCTAG+TGG | + | chr1_4:62595982-62596001 | Msa0176290:CDS | 40.0% | |
!! | CTAGCTCGTGCTTTACTTTT+CGG | - | chr1_4:62596131-62596150 | None:intergenic | 40.0% |
CAAAAAGCAATACCAAGAGC+AGG | + | chr1_4:62596164-62596183 | Msa0176290:CDS | 40.0% | |
TATTTAACTGCTCCTGCTCT+TGG | - | chr1_4:62596179-62596198 | None:intergenic | 40.0% | |
! | TCATCATATAGTGGAACGGA+GGG | - | chr1_4:62596607-62596626 | None:intergenic | 40.0% |
AGGATTGAGTCTCTTGGTTA+CGG | - | chr1_4:62596707-62596726 | None:intergenic | 40.0% | |
TCACCTTGGGAAACACTATT+AGG | - | chr1_4:62596727-62596746 | None:intergenic | 40.0% | |
! | GTTTGAAGGTTGATTCACCT+TGG | - | chr1_4:62596741-62596760 | None:intergenic | 40.0% |
TGTCTCTTGGCAACAAACTA+GGG | - | chr1_4:62596763-62596782 | None:intergenic | 40.0% | |
TTGTCTCTTGGCAACAAACT+AGG | - | chr1_4:62596764-62596783 | None:intergenic | 40.0% | |
GCTTTCTGTTCGGGAAAAAT+CGG | - | chr1_4:62596979-62596998 | None:intergenic | 40.0% | |
! | TTGCTGAAAGTACAAATCGG+TGG | - | chr1_4:62597046-62597065 | None:intergenic | 40.0% |
GACTCAAAATTGGAGTTTGG+AGG | - | chr1_4:62597082-62597101 | None:intergenic | 40.0% | |
! | TCACTAATTTGGAGTCAAGG+TGG | - | chr1_4:62597121-62597140 | None:intergenic | 40.0% |
TGGACACAAGGATCTTCAAA+GGG | - | chr1_4:62597255-62597274 | None:intergenic | 40.0% | |
TTGGACACAAGGATCTTCAA+AGG | - | chr1_4:62597256-62597275 | None:intergenic | 40.0% | |
CCTAGTGTAGTTTGGATACA+AGG | - | chr1_4:62597363-62597382 | None:intergenic | 40.0% | |
CCTTGTATCCAAACTACACT+AGG | + | chr1_4:62597360-62597379 | Msa0176290:intron | 40.0% | |
TGTCTCGTATTGAAGAGGTA+TGG | - | chr1_4:62597413-62597432 | None:intergenic | 40.0% | |
AAGTAGATCTTCAAGGAAGC+GGG | - | chr1_4:62597439-62597458 | None:intergenic | 40.0% | |
CAAGTAGATCTTCAAGGAAG+CGG | - | chr1_4:62597440-62597459 | None:intergenic | 40.0% | |
TGGGAACAAGTAGATCTTCA+AGG | - | chr1_4:62597446-62597465 | None:intergenic | 40.0% | |
TCTAAAAGCCAAGGGTGATT+GGG | - | chr1_4:62597465-62597484 | None:intergenic | 40.0% | |
! | GTGGATTACTCTAAAAGCCA+AGG | - | chr1_4:62597474-62597493 | None:intergenic | 40.0% |
CCTAAAACTCCTAGTGTAGT+TGG | - | chr1_4:62597562-62597581 | None:intergenic | 40.0% | |
! | CCAACTACACTAGGAGTTTT+AGG | + | chr1_4:62597559-62597578 | Msa0176290:intron | 40.0% |
TGTCTCGTATTGAAGAGGTA+TGG | - | chr1_4:62597413-62597432 | None:intergenic | 40.0% | |
! | CAATCACCCTTGGACTTTTA+GGG | + | chr1_4:62597654-62597673 | Msa0176290:intron | 40.0% |
GGAATTACCCTAAAAGTCCA+AGG | - | chr1_4:62597664-62597683 | None:intergenic | 40.0% | |
GCTATACATTCTTCAACCTC+CGG | + | chr1_4:62597693-62597712 | Msa0176290:intron | 40.0% | |
! | GTTTTCTTCATGAAGACGGA+AGG | - | chr1_4:62597723-62597742 | None:intergenic | 40.0% |
! | TCATTTGCTAGTTGAGAGGT+TGG | - | chr1_4:62597832-62597851 | None:intergenic | 40.0% |
! | GTACTCATTTGCTAGTTGAG+AGG | - | chr1_4:62597836-62597855 | None:intergenic | 40.0% |
AGGTTCAAGGAAGACATAGT+GGG | - | chr1_4:62597861-62597880 | None:intergenic | 40.0% | |
TTAAACACTCAACATCAGCC+TGG | - | chr1_4:62597927-62597946 | None:intergenic | 40.0% | |
! | TGGTGATTTGGAGAACATTG+AGG | - | chr1_4:62598062-62598081 | None:intergenic | 40.0% |
CTCTCAAAACTTTATCTCCG+AGG | + | chr1_4:62598248-62598267 | Msa0176290:intron | 40.0% | |
ATGGAAGGTAAAGATGGAAG+CGG | - | chr1_4:62598392-62598411 | None:intergenic | 40.0% | |
TGGGTTATGGAAGGTAAAGA+TGG | - | chr1_4:62598398-62598417 | None:intergenic | 40.0% | |
!!! | GCGATAACGATTTTGGGTTA+TGG | - | chr1_4:62598411-62598430 | None:intergenic | 40.0% |
TAACCCAAAATCGTTATCGC+CGG | + | chr1_4:62598411-62598430 | Msa0176290:intron | 40.0% | |
! | TTACCGGCGATAACGATTTT+GGG | - | chr1_4:62598417-62598436 | None:intergenic | 40.0% |
! | TTTACCGGCGATAACGATTT+TGG | - | chr1_4:62598418-62598437 | None:intergenic | 40.0% |
ACAACTTGATGTGTAGAGCA+AGG | + | chr1_4:62598543-62598562 | Msa0176290:intron | 40.0% | |
CAACTTGATGTGTAGAGCAA+GGG | + | chr1_4:62598544-62598563 | Msa0176290:intron | 40.0% | |
! | TCATCATATAGTGGAACGGA+GGG | - | chr1_4:62596607-62596626 | None:intergenic | 40.0% |
AGGATTGAGTCTCTTGGTTA+CGG | - | chr1_4:62596707-62596726 | None:intergenic | 40.0% | |
TCACCTTGGGAAACACTATT+AGG | - | chr1_4:62596727-62596746 | None:intergenic | 40.0% | |
! | GTTTGAAGGTTGATTCACCT+TGG | - | chr1_4:62596741-62596760 | None:intergenic | 40.0% |
TGTCTCTTGGCAACAAACTA+GGG | - | chr1_4:62596763-62596782 | None:intergenic | 40.0% | |
TTGTCTCTTGGCAACAAACT+AGG | - | chr1_4:62596764-62596783 | None:intergenic | 40.0% | |
GCTTTCTGTTCGGGAAAAAT+CGG | - | chr1_4:62596979-62596998 | None:intergenic | 40.0% | |
! | TTGCTGAAAGTACAAATCGG+TGG | - | chr1_4:62597046-62597065 | None:intergenic | 40.0% |
GACTCAAAATTGGAGTTTGG+AGG | - | chr1_4:62597082-62597101 | None:intergenic | 40.0% | |
CTGGAAGAATTAAAGGTGGA+TGG | + | chr1_4:62599403-62599422 | Msa0176290:CDS | 40.0% | |
TGGATTACCTTGATGTAGAG+GGG | - | chr1_4:62599547-62599566 | None:intergenic | 40.0% | |
CTTGGATAACAAGGAACAGA+TGG | + | chr1_4:62600181-62600200 | Msa0176290:CDS | 40.0% | |
! | CAGATGGTGATGTTAAAGTC+TGG | + | chr1_4:62600197-62600216 | Msa0176290:CDS | 40.0% |
! | AAACTGGCCTGATTTCATGT+TGG | - | chr1_4:62600258-62600277 | None:intergenic | 40.0% |
!! | AAATCAGGCCAGTTTTGTAG+AGG | + | chr1_4:62600263-62600282 | Msa0176290:CDS | 40.0% |
! | GTAGAGGTTGGAAGCTATTT+TGG | + | chr1_4:62600279-62600298 | Msa0176290:CDS | 40.0% |
!! | GTGTTTTTGAGCTCATCAAG+AGG | + | chr1_4:62600333-62600352 | Msa0176290:CDS | 40.0% |
! | GCAATTGAGATTTGAAGCTG+TGG | + | chr1_4:62600390-62600409 | Msa0176290:intron | 40.0% |
TTTCACAACAAGCAGCACAT+GGG | + | chr1_4:62600515-62600534 | Msa0176290:intron | 40.0% | |
AAATGGATCCCACGTAAAGT+GGG | + | chr1_4:62600710-62600729 | Msa0176290:intron | 40.0% | |
!! | TGTATTCCACTTTTGACTCC+CGG | - | chr1_4:62600853-62600872 | None:intergenic | 40.0% |
ACACCATACAGATGAGAACA+TGG | - | chr1_4:62600890-62600909 | None:intergenic | 40.0% | |
CTCGTGTTGAACATGGTATA+TGG | - | chr1_4:62601060-62601079 | None:intergenic | 40.0% | |
! | CTCAATTTGCTTCAATCTGG+TGG | + | chr1_4:62601450-62601469 | Msa0176290:intron | 40.0% |
TGTGTTTGCAGATGATTCCA+AGG | + | chr1_4:62601653-62601672 | Msa0176290:intron | 40.0% | |
AAAGATTTGCACGATCGCTT+AGG | + | chr1_4:62601797-62601816 | Msa0176290:CDS | 40.0% | |
TTGTCAATGTTTGTCCCTTG+AGG | - | chr1_4:62602012-62602031 | None:intergenic | 40.0% | |
TCAACCCAGCAAAAAATCAC+AGG | + | chr1_4:62602051-62602070 | Msa0176290:CDS | 40.0% | |
!!! | CTTGCCTGTGATTTTTTGCT+GGG | - | chr1_4:62602058-62602077 | None:intergenic | 40.0% |
!!! | ACTTGCCTGTGATTTTTTGC+TGG | - | chr1_4:62602059-62602078 | None:intergenic | 40.0% |
GGGTTATTCGACCCATCTTT+AGG | - | chr1_4:62595210-62595229 | None:intergenic | 45.0% | |
TTCACTAGATCATGGGCACA+TGG | + | chr1_4:62595681-62595700 | Msa0176290:CDS | 45.0% | |
!! | TTCAATCTCAAGGGTGCTCT+TGG | - | chr1_4:62595755-62595774 | None:intergenic | 45.0% |
! | AGTGACTCAAGTGAAGGTGT+TGG | + | chr1_4:62595931-62595950 | Msa0176290:CDS | 45.0% |
! | CATGATGCTTAGGCAGGTTT+TGG | - | chr1_4:62595972-62595991 | None:intergenic | 45.0% |
ATTGGACATGATGCTTAGGC+AGG | - | chr1_4:62595978-62595997 | None:intergenic | 45.0% | |
ACAACTTGATGTGTGGAGCA+AGG | + | chr1_4:62596434-62596453 | Msa0176290:intron | 45.0% | |
CAACTTGATGTGTGGAGCAA+GGG | + | chr1_4:62596435-62596454 | Msa0176290:intron | 45.0% | |
AGGTCAATTTGGACCGAACT+GGG | - | chr1_4:62596565-62596584 | None:intergenic | 45.0% | |
TAGGTCAATTTGGACCGAAC+TGG | - | chr1_4:62596566-62596585 | None:intergenic | 45.0% | |
GGTCCAAATTGACCTAGTCT+GGG | + | chr1_4:62596570-62596589 | Msa0176290:intron | 45.0% | |
GTCCAAATTGACCTAGTCTG+GGG | + | chr1_4:62596571-62596590 | Msa0176290:intron | 45.0% | |
TCCAAATTGACCTAGTCTGG+GGG | + | chr1_4:62596572-62596591 | Msa0176290:intron | 45.0% | |
! | CTCATCATATAGTGGAACGG+AGG | - | chr1_4:62596608-62596627 | None:intergenic | 45.0% |
GGATTTGGGTAGAATTAGGC+GGG | - | chr1_4:62596674-62596693 | None:intergenic | 45.0% | |
GGGATTTGGGTAGAATTAGG+CGG | - | chr1_4:62596675-62596694 | None:intergenic | 45.0% | |
GCTGGGATTTGGGTAGAATT+AGG | - | chr1_4:62596678-62596697 | None:intergenic | 45.0% | |
GGATTGAGTCTCTTGGTTAC+GGG | - | chr1_4:62596706-62596725 | None:intergenic | 45.0% | |
GGCAACAAACTAGGGTTTGA+AGG | - | chr1_4:62596755-62596774 | None:intergenic | 45.0% | |
TTCTGTTCGGGAAAAATCGG+TGG | - | chr1_4:62596976-62596995 | None:intergenic | 45.0% | |
!! | TTTTGGGAGGCTTTCTGTTC+GGG | - | chr1_4:62596988-62597007 | None:intergenic | 45.0% |
!! | CTTTTGGGAGGCTTTCTGTT+CGG | - | chr1_4:62596989-62597008 | None:intergenic | 45.0% |
TCCCAAAAGGCAGCCAAAAT+CGG | + | chr1_4:62597000-62597019 | Msa0176290:intron | 45.0% | |
TGCAAACTTGTGGAGCTACT+TGG | - | chr1_4:62597198-62597217 | None:intergenic | 45.0% | |
GAGATTAGGGTGCAAACTTG+TGG | - | chr1_4:62597208-62597227 | None:intergenic | 45.0% | |
GGACACAAGGATCTTCAAAG+GGG | - | chr1_4:62597254-62597273 | None:intergenic | 45.0% | |
CCTTGAGTAGTTTGGACACA+AGG | - | chr1_4:62597267-62597286 | None:intergenic | 45.0% | |
CCTTGTGTCCAAACTACTCA+AGG | + | chr1_4:62597264-62597283 | Msa0176290:intron | 45.0% | |
GAGGTTAAGGTGTGTACTTG+TGG | - | chr1_4:62597304-62597323 | None:intergenic | 45.0% | |
ACCTTAACCTCTTCAGCCAT+CGG | + | chr1_4:62597313-62597332 | Msa0176290:intron | 45.0% | |
TACAAGGATCTTCGAGAAGG+CGG | - | chr1_4:62597347-62597366 | None:intergenic | 45.0% | |
GGATACAAGGATCTTCGAGA+AGG | - | chr1_4:62597350-62597369 | None:intergenic | 45.0% | |
GGAGATGTCTCGTATTGAAG+AGG | - | chr1_4:62597418-62597437 | None:intergenic | 45.0% | |
TACTTGTTCCCAATCACCCT+TGG | + | chr1_4:62597454-62597473 | Msa0176290:intron | 45.0% | |
! | CTCTAAAAGCCAAGGGTGAT+TGG | - | chr1_4:62597466-62597485 | None:intergenic | 45.0% |
AGGGTTGAGGTGTATACTTG+TGG | - | chr1_4:62597493-62597512 | None:intergenic | 45.0% | |
AGACATTCCAAGGGCTGAAA+GGG | - | chr1_4:62597512-62597531 | None:intergenic | 45.0% | |
AAGACATTCCAAGGGCTGAA+AGG | - | chr1_4:62597513-62597532 | None:intergenic | 45.0% | |
GAAGACGGAAGACATTCCAA+GGG | - | chr1_4:62597521-62597540 | None:intergenic | 45.0% | |
AGAAGACGGAAGACATTCCA+AGG | - | chr1_4:62597522-62597541 | None:intergenic | 45.0% | |
ATGTCTTCCGTCTTCTCGAA+AGG | + | chr1_4:62597526-62597545 | Msa0176290:intron | 45.0% | |
! | AGAGGTATGGTGAATGCTTG+TGG | - | chr1_4:62597590-62597609 | None:intergenic | 45.0% |
GGAGATGTCTCGTATTGAAG+AGG | - | chr1_4:62597418-62597437 | None:intergenic | 45.0% | |
AAGGTGATCTTCAAGGAAGC+GGG | - | chr1_4:62597629-62597648 | None:intergenic | 45.0% | |
CAAGGTGATCTTCAAGGAAG+CGG | - | chr1_4:62597630-62597649 | None:intergenic | 45.0% | |
TGGATGCAAGGTGATCTTCA+AGG | - | chr1_4:62597636-62597655 | None:intergenic | 45.0% | |
CCTAAAAGTCCAAGGGTGAT+TGG | - | chr1_4:62597656-62597675 | None:intergenic | 45.0% | |
! | CCAATCACCCTTGGACTTTT+AGG | + | chr1_4:62597653-62597672 | Msa0176290:intron | 45.0% |
AGAATGTATAGCACGGCTTG+TGG | - | chr1_4:62597685-62597704 | None:intergenic | 45.0% | |
TATGCTCTAGTGGTGAGCAA+GGG | - | chr1_4:62597745-62597764 | None:intergenic | 45.0% | |
TTAGGTGGAGTTGAACACAC+CGG | - | chr1_4:62597799-62597818 | None:intergenic | 45.0% | |
GAGGTTCAAGGAAGACATAG+TGG | - | chr1_4:62597862-62597881 | None:intergenic | 45.0% | |
! | TACTCATGATCTACCGGTTG+AGG | - | chr1_4:62597887-62597906 | None:intergenic | 45.0% |
TCCACTAGGCATCAATACCA+AGG | + | chr1_4:62597969-62597988 | Msa0176290:intron | 45.0% | |
!! | ACCTTGGTATTGATGCCTAG+TGG | - | chr1_4:62597973-62597992 | None:intergenic | 45.0% |
TTGGAGGATGAAGGTGATGT+TGG | - | chr1_4:62597998-62598017 | None:intergenic | 45.0% | |
!! | TGGTGTTGTTTGGAGGATGA+AGG | - | chr1_4:62598007-62598026 | None:intergenic | 45.0% |
!! | TCTGATGGTGTGGTGTTGTT+TGG | - | chr1_4:62598017-62598036 | None:intergenic | 45.0% |
AGAACATTGAGGTGCGTCTT+GGG | - | chr1_4:62598051-62598070 | None:intergenic | 45.0% | |
GGTAAAGTTAAAGGCCGTCA+TGG | - | chr1_4:62598113-62598132 | None:intergenic | 45.0% | |
! | TGACAAAGTCTTTGGCTCGT+CGG | - | chr1_4:62598171-62598190 | None:intergenic | 45.0% |
AGCAACAAAGGATACAACCG+CGG | - | chr1_4:62598227-62598246 | None:intergenic | 45.0% | |
!! | GAGAAAGCTTTGAAGGGTGA+AGG | - | chr1_4:62598349-62598368 | None:intergenic | 45.0% |
AATATCCCACTTCGAACCCA+TGG | + | chr1_4:62598444-62598463 | Msa0176290:intron | 45.0% | |
AAGTACCATGGGTTCGAAGT+GGG | - | chr1_4:62598452-62598471 | None:intergenic | 45.0% | |
AGGTCAATTTGGACCGAACT+GGG | - | chr1_4:62596565-62596584 | None:intergenic | 45.0% | |
TAGGTCAATTTGGACCGAAC+TGG | - | chr1_4:62596566-62596585 | None:intergenic | 45.0% | |
GGTCCAAATTGACCTAGTCT+GGG | + | chr1_4:62596570-62596589 | Msa0176290:intron | 45.0% | |
GTCCAAATTGACCTAGTCTG+GGG | + | chr1_4:62596571-62596590 | Msa0176290:intron | 45.0% | |
TCCAAATTGACCTAGTCTGG+GGG | + | chr1_4:62596572-62596591 | Msa0176290:intron | 45.0% | |
! | CTCATCATATAGTGGAACGG+AGG | - | chr1_4:62596608-62596627 | None:intergenic | 45.0% |
GGATTTGGGTAGAATTAGGC+GGG | - | chr1_4:62596674-62596693 | None:intergenic | 45.0% | |
GGGATTTGGGTAGAATTAGG+CGG | - | chr1_4:62596675-62596694 | None:intergenic | 45.0% | |
GCTGGGATTTGGGTAGAATT+AGG | - | chr1_4:62596678-62596697 | None:intergenic | 45.0% | |
GGATTGAGTCTCTTGGTTAC+GGG | - | chr1_4:62596706-62596725 | None:intergenic | 45.0% | |
GGCAACAAACTAGGGTTTGA+AGG | - | chr1_4:62596755-62596774 | None:intergenic | 45.0% | |
TTCTGTTCGGGAAAAATCGG+TGG | - | chr1_4:62596976-62596995 | None:intergenic | 45.0% | |
!! | TTTTGGGAGGCTTTCTGTTC+GGG | - | chr1_4:62596988-62597007 | None:intergenic | 45.0% |
!! | CTTTTGGGAGGCTTTCTGTT+CGG | - | chr1_4:62596989-62597008 | None:intergenic | 45.0% |
TCCCAAAAGGCAGCCAAAAT+CGG | + | chr1_4:62597000-62597019 | Msa0176290:intron | 45.0% | |
AACTCTTGGATGGGAGAGTT+TGG | + | chr1_4:62599364-62599383 | Msa0176290:CDS | 45.0% | |
ACTCTTGGATGGGAGAGTTT+GGG | + | chr1_4:62599365-62599384 | Msa0176290:CDS | 45.0% | |
! | TTGGGACTGATTTCTCTACG+AGG | + | chr1_4:62599791-62599810 | Msa0176290:intron | 45.0% |
! | TGGGACTGATTTCTCTACGA+GGG | + | chr1_4:62599792-62599811 | Msa0176290:intron | 45.0% |
TTTCTCTACGAGGGAGAATC+AGG | + | chr1_4:62599801-62599820 | Msa0176290:intron | 45.0% | |
! | CAGGCCGCAAACAAATTTTG+AGG | + | chr1_4:62599820-62599839 | Msa0176290:intron | 45.0% |
! | CTAGAATGCCCTCGTTGATT+TGG | - | chr1_4:62600008-62600027 | None:intergenic | 45.0% |
!! | TCAACGAGGGCATTCTAGAT+TGG | + | chr1_4:62600010-62600029 | Msa0176290:CDS | 45.0% |
GCTTCCAACCTCTACAAAAC+TGG | - | chr1_4:62600274-62600293 | None:intergenic | 45.0% | |
CTTTCACAACAAGCAGCACA+TGG | + | chr1_4:62600514-62600533 | Msa0176290:intron | 45.0% | |
ACATGGGTGCATGTGAAAGA+GGG | + | chr1_4:62600531-62600550 | Msa0176290:intron | 45.0% | |
GAAATGGATCCCACGTAAAG+TGG | + | chr1_4:62600709-62600728 | Msa0176290:intron | 45.0% | |
AATGGATCCCACGTAAAGTG+GGG | + | chr1_4:62600711-62600730 | Msa0176290:intron | 45.0% | |
ATAAGACCGGGAGTCAAAAG+TGG | + | chr1_4:62600844-62600863 | Msa0176290:intron | 45.0% | |
!!! | AAAAATATCAAATTTAATTT+TGG | - | chr1_4:62600485-62600504 | None:intergenic | 5.0% |
!! | TAAAAAAAAAAAAAAAAACA+AGG | - | chr1_4:62601484-62601503 | None:intergenic | 5.0% |
CGGTCCAAATTGACCTAGTC+TGG | + | chr1_4:62596569-62596588 | Msa0176290:intron | 50.0% | |
TCCCCCAGACTAGGTCAATT+TGG | - | chr1_4:62596576-62596595 | None:intergenic | 50.0% | |
AGTCTCTTGGTTACGGGAAG+AGG | - | chr1_4:62596700-62596719 | None:intergenic | 50.0% | |
GATAGAGGGGGCTGAAACAA+GGG | - | chr1_4:62596818-62596837 | None:intergenic | 50.0% | |
AGATAGAGGGGGCTGAAACA+AGG | - | chr1_4:62596819-62596838 | None:intergenic | 50.0% | |
!!! | CGGCCACCGATTTTCCAAAT+CGG | + | chr1_4:62596950-62596969 | Msa0176290:intron | 50.0% |
!! | TGGCCGATTTGGAAAATCGG+TGG | - | chr1_4:62596956-62596975 | None:intergenic | 50.0% |
!! | CGGTGGCCGATTTGGAAAAT+CGG | - | chr1_4:62596959-62596978 | None:intergenic | 50.0% |
GGAAAAATCGGTGGCCGATT+TGG | - | chr1_4:62596967-62596986 | None:intergenic | 50.0% | |
CGAACAGAAAGCCTCCCAAA+AGG | + | chr1_4:62596987-62597006 | Msa0176290:intron | 50.0% | |
!!! | GATTTTGGCTGCCTTTTGGG+AGG | - | chr1_4:62597001-62597020 | None:intergenic | 50.0% |
!!! | GCCGATTTTGGCTGCCTTTT+GGG | - | chr1_4:62597004-62597023 | None:intergenic | 50.0% |
!! | GGAAAATCGGTGGCCGATTT+TGG | - | chr1_4:62596946-62596965 | None:intergenic | 50.0% |
!!! | CGGCCACCGATTTTCCAAAT+CGG | + | chr1_4:62596950-62596969 | Msa0176290:intron | 50.0% |
!! | TGGCCGATTTGGAAAATCGG+TGG | - | chr1_4:62596956-62596975 | None:intergenic | 50.0% |
!! | CGGTGGCCGATTTGGAAAAT+CGG | - | chr1_4:62596959-62596978 | None:intergenic | 50.0% |
GTACAAATCGGTGGCCGATT+TGG | - | chr1_4:62597037-62597056 | None:intergenic | 50.0% | |
AAGCAAGGGAAAGAGCAGCA+AGG | - | chr1_4:62597166-62597185 | None:intergenic | 50.0% | |
! | CTTGGTGTAGTGGGAAGCAA+GGG | - | chr1_4:62597180-62597199 | None:intergenic | 50.0% |
!! | ACTTGGTGTAGTGGGAAGCA+AGG | - | chr1_4:62597181-62597200 | None:intergenic | 50.0% |
!! | GTGGAGCTACTTGGTGTAGT+GGG | - | chr1_4:62597189-62597208 | None:intergenic | 50.0% |
!! | TGTGGAGCTACTTGGTGTAG+TGG | - | chr1_4:62597190-62597209 | None:intergenic | 50.0% |
CACAAGGATCTTCAAAGGGG+CGG | - | chr1_4:62597251-62597270 | None:intergenic | 50.0% | |
TCCGATGGCTGAAGAGGTTA+AGG | - | chr1_4:62597317-62597336 | None:intergenic | 50.0% | |
AGACATTCCGATGGCTGAAG+AGG | - | chr1_4:62597323-62597342 | None:intergenic | 50.0% | |
GCAAGGACCTTTCGAGAAGA+CGG | - | chr1_4:62597536-62597555 | None:intergenic | 50.0% | |
CCTAGTGTAGTTGGACTGCA+AGG | - | chr1_4:62597553-62597572 | None:intergenic | 50.0% | |
CCTTGCAGTCCAACTACACT+AGG | + | chr1_4:62597550-62597569 | Msa0176290:intron | 50.0% | |
ACCTTGCATCCAATCACCCT+TGG | + | chr1_4:62597644-62597663 | Msa0176290:intron | 50.0% | |
TCCAAGGGTGATTGGATGCA+AGG | - | chr1_4:62597648-62597667 | None:intergenic | 50.0% | |
!! | CATGAAGACGGAAGGCATTC+CGG | - | chr1_4:62597715-62597734 | None:intergenic | 50.0% |
CTATGCTCTAGTGGTGAGCA+AGG | - | chr1_4:62597746-62597765 | None:intergenic | 50.0% | |
GTACGACTATGGAGGACCTT+GGG | - | chr1_4:62597771-62597790 | None:intergenic | 50.0% | |
TAGGTGGAGTTGAACACACC+GGG | - | chr1_4:62597798-62597817 | None:intergenic | 50.0% | |
!! | GTTGGAAGCTCAGCTTTAGG+TGG | - | chr1_4:62597814-62597833 | None:intergenic | 50.0% |
GAGGTTGGAAGCTCAGCTTT+AGG | - | chr1_4:62597817-62597836 | None:intergenic | 50.0% | |
! | TCATGATCTACCGGTTGAGG+TGG | - | chr1_4:62597884-62597903 | None:intergenic | 50.0% |
!! | GGTATTGATGCCTAGTGGAG+CGG | - | chr1_4:62597968-62597987 | None:intergenic | 50.0% |
GAAGGTGATGTTGGTCACCT+TGG | - | chr1_4:62597989-62598008 | None:intergenic | 50.0% | |
!! | GATGGTGTGGTGTTGTTTGG+AGG | - | chr1_4:62598014-62598033 | None:intergenic | 50.0% |
GAACATTGAGGTGCGTCTTG+GGG | - | chr1_4:62598050-62598069 | None:intergenic | 50.0% | |
GAGAACATTGAGGTGCGTCT+TGG | - | chr1_4:62598052-62598071 | None:intergenic | 50.0% | |
CTCCACAAGTAGCTCCATGA+CGG | + | chr1_4:62598096-62598115 | Msa0176290:intron | 50.0% | |
ATCTCCGAGGCACAAGACAA+TGG | + | chr1_4:62598261-62598280 | Msa0176290:intron | 50.0% | |
! | AGTGCCATTGTCTTGTGCCT+CGG | - | chr1_4:62598268-62598287 | None:intergenic | 50.0% |
GAAGGGTGAAGGTTCGTTAC+CGG | - | chr1_4:62598338-62598357 | None:intergenic | 50.0% | |
CAAGTACCATGGGTTCGAAG+TGG | - | chr1_4:62598453-62598472 | None:intergenic | 50.0% | |
CGGTCCAAATTGACCTAGTC+TGG | + | chr1_4:62596569-62596588 | Msa0176290:intron | 50.0% | |
TCCCCCAGACTAGGTCAATT+TGG | - | chr1_4:62596576-62596595 | None:intergenic | 50.0% | |
AGTCTCTTGGTTACGGGAAG+AGG | - | chr1_4:62596700-62596719 | None:intergenic | 50.0% | |
GATAGAGGGGGCTGAAACAA+GGG | - | chr1_4:62596818-62596837 | None:intergenic | 50.0% | |
AGATAGAGGGGGCTGAAACA+AGG | - | chr1_4:62596819-62596838 | None:intergenic | 50.0% | |
!!! | CGGCCACCGATTTTCCAAAT+CGG | + | chr1_4:62596950-62596969 | Msa0176290:intron | 50.0% |
!! | TGGCCGATTTGGAAAATCGG+TGG | - | chr1_4:62596956-62596975 | None:intergenic | 50.0% |
!! | CGGTGGCCGATTTGGAAAAT+CGG | - | chr1_4:62596959-62596978 | None:intergenic | 50.0% |
GGAAAAATCGGTGGCCGATT+TGG | - | chr1_4:62596967-62596986 | None:intergenic | 50.0% | |
CGAACAGAAAGCCTCCCAAA+AGG | + | chr1_4:62596987-62597006 | Msa0176290:intron | 50.0% | |
!!! | GATTTTGGCTGCCTTTTGGG+AGG | - | chr1_4:62597001-62597020 | None:intergenic | 50.0% |
!!! | GCCGATTTTGGCTGCCTTTT+GGG | - | chr1_4:62597004-62597023 | None:intergenic | 50.0% |
!! | GGAAAATCGGTGGCCGATTT+TGG | - | chr1_4:62596946-62596965 | None:intergenic | 50.0% |
!!! | CGGCCACCGATTTTCCAAAT+CGG | + | chr1_4:62596950-62596969 | Msa0176290:intron | 50.0% |
!! | TGGCCGATTTGGAAAATCGG+TGG | - | chr1_4:62596956-62596975 | None:intergenic | 50.0% |
!! | CGGTGGCCGATTTGGAAAAT+CGG | - | chr1_4:62596959-62596978 | None:intergenic | 50.0% |
GTACAAATCGGTGGCCGATT+TGG | - | chr1_4:62597037-62597056 | None:intergenic | 50.0% | |
!! | CAGGCCAGTTTTGTAGAGGT+TGG | + | chr1_4:62600267-62600286 | Msa0176290:CDS | 50.0% |
CACATGGGTGCATGTGAAAG+AGG | + | chr1_4:62600530-62600549 | Msa0176290:intron | 50.0% | |
CAACACACCGGCGTTAACTA+TGG | + | chr1_4:62601187-62601206 | Msa0176290:intron | 50.0% | |
TCCACGACCATAGTTAACGC+CGG | - | chr1_4:62601197-62601216 | None:intergenic | 50.0% | |
TGGTCGTGGAAGTGATGCTA+AGG | + | chr1_4:62601207-62601226 | Msa0176290:intron | 50.0% | |
GGTCGTGGAAGTGATGCTAA+GGG | + | chr1_4:62601208-62601227 | Msa0176290:intron | 50.0% | |
TTTGCACGATCGCTTAGGTG+TGG | + | chr1_4:62601802-62601821 | Msa0176290:CDS | 50.0% | |
ACGGGAAGAGGCTGGGATTT+GGG | - | chr1_4:62596688-62596707 | None:intergenic | 55.0% | |
TACGGGAAGAGGCTGGGATT+TGG | - | chr1_4:62596689-62596708 | None:intergenic | 55.0% | |
CTTGGTTACGGGAAGAGGCT+GGG | - | chr1_4:62596695-62596714 | None:intergenic | 55.0% | |
TCTTGGTTACGGGAAGAGGC+TGG | - | chr1_4:62596696-62596715 | None:intergenic | 55.0% | |
!!! | GGCCGATTTTGGCTGCCTTT+TGG | - | chr1_4:62597005-62597024 | None:intergenic | 55.0% |
AGGATCTTCAAAGGGGCGGA+AGG | - | chr1_4:62597247-62597266 | None:intergenic | 55.0% | |
GAAGGCGGAAGACATTCCGA+TGG | - | chr1_4:62597332-62597351 | None:intergenic | 55.0% | |
ACCTCAACCCTTTCAGCCCT+TGG | + | chr1_4:62597502-62597521 | Msa0176290:intron | 55.0% | |
TCCAAGGGCTGAAAGGGTTG+AGG | - | chr1_4:62597506-62597525 | None:intergenic | 55.0% | |
! | CCTTGGGTGCTATGCTCTAG+TGG | - | chr1_4:62597755-62597774 | None:intergenic | 55.0% |
CCACTAGAGCATAGCACCCA+AGG | + | chr1_4:62597752-62597771 | Msa0176290:intron | 55.0% | |
GGTACGACTATGGAGGACCT+TGG | - | chr1_4:62597772-62597791 | None:intergenic | 55.0% | |
CTCCATAGTCGTACCACTCC+CGG | + | chr1_4:62597777-62597796 | Msa0176290:intron | 55.0% | |
CCTTGAACCTCCACCTCAAC+CGG | + | chr1_4:62597871-62597890 | Msa0176290:intron | 55.0% | |
! | TGATCTACCGGTTGAGGTGG+AGG | - | chr1_4:62597881-62597900 | None:intergenic | 55.0% |
ATTCTTACCACCGCCTCTCC+AGG | + | chr1_4:62597906-62597925 | Msa0176290:intron | 55.0% | |
TCAACATCAGCCTGGAGAGG+CGG | - | chr1_4:62597919-62597938 | None:intergenic | 55.0% | |
CACTCAACATCAGCCTGGAG+AGG | - | chr1_4:62597922-62597941 | None:intergenic | 55.0% | |
ATTGATGCCTAGTGGAGCGG+TGG | - | chr1_4:62597965-62597984 | None:intergenic | 55.0% | |
CTTTGACCACATCGATGCCG+CGG | + | chr1_4:62598207-62598226 | Msa0176290:intron | 55.0% | |
!! | ATACAACCGCGGCATCGATG+TGG | - | chr1_4:62598216-62598235 | None:intergenic | 55.0% |
GCACAAGACAATGGCACTCC+TGG | + | chr1_4:62598270-62598289 | Msa0176290:intron | 55.0% | |
!! | GAAGACCGAGATGGTGGACA+AGG | - | chr1_4:62598296-62598315 | None:intergenic | 55.0% |
ATCCTTTGACCCTTGCCCCA+CGG | + | chr1_4:62598476-62598495 | Msa0176290:intron | 55.0% | |
ACGGGAAGAGGCTGGGATTT+GGG | - | chr1_4:62596688-62596707 | None:intergenic | 55.0% | |
TACGGGAAGAGGCTGGGATT+TGG | - | chr1_4:62596689-62596708 | None:intergenic | 55.0% | |
CTTGGTTACGGGAAGAGGCT+GGG | - | chr1_4:62596695-62596714 | None:intergenic | 55.0% | |
TCTTGGTTACGGGAAGAGGC+TGG | - | chr1_4:62596696-62596715 | None:intergenic | 55.0% | |
!!! | GGCCGATTTTGGCTGCCTTT+TGG | - | chr1_4:62597005-62597024 | None:intergenic | 55.0% |
! | CCTTGATGTAGAGGGGTGTG+TGG | - | chr1_4:62599540-62599559 | None:intergenic | 55.0% |
CCACACACCCCTCTACATCA+AGG | + | chr1_4:62599537-62599556 | Msa0176290:CDS | 55.0% | |
TGGGTCTCCCCACTTTACGT+GGG | - | chr1_4:62600721-62600740 | None:intergenic | 55.0% | |
ACCGGCGTTAACTATGGTCG+TGG | + | chr1_4:62601193-62601212 | Msa0176290:intron | 55.0% | |
CGCTAGCACCCGTATCCTCT+AGG | - | chr1_4:62596101-62596120 | None:intergenic | 60.0% | |
!! | GAAGACGGAAGGCATTCCGG+AGG | - | chr1_4:62597712-62597731 | None:intergenic | 60.0% |
CGGGAGTGGTACGACTATGG+AGG | - | chr1_4:62597779-62597798 | None:intergenic | 60.0% | |
CACCGGGAGTGGTACGACTA+TGG | - | chr1_4:62597782-62597801 | None:intergenic | 60.0% | |
GGAGTTGAACACACCGGGAG+TGG | - | chr1_4:62597793-62597812 | None:intergenic | 60.0% | |
CCGGTTGAGGTGGAGGTTCA+AGG | - | chr1_4:62597874-62597893 | None:intergenic | 60.0% | |
! | ATGCGGGTGCTCTGATGGTG+TGG | - | chr1_4:62598027-62598046 | None:intergenic | 60.0% |
TGAGGTGCGTCTTGGGGATG+CGG | - | chr1_4:62598044-62598063 | None:intergenic | 60.0% | |
GGCCGTCATGGAGCTACTTG+TGG | - | chr1_4:62598101-62598120 | None:intergenic | 60.0% | |
!! | CCTGGCCTTGTCCACCATCT+CGG | + | chr1_4:62598288-62598307 | Msa0176290:intron | 60.0% |
AGCGGAGAAGACCGAGATGG+TGG | - | chr1_4:62598302-62598321 | None:intergenic | 60.0% | |
ACGAGCGGAGAAGACCGAGA+TGG | - | chr1_4:62598305-62598324 | None:intergenic | 60.0% | |
GGTCTTCTCCGCTCGTGTCA+TGG | + | chr1_4:62598309-62598328 | Msa0176290:intron | 60.0% | |
TCCGCTCGTGTCATGGTGAC+CGG | + | chr1_4:62598316-62598335 | Msa0176290:intron | 60.0% | |
ACCGGTCACCATGACACGAG+CGG | - | chr1_4:62598320-62598339 | None:intergenic | 60.0% | |
TTTGACCCTTGCCCCACGGT+GGG | + | chr1_4:62598480-62598499 | Msa0176290:intron | 60.0% | |
AACAATTGGCGCCCACCGTG+GGG | - | chr1_4:62598494-62598513 | None:intergenic | 60.0% | |
CAACAATTGGCGCCCACCGT+GGG | - | chr1_4:62598495-62598514 | None:intergenic | 60.0% | |
GTGGGTCTCCCCACTTTACG+TGG | - | chr1_4:62600722-62600741 | None:intergenic | 60.0% | |
GCTGCTCTCTCCCCCAGACT+AGG | - | chr1_4:62596585-62596604 | None:intergenic | 65.0% | |
ACATCAGCCTGGAGAGGCGG+TGG | - | chr1_4:62597916-62597935 | None:intergenic | 65.0% | |
CTAGTGGAGCGGTGGTCGTC+TGG | - | chr1_4:62597957-62597976 | None:intergenic | 65.0% | |
CAGACGACCACCGCTCCACT+AGG | + | chr1_4:62597955-62597974 | Msa0176290:intron | 65.0% | |
TGGGGATGCGGGTGCTCTGA+TGG | - | chr1_4:62598032-62598051 | None:intergenic | 65.0% | |
GAGGTGCGTCTTGGGGATGC+GGG | - | chr1_4:62598043-62598062 | None:intergenic | 65.0% | |
!! | CCGAGATGGTGGACAAGGCC+AGG | - | chr1_4:62598291-62598310 | None:intergenic | 65.0% |
CACCGTGGGGCAAGGGTCAA+AGG | - | chr1_4:62598481-62598500 | None:intergenic | 65.0% | |
CTTTGACCCTTGCCCCACGG+TGG | + | chr1_4:62598479-62598498 | Msa0176290:intron | 65.0% | |
GCAACAATTGGCGCCCACCG+TGG | - | chr1_4:62598496-62598515 | None:intergenic | 65.0% | |
GCTGCTCTCTCCCCCAGACT+AGG | - | chr1_4:62596585-62596604 | None:intergenic | 65.0% | |
TGGCGCCCACCGTGGGGCAA+GGG | - | chr1_4:62598488-62598507 | None:intergenic | 75.0% | |
TTGGCGCCCACCGTGGGGCA+AGG | - | chr1_4:62598489-62598508 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 62594880 | 62602095 | 62594880 | ID=Msa0176290;Name=Msa0176290 |
chr1_4 | mRNA | 62594880 | 62602095 | 62594880 | ID=Msa0176290-mRNA-1;Parent=Msa0176290;Name=Msa0176290-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|8|0|621 |
chr1_4 | exon | 62594880 | 62594975 | 62594880 | ID=Msa0176290-mRNA-1:exon:20158;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62595526 | 62596003 | 62595526 | ID=Msa0176290-mRNA-1:exon:20159;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62596103 | 62596275 | 62596103 | ID=Msa0176290-mRNA-1:exon:20160;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62599303 | 62599558 | 62599303 | ID=Msa0176290-mRNA-1:exon:20161;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62599664 | 62599726 | 62599664 | ID=Msa0176290-mRNA-1:exon:20162;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62599886 | 62600031 | 62599886 | ID=Msa0176290-mRNA-1:exon:20163;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62600152 | 62600373 | 62600152 | ID=Msa0176290-mRNA-1:exon:20164;Parent=Msa0176290-mRNA-1 |
chr1_4 | exon | 62601664 | 62602095 | 62601664 | ID=Msa0176290-mRNA-1:exon:20165;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62594880 | 62594975 | 62594880 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62595526 | 62596003 | 62595526 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62596103 | 62596275 | 62596103 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62599303 | 62599558 | 62599303 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62599664 | 62599726 | 62599664 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62599886 | 62600031 | 62599886 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62600152 | 62600373 | 62600152 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
chr1_4 | CDS | 62601664 | 62602095 | 62601664 | ID=Msa0176290-mRNA-1:cds;Parent=Msa0176290-mRNA-1 |
Gene Sequence |
Protein sequence |