AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0179900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0179900 MtrunA17_Chr1g0205831 75.676 185 28 4 274 456 4 173 7.18e-80 249
Msa0179900 MtrunA17_Chr1g0205831 53.070 228 53 2 357 584 6 179 2.26e-62 203
Msa0179900 MtrunA17_Chr1g0205831 60.131 153 44 2 118 268 21 158 1.16e-50 172
Msa0179900 MtrunA17_Chr1g0205831 56.627 166 68 3 35 197 8 172 4.41e-49 168
Msa0179900 MtrunA17_Chr1g0205831 56.881 109 44 2 1 108 46 152 1.17e-27 109
Msa0179900 MtrunA17_Chr1g0205831 43.709 151 65 3 191 339 10 142 6.16e-27 107
Msa0179900 MtrunA17_Chr1g0205821 76.282 156 21 1 38 177 22 177 1.75e-72 229
Msa0179900 MtrunA17_Chr1g0205821 76.224 143 32 1 117 257 31 173 1.29e-65 212
Msa0179900 MtrunA17_Chr1g0205821 55.682 176 55 1 361 536 21 173 3.48e-54 182
Msa0179900 MtrunA17_Chr1g0205821 61.875 160 56 3 273 427 14 173 1.50e-49 169
Msa0179900 MtrunA17_Chr1g0205821 59.060 149 56 4 193 339 23 168 2.47e-46 160
Msa0179900 MtrunA17_Chr1g0205821 55.652 115 37 2 3 103 59 173 1.01e-29 115
Msa0179900 MtrunA17_Chr1g0205821 51.807 83 40 0 459 541 10 92 6.89e-19 84.7
Msa0179900 MtrunA17_Chr4g0075861 41.016 256 135 7 181 432 8 251 1.45e-44 162
Msa0179900 MtrunA17_Chr4g0075861 40.084 237 127 4 31 255 11 244 2.54e-41 153
Msa0179900 MtrunA17_Chr4g0075861 40.323 248 128 7 100 341 10 243 2.51e-38 145
Msa0179900 MtrunA17_Chr4g0075861 38.189 254 116 6 288 534 25 244 8.24e-34 132
Msa0179900 MtrunA17_Chr4g0075861 39.683 189 93 4 3 170 55 243 7.01e-29 118
Msa0179900 MtrunA17_Chr4g0075861 37.778 180 82 4 370 549 26 175 1.37e-18 87.8
Msa0179900 MtrunA17_Chr4g0075861 44.643 112 51 2 1 101 133 244 8.68e-17 82.4
Msa0179900 MtrunA17_Chr4g0075971 41.016 256 135 7 181 432 8 251 1.65e-41 158
Msa0179900 MtrunA17_Chr4g0075971 39.916 238 126 6 31 255 11 244 1.06e-37 147
Msa0179900 MtrunA17_Chr4g0075971 40.562 249 126 9 100 341 10 243 2.09e-35 140
Msa0179900 MtrunA17_Chr4g0075971 39.608 255 111 8 288 534 25 244 1.29e-32 132
Msa0179900 MtrunA17_Chr4g0075971 40.000 190 91 6 3 170 55 243 1.25e-26 114
Msa0179900 MtrunA17_Chr4g0075971 40.331 181 76 6 370 549 26 175 6.55e-19 90.5
Msa0179900 MtrunA17_Chr4g0075971 44.643 112 51 2 1 101 133 244 8.11e-17 84.0
Msa0179900 MtrunA17_Chr1g0205811 59.000 100 40 1 357 456 18 116 5.87e-29 111
Msa0179900 MtrunA17_Chr1g0205811 51.887 106 50 1 465 570 17 121 2.26e-26 103
Msa0179900 MtrunA17_Chr1g0205811 64.000 75 27 0 41 115 26 100 3.09e-25 100
Msa0179900 MtrunA17_Chr1g0205811 55.056 89 37 2 183 269 12 99 3.41e-22 92.4
Msa0179900 MtrunA17_Chr1g0205811 52.941 68 32 0 118 185 33 100 7.15e-18 80.1
Msa0179900 MtrunA17_Chr1g0205811 57.746 71 26 3 272 339 14 83 2.24e-16 75.9
Msa0179900 MtrunA17_Chr7g0218891 31.915 282 150 8 269 537 10 262 3.59e-27 111
Msa0179900 MtrunA17_Chr7g0218891 29.752 242 136 6 43 258 29 262 5.14e-27 110
Msa0179900 MtrunA17_Chr7g0218891 29.493 217 120 5 2 188 60 273 3.10e-20 90.9
Msa0179900 MtrunA17_Chr7g0218891 30.808 198 106 4 357 550 17 187 6.79e-16 78.2
Msa0179900 MtrunA17_Chr3g0077911 44.156 154 78 4 185 335 8 156 6.68e-27 107
Msa0179900 MtrunA17_Chr3g0077911 42.254 142 66 1 39 164 15 156 7.78e-26 103
Msa0179900 MtrunA17_Chr3g0077911 41.304 138 77 3 118 252 24 160 2.69e-23 96.7
Msa0179900 MtrunA17_Chr3g0077911 39.080 174 78 4 359 531 14 160 1.79e-22 94.4
Msa0179900 MtrunA17_Chr3g0077911 49.091 110 42 3 3 98 51 160 1.73e-19 85.9
Msa0179900 MtrunA17_Chr3g0077911 38.994 159 81 6 273 422 9 160 1.83e-17 80.1
Msa0179900 MtrunA17_Chr3g0077911 42.353 85 45 2 465 549 11 91 7.86e-13 66.6
Msa0179900 MtrunA17_Chr1g0205801 63.158 76 28 0 40 115 23 98 6.80e-25 99.8
Msa0179900 MtrunA17_Chr1g0205801 55.172 87 38 1 465 551 15 100 6.68e-22 91.3
Msa0179900 MtrunA17_Chr1g0205801 52.041 98 39 2 357 447 16 112 4.46e-21 88.6
Msa0179900 MtrunA17_Chr1g0205801 46.729 107 49 3 185 289 12 112 3.44e-20 86.3
Msa0179900 MtrunA17_Chr1g0205801 60.294 68 27 0 118 185 31 98 1.89e-18 81.3
Msa0179900 MtrunA17_Chr1g0205801 57.143 70 28 2 272 339 12 81 1.62e-16 75.9
Msa0179900 MtrunA17_Chr3g0077861 40.845 142 68 1 39 164 15 156 1.95e-24 100
Msa0179900 MtrunA17_Chr3g0077861 40.260 154 84 4 185 335 8 156 6.10e-22 93.2
Msa0179900 MtrunA17_Chr3g0077861 39.855 138 79 3 118 252 24 160 1.49e-21 92.0
Msa0179900 MtrunA17_Chr3g0077861 37.195 164 78 3 369 531 21 160 1.65e-19 86.3
Msa0179900 MtrunA17_Chr3g0077861 44.545 110 47 2 3 98 51 160 3.87e-17 79.3
Msa0179900 MtrunA17_Chr3g0077861 38.255 149 79 5 283 422 16 160 1.50e-15 74.7
Msa0179900 MtrunA17_Chr3g0077941 39.474 152 72 2 42 173 22 173 2.34e-24 100
Msa0179900 MtrunA17_Chr3g0077941 39.103 156 87 4 109 257 19 173 2.48e-21 91.7
Msa0179900 MtrunA17_Chr3g0077941 38.323 167 89 5 273 427 9 173 2.78e-20 88.6
Msa0179900 MtrunA17_Chr3g0077941 38.994 159 91 4 185 337 8 166 1.39e-19 86.7
Msa0179900 MtrunA17_Chr3g0077941 36.111 180 93 4 359 536 14 173 2.62e-17 80.1
Msa0179900 MtrunA17_Chr3g0077941 42.857 119 50 4 3 103 55 173 9.42e-12 63.9
Msa0179900 MtrunA17_Chr3g0077881 37.748 151 72 3 42 171 22 171 5.37e-24 99.4
Msa0179900 MtrunA17_Chr3g0077881 37.908 153 87 4 109 254 19 170 6.19e-21 90.5
Msa0179900 MtrunA17_Chr3g0077881 35.503 169 102 5 185 346 8 176 3.89e-19 85.5
Msa0179900 MtrunA17_Chr3g0077881 36.723 177 90 5 359 533 14 170 8.40e-19 84.3
Msa0179900 MtrunA17_Chr3g0077881 39.474 114 50 4 3 97 55 168 1.67e-12 66.2
Msa0179900 MtrunA17_Chr1g0206771 33.908 174 85 1 357 530 20 163 6.78e-24 99.0
Msa0179900 MtrunA17_Chr1g0206771 34.568 162 94 3 92 251 12 163 9.52e-24 98.6
Msa0179900 MtrunA17_Chr1g0206771 33.333 177 96 4 170 338 1 163 9.09e-22 93.2
Msa0179900 MtrunA17_Chr1g0206771 36.029 136 78 2 41 167 28 163 5.60e-20 87.8
Msa0179900 MtrunA17_Chr1g0206771 42.157 102 52 2 3 97 62 163 6.69e-14 70.5
Msa0179900 MtrunA17_Chr3g0077891 37.908 153 74 2 42 173 22 174 2.13e-23 97.4
Msa0179900 MtrunA17_Chr3g0077891 36.538 156 92 3 109 257 19 174 2.14e-22 94.7
Msa0179900 MtrunA17_Chr3g0077891 39.157 166 90 5 273 427 9 174 9.41e-22 92.8
Msa0179900 MtrunA17_Chr3g0077891 36.957 184 87 4 359 536 14 174 2.47e-21 91.7
Msa0179900 MtrunA17_Chr3g0077891 38.068 176 88 6 185 346 8 176 3.24e-19 85.5
Msa0179900 MtrunA17_Chr3g0077891 44.737 114 44 3 3 97 55 168 2.53e-15 74.3
Msa0179900 MtrunA17_Chr5g0415031 38.571 140 70 1 40 163 54 193 3.39e-20 95.5
Msa0179900 MtrunA17_Chr5g0415031 34.641 153 93 3 184 332 42 191 5.55e-19 91.7
Msa0179900 MtrunA17_Chr5g0415031 33.333 132 86 1 118 247 62 193 6.48e-18 88.2
Msa0179900 MtrunA17_Chr5g0415031 29.891 184 103 2 344 524 31 191 1.91e-15 80.1
Msa0179900 MtrunA17_Chr5g0415031 33.939 165 88 6 264 415 35 191 1.89e-14 77.0
Msa0179900 MtrunA17_Chr5g0415031 38.824 85 52 0 465 549 46 130 4.39e-11 66.2
Msa0179900 MtrunA17_Chr8g0364231 34.641 153 93 3 184 332 41 190 8.70e-18 87.8
Msa0179900 MtrunA17_Chr8g0364231 36.429 140 71 2 40 162 53 191 1.71e-17 86.7
Msa0179900 MtrunA17_Chr8g0364231 36.765 136 82 3 114 246 57 191 7.93e-17 84.7
Msa0179900 MtrunA17_Chr8g0364231 33.333 168 89 2 357 524 46 190 9.65e-14 74.7
Msa0179900 MtrunA17_Chr8g0364231 34.615 156 81 7 273 415 43 190 1.77e-12 70.9
Msa0179900 MtrunA17_Chr8g0364231 50.000 74 36 1 465 538 45 117 2.49e-12 70.1
Msa0179900 MtrunA17_Chr6g0452021 33.533 167 102 5 185 347 43 204 3.69e-17 84.3
Msa0179900 MtrunA17_Chr6g0452021 27.974 311 179 11 40 331 54 338 5.71e-16 80.9
Msa0179900 MtrunA17_Chr6g0452021 31.707 164 87 2 361 524 51 189 3.73e-13 72.0
Msa0179900 MtrunA17_Chr1g0209201 41.346 104 49 2 204 307 36 127 2.04e-16 76.6
Msa0179900 MtrunA17_Chr1g0209201 41.584 101 48 3 120 218 36 127 7.00e-14 69.3
Msa0179900 MtrunA17_Chr1g0209201 40.171 117 61 4 276 390 20 129 1.32e-12 65.5
Msa0179900 MtrunA17_Chr1g0209201 34.307 137 57 3 361 497 24 127 3.69e-11 61.2
Msa0179900 MtrunA17_Chr1g0206781 36.290 124 48 2 186 307 12 106 2.80e-16 75.5
Msa0179900 MtrunA17_Chr1g0206781 43.158 95 49 1 448 542 2 91 3.74e-16 75.1
Msa0179900 MtrunA17_Chr1g0206781 45.455 77 42 0 357 433 15 91 2.17e-14 70.1
Msa0179900 MtrunA17_Chr1g0206781 39.362 94 47 1 41 134 23 106 4.07e-14 69.3
Msa0179900 MtrunA17_Chr1g0206781 35.537 121 53 3 270 388 9 106 2.11e-12 64.3
Msa0179900 MtrunA17_Chr6g0452001 31.737 167 107 4 184 346 62 225 3.38e-16 82.8
Msa0179900 MtrunA17_Chr6g0452001 32.857 140 78 1 40 163 74 213 1.64e-13 73.9
Msa0179900 MtrunA17_Chr6g0452001 30.303 132 90 1 118 247 82 213 2.80e-12 70.1
Msa0179900 MtrunA17_Chr2g0328701 39.640 111 57 2 181 291 25 125 3.26e-15 72.4
Msa0179900 MtrunA17_Chr2g0328701 35.238 105 60 2 100 202 27 125 3.69e-11 60.8
Msa0179900 MtrunA17_Chr1g0205861 48.000 75 29 2 264 332 8 78 2.69e-12 63.9
Msa0179900 MtrunA17_Chr1g0205861 38.532 109 61 3 179 285 10 114 1.64e-11 61.6
Msa0179900 MtrunA17_Chr3g0077811 50.847 59 29 0 42 100 27 85 5.04e-12 63.2
Msa0179900 MtrunA17_Chr8g0364021 33.607 122 71 3 141 260 6 119 4.79e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0179900 AT1G27260.1 35.751 193 103 3 357 549 7 178 4.40e-23 98.6
Msa0179900 AT1G27260.1 36.458 192 110 5 116 300 20 206 2.28e-20 90.5
Msa0179900 AT1G27260.1 34.194 155 93 4 184 331 2 154 3.05e-19 87.4
Msa0179900 AT1G27260.1 34.615 182 102 5 271 440 2 178 3.23e-17 81.3
Msa0179900 AT1G27260.1 32.990 194 107 4 41 212 15 207 1.77e-15 76.3
Msa0179900 AT1G24230.1 31.081 222 123 7 116 330 32 230 5.15e-21 93.2
Msa0179900 AT1G24230.1 30.769 221 140 5 38 249 24 240 6.41e-21 92.8
Msa0179900 AT1G24230.1 33.333 159 91 6 272 427 14 160 2.63e-15 76.3
Msa0179900 AT1G23810.1 31.651 218 132 4 357 573 18 219 2.01e-19 88.2
Msa0179900 AT1G23810.1 32.121 165 100 4 116 270 32 194 9.21e-16 77.8
Msa0179900 AT1G23810.1 28.467 137 91 3 202 331 34 170 8.50e-13 68.9
Msa0179900 AT1G23810.1 27.692 195 114 7 264 440 9 194 2.52e-12 67.4
Msa0179900 AT1G23810.1 29.412 153 84 3 47 175 33 185 6.30e-11 63.5
Msa0179900 AT1G24250.1 31.818 220 140 6 357 573 18 230 1.33e-18 86.3
Msa0179900 AT1G24250.1 33.146 178 96 5 114 270 30 205 2.72e-16 79.3
Msa0179900 AT1G24250.1 30.682 176 92 7 181 331 11 181 5.81e-13 69.7
Msa0179900 AT1G59890.4 33.553 152 92 3 185 332 45 191 6.51e-16 82.0
Msa0179900 AT1G59890.4 31.515 165 92 3 40 187 56 216 3.05e-14 76.6
Msa0179900 AT1G59890.2 33.553 152 92 3 185 332 45 191 6.77e-16 82.0
Msa0179900 AT1G59890.2 31.515 165 92 3 40 187 56 216 3.20e-14 76.6
Msa0179900 AT1G59890.1 33.553 152 92 3 185 332 45 191 6.88e-16 82.0
Msa0179900 AT1G59890.1 31.515 165 92 3 40 187 56 216 3.22e-14 76.6
Msa0179900 AT1G59890.3 33.553 152 92 3 185 332 45 191 7.11e-16 82.0
Msa0179900 AT1G59890.3 31.515 165 92 3 40 187 56 216 3.11e-14 76.6
Msa0179900 AT1G70060.2 35.971 139 72 1 41 162 26 164 1.25e-15 81.3
Msa0179900 AT1G70060.2 32.680 153 97 3 184 332 13 163 5.21e-15 79.3
Msa0179900 AT1G70060.2 32.576 132 86 2 118 246 33 164 8.20e-13 72.4
Msa0179900 AT1G70060.2 34.211 152 88 6 273 415 15 163 6.35e-11 66.2
Msa0179900 AT1G70060.1 35.971 139 72 1 41 162 26 164 1.25e-15 81.3
Msa0179900 AT1G70060.1 32.680 153 97 3 184 332 13 163 5.21e-15 79.3
Msa0179900 AT1G70060.1 32.576 132 86 2 118 246 33 164 8.20e-13 72.4
Msa0179900 AT1G70060.1 34.211 152 88 6 273 415 15 163 6.35e-11 66.2
Msa0179900 AT3G01320.1 26.738 374 224 11 40 371 68 433 1.53e-15 80.9
Msa0179900 AT3G01320.1 34.375 160 87 8 273 423 58 208 2.64e-12 70.5
Msa0179900 AT1G10450.3 33.728 169 101 5 169 332 68 230 2.18e-15 80.5
Msa0179900 AT1G10450.3 32.184 174 89 4 40 184 95 268 2.94e-14 77.0
Msa0179900 AT1G10450.3 35.385 130 80 3 118 245 103 230 8.34e-14 75.5
Msa0179900 AT1G10450.3 33.333 150 89 3 273 415 85 230 5.65e-13 72.8
Msa0179900 AT1G10450.3 31.953 169 88 3 357 524 88 230 4.17e-11 66.6
Msa0179900 AT1G24190.1 31.847 157 92 4 184 332 13 162 2.28e-15 80.5
Msa0179900 AT1G24190.1 32.738 168 96 3 41 191 26 193 9.62e-15 78.6
Msa0179900 AT1G24190.1 30.216 139 94 2 118 253 33 171 9.75e-13 72.0
Msa0179900 AT1G24190.1 32.927 164 90 7 273 423 15 171 3.14e-12 70.5
Msa0179900 AT1G24190.3 31.847 157 92 4 184 332 13 162 2.34e-15 80.5
Msa0179900 AT1G24190.3 32.738 168 96 3 41 191 26 193 1.02e-14 78.2
Msa0179900 AT1G24190.3 30.216 139 94 2 118 253 33 171 9.68e-13 72.0
Msa0179900 AT1G24190.3 32.927 164 90 7 273 423 15 171 3.37e-12 70.1
Msa0179900 AT1G24190.2 31.847 157 92 4 184 332 13 162 2.42e-15 80.5
Msa0179900 AT1G24190.2 32.738 168 96 3 41 191 26 193 9.87e-15 78.6
Msa0179900 AT1G24190.2 30.216 139 94 2 118 253 33 171 1.01e-12 72.0
Msa0179900 AT1G24190.2 32.927 164 90 7 273 423 15 171 3.54e-12 70.1
Msa0179900 AT1G10450.2 33.728 169 101 5 169 332 17 179 2.57e-15 80.1
Msa0179900 AT1G10450.2 32.184 174 89 4 40 184 44 217 3.29e-14 76.6
Msa0179900 AT1G10450.2 35.385 130 80 3 118 245 52 179 8.88e-14 75.1
Msa0179900 AT1G10450.2 33.333 150 89 3 273 415 34 179 4.90e-13 72.8
Msa0179900 AT1G10450.2 31.953 169 88 3 357 524 37 179 4.05e-11 66.6
Msa0179900 AT1G10450.1 33.728 169 101 5 169 332 17 179 2.57e-15 80.1
Msa0179900 AT1G10450.1 32.184 174 89 4 40 184 44 217 3.29e-14 76.6
Msa0179900 AT1G10450.1 35.385 130 80 3 118 245 52 179 8.88e-14 75.1
Msa0179900 AT1G10450.1 33.333 150 89 3 273 415 34 179 4.90e-13 72.8
Msa0179900 AT1G10450.1 31.953 169 88 3 357 524 37 179 4.05e-11 66.6
Msa0179900 AT3G01320.2 26.171 363 228 9 40 371 68 421 4.38e-15 79.7
Msa0179900 AT3G01320.2 34.375 160 87 8 273 423 58 208 2.59e-12 70.5
Msa0179900 AT5G15020.1 34.043 141 73 2 40 163 63 200 9.96e-15 78.6
Msa0179900 AT5G15020.1 33.083 133 83 3 118 247 71 200 5.88e-14 75.9
Msa0179900 AT5G15020.1 31.515 165 100 5 184 340 51 210 8.82e-14 75.5
Msa0179900 AT5G15020.1 34.868 152 84 7 273 415 53 198 1.94e-12 70.9
Msa0179900 AT5G15020.2 34.043 141 73 2 40 163 63 200 1.02e-14 78.6
Msa0179900 AT5G15020.2 33.083 133 83 3 118 247 71 200 5.72e-14 75.9
Msa0179900 AT5G15020.2 31.515 165 100 5 184 340 51 210 8.72e-14 75.5
Msa0179900 AT5G15020.2 34.868 152 84 7 273 415 53 198 1.82e-12 71.2
Msa0179900 AT1G24200.1 30.968 155 93 4 184 332 13 159 1.32e-13 70.1
Msa0179900 AT1G24200.1 33.846 130 81 3 118 245 33 159 6.02e-13 68.6
Msa0179900 AT1G24200.1 32.624 141 74 2 38 161 23 159 1.34e-11 64.3
Msa0179900 AT1G24200.1 44.578 83 43 2 448 530 3 82 1.65e-11 64.3
Msa0179900 AT1G70030.1 31.034 145 93 3 190 332 18 157 3.05e-13 68.2
Msa0179900 AT1G70030.1 33.088 136 75 2 41 161 23 157 3.42e-13 68.2
Msa0179900 AT1G70030.1 32.090 134 89 2 113 245 25 157 8.69e-13 67.0
Msa0179900 AT1G27280.1 33.333 144 89 3 194 333 4 144 2.10e-12 67.4
Msa0179900 AT1G27280.1 29.688 192 115 5 118 298 12 194 6.77e-12 65.9
Msa0179900 AT1G27280.1 30.198 202 108 6 38 212 2 197 2.03e-11 64.7
Msa0179900 AT1G27270.1 29.655 145 91 3 200 333 32 176 1.77e-11 65.1
Msa0179900 AT5G15040.1 45.161 62 34 0 361 422 11 72 3.42e-11 60.1
Msa0179900 AT5G15040.3 45.161 62 34 0 361 422 11 72 3.42e-11 60.1
Msa0179900 AT5G15040.2 45.161 62 34 0 361 422 11 72 3.42e-11 60.1

Find 90 sgRNAs with CRISPR-Local

Find 611 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCTGTTGCAAACAAATT+TGG 0.102339 1_4:-67609945 None:intergenic
GTCCCAAAAGTAAATCTTTA+TGG 0.189829 1_4:-67610091 None:intergenic
TGAAACTCCTACATGATTTC+AGG 0.203193 1_4:+67609758 Msa0179900:CDS
TTCTATTCTATCAATTCTTT+TGG 0.256848 1_4:-67609782 None:intergenic
GGATTGATGGCGTTGTTTAA+AGG 0.276568 1_4:+67600253 None:intergenic
AACTCTTACATCAATTCTTT+TGG 0.276802 1_4:-67604706 None:intergenic
AACTCTAAAATCAATTCTTT+TGG 0.284021 1_4:-67610363 None:intergenic
AACTCTTACATCAATTCTTT+TGG 0.285232 1_4:-67604448 None:intergenic
AACTCTCATATCAATTCTTT+TGG 0.286653 1_4:-67610036 None:intergenic
CTGCTGTTGCAAACAAATTT+GGG 0.292450 1_4:-67609944 None:intergenic
GACTCTTCTATCAATTCTTT+TGG 0.310378 1_4:-67604190 None:intergenic
AGACCATAAAGATTTACTTT+TGG 0.338463 1_4:+67610088 Msa0179900:CDS
GATTGATGGCGTTGTTTAAA+GGG 0.359358 1_4:+67600254 None:intergenic
TGAAGCAATGACGTTTATAA+AGG 0.363280 1_4:+67609687 Msa0179900:intron
TTGAATCTCGCAATTAAATC+TGG 0.391607 1_4:-67600280 None:intergenic
GTGAAACTCCTACAAGATTT+CGG 0.391833 1_4:+67604165 Msa0179900:CDS
AGTTGCATTTCCAGATAAGA+TGG 0.401348 1_4:+67609971 Msa0179900:CDS
AACAAATTTGGGAATAGAAG+TGG 0.402435 1_4:-67609933 None:intergenic
GGTTACATTTAAAGATAAGA+TGG 0.406022 1_4:+67604641 Msa0179900:intron
GATGATGATAAAGAACAAAA+TGG 0.413023 1_4:+67600346 Msa0179900:CDS
GATTTCTCCTGGTGGCAAAA+AGG 0.421717 1_4:-67600305 None:intergenic
AGTTGCATTTCAAGATAAGA+TGG 0.422713 1_4:+67610298 Msa0179900:CDS
AATAGAAGAGTTGTCAAAGA+TGG 0.429386 1_4:+67609798 Msa0179900:CDS
AGTTATGAAAGAAGGAATGA+TGG 0.450472 1_4:+67604725 Msa0179900:CDS
ACTTGTGTTTCAAGATAAGA+AGG 0.472355 1_4:+67609717 Msa0179900:CDS
AGTTGTCAAAGATGGAGTTA+TGG 0.472541 1_4:+67609806 Msa0179900:CDS
AGTCGTCAAAGAAGGAGTTA+TGG 0.477577 1_4:+67604209 Msa0179900:CDS
AGTTGTCAAAGAAGGAATGA+TGG 0.479247 1_4:+67604467 Msa0179900:CDS
GGCAAGAAGATGTTGAATCT+TGG 0.485703 1_4:-67604261 None:intergenic
GGCAAGAAGGTGTTGAATCC+CGG 0.486543 1_4:-67604519 None:intergenic
CTTCTATTCTTCTTGCCACC+AGG 0.488485 1_4:+67609900 Msa0179900:CDS
AAGCTGTGTTTCATGATAAG+AGG 0.489654 1_4:+67604124 Msa0179900:CDS
AGGAGAAATCCCACTTCCAT+TGG 0.492224 1_4:+67600318 Msa0179900:CDS
GAAACTCCTACATGATTTCA+GGG 0.508203 1_4:+67609759 Msa0179900:CDS
ACACAAAATCTCACTTCCAT+TGG 0.512949 1_4:+67610463 Msa0179900:CDS
ACACAAAATCTCACTTCCAT+TGG 0.514630 1_4:+67610136 Msa0179900:CDS
GATAGAAGAGTCGTCAAAGA+AGG 0.515587 1_4:+67604201 Msa0179900:CDS
TTCAACATCTTCTTGCCACC+AGG 0.516818 1_4:+67604267 Msa0179900:CDS
TTCAACATCTTCTTGCCACC+AGG 0.516818 1_4:+67609864 Msa0179900:CDS
AATGGAAGTGGGATTTCTCC+TGG 0.520352 1_4:-67600316 None:intergenic
ACACAAAATCTCACTTCCAT+TGG 0.521284 1_4:+67604806 Msa0179900:CDS
TCATCATCATCCAATGGAAG+TGG 0.524405 1_4:-67600328 None:intergenic
GATGAACAACAAGGTGATGA+TGG 0.529706 1_4:+67610491 Msa0179900:CDS
TGTTGTAGATCATCATCAAA+TGG 0.537798 1_4:-67604306 None:intergenic
GATGTAAGAGTTGTCAAAGA+AGG 0.540360 1_4:+67604459 Msa0179900:CDS
GATGTAAGAGTTATGAAAGA+AGG 0.540360 1_4:+67604717 Msa0179900:CDS
AGATAAGATGGAAATGTTCG+AGG 0.540381 1_4:+67604653 Msa0179900:CDS
GATGAACAACAAGGTGGAGA+TGG 0.545992 1_4:+67610164 Msa0179900:CDS
TGAACTTCAAGTTGATGAAG+TGG 0.554268 1_4:+67610577 Msa0179900:CDS
TGTTGTTCATCACCATCCAA+TGG 0.554632 1_4:-67604822 None:intergenic
ACACAAAATCTCAATTCCAT+TGG 0.554696 1_4:+67604548 Msa0179900:CDS
CTCAACACTTGGTTGCCAGC+AGG 0.555626 1_4:+67610440 Msa0179900:CDS
GATGCTGAACAACAAGGTGA+TGG 0.558029 1_4:+67610539 Msa0179900:CDS
TTTGTGTCCCTCTGGCAAGA+AGG 0.563533 1_4:-67604532 None:intergenic
TTTGTGTCCCTCTGGCAAGA+AGG 0.563533 1_4:-67604790 None:intergenic
ACAAATTTGGGAATAGAAGT+GGG 0.571692 1_4:-67609932 None:intergenic
AGAAGTGGGATTTCATGTCC+TGG 0.573109 1_4:-67609882 None:intergenic
TGTTGTTCATCACCATCCAA+TGG 0.575143 1_4:-67610152 None:intergenic
TGTTGTTCATCACCATCCAA+TGG 0.575143 1_4:-67610479 None:intergenic
GATGATGAACAACAAGGTGA+TGG 0.578290 1_4:+67610212 Msa0179900:CDS
AGAAGTGGGAATTCATGTCC+TGG 0.583648 1_4:-67609918 None:intergenic
ACTCAACACTTGGTTGCCAG+TGG 0.586298 1_4:+67610112 Msa0179900:CDS
TTCAACACCTTCTTGCCAGA+GGG 0.592249 1_4:+67604525 Msa0179900:CDS
TTCAACACCTTCTTGCCAGA+GGG 0.592249 1_4:+67604783 Msa0179900:CDS
AAAATCTCACTTCCATTGGA+TGG 0.592611 1_4:+67604810 Msa0179900:CDS
AAAATCTCACTTCCATTGGA+TGG 0.592611 1_4:+67610140 Msa0179900:CDS
AAAATCTCACTTCCATTGGA+TGG 0.592611 1_4:+67610467 Msa0179900:CDS
TGTTGTAAATCATCAGCCAA+TGG 0.609984 1_4:-67604564 None:intergenic
CATCATCATCCAATGGAAGT+GGG 0.610295 1_4:-67600327 None:intergenic
ACCGCTCGAAGATGAAGCAA+TGG 0.613500 1_4:+67604341 Msa0179900:CDS
GAGTTGAAAGATGCACAGAA+AGG 0.613537 1_4:+67604861 Msa0179900:CDS
GGAAGTGAGATTTCATGTCC+TGG 0.614261 1_4:-67604285 None:intergenic
GGTGGCAAGAAGAATAGAAG+TGG 0.618772 1_4:-67609897 None:intergenic
TGAACAACAAGGTGATGGAT+CGG 0.624867 1_4:+67610217 Msa0179900:CDS
CAGAAAGATGCTGAACAACA+AGG 0.627330 1_4:+67610533 Msa0179900:CDS
ACCATTGCTTCATCTTCGAG+CGG 0.637751 1_4:-67604342 None:intergenic
CTCAACACTTGGTTGCCAGT+GGG 0.645795 1_4:+67610113 Msa0179900:CDS
ATTCAACACCTTCTTGCCAG+AGG 0.655191 1_4:+67604524 Msa0179900:CDS
ATTCAACACCTTCTTGCCAG+AGG 0.655191 1_4:+67604782 Msa0179900:CDS
GATGAACAACAAGATGAAGA+CGG 0.657602 1_4:+67604834 Msa0179900:CDS
GATGATAAAGAACAAAATGG+TGG 0.662752 1_4:+67600349 Msa0179900:CDS
GTGGCAAGAAGAATAGAAGT+GGG 0.680483 1_4:-67609896 None:intergenic
AGTGGGATTTCATGTCCTGG+TGG 0.708807 1_4:-67609879 None:intergenic
AGTGGGAATTCATGTCCTGG+TGG 0.708807 1_4:-67609915 None:intergenic
GGAAGTGGGATTTCTCCTGG+TGG 0.721953 1_4:-67600313 None:intergenic
CAGAATGATGATGAACAACA+AGG 0.749951 1_4:+67610206 Msa0179900:CDS
AGTGAGATTTCATGTCCTGG+TGG 0.759321 1_4:-67604282 None:intergenic
GATGGTGATGAACAACAAGG+TGG 0.767576 1_4:+67610158 Msa0179900:CDS
TTGGATGGTGATGAACAACA+AGG 0.791947 1_4:+67610155 Msa0179900:CDS
TTGGATGGTGATGAACAACA+AGG 0.791947 1_4:+67610482 Msa0179900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTTTATTTTTTTTT+TGG + chr1_4:67603225-67603244 Msa0179900:intron 0.0%
!!! TTTTTACTTTTAAATCAATA+TGG - chr1_4:67601141-67601160 None:intergenic 10.0%
!!! TTGTTTATTTATTTATTTTG+AGG + chr1_4:67601177-67601196 Msa0179900:intron 10.0%
!!! TGTTTATTTATTTATTTTGA+GGG + chr1_4:67601178-67601197 Msa0179900:intron 10.0%
!! TAATTATATATTTAGCAATT+TGG + chr1_4:67602689-67602708 Msa0179900:intron 10.0%
!! AATAATAAAGAAATAGATTT+AGG - chr1_4:67603092-67603111 None:intergenic 10.0%
!! TTTCTTTATTATTATAGTAT+AGG + chr1_4:67603099-67603118 Msa0179900:intron 10.0%
!!! ATTTTATCAATATGTTATAA+CGG + chr1_4:67603298-67603317 Msa0179900:intron 10.0%
!!! CAAATAATTTTATTTAGAAA+AGG - chr1_4:67608343-67608362 None:intergenic 10.0%
!!! CTTTTCTAAATAAAATTATT+TGG + chr1_4:67608341-67608360 Msa0179900:intron 10.0%
!! ATATTAAAACAAAACAAAAT+TGG - chr1_4:67609055-67609074 None:intergenic 10.0%
!!! ATATAAAATGACAAGTTTTT+TGG + chr1_4:67600461-67600480 Msa0179900:intron 15.0%
!!! TTTTTTTTTAAATAGCCTTT+AGG + chr1_4:67600899-67600918 Msa0179900:intron 15.0%
!!! GTTTTTTTTTTTTTGAAGAA+AGG + chr1_4:67600926-67600945 Msa0179900:intron 15.0%
!! AAAGTAAAAATAAAAGTGAA+AGG + chr1_4:67601151-67601170 Msa0179900:intron 15.0%
!! AAGTAAAAATAAAAGTGAAA+GGG + chr1_4:67601152-67601171 Msa0179900:intron 15.0%
!!! GATTTTATTTAAACACTAAA+GGG + chr1_4:67601213-67601232 Msa0179900:intron 15.0%
!!! ATTTTATTTAAACACTAAAG+GGG + chr1_4:67601214-67601233 Msa0179900:intron 15.0%
!!! CAATTATTTTTCTTTCTATT+TGG + chr1_4:67601420-67601439 Msa0179900:intron 15.0%
!! GTTAGAAATATATAGAAAAA+TGG - chr1_4:67602548-67602567 None:intergenic 15.0%
!! AAACATTAAAAATGTATAGA+GGG - chr1_4:67604005-67604024 None:intergenic 15.0%
!! CAAAATTTATTATGAAGATA+TGG + chr1_4:67605662-67605681 Msa0179900:intron 15.0%
!! AATGATTAAAAGAAAAAGAA+TGG + chr1_4:67606090-67606109 Msa0179900:intron 15.0%
!! TATAGTTAATAAGGATAATT+TGG - chr1_4:67606124-67606143 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+AGG + chr1_4:67606123-67606142 Msa0179900:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr1_4:67606250-67606269 Msa0179900:intron 15.0%
!! ATAAAACTTACCAAAAAAAA+AGG + chr1_4:67606481-67606500 Msa0179900:intron 15.0%
!!! AGTGTTTATATAATTCATTT+TGG - chr1_4:67606635-67606654 None:intergenic 15.0%
!!! TAAGGTTTTTAAAAAATGTA+TGG + chr1_4:67607745-67607764 Msa0179900:intron 15.0%
!! TTTATATGGATAAAAAACAT+AGG - chr1_4:67608092-67608111 None:intergenic 15.0%
!!! ATACCATTGATTAAAAAAAA+TGG + chr1_4:67608295-67608314 Msa0179900:intron 15.0%
!! TATCATGCATTTAATTAATT+TGG - chr1_4:67608405-67608424 None:intergenic 15.0%
!!! TACTTCTTTTTATTTTCTTA+CGG + chr1_4:67608423-67608442 Msa0179900:intron 15.0%
!!! TTTAATTTGTTTTTAAAACC+CGG - chr1_4:67608817-67608836 None:intergenic 15.0%
!! GTTTCAAAATTTAAAAAAAC+AGG + chr1_4:67609095-67609114 Msa0179900:intron 15.0%
!! GTAAAATATAATATAAGTGT+TGG - chr1_4:67609171-67609190 None:intergenic 15.0%
!!! CAATTATTTTTCTTTCTATT+TGG + chr1_4:67601420-67601439 Msa0179900:intron 15.0%
!!! GGATTTTATTTAAACACTAA+AGG + chr1_4:67601212-67601231 Msa0179900:intron 20.0%
!!! TTTTATTTAAACACTAAAGG+GGG + chr1_4:67601215-67601234 Msa0179900:intron 20.0%
!!! TAAAATTCAAAAGGTATAGA+AGG - chr1_4:67601627-67601646 None:intergenic 20.0%
!!! TTCTATACCTTTTGAATTTT+AGG + chr1_4:67601626-67601645 Msa0179900:intron 20.0%
!!! TTCTAGTTCTTATAGTAAAA+TGG - chr1_4:67602150-67602169 None:intergenic 20.0%
!!! AATCTAAAACAAAAGTGAAA+GGG - chr1_4:67603204-67603223 None:intergenic 20.0%
!!! TAATCTAAAACAAAAGTGAA+AGG - chr1_4:67603205-67603224 None:intergenic 20.0%
!! CAAACATTAAAAATGTATAG+AGG - chr1_4:67604006-67604025 None:intergenic 20.0%
!!! CTCTATACATTTTTAATGTT+TGG + chr1_4:67604004-67604023 Msa0179900:intron 20.0%
!!! TACATTTTTAATGTTTGGTT+CGG + chr1_4:67604009-67604028 Msa0179900:intron 20.0%
!!! AGACCATAAAAATTTACTTT+TGG + chr1_4:67604758-67604777 Msa0179900:CDS 20.0%
!!! GACCATAAAAATTTACTTTT+GGG + chr1_4:67604759-67604778 Msa0179900:CDS 20.0%
!!! ATCCCAAAAGTAAATTTTTA+TGG - chr1_4:67604764-67604783 None:intergenic 20.0%
!! TCTACAAAGTATATATACAA+TGG - chr1_4:67605071-67605090 None:intergenic 20.0%
!!! CATCTTTTTTGTATTATGTA+AGG - chr1_4:67605137-67605156 None:intergenic 20.0%
!! CTTACATAATACAAAAAAGA+TGG + chr1_4:67605135-67605154 Msa0179900:intron 20.0%
!!! ACATTAATTAATGGATTGAT+TGG + chr1_4:67605326-67605345 Msa0179900:intron 20.0%
!!! AATTATTCTAACTTCAAGTT+AGG + chr1_4:67605739-67605758 Msa0179900:intron 20.0%
!! CTTAGATGAAAGAAATAATA+AGG + chr1_4:67605855-67605874 Msa0179900:intron 20.0%
!! AATAAGGTATGACATAAAAA+AGG + chr1_4:67605871-67605890 Msa0179900:intron 20.0%
!! ATAAGGTATGACATAAAAAA+GGG + chr1_4:67605872-67605891 Msa0179900:intron 20.0%
!! AAACTAACCTATAGTTAATA+AGG - chr1_4:67606133-67606152 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_4:67606210-67606229 Msa0179900:intron 20.0%
!!! TTGGTAAGTTTTATTGTTTT+TGG - chr1_4:67606475-67606494 None:intergenic 20.0%
!!! TTTTAAACTTGATTTTTGCT+TGG - chr1_4:67606520-67606539 None:intergenic 20.0%
!!! TGTAAGACTAATTTTGTTTT+CGG - chr1_4:67606786-67606805 None:intergenic 20.0%
!!! TGACCATTTTTTTTAATCAA+TGG - chr1_4:67608301-67608320 None:intergenic 20.0%
!! AAAAACTAAACAAATGTAAG+AGG + chr1_4:67608480-67608499 Msa0179900:intron 20.0%
!! TAAAACAAAACAAAATTGGA+GGG - chr1_4:67609051-67609070 None:intergenic 20.0%
!! TTAAAACAAAACAAAATTGG+AGG - chr1_4:67609052-67609071 None:intergenic 20.0%
!!! TTTCTATACCTTTTGAATTT+TGG + chr1_4:67609595-67609614 Msa0179900:intron 20.0%
!!! TTCTATACCTTTTGAATTTT+GGG + chr1_4:67601626-67601645 Msa0179900:intron 20.0%
!!! TTCTATTCTATCAATTCTTT+TGG - chr1_4:67609785-67609804 None:intergenic 20.0%
!!! AACTCTAAAATCAATTCTTT+TGG - chr1_4:67610366-67610385 None:intergenic 20.0%
!!! AGACCATAAAAATTTACTTT+TGG + chr1_4:67604758-67604777 Msa0179900:CDS 20.0%
!!! GACCATAAAAATTTACTTTT+GGG + chr1_4:67604759-67604778 Msa0179900:CDS 20.0%
! GATGATGATAAAGAACAAAA+TGG + chr1_4:67600346-67600365 Msa0179900:CDS 25.0%
! TTTGATCATGCAAATATGAT+CGG + chr1_4:67600763-67600782 Msa0179900:intron 25.0%
!! AAACAAACAAATTTTTCGCA+AGG - chr1_4:67600881-67600900 None:intergenic 25.0%
! AAAAAAAAAACTGAGCCTAA+AGG - chr1_4:67600917-67600936 None:intergenic 25.0%
! TGACATGTATTTAAGAATAG+AGG + chr1_4:67601085-67601104 Msa0179900:intron 25.0%
! GACATGTATTTAAGAATAGA+GGG + chr1_4:67601086-67601105 Msa0179900:intron 25.0%
!!! ATTTTGAGGGAAAAAATGAA+AGG + chr1_4:67601191-67601210 Msa0179900:intron 25.0%
!! TACGTATTTGGTTTCTTATT+TGG + chr1_4:67601328-67601347 Msa0179900:intron 25.0%
! ATGAATGTTTATGAGGTAAA+AGG - chr1_4:67601594-67601613 None:intergenic 25.0%
! AGATCATATGAATGTTTATG+AGG - chr1_4:67601601-67601620 None:intergenic 25.0%
!! TTCTTTCCTTCATTGAATTT+TGG + chr1_4:67601668-67601687 Msa0179900:intron 25.0%
!! TCTTTCCTTCATTGAATTTT+GGG + chr1_4:67601669-67601688 Msa0179900:intron 25.0%
! GTATTATTCTACTGAAGAAT+TGG - chr1_4:67601909-67601928 None:intergenic 25.0%
! GGGAACTTAAAAATTGTATT+GGG + chr1_4:67602367-67602386 Msa0179900:intron 25.0%
! GGAACTTAAAAATTGTATTG+GGG + chr1_4:67602368-67602387 Msa0179900:intron 25.0%
! GAACTTAAAAATTGTATTGG+GGG + chr1_4:67602369-67602388 Msa0179900:intron 25.0%
! TAAGATCTATGATGATTCTA+AGG - chr1_4:67602617-67602636 None:intergenic 25.0%
! CAGTAGTTCAATAGTAAATA+CGG - chr1_4:67602727-67602746 None:intergenic 25.0%
! ATGAATTTAAGTCTACCAAT+GGG - chr1_4:67602935-67602954 None:intergenic 25.0%
! ATATCAACATATTGAGTTTG+CGG - chr1_4:67603021-67603040 None:intergenic 25.0%
!! ATAGATTTAGGACATGAATA+TGG - chr1_4:67603080-67603099 None:intergenic 25.0%
! AGTTTACCTATTTACTTGTT+TGG + chr1_4:67603379-67603398 Msa0179900:intron 25.0%
!! TTCATATGTCTTGTTGAATA+TGG + chr1_4:67603498-67603517 Msa0179900:intron 25.0%
!! TATATATAAAGCCTTTTAGC+TGG + chr1_4:67603690-67603709 Msa0179900:intron 25.0%
! TAACTGAATTTAATTGAGCA+AGG + chr1_4:67603973-67603992 Msa0179900:intron 25.0%
! GGTTACATTTGAAGATAATA+TGG + chr1_4:67604383-67604402 Msa0179900:intron 25.0%
!! AACTCTTACATCAATTCTTT+TGG - chr1_4:67604451-67604470 None:intergenic 25.0%
! AGACCATAAAAATTTACTTC+CGG + chr1_4:67604500-67604519 Msa0179900:CDS 25.0%
! GGTTACATTTAAAGATAAGA+TGG + chr1_4:67604641-67604660 Msa0179900:intron 25.0%
!! AACTCTTACATCAATTCTTT+TGG - chr1_4:67604451-67604470 None:intergenic 25.0%
!!! GTCATTTTATAGATCAAACT+AGG - chr1_4:67604932-67604951 None:intergenic 25.0%
! AGTTTGATCTATAAAATGAC+AGG + chr1_4:67604932-67604951 Msa0179900:intron 25.0%
! AGCAGAATCACATTAATTAA+TGG + chr1_4:67605317-67605336 Msa0179900:intron 25.0%
! CAGCGATTAAATAGTAAATA+TGG - chr1_4:67605562-67605581 None:intergenic 25.0%
! TACTATTTAATCGCTGAAAA+AGG + chr1_4:67605566-67605585 Msa0179900:intron 25.0%
! TAAGGTATGACATAAAAAAG+GGG + chr1_4:67605873-67605892 Msa0179900:intron 25.0%
!!! AAACGACACTCATTTTAAAA+CGG - chr1_4:67606041-67606060 None:intergenic 25.0%
!!! TTTAAAATGAGTGTCGTTTT+AGG + chr1_4:67606042-67606061 Msa0179900:intron 25.0%
! TAGTTTCAAAAGCAATACTT+TGG + chr1_4:67606147-67606166 Msa0179900:intron 25.0%
!!! TAGCAAACTTCCTTTTTTTT+TGG - chr1_4:67606494-67606513 None:intergenic 25.0%
! AGAAATAAGTTAATGTTGTG+AGG - chr1_4:67606566-67606585 None:intergenic 25.0%
!!! GTAAGACTAATTTTGTTTTC+GGG - chr1_4:67606785-67606804 None:intergenic 25.0%
! TTGTAGGTTGTTCAAAAATA+AGG - chr1_4:67606871-67606890 None:intergenic 25.0%
! AAGCCAAATCATATGTAAAA+AGG + chr1_4:67606923-67606942 Msa0179900:intron 25.0%
!! GATCCTTTTTACATATGATT+TGG - chr1_4:67606929-67606948 None:intergenic 25.0%
! CAGTTTATTAATTACACATG+AGG - chr1_4:67606966-67606985 None:intergenic 25.0%
!!! TTAGGAATATGTTTTTGTTG+GGG - chr1_4:67607465-67607484 None:intergenic 25.0%
!!! GTTAGGAATATGTTTTTGTT+GGG - chr1_4:67607466-67607485 None:intergenic 25.0%
! TAGATAAATCAAGACGATAT+CGG - chr1_4:67607488-67607507 None:intergenic 25.0%
! CTATTATGCATATTACCAAT+TGG + chr1_4:67607600-67607619 Msa0179900:intron 25.0%
!!! GGTTTTTAAAAAATGTATGG+AGG + chr1_4:67607748-67607767 Msa0179900:intron 25.0%
!! CAACATTTGATAATATTTGC+AGG + chr1_4:67607927-67607946 Msa0179900:intron 25.0%
! TGTGTGACTTGAATAAAAAA+AGG + chr1_4:67607995-67608014 Msa0179900:intron 25.0%
! TGACTTGAATAAAAAAAGGT+AGG + chr1_4:67607999-67608018 Msa0179900:intron 25.0%
! ATGGATAAAAAACATAGGAA+TGG - chr1_4:67608087-67608106 None:intergenic 25.0%
! ATATAAATAGATCCCACTTT+GGG + chr1_4:67608105-67608124 Msa0179900:intron 25.0%
! AAAATATGTAAGAGAGAGTA+TGG + chr1_4:67608161-67608180 Msa0179900:intron 25.0%
!! AAATATGTAAGAGAGAGTAT+GGG + chr1_4:67608162-67608181 Msa0179900:intron 25.0%
! AGTAGATTTGATGTATTGTT+TGG + chr1_4:67608209-67608228 Msa0179900:intron 25.0%
! ATTTATGAGAGAGAGAAATA+GGG - chr1_4:67608689-67608708 None:intergenic 25.0%
!! AGCACTACATTTTGTTAATT+AGG + chr1_4:67608916-67608935 Msa0179900:intron 25.0%
! AAAACAAAACAAAATTGGAG+GGG - chr1_4:67609050-67609069 None:intergenic 25.0%
!!! GAATACTAGTTTTTGAAAAG+TGG + chr1_4:67609126-67609145 Msa0179900:intron 25.0%
! GTGGAAAATAATGAACATTA+AGG + chr1_4:67609145-67609164 Msa0179900:intron 25.0%
!!! ACGTGTGTGTTTTTATTTTT+TGG - chr1_4:67609286-67609305 None:intergenic 25.0%
! ATTGCACTACAATATTTGAA+GGG - chr1_4:67609359-67609378 None:intergenic 25.0%
! AATTGCACTACAATATTTGA+AGG - chr1_4:67609360-67609379 None:intergenic 25.0%
!! TTTTTCTTTCTATTTGGCAT+TGG + chr1_4:67601426-67601445 Msa0179900:intron 25.0%
!! AACTCTCATATCAATTCTTT+TGG - chr1_4:67610039-67610058 None:intergenic 25.0%
!! AGACCATAAAGATTTACTTT+TGG + chr1_4:67610088-67610107 Msa0179900:CDS 25.0%
!!! GACCATAAAGATTTACTTTT+GGG + chr1_4:67610089-67610108 Msa0179900:CDS 25.0%
!!! GATTTTAGAGTTTTCAAAGA+AGG + chr1_4:67610374-67610393 Msa0179900:CDS 25.0%
!! GTCCCAAAAGTAAATTTTTA+TGG - chr1_4:67610421-67610440 None:intergenic 25.0%
TTGAATCTCGCAATTAAATC+TGG - chr1_4:67600283-67600302 None:intergenic 30.0%
TTATCATCATCATCATCCAA+TGG - chr1_4:67600337-67600356 None:intergenic 30.0%
GATGATAAAGAACAAAATGG+TGG + chr1_4:67600349-67600368 Msa0179900:CDS 30.0%
TGTATGAAATGAACTTCATG+AGG + chr1_4:67600509-67600528 Msa0179900:intron 30.0%
CATACAATAGACACATAAGA+CGG - chr1_4:67600576-67600595 None:intergenic 30.0%
!!! AATATGATCGGTTTGAGTTT+TGG + chr1_4:67600775-67600794 Msa0179900:intron 30.0%
TATTTAAGAATAGAGGGAGT+AGG + chr1_4:67601092-67601111 Msa0179900:intron 30.0%
AATCAATATGGATCATGTTG+AGG - chr1_4:67601129-67601148 None:intergenic 30.0%
TTAGAAATTTGCATGCTTTG+TGG + chr1_4:67601243-67601262 Msa0179900:intron 30.0%
TAGAAATTTGCATGCTTTGT+GGG + chr1_4:67601244-67601263 Msa0179900:intron 30.0%
GAAACCAAATACGTAAATTG+AGG - chr1_4:67601323-67601342 None:intergenic 30.0%
AGCAGAACCTAAAATTCAAA+AGG - chr1_4:67601636-67601655 None:intergenic 30.0%
AATCCAAGAAAAGAGCAAAA+AGG - chr1_4:67601875-67601894 None:intergenic 30.0%
! TTCGATTAGTTGTCAAAAAG+TGG + chr1_4:67602185-67602204 Msa0179900:intron 30.0%
!! ATTGACTTGTCTTGATACTT+AGG + chr1_4:67602213-67602232 Msa0179900:intron 30.0%
!! TTGATACTTAGGCTTTGTTT+GGG + chr1_4:67602224-67602243 Msa0179900:intron 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr1_4:67602287-67602306 Msa0179900:intron 30.0%
AATAAAAAATCCCCCTCATT+TGG + chr1_4:67602344-67602363 Msa0179900:intron 30.0%
ATAAAAAATCCCCCTCATTT+GGG + chr1_4:67602345-67602364 Msa0179900:intron 30.0%
GGGGAACTTAAAAATTGTAT+TGG + chr1_4:67602366-67602385 Msa0179900:intron 30.0%
TTAAAAATTGTATTGGGGGA+GGG + chr1_4:67602373-67602392 Msa0179900:intron 30.0%
!! ATGATTCTAAGGCTTTGTTT+GGG - chr1_4:67602606-67602625 None:intergenic 30.0%
CACACTTTCTTATAGATTCA+TGG - chr1_4:67602643-67602662 None:intergenic 30.0%
GAAACACAAGATGTATATGA+AGG + chr1_4:67602753-67602772 Msa0179900:intron 30.0%
GATGAATTTAAGTCTACCAA+TGG - chr1_4:67602936-67602955 None:intergenic 30.0%
TTTGGACTTGATTCAAATTG+TGG + chr1_4:67603243-67603262 Msa0179900:intron 30.0%
!! TATGCTGTTGTAACTGATTT+TGG + chr1_4:67603650-67603669 Msa0179900:intron 30.0%
!!! TTGTAACTGATTTTGGTTTG+TGG + chr1_4:67603657-67603676 Msa0179900:intron 30.0%
!!! TGATTTTGGTTTGTGGATAA+AGG + chr1_4:67603664-67603683 Msa0179900:intron 30.0%
TTGTCATTATTCCAGCTAAA+AGG - chr1_4:67603704-67603723 None:intergenic 30.0%
! GACTCTTCTATCAATTCTTT+TGG - chr1_4:67604193-67604212 None:intergenic 30.0%
TGTTGTAGATCATCATCAAA+TGG - chr1_4:67604309-67604328 None:intergenic 30.0%
! TTACATCAATTCTTTTGGCA+CGG - chr1_4:67604446-67604465 None:intergenic 30.0%
GACCATAAAAATTTACTTCC+GGG + chr1_4:67604501-67604520 Msa0179900:CDS 30.0%
! ATCCCGGAAGTAAATTTTTA+TGG - chr1_4:67604506-67604525 None:intergenic 30.0%
ACACAAAATCTCAATTCCAT+TGG + chr1_4:67604548-67604567 Msa0179900:CDS 30.0%
! TTACATCAATTCTTTTGGCA+TGG - chr1_4:67604446-67604465 None:intergenic 30.0%
GATGTAAGAGTTATGAAAGA+AGG + chr1_4:67604717-67604736 Msa0179900:CDS 30.0%
AGTTATGAAAGAAGGAATGA+TGG + chr1_4:67604725-67604744 Msa0179900:CDS 30.0%
CTATAAAATGACAGGTTCAT+TGG + chr1_4:67604940-67604959 Msa0179900:intron 30.0%
CAATCTAAGAAAAGAGCAAA+AGG - chr1_4:67604967-67604986 None:intergenic 30.0%
TTGATACAATTCTATGTACC+AGG - chr1_4:67605175-67605194 None:intergenic 30.0%
!! TGTGCAAAGTTTTCACTTTT+CGG + chr1_4:67605400-67605419 Msa0179900:intron 30.0%
!! CCAAATGATTCTAAGATAAC+CGG + chr1_4:67605464-67605483 Msa0179900:intron 30.0%
ATACGTAACATTTAGCAGTA+TGG + chr1_4:67605518-67605537 Msa0179900:intron 30.0%
TGCAAAATCAATTCTACTAG+AGG - chr1_4:67605713-67605732 None:intergenic 30.0%
TCTTTCATCTAAGTGTTATG+CGG - chr1_4:67605848-67605867 None:intergenic 30.0%
!! TGTTTGTTAAAGAGCATTTG+TGG + chr1_4:67605921-67605940 Msa0179900:intron 30.0%
!!! ATAGTGCATGATAATGGTTT+TGG - chr1_4:67605965-67605984 None:intergenic 30.0%
GTAGTGTGCAGAATATTAAT+TGG + chr1_4:67606172-67606191 Msa0179900:intron 30.0%
TGTGCAGAATATTAATTGGA+GGG + chr1_4:67606176-67606195 Msa0179900:intron 30.0%
GGAGTATGAAACTATATCTA+GGG + chr1_4:67606301-67606320 Msa0179900:intron 30.0%
TCTTTATGAATGCGATTGAA+GGG - chr1_4:67606445-67606464 None:intergenic 30.0%
TTCTTTATGAATGCGATTGA+AGG - chr1_4:67606446-67606465 None:intergenic 30.0%
! TGTATTTTCCGTGTTTTCTT+TGG - chr1_4:67606688-67606707 None:intergenic 30.0%
CAATGCTCAAACATTGAAAA+GGG + chr1_4:67606739-67606758 Msa0179900:intron 30.0%
AAATTAAGTCACATTCGTTG+TGG - chr1_4:67606821-67606840 None:intergenic 30.0%
GGAATGTTCTATTATTCAGT+TGG - chr1_4:67606850-67606869 None:intergenic 30.0%
CAAAGATTGACACTTTCAAA+GGG + chr1_4:67607196-67607215 Msa0179900:intron 30.0%
ATCATAATTTGGACCTCATT+TGG - chr1_4:67607233-67607252 None:intergenic 30.0%
TCCAAATTATGATGTAACTG+AGG + chr1_4:67607240-67607259 Msa0179900:intron 30.0%
ACCTCAGTTACATCATAATT+TGG - chr1_4:67607244-67607263 None:intergenic 30.0%
!! ACTTTCTAATGTTACTTTGC+AGG - chr1_4:67607359-67607378 None:intergenic 30.0%
!! GGTTAGGAATATGTTTTTGT+TGG - chr1_4:67607467-67607486 None:intergenic 30.0%
TGGAGTGTACAAAAACAAAA+AGG - chr1_4:67607529-67607548 None:intergenic 30.0%
TCTCATACATTTGGTCATTA+TGG - chr1_4:67607549-67607568 None:intergenic 30.0%
CAGAATGTATCTCATACATT+TGG - chr1_4:67607558-67607577 None:intergenic 30.0%
CATTCTGTTCACAAAGATAA+AGG + chr1_4:67607571-67607590 Msa0179900:intron 30.0%
TTACGACATATATAGCCAAT+TGG - chr1_4:67607618-67607637 None:intergenic 30.0%
CCAATTAAGTTAAGTTCACA+AGG - chr1_4:67607904-67607923 None:intergenic 30.0%
CCTTGTGAACTTAACTTAAT+TGG + chr1_4:67607901-67607920 Msa0179900:intron 30.0%
! TTGATAATATTTGCAGGAGT+CGG + chr1_4:67607933-67607952 Msa0179900:intron 30.0%
CAAAGTGGGATCTATTTATA+TGG - chr1_4:67608106-67608125 None:intergenic 30.0%
CATATAAATAGATCCCACTT+TGG + chr1_4:67608104-67608123 Msa0179900:intron 30.0%
TTTATGAGAGAGAGAAATAG+GGG - chr1_4:67608688-67608707 None:intergenic 30.0%
GATTTATGAGAGAGAGAAAT+AGG - chr1_4:67608690-67608709 None:intergenic 30.0%
! ATGAATGTTGATGAGGTAAA+AGG - chr1_4:67609564-67609583 None:intergenic 30.0%
AGATCATATGAATGTTGATG+AGG - chr1_4:67609571-67609590 None:intergenic 30.0%
AATCAAGGGATTAATTCTAC+TGG - chr1_4:67609665-67609684 None:intergenic 30.0%
AGTAGAATTAATCCCTTGAT+TGG + chr1_4:67609664-67609683 Msa0179900:intron 30.0%
TGAAGCAATGACGTTTATAA+AGG + chr1_4:67609687-67609706 Msa0179900:intron 30.0%
ACTTGTGTTTCAAGATAAGA+AGG + chr1_4:67609717-67609736 Msa0179900:CDS 30.0%
AATAGAAGAGTTGTCAAAGA+TGG + chr1_4:67609798-67609817 Msa0179900:CDS 30.0%
ACAAATTTGGGAATAGAAGT+GGG - chr1_4:67609935-67609954 None:intergenic 30.0%
AACAAATTTGGGAATAGAAG+TGG - chr1_4:67609936-67609955 None:intergenic 30.0%
! TCATACTTTTCCATCTTATC+TGG - chr1_4:67609984-67610003 None:intergenic 30.0%
! GATATGAGAGTTTTCAAAGA+AGG + chr1_4:67610047-67610066 Msa0179900:CDS 30.0%
! AGTTTTCAAAGAAGGAATGA+TGG + chr1_4:67610055-67610074 Msa0179900:CDS 30.0%
GTCCCAAAAGTAAATCTTTA+TGG - chr1_4:67610094-67610113 None:intergenic 30.0%
AGTTGCATTTCAAGATAAGA+TGG + chr1_4:67610298-67610317 Msa0179900:CDS 30.0%
! TAGAGTTTTCAAAGAAGGAA+TGG + chr1_4:67610379-67610398 Msa0179900:CDS 30.0%
! AAAGAACAAAATGGTGGTGA+TGG + chr1_4:67600355-67600374 Msa0179900:intron 35.0%
TTGATTACAATCCTGTGTGT+AGG + chr1_4:67600396-67600415 Msa0179900:intron 35.0%
TTATAGATCAACCTACACAC+AGG - chr1_4:67600410-67600429 None:intergenic 35.0%
CATGAGGAGTAGTAATATTC+AGG + chr1_4:67600525-67600544 Msa0179900:intron 35.0%
CAATCTCTGTCTTACATAAC+TGG + chr1_4:67600724-67600743 Msa0179900:intron 35.0%
! ATGTATTGACATCTATGCAG+CGG + chr1_4:67601055-67601074 Msa0179900:intron 35.0%
GGCATTTGTAATACAAACTC+AGG + chr1_4:67601441-67601460 Msa0179900:intron 35.0%
CAGAACCCAAAATTCAATGA+AGG - chr1_4:67601677-67601696 None:intergenic 35.0%
!!! AATCAAGGGTTTTGTTCTTC+TGG - chr1_4:67601738-67601757 None:intergenic 35.0%
AGAAGAACAAAACCCTTGAT+TGG + chr1_4:67601737-67601756 Msa0179900:intron 35.0%
TTCATTGCATCACCAATCAA+GGG - chr1_4:67601752-67601771 None:intergenic 35.0%
!! AGGTGATGGATTATCATTCA+AGG + chr1_4:67601777-67601796 Msa0179900:intron 35.0%
!!! TGCAGAAGAAGAAGGTTTTT+TGG + chr1_4:67601848-67601867 Msa0179900:intron 35.0%
ACACTCTGCAAAGTATACAA+TGG - chr1_4:67602001-67602020 None:intergenic 35.0%
CAAGCGCATAGAAATTGTAT+CGG + chr1_4:67602055-67602074 Msa0179900:intron 35.0%
!! CTTGATACTTAGGCTTTGTT+TGG + chr1_4:67602223-67602242 Msa0179900:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr1_4:67602286-67602305 Msa0179900:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG + chr1_4:67602290-67602309 Msa0179900:intron 35.0%
TAAAAAATCCCCCTCATTTG+GGG + chr1_4:67602346-67602365 Msa0179900:intron 35.0%
!!! TTTTAAGTTCCCCCAAATGA+GGG - chr1_4:67602359-67602378 None:intergenic 35.0%
!!! TTTTTAAGTTCCCCCAAATG+AGG - chr1_4:67602360-67602379 None:intergenic 35.0%
CTTAAAAATTGTATTGGGGG+AGG + chr1_4:67602372-67602391 Msa0179900:intron 35.0%
!! GATGATTCTAAGGCTTTGTT+TGG - chr1_4:67602607-67602626 None:intergenic 35.0%
TTAACAAATATGTGCTCCCT+TGG + chr1_4:67602876-67602895 Msa0179900:intron 35.0%
CAAAAACCAGTTTCTACCAA+GGG - chr1_4:67602895-67602914 None:intergenic 35.0%
ACAAAAACCAGTTTCTACCA+AGG - chr1_4:67602896-67602915 None:intergenic 35.0%
! CTTCTTTTTGTTGAACCCAT+TGG + chr1_4:67602917-67602936 Msa0179900:intron 35.0%
ACATCTGAGTTTGAATGAGT+TGG - chr1_4:67602966-67602985 None:intergenic 35.0%
CTCACATTAGATATGTGCTT+TGG - chr1_4:67603143-67603162 None:intergenic 35.0%
!! TGGGGTGATTTTGAAAATGT+CGG - chr1_4:67603350-67603369 None:intergenic 35.0%
TAGGTAAACTCGTTGTAAGT+GGG - chr1_4:67603369-67603388 None:intergenic 35.0%
ATAGGTAAACTCGTTGTAAG+TGG - chr1_4:67603370-67603389 None:intergenic 35.0%
GAGAGTCCAAACAAGTAAAT+AGG - chr1_4:67603388-67603407 None:intergenic 35.0%
TGTGGATAGCAAGTAATCAA+AGG - chr1_4:67603579-67603598 None:intergenic 35.0%
! AAGTGAGTTACGATCAGTTT+TGG + chr1_4:67603623-67603642 Msa0179900:intron 35.0%
TACATTGAAAACTCTGAGCA+AGG + chr1_4:67603834-67603853 Msa0179900:intron 35.0%
AAGCTGTGTTTCATGATAAG+AGG + chr1_4:67604124-67604143 Msa0179900:CDS 35.0%
GTGAAACTCCTACAAGATTT+CGG + chr1_4:67604165-67604184 Msa0179900:CDS 35.0%
!! GGTGTTTTTAACAGCAGTTA+AGG + chr1_4:67604362-67604381 Msa0179900:intron 35.0%
GATGTAAGAGTTGTCAAAGA+AGG + chr1_4:67604459-67604478 Msa0179900:CDS 35.0%
AGTTGTCAAAGAAGGAATGA+TGG + chr1_4:67604467-67604486 Msa0179900:CDS 35.0%
TGTTGTAAATCATCAGCCAA+TGG - chr1_4:67604567-67604586 None:intergenic 35.0%
! AGCGTTTTTAACAGCAGTTA+AGG + chr1_4:67604620-67604639 Msa0179900:intron 35.0%
AGATAAGATGGAAATGTTCG+AGG + chr1_4:67604653-67604672 Msa0179900:CDS 35.0%
ACACAAAATCTCACTTCCAT+TGG + chr1_4:67604806-67604825 Msa0179900:CDS 35.0%
AAAATCTCACTTCCATTGGA+TGG + chr1_4:67604810-67604829 Msa0179900:CDS 35.0%
GATGAACAACAAGATGAAGA+CGG + chr1_4:67604834-67604853 Msa0179900:CDS 35.0%
ACAAGCTTGATTACAATCGT+CGG + chr1_4:67604896-67604915 Msa0179900:intron 35.0%
!! ATGGATATGATTTGTTGTCC+TGG + chr1_4:67605154-67605173 Msa0179900:intron 35.0%
ACAAGATCCATCATGATTGT+AGG - chr1_4:67605363-67605382 None:intergenic 35.0%
TTTGCACACTCTCTTATCTA+TGG - chr1_4:67605388-67605407 None:intergenic 35.0%
CCGGTTATCTTAGAATCATT+TGG - chr1_4:67605467-67605486 None:intergenic 35.0%
ATAGTGATTACTTTGCATGC+CGG - chr1_4:67605486-67605505 None:intergenic 35.0%
! ATAAATTTTGCCTCCTCCAA+AGG - chr1_4:67605652-67605671 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - chr1_4:67606037-67606056 None:intergenic 35.0%
GTGTGCAGAATATTAATTGG+AGG + chr1_4:67606175-67606194 Msa0179900:intron 35.0%
!! AAGCGACACTCATTTTGAAA+TGG + chr1_4:67606240-67606259 Msa0179900:intron 35.0%
!!! GACACTCATTTTGAAATGGA+GGG + chr1_4:67606280-67606299 Msa0179900:intron 35.0%
! GGGAGTATGAAACTATATCT+AGG + chr1_4:67606300-67606319 Msa0179900:intron 35.0%
AAGTGCTTCATTTGTGTTGT+AGG - chr1_4:67606378-67606397 None:intergenic 35.0%
! TTGCTTTACTGTCTAGGATT+TGG - chr1_4:67606418-67606437 None:intergenic 35.0%
GTCTGTCAGAAAGAAACAAA+AGG + chr1_4:67606711-67606730 Msa0179900:intron 35.0%
! CCTTTTCAATGTTTGAGCAT+TGG - chr1_4:67606741-67606760 None:intergenic 35.0%
CCAATGCTCAAACATTGAAA+AGG + chr1_4:67606738-67606757 Msa0179900:intron 35.0%
! TTTTGTGTGCTTGGAACATA+TGG - chr1_4:67606905-67606924 None:intergenic 35.0%
TAATTACACATGAGGTCAGA+AGG - chr1_4:67606958-67606977 None:intergenic 35.0%
TAGGACAAGACAAAAACAAG+TGG + chr1_4:67607069-67607088 Msa0179900:intron 35.0%
AGGACAAGACAAAAACAAGT+GGG + chr1_4:67607070-67607089 Msa0179900:intron 35.0%
TCTTTGCATGAAGACTTCTT+CGG - chr1_4:67607182-67607201 None:intergenic 35.0%
GCAAAGATTGACACTTTCAA+AGG + chr1_4:67607195-67607214 Msa0179900:intron 35.0%
! AAATCAAGACGATATCGGTT+AGG - chr1_4:67607483-67607502 None:intergenic 35.0%
TGATAATATTTGCAGGAGTC+GGG + chr1_4:67607934-67607953 Msa0179900:intron 35.0%
! TCTCGAAAAGTAGAGTGTTT+GGG - chr1_4:67607968-67607987 None:intergenic 35.0%
! ATCTCGAAAAGTAGAGTGTT+TGG - chr1_4:67607969-67607988 None:intergenic 35.0%
TTACGGTTATAATCATGTGC+TGG + chr1_4:67608440-67608459 Msa0179900:intron 35.0%
AAACAAATGTAAGAGGAGTC+AGG + chr1_4:67608487-67608506 Msa0179900:intron 35.0%
!!! TGTTTTTAAAACCCGGAAGA+AGG - chr1_4:67608810-67608829 None:intergenic 35.0%
AAATAGAACGTAGTGATGTG+AGG + chr1_4:67608834-67608853 Msa0179900:intron 35.0%
AACTACACAGAAACGCAAAT+GGG - chr1_4:67608881-67608900 None:intergenic 35.0%
AAACTACACAGAAACGCAAA+TGG - chr1_4:67608882-67608901 None:intergenic 35.0%
TAACAAAATGTAGTGCTACG+TGG - chr1_4:67608913-67608932 None:intergenic 35.0%
TTGATGAGGTAAAAGGTCAA+GGG - chr1_4:67609557-67609576 None:intergenic 35.0%
AGCAGAACCCAAAATTCAAA+AGG - chr1_4:67609606-67609625 None:intergenic 35.0%
TGAAACTCCTACATGATTTC+AGG + chr1_4:67609758-67609777 Msa0179900:CDS 35.0%
GAAACTCCTACATGATTTCA+GGG + chr1_4:67609759-67609778 Msa0179900:CDS 35.0%
AGTTGTCAAAGATGGAGTTA+TGG + chr1_4:67609806-67609825 Msa0179900:CDS 35.0%
CTGCTGTTGCAAACAAATTT+GGG - chr1_4:67609947-67609966 None:intergenic 35.0%
ACTGCTGTTGCAAACAAATT+TGG - chr1_4:67609948-67609967 None:intergenic 35.0%
AGTTGCATTTCCAGATAAGA+TGG + chr1_4:67609971-67609990 Msa0179900:CDS 35.0%
ACACAAAATCTCACTTCCAT+TGG + chr1_4:67604806-67604825 Msa0179900:CDS 35.0%
AAAATCTCACTTCCATTGGA+TGG + chr1_4:67604810-67604829 Msa0179900:CDS 35.0%
! CAGAATGATGATGAACAACA+AGG + chr1_4:67610206-67610225 Msa0179900:CDS 35.0%
! AGTTTTCAAAGAAGGAATGG+TGG + chr1_4:67610382-67610401 Msa0179900:CDS 35.0%
ACACAAAATCTCACTTCCAT+TGG + chr1_4:67604806-67604825 Msa0179900:CDS 35.0%
AAAATCTCACTTCCATTGGA+TGG + chr1_4:67604810-67604829 Msa0179900:CDS 35.0%
!! TGAACTTCAAGTTGATGAAG+TGG + chr1_4:67610577-67610596 Msa0179900:CDS 35.0%
CATCATCATCCAATGGAAGT+GGG - chr1_4:67600330-67600349 None:intergenic 40.0%
TCATCATCATCCAATGGAAG+TGG - chr1_4:67600331-67600350 None:intergenic 40.0%
AATAGACACATAAGACGGAG+AGG - chr1_4:67600571-67600590 None:intergenic 40.0%
CTCTGTCTTACATAACTGGT+AGG + chr1_4:67600728-67600747 Msa0179900:intron 40.0%
TGCATGCTTTGTGGGATATA+TGG + chr1_4:67601252-67601271 Msa0179900:intron 40.0%
TGCGCCTCAATTTACGTATT+TGG + chr1_4:67601316-67601335 Msa0179900:intron 40.0%
GTTCATTGCATCACCAATCA+AGG - chr1_4:67601753-67601772 None:intergenic 40.0%
! TGGTGATGCAATGAACAACA+AGG + chr1_4:67601757-67601776 Msa0179900:intron 40.0%
TGCAATGAACAACAAGGTGA+TGG + chr1_4:67601763-67601782 Msa0179900:intron 40.0%
ATCGTGTATGCAGAAGAAGA+AGG + chr1_4:67601840-67601859 Msa0179900:intron 40.0%
! GGTCCTTTTTGCTCTTTTCT+TGG + chr1_4:67601869-67601888 Msa0179900:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr1_4:67602231-67602250 Msa0179900:intron 40.0%
!!! AGGAGAGGGTTTTGGAAAAA+AGG + chr1_4:67602254-67602273 Msa0179900:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + chr1_4:67602258-67602277 Msa0179900:intron 40.0%
AAAAAATCCCCCTCATTTGG+GGG + chr1_4:67602347-67602366 Msa0179900:intron 40.0%
! TTTAAGTTCCCCCAAATGAG+GGG - chr1_4:67602358-67602377 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - chr1_4:67602599-67602618 None:intergenic 40.0%
TCAAACTCAGATGTTTGCCT+TGG + chr1_4:67602972-67602991 Msa0179900:intron 40.0%
AGGTAAACTCGTTGTAAGTG+GGG - chr1_4:67603368-67603387 None:intergenic 40.0%
! TAGAACATTGAGTGATGGTG+TGG - chr1_4:67603597-67603616 None:intergenic 40.0%
CCAACTAGAACATTGAGTGA+TGG - chr1_4:67603602-67603621 None:intergenic 40.0%
CCATCACTCAATGTTCTAGT+TGG + chr1_4:67603599-67603618 Msa0179900:intron 40.0%
GTCTTTGTGAGAGAGTTCTA+AGG + chr1_4:67603770-67603789 Msa0179900:intron 40.0%
GAGAGTGAGGACAAGAAAAT+TGG - chr1_4:67603863-67603882 None:intergenic 40.0%
TTGAGCTGTTCATCTTGAAG+GGG - chr1_4:67604053-67604072 None:intergenic 40.0%
CTTGAGCTGTTCATCTTGAA+GGG - chr1_4:67604054-67604073 None:intergenic 40.0%
TCTTGAGCTGTTCATCTTGA+AGG - chr1_4:67604055-67604074 None:intergenic 40.0%
GATAGAAGAGTCGTCAAAGA+AGG + chr1_4:67604201-67604220 Msa0179900:CDS 40.0%
AGTCGTCAAAGAAGGAGTTA+TGG + chr1_4:67604209-67604228 Msa0179900:CDS 40.0%
GGCAAGAAGATGTTGAATCT+TGG - chr1_4:67604264-67604283 None:intergenic 40.0%
! ATTGAGATTTTGTGTCCCTC+TGG - chr1_4:67604543-67604562 None:intergenic 40.0%
! TTTTGGCATGGTAATCAGCT+AGG - chr1_4:67604692-67604711 None:intergenic 40.0%
TGTTGTTCATCACCATCCAA+TGG - chr1_4:67604825-67604844 None:intergenic 40.0%
GAGTTGAAAGATGCACAGAA+AGG + chr1_4:67604861-67604880 Msa0179900:CDS 40.0%
CCATCATGATTGTAGGTATC+AGG - chr1_4:67605356-67605375 None:intergenic 40.0%
CCTGATACCTACAATCATGA+TGG + chr1_4:67605353-67605372 Msa0179900:intron 40.0%
!! ATGTTTTGTTCCACCACCTT+TGG + chr1_4:67605633-67605652 Msa0179900:intron 40.0%
GGTATGACATAAAAAAGGGG+TGG + chr1_4:67605876-67605895 Msa0179900:intron 40.0%
ACCATTATCATGCACTATGC+AGG + chr1_4:67605967-67605986 Msa0179900:intron 40.0%
ACCTGCATAGTGCATGATAA+TGG - chr1_4:67605971-67605990 None:intergenic 40.0%
!! AAACGGAGGGAGTATTTGTT+TGG - chr1_4:67606024-67606043 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG - chr1_4:67606038-67606057 None:intergenic 40.0%
!!! CGACACTCATTTTGAAATGG+AGG + chr1_4:67606279-67606298 Msa0179900:intron 40.0%
! CTTTACTGTCTAGGATTTGG+TGG - chr1_4:67606415-67606434 None:intergenic 40.0%
! GGAAAGTTGCTTTACTGTCT+AGG - chr1_4:67606424-67606443 None:intergenic 40.0%
TTAAGTCACATTCGTTGTGG+TGG - chr1_4:67606818-67606837 None:intergenic 40.0%
TATGGAACGAACGCAATTGT+AGG - chr1_4:67606887-67606906 None:intergenic 40.0%
!!! TGATTTGGCTTTTGTGTGCT+TGG - chr1_4:67606914-67606933 None:intergenic 40.0%
GTCCTACTTTCAGTGCTTTA+TGG - chr1_4:67607055-67607074 None:intergenic 40.0%
CCGTGACATTATTCCTACAA+CGG - chr1_4:67607138-67607157 None:intergenic 40.0%
CCGTTGTAGGAATAATGTCA+CGG + chr1_4:67607135-67607154 Msa0179900:intron 40.0%
CTTCGGGACTAGATTCAATT+TGG - chr1_4:67607165-67607184 None:intergenic 40.0%
CTTTGCATGAAGACTTCTTC+GGG - chr1_4:67607181-67607200 None:intergenic 40.0%
!! TTATGACTTGCTGACATCTC+AGG - chr1_4:67607271-67607290 None:intergenic 40.0%
AGGACAATATTCCCGATTCT+TGG - chr1_4:67607339-67607358 None:intergenic 40.0%
!! TATGTTTTTGTTGGGGTGAG+AGG - chr1_4:67607458-67607477 None:intergenic 40.0%
GATAATATTTGCAGGAGTCG+GGG + chr1_4:67607935-67607954 Msa0179900:intron 40.0%
! CTCGAAAAGTAGAGTGTTTG+GGG - chr1_4:67607967-67607986 None:intergenic 40.0%
AAACCAAACACACCCAAAGT+GGG - chr1_4:67608120-67608139 None:intergenic 40.0%
GAGTATGGGAAGAGAGAAAA+AGG + chr1_4:67608176-67608195 Msa0179900:intron 40.0%
GAGAGAACAAAGGGTAATTC+TGG + chr1_4:67608509-67608528 Msa0179900:intron 40.0%
ATTAGAGAAGAGAGACACTC+AGG - chr1_4:67608613-67608632 None:intergenic 40.0%
AATGCCACCTTTCTTCAGTT+TGG - chr1_4:67608647-67608666 None:intergenic 40.0%
ATACGTAGTGAGTAACGAGT+AGG + chr1_4:67608984-67609003 Msa0179900:intron 40.0%
GGGGTATGTGACGATTAATT+TGG - chr1_4:67609031-67609050 None:intergenic 40.0%
!!! ACAATTTTTAGCTGCCGTCT+TGG + chr1_4:67609189-67609208 Msa0179900:intron 40.0%
!!! CAATTTTTAGCTGCCGTCTT+GGG + chr1_4:67609190-67609209 Msa0179900:intron 40.0%
! GTTGATGAGGTAAAAGGTCA+AGG - chr1_4:67609558-67609577 None:intergenic 40.0%
GTCATTGCTTCACCAATCAA+GGG - chr1_4:67609679-67609698 None:intergenic 40.0%
! TTTTGGCCCTGAAATCATGT+AGG - chr1_4:67609768-67609787 None:intergenic 40.0%
GTGGCAAGAAGAATAGAAGT+GGG - chr1_4:67609899-67609918 None:intergenic 40.0%
!!! TACTTTTGGGACTCAACACT+TGG + chr1_4:67610102-67610121 Msa0179900:CDS 40.0%
TGTTGTTCATCACCATCCAA+TGG - chr1_4:67604825-67604844 None:intergenic 40.0%
! TTGGATGGTGATGAACAACA+AGG + chr1_4:67604825-67604844 Msa0179900:CDS 40.0%
GATGATGAACAACAAGGTGA+TGG + chr1_4:67610212-67610231 Msa0179900:CDS 40.0%
!! TGAACAACAAGGTGATGGAT+CGG + chr1_4:67601768-67601787 Msa0179900:intron 40.0%
!!! TACTTTTGGGACTCAACACT+TGG + chr1_4:67610102-67610121 Msa0179900:CDS 40.0%
TGTTGTTCATCACCATCCAA+TGG - chr1_4:67604825-67604844 None:intergenic 40.0%
! TTGGATGGTGATGAACAACA+AGG + chr1_4:67604825-67604844 Msa0179900:CDS 40.0%
GATGAACAACAAGGTGATGA+TGG + chr1_4:67610491-67610510 Msa0179900:CDS 40.0%
CAGAAAGATGCTGAACAACA+AGG + chr1_4:67610533-67610552 Msa0179900:CDS 40.0%
! TTCAACACCTTTTTGCCACC+AGG + chr1_4:67600298-67600317 Msa0179900:CDS 45.0%
GATTTCTCCTGGTGGCAAAA+AGG - chr1_4:67600308-67600327 None:intergenic 45.0%
AATGGAAGTGGGATTTCTCC+TGG - chr1_4:67600319-67600338 None:intergenic 45.0%
AGGAGAAATCCCACTTCCAT+TGG + chr1_4:67600318-67600337 Msa0179900:CDS 45.0%
! TCTGGAGCTGTTCATCTTGA+AGG - chr1_4:67601720-67601739 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr1_4:67602267-67602286 Msa0179900:intron 45.0%
ATAGAAGACATTGGGAGGAG+AGG + chr1_4:67602295-67602314 Msa0179900:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG + chr1_4:67602296-67602315 Msa0179900:intron 45.0%
TTAAGTTCCCCCAAATGAGG+GGG - chr1_4:67602357-67602376 None:intergenic 45.0%
! ATTGTATTGGGGGAGGGTTT+TGG + chr1_4:67602379-67602398 Msa0179900:intron 45.0%
! TTGTATTGGGGGAGGGTTTT+GGG + chr1_4:67602380-67602399 Msa0179900:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_4:67602236-67602255 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr1_4:67602235-67602254 None:intergenic 45.0%
ACTCAGATGTTTGCCTTGGA+TGG + chr1_4:67602976-67602995 Msa0179900:intron 45.0%
AATGTCAACTCCACCATCCA+AGG - chr1_4:67602992-67603011 None:intergenic 45.0%
TTTGGACTCTCACATTCGCA+TGG + chr1_4:67603397-67603416 Msa0179900:intron 45.0%
AACTGCATGAGAAGAGAGTG+AGG - chr1_4:67603876-67603895 None:intergenic 45.0%
TTCCCTTGATTGACGATGCA+AGG + chr1_4:67604082-67604101 Msa0179900:intron 45.0%
TCCCTTGATTGACGATGCAA+GGG + chr1_4:67604083-67604102 Msa0179900:intron 45.0%
!! TTTTGGCGCCGAAATCTTGT+AGG - chr1_4:67604176-67604195 None:intergenic 45.0%
TTCAACATCTTCTTGCCACC+AGG + chr1_4:67604267-67604286 Msa0179900:CDS 45.0%
AGTGAGATTTCATGTCCTGG+TGG - chr1_4:67604285-67604304 None:intergenic 45.0%
GGAAGTGAGATTTCATGTCC+TGG - chr1_4:67604288-67604307 None:intergenic 45.0%
ACCATTGCTTCATCTTCGAG+CGG - chr1_4:67604345-67604364 None:intergenic 45.0%
! TTTTGGCACGGTAATCAGCT+AGG - chr1_4:67604434-67604453 None:intergenic 45.0%
ATTCAACACCTTCTTGCCAG+AGG + chr1_4:67604524-67604543 Msa0179900:CDS 45.0%
TTCAACACCTTCTTGCCAGA+GGG + chr1_4:67604525-67604544 Msa0179900:CDS 45.0%
ATTCAACACCTTCTTGCCAG+AGG + chr1_4:67604524-67604543 Msa0179900:CDS 45.0%
TTCAACACCTTCTTGCCAGA+GGG + chr1_4:67604525-67604544 Msa0179900:CDS 45.0%
! AGTGAGATTTTGTGTCCCTC+TGG - chr1_4:67604801-67604820 None:intergenic 45.0%
TCGAACCTAGCAAACTGAGA+TGG + chr1_4:67605425-67605444 Msa0179900:intron 45.0%
ACCTAGCAAACTGAGATGGA+AGG + chr1_4:67605429-67605448 Msa0179900:intron 45.0%
CCTAGCAAACTGAGATGGAA+GGG + chr1_4:67605430-67605449 Msa0179900:intron 45.0%
! TTTTGTTCCACCACCTTTGG+AGG + chr1_4:67605636-67605655 Msa0179900:intron 45.0%
! AATTTTGCCTCCTCCAAAGG+TGG - chr1_4:67605649-67605668 None:intergenic 45.0%
AACGTGATCACTTCAGCACA+AGG + chr1_4:67606658-67606677 Msa0179900:intron 45.0%
AAGGCGTGCCAAAGAAAACA+CGG + chr1_4:67606677-67606696 Msa0179900:intron 45.0%
!!! TTGGATTGGTTTTGATGGGG+TGG - chr1_4:67607018-67607037 None:intergenic 45.0%
!!! GGCTTGGATTGGTTTTGATG+GGG - chr1_4:67607021-67607040 None:intergenic 45.0%
!!! GGGCTTGGATTGGTTTTGAT+GGG - chr1_4:67607022-67607041 None:intergenic 45.0%
!! GGCCATAAAGCACTGAAAGT+AGG + chr1_4:67607050-67607069 Msa0179900:intron 45.0%
ACATTATTCCTACAACGGCG+CGG - chr1_4:67607133-67607152 None:intergenic 45.0%
! GGACCTTTTTGTGCCAAATG+AGG + chr1_4:67607217-67607236 Msa0179900:intron 45.0%
GGACCTCATTTGGCACAAAA+AGG - chr1_4:67607223-67607242 None:intergenic 45.0%
TGGCTCTTGGAATTCGAATG+GGG - chr1_4:67607313-67607332 None:intergenic 45.0%
GTGGCTCTTGGAATTCGAAT+GGG - chr1_4:67607314-67607333 None:intergenic 45.0%
AGTGGCTCTTGGAATTCGAA+TGG - chr1_4:67607315-67607334 None:intergenic 45.0%
ATATTCCCGATTCTTGGCAG+TGG - chr1_4:67607333-67607352 None:intergenic 45.0%
! AGAGATGTTACAGGGGTGTA+GGG - chr1_4:67607386-67607405 None:intergenic 45.0%
! AAGAGATGTTACAGGGGTGT+AGG - chr1_4:67607387-67607406 None:intergenic 45.0%
TGGGAGGAAGAGATGTTACA+GGG - chr1_4:67607394-67607413 None:intergenic 45.0%
CAAACCAAACACACCCAAAG+TGG - chr1_4:67608121-67608140 None:intergenic 45.0%
CACTTTGGGTGTGTTTGGTT+TGG + chr1_4:67608119-67608138 Msa0179900:intron 45.0%
AGGAGTCAGGAGAGAACAAA+GGG + chr1_4:67608500-67608519 Msa0179900:intron 45.0%
!!! TTTTGGGGTCTTCGCAAATC+TGG - chr1_4:67608574-67608593 None:intergenic 45.0%
TGCACCAAACTGAAGAAAGG+TGG + chr1_4:67608640-67608659 Msa0179900:intron 45.0%
GTCTCAACTGTGTTTGGTTG+AGG - chr1_4:67608714-67608733 None:intergenic 45.0%
TTTGGCGTCTCAACTGTGTT+TGG - chr1_4:67608720-67608739 None:intergenic 45.0%
AAACACAGTTGAGACGCCAA+AGG + chr1_4:67608719-67608738 Msa0179900:intron 45.0%
TTTCCCGTTCTTCCTTCTTC+CGG + chr1_4:67608795-67608814 Msa0179900:intron 45.0%
AAACCCGGAAGAAGGAAGAA+CGG - chr1_4:67608802-67608821 None:intergenic 45.0%
AGAACGTAGTGATGTGAGGA+AGG + chr1_4:67608838-67608857 Msa0179900:intron 45.0%
GAACGTAGTGATGTGAGGAA+GGG + chr1_4:67608839-67608858 Msa0179900:intron 45.0%
AACGTAGTGATGTGAGGAAG+GGG + chr1_4:67608840-67608859 Msa0179900:intron 45.0%
!! GGCATTGGCAATAGAAACAC+AGG + chr1_4:67609396-67609415 Msa0179900:intron 45.0%
CGTCATTGCTTCACCAATCA+AGG - chr1_4:67609680-67609699 None:intergenic 45.0%
TTCAACATCTTCTTGCCACC+AGG + chr1_4:67604267-67604286 Msa0179900:CDS 45.0%
AGAAGTGGGATTTCATGTCC+TGG - chr1_4:67609885-67609904 None:intergenic 45.0%
GGTGGCAAGAAGAATAGAAG+TGG - chr1_4:67609900-67609919 None:intergenic 45.0%
CTTCTATTCTTCTTGCCACC+AGG + chr1_4:67609900-67609919 Msa0179900:CDS 45.0%
AGAAGTGGGAATTCATGTCC+TGG - chr1_4:67609921-67609940 None:intergenic 45.0%
! AGTGAGATTTTGTGTCCCAC+TGG - chr1_4:67610131-67610150 None:intergenic 45.0%
! GATGGTGATGAACAACAAGG+TGG + chr1_4:67610158-67610177 Msa0179900:CDS 45.0%
GATGAACAACAAGGTGGAGA+TGG + chr1_4:67610164-67610183 Msa0179900:CDS 45.0%
! AGTGAGATTTTGTGTCCTGC+TGG - chr1_4:67610458-67610477 None:intergenic 45.0%
GATGCTGAACAACAAGGTGA+TGG + chr1_4:67610539-67610558 Msa0179900:CDS 45.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_4:67602234-67602253 Msa0179900:intron 50.0%
TGTTTGGGAGTTTGGAGGAG+AGG + chr1_4:67602239-67602258 Msa0179900:intron 50.0%
GTTTGGGAGTTTGGAGGAGA+GGG + chr1_4:67602240-67602259 Msa0179900:intron 50.0%
! GAGTTTGGAGGAGAGGGTTT+TGG + chr1_4:67602246-67602265 Msa0179900:intron 50.0%
!!! AGGGTTTTGGGAGGTTATGG+AGG + chr1_4:67602392-67602411 Msa0179900:intron 50.0%
!!! GGGTTTTGGGAGGTTATGGA+GGG + chr1_4:67602393-67602412 Msa0179900:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr1_4:67602589-67602608 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr1_4:67602234-67602253 None:intergenic 50.0%
TGTGCTCCCTTGGTAGAAAC+TGG + chr1_4:67602886-67602905 Msa0179900:intron 50.0%
CAGATGTTTGCCTTGGATGG+TGG + chr1_4:67602979-67602998 Msa0179900:intron 50.0%
GCCCTTGCATCGTCAATCAA+GGG - chr1_4:67604087-67604106 None:intergenic 50.0%
!! CGATGCAAGGGCGTTTGTAA+AGG + chr1_4:67604095-67604114 Msa0179900:intron 50.0%
ACCGCTCGAAGATGAAGCAA+TGG + chr1_4:67604341-67604360 Msa0179900:CDS 50.0%
!! GGCAAGAAGGTGTTGAATCC+CGG - chr1_4:67604522-67604541 None:intergenic 50.0%
TTTGTGTCCCTCTGGCAAGA+AGG - chr1_4:67604535-67604554 None:intergenic 50.0%
TTTGTGTCCCTCTGGCAAGA+AGG - chr1_4:67604535-67604554 None:intergenic 50.0%
! CCCTTCCATCTCAGTTTGCT+AGG - chr1_4:67605433-67605452 None:intergenic 50.0%
TGTGAGGTTGCAACTTGTCG+TGG - chr1_4:67606550-67606569 None:intergenic 50.0%
!! TTGTTTTCGGGACTCAGTCC+TGG - chr1_4:67606773-67606792 None:intergenic 50.0%
ACACATGAGGTCAGAAGGAG+CGG - chr1_4:67606953-67606972 None:intergenic 50.0%
!! TTTTGATGGGGTGGACTCTC+AGG - chr1_4:67607009-67607028 None:intergenic 50.0%
!!! CGGGCTTGGATTGGTTTTGA+TGG - chr1_4:67607023-67607042 None:intergenic 50.0%
GGCTCTTGGAATTCGAATGG+GGG - chr1_4:67607312-67607331 None:intergenic 50.0%
CAAGAGCCACTGCCAAGAAT+CGG + chr1_4:67607324-67607343 Msa0179900:intron 50.0%
AAGAGCCACTGCCAAGAATC+GGG + chr1_4:67607325-67607344 Msa0179900:intron 50.0%
GGGAGGAAGAGATGTTACAG+GGG - chr1_4:67607393-67607412 None:intergenic 50.0%
GTGGGAGGAAGAGATGTTAC+AGG - chr1_4:67607395-67607414 None:intergenic 50.0%
CTGGACTCGCAATATTGGTG+GGG - chr1_4:67607831-67607850 None:intergenic 50.0%
CCTGGACTCGCAATATTGGT+GGG - chr1_4:67607832-67607851 None:intergenic 50.0%
ACCTGGACTCGCAATATTGG+TGG - chr1_4:67607833-67607852 None:intergenic 50.0%
AACTCAGGGGAAGAAGTCAG+GGG - chr1_4:67607859-67607878 None:intergenic 50.0%
GAACTCAGGGGAAGAAGTCA+GGG - chr1_4:67607860-67607879 None:intergenic 50.0%
TGAACTCAGGGGAAGAAGTC+AGG - chr1_4:67607861-67607880 None:intergenic 50.0%
TGACTTCTTCCCCTGAGTTC+AGG + chr1_4:67607860-67607879 Msa0179900:intron 50.0%
AGTTCACAAGGACTTCTCCC+AGG - chr1_4:67607892-67607911 None:intergenic 50.0%
GATCCCACTTTGGGTGTGTT+TGG + chr1_4:67608114-67608133 Msa0179900:intron 50.0%
GAGGAGTCAGGAGAGAACAA+AGG + chr1_4:67608499-67608518 Msa0179900:intron 50.0%
CGAAGACCCCAAAAAGCAGT+GGG + chr1_4:67608580-67608599 Msa0179900:intron 50.0%
!!! ATGGGACCCACTGCTTTTTG+GGG - chr1_4:67608589-67608608 None:intergenic 50.0%
!!! CATGGGACCCACTGCTTTTT+GGG - chr1_4:67608590-67608609 None:intergenic 50.0%
GAAGAGAGACACTCAGGCAT+GGG - chr1_4:67608607-67608626 None:intergenic 50.0%
AGAAGAGAGACACTCAGGCA+TGG - chr1_4:67608608-67608627 None:intergenic 50.0%
CGCTGCACCAAACTGAAGAA+AGG + chr1_4:67608637-67608656 Msa0179900:intron 50.0%
TGGAGAGTGATGGTTGCCTT+TGG - chr1_4:67608738-67608757 None:intergenic 50.0%
GACGTACGATTGGAGAGTGA+TGG - chr1_4:67608748-67608767 None:intergenic 50.0%
!! CGTCGTCGTGTAGGTTTTGA+CGG + chr1_4:67608764-67608783 Msa0179900:intron 50.0%
TTCCCGTTCTTCCTTCTTCC+GGG + chr1_4:67608796-67608815 Msa0179900:intron 50.0%
AACCCGGAAGAAGGAAGAAC+GGG - chr1_4:67608801-67608820 None:intergenic 50.0%
TGTAGTGCTACGTGGCAAAG+TGG - chr1_4:67608905-67608924 None:intergenic 50.0%
CTGGAGCTGTTCATCTCGAA+GGG - chr1_4:67609646-67609665 None:intergenic 50.0%
ACTGGAGCTGTTCATCTCGA+AGG - chr1_4:67609647-67609666 None:intergenic 50.0%
AGTGGGATTTCATGTCCTGG+TGG - chr1_4:67609882-67609901 None:intergenic 50.0%
AGTGGGAATTCATGTCCTGG+TGG - chr1_4:67609918-67609937 None:intergenic 50.0%
ACTCAACACTTGGTTGCCAG+TGG + chr1_4:67610112-67610131 Msa0179900:CDS 50.0%
CTCAACACTTGGTTGCCAGT+GGG + chr1_4:67610113-67610132 Msa0179900:CDS 50.0%
GGAAGTGGGATTTCTCCTGG+TGG - chr1_4:67600316-67600335 None:intergenic 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr1_4:67602302-67602321 Msa0179900:intron 55.0%
!!! TATTGGGGGAGGGTTTTGGG+AGG + chr1_4:67602383-67602402 Msa0179900:intron 55.0%
!!! GGGAGGGTTTTGGGAGGTTA+TGG + chr1_4:67602389-67602408 Msa0179900:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr1_4:67602590-67602609 None:intergenic 55.0%
CGCCCTTGCATCGTCAATCA+AGG - chr1_4:67604088-67604107 None:intergenic 55.0%
! TGTTCCACCACCTTTGGAGG+AGG + chr1_4:67605639-67605658 Msa0179900:intron 55.0%
TTTGCCTCCTCCAAAGGTGG+TGG - chr1_4:67605646-67605665 None:intergenic 55.0%
TTGAAAAGGGCCTGACCACC+AGG + chr1_4:67606752-67606771 Msa0179900:intron 55.0%
!! TTTTCGGGACTCAGTCCTGG+TGG - chr1_4:67606770-67606789 None:intergenic 55.0%
GTCACATTCGTTGTGGTGGC+TGG - chr1_4:67606814-67606833 None:intergenic 55.0%
TGCTTTATGGCCGCTAGTGC+GGG - chr1_4:67607042-67607061 None:intergenic 55.0%
GTGCTTTATGGCCGCTAGTG+CGG - chr1_4:67607043-67607062 None:intergenic 55.0%
CGATTCTTGGCAGTGGCTCT+TGG - chr1_4:67607326-67607345 None:intergenic 55.0%
! GAAGTGGTGTCGGAGGTTGT+GGG - chr1_4:67607419-67607438 None:intergenic 55.0%
TGTTGGGGTGAGAGGCAGAT+GGG - chr1_4:67607450-67607469 None:intergenic 55.0%
TTGTTGGGGTGAGAGGCAGA+TGG - chr1_4:67607451-67607470 None:intergenic 55.0%
GCGTTTCGAGACACTCGCTA+AGG + chr1_4:67607727-67607746 Msa0179900:intron 55.0%
CCCACCAATATTGCGAGTCC+AGG + chr1_4:67607829-67607848 Msa0179900:intron 55.0%
CGGACCTGGACTCGCAATAT+TGG - chr1_4:67607836-67607855 None:intergenic 55.0%
AGGAGCAGACCTGAACTCAG+GGG - chr1_4:67607872-67607891 None:intergenic 55.0%
CAGGAGCAGACCTGAACTCA+GGG - chr1_4:67607873-67607892 None:intergenic 55.0%
CTGAGTTCAGGTCTGCTCCT+GGG + chr1_4:67607872-67607891 Msa0179900:intron 55.0%
GCGAAGACCCCAAAAAGCAG+TGG + chr1_4:67608579-67608598 Msa0179900:intron 55.0%
!! GCATGGGACCCACTGCTTTT+TGG - chr1_4:67608591-67608610 None:intergenic 55.0%
CCTACACGACGACGTACGAT+TGG - chr1_4:67608758-67608777 None:intergenic 55.0%
CCAATCGTACGTCGTCGTGT+AGG + chr1_4:67608755-67608774 Msa0179900:intron 55.0%
GTAGTGATGTGAGGAAGGGG+AGG + chr1_4:67608843-67608862 Msa0179900:intron 55.0%
GTGAGGAAGGGGAGGAAGAA+AGG + chr1_4:67608851-67608870 Msa0179900:intron 55.0%
TAGCCAAGTCGAGCCCAAGA+CGG - chr1_4:67609206-67609225 None:intergenic 55.0%
CTCAACACTTGGTTGCCAGC+AGG + chr1_4:67610440-67610459 Msa0179900:CDS 55.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr1_4:67602305-67602324 Msa0179900:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr1_4:67602584-67602603 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG - chr1_4:67602585-67602604 None:intergenic 60.0%
CCAATCCAAGCCCGCACTAG+CGG + chr1_4:67607029-67607048 Msa0179900:intron 60.0%
! CGGTTGTGTGTAGCGGGATG+CGG - chr1_4:67607113-67607132 None:intergenic 60.0%
AACGGCGCGGTTGTGTGTAG+CGG - chr1_4:67607120-67607139 None:intergenic 60.0%
ACACACAACCGCGCCGTTGT+AGG + chr1_4:67607122-67607141 Msa0179900:intron 60.0%
GTGTCGGAGGTTGTGGGTGT+GGG - chr1_4:67607413-67607432 None:intergenic 60.0%
! GGAAGTGGTGTCGGAGGTTG+TGG - chr1_4:67607420-67607439 None:intergenic 60.0%
GTTGGGGTGAGAGGCAGATG+GGG - chr1_4:67607449-67607468 None:intergenic 60.0%
TCAGGGGAAGAAGTCAGGGG+CGG - chr1_4:67607856-67607875 None:intergenic 60.0%
CCAGGAGCAGACCTGAACTC+AGG - chr1_4:67607874-67607893 None:intergenic 60.0%
CCTGAGTTCAGGTCTGCTCC+TGG + chr1_4:67607871-67607890 Msa0179900:intron 60.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - chr1_4:67602571-67602590 None:intergenic 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG - chr1_4:67602572-67602591 None:intergenic 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - chr1_4:67602573-67602592 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr1_4:67602580-67602599 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr1_4:67602581-67602600 None:intergenic 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG - chr1_4:67602586-67602605 None:intergenic 65.0%
GGGACTCAGTCCTGGTGGTC+AGG - chr1_4:67606765-67606784 None:intergenic 65.0%
CCGCTAGTGCGGGCTTGGAT+TGG - chr1_4:67607032-67607051 None:intergenic 65.0%
TATGGCCGCTAGTGCGGGCT+TGG - chr1_4:67607037-67607056 None:intergenic 65.0%
AGCGGGATGCGGTCATGTCG+AGG - chr1_4:67607102-67607121 None:intergenic 65.0%
ACGGCGCGGTTGTGTGTAGC+GGG - chr1_4:67607119-67607138 None:intergenic 65.0%
TCGGAGGTTGTGGGTGTGGG+AGG - chr1_4:67607410-67607429 None:intergenic 65.0%
! GGTGTCGGAGGTTGTGGGTG+TGG - chr1_4:67607414-67607433 None:intergenic 65.0%
! AGGCGTGGAAGTGGTGTCGG+AGG - chr1_4:67607426-67607445 None:intergenic 65.0%
! GGGAGGCGTGGAAGTGGTGT+CGG - chr1_4:67607429-67607448 None:intergenic 65.0%
! CAGATGGGGAGGCGTGGAAG+TGG - chr1_4:67607435-67607454 None:intergenic 65.0%
GAAGAAGTCAGGGGCGGACC+TGG - chr1_4:67607850-67607869 None:intergenic 65.0%
CTGCCGTCTTGGGCTCGACT+TGG + chr1_4:67609200-67609219 Msa0179900:intron 65.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - chr1_4:67602570-67602589 None:intergenic 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG - chr1_4:67602574-67602593 None:intergenic 70.0%
GAGAGGCAGATGGGGAGGCG+TGG - chr1_4:67607441-67607460 None:intergenic 70.0%
GGGGTGAGAGGCAGATGGGG+AGG - chr1_4:67607446-67607465 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 67600259 67610640 67600259 ID=Msa0179900;Name=Msa0179900
chr1_4 mRNA 67600259 67610640 67600259 ID=Msa0179900-mRNA-1;Parent=Msa0179900;Name=Msa0179900-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|0|0.16|6|0|584
chr1_4 exon 67600259 67600370 67600259 ID=Msa0179900-mRNA-1:exon:22271;Parent=Msa0179900-mRNA-1
chr1_4 exon 67604124 67604362 67604124 ID=Msa0179900-mRNA-1:exon:22272;Parent=Msa0179900-mRNA-1
chr1_4 exon 67604411 67604635 67604411 ID=Msa0179900-mRNA-1:exon:22273;Parent=Msa0179900-mRNA-1
chr1_4 exon 67604642 67604882 67604642 ID=Msa0179900-mRNA-1:exon:22274;Parent=Msa0179900-mRNA-1
chr1_4 exon 67609692 67609829 67609692 ID=Msa0179900-mRNA-1:exon:22275;Parent=Msa0179900-mRNA-1
chr1_4 exon 67609841 67610640 67609841 ID=Msa0179900-mRNA-1:exon:22276;Parent=Msa0179900-mRNA-1
chr1_4 CDS 67600259 67600370 67600259 ID=Msa0179900-mRNA-1:cds;Parent=Msa0179900-mRNA-1
chr1_4 CDS 67604124 67604362 67604124 ID=Msa0179900-mRNA-1:cds;Parent=Msa0179900-mRNA-1
chr1_4 CDS 67604411 67604635 67604411 ID=Msa0179900-mRNA-1:cds;Parent=Msa0179900-mRNA-1
chr1_4 CDS 67604642 67604882 67604642 ID=Msa0179900-mRNA-1:cds;Parent=Msa0179900-mRNA-1
chr1_4 CDS 67609692 67609829 67609692 ID=Msa0179900-mRNA-1:cds;Parent=Msa0179900-mRNA-1
chr1_4 CDS 67609841 67610640 67609841 ID=Msa0179900-mRNA-1:cds;Parent=Msa0179900-mRNA-1
Gene Sequence

>Msa0179900

ATGGCGTTGTTTAAAGGGCATCCAGATTTAATTGCGAGATTCAACACCTTTTTGCCACCAGGAGAAATCCCACTTCCATTGGATGATGATGATGATAAAGAACAAAATGGTGAAGCTGTGTTTCATGATAAGAGGCAAAAGTATGAAGAATTCGTGAAACTCCTACAAGATTTCGGCGCCAAAAGAATTGATAGAAGAGTCGTCAAAGAAGGAGTTATGGAGTTGTTTAAAGATCATCAAGATTTACTTCCAAGATTCAACATCTTCTTGCCACCAGGACATGAAATCTCACTTCCATTTGATGATGATCTACAACAACATGATCGATCACCGCTCGAAGATGAAGCAATGTTCAATGAATTCTTGAAACTCCTAGCTGATTACCGTGCCAAAAGAATTGATGTAAGAGTTGTCAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAAATTTACTTCCGGGATTCAACACCTTCTTGCCAGAGGGACACAAAATCTCAATTCCATTGGCTGATGATTTACAACAACGTGATCGATTAGCACTCGAAGATGAAGCAACAGCGTTTTTAACAGCAGTTACATTTAAAGATAAGATGGAAATGTTCGAGGAATTCTTGAAACTCCTAGCTGATTACCATGCCAAAAGAATTGATGTAAGAGTTATGAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGATTCAACACCTTCTTGCCAGAGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGATGAAGACGGATCAGAGTTGAAAGATGCACAGAAAGCAATGACGTTTATAAAGGATGTAAAACTTGTGTTTCAAGATAAGAAGGAAAAGTTTAATGAATTCATGAAACTCCTACATGATTTCAGGGCCAAAAGAATTGATAGAATAGAAGAGTTGTCAAAGATGGAGTTATGGAAACATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCACCAGGACATGAAATCCCACTTCTATTCTTCTTGCCACCAGGACATGAATTCCCACTTCTATTCCCAAATTTGTTTGCAACAGCAGTTAAAGTTGCATTTCCAGATAAGATGGAAAAGTATGATGAATTCTTGAAACTCGTAGTTGATTGCAATGCCAAAAGAATTGATATGAGAGTTTTCAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAGATTTACTTTTGGGACTCAACACTTGGTTGCCAGTGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGGAGATGGATTAGAGTTGAAAGATGCACAGAATGATGATGAACAACAAGGTGATGGATCGGCGCTCAAAGATGAATCAGCACTCGCAGATGCAACAAAGTCGTTTGCAACAGCAGTTAAAGTTGCATTTCAAGATAAGATGGATAAGTATGATGAATTCTTAAAACTCATAATTGATTGTCGTACCAAAAGAATTGATTTTAGAGTTTTCAAAGAAGGAATGGTGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGACTCAACACTTGGTTGCCAGCAGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGATGATGGATTAGAGTTGAAAGATGCACAGAAAGATGCTGAACAACAAGGTGATGGATTAGAGTACAAAGATGAACTTCAAGTTGATGAAGTGGCACTCAAACTCAAAAATGAGCAGAAAGATGACGAACAATAA
Protein sequence

>Msa0179900

MALFKGHPDLIARFNTFLPPGEIPLPLDDDDDKEQNGEAVFHDKRQKYEEFVKLLQDFGAKRIDRRVVKEGVMELFKDHQDLLPRFNIFLPPGHEISLPFDDDLQQHDRSPLEDEAMFNEFLKLLADYRAKRIDVRVVKEGMMELFKDHKNLLPGFNTFLPEGHKISIPLADDLQQRDRLALEDEATAFLTAVTFKDKMEMFEEFLKLLADYHAKRIDVRVMKEGMMELFKDHKNLLLGFNTFLPEGHKISLPLDGDEQQDEDGSELKDAQKAMTFIKDVKLVFQDKKEKFNEFMKLLHDFRAKRIDRIEELSKMELWKHQDLISRFNIFLPPGHEIPLLFFLPPGHEFPLLFPNLFATAVKVAFPDKMEKYDEFLKLVVDCNAKRIDMRVFKEGMMELFKDHKDLLLGLNTWLPVGHKISLPLDGDEQQGGDGLELKDAQNDDEQQGDGSALKDESALADATKSFATAVKVAFQDKMDKYDEFLKLIIDCRTKRIDFRVFKEGMVELFKDHKNLLLGLNTWLPAGHKISLPLDGDEQQGDDGLELKDAQKDAEQQGDGLEYKDELQVDEVALKLKNEQKDDEQ*