AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0181170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181170 MtrunA17_Chr1g0203441 96.691 272 7 1 1 270 1 272 0.0 550
Msa0181170 MtrunA17_Chr6g0470971 60.544 294 81 5 1 270 1 283 1.44e-118 340
Msa0181170 MtrunA17_Chr1g0193371 71.074 121 34 1 10 129 9 129 6.14e-56 184
Msa0181170 MtrunA17_Chr1g0211161 69.748 119 35 1 10 127 10 128 3.22e-54 175
Msa0181170 MtrunA17_Chr3g0117091 69.421 121 36 1 10 129 9 129 4.69e-54 178
Msa0181170 MtrunA17_Chr7g0270891 57.516 153 64 1 10 161 9 161 5.28e-54 179
Msa0181170 MtrunA17_Chr4g0058631 60.993 141 51 2 10 146 9 149 7.94e-54 178
Msa0181170 MtrunA17_Chr1g0193801 69.748 119 35 1 10 127 9 127 2.60e-53 177
Msa0181170 MtrunA17_Chr7g0271241 64.493 138 43 2 10 146 9 141 1.14e-52 176
Msa0181170 MtrunA17_Chr4g0032401 56.291 151 49 1 9 159 13 146 1.17e-52 174
Msa0181170 MtrunA17_Chr8g0387421 66.667 108 36 0 12 119 11 118 9.30e-52 171
Msa0181170 MtrunA17_Chr2g0330041 70.370 108 32 0 10 117 9 116 2.28e-51 172
Msa0181170 MtrunA17_Chr2g0309911 50.888 169 78 3 9 172 7 175 2.66e-51 170
Msa0181170 MtrunA17_Chr2g0328771 71.154 104 30 0 14 117 21 124 2.73e-51 170
Msa0181170 MtrunA17_Chr8g0342541 69.444 108 33 0 10 117 9 116 5.11e-51 170
Msa0181170 MtrunA17_Chr8g0342521 59.701 134 54 0 10 143 9 142 1.62e-50 169
Msa0181170 MtrunA17_Chr3g0088461 70.370 108 32 0 10 117 19 126 8.44e-50 167
Msa0181170 MtrunA17_Chr1g0203411 64.815 108 38 0 14 121 13 120 1.92e-49 165
Msa0181170 MtrunA17_Chr6g0453471 62.308 130 47 2 14 141 13 142 2.69e-49 166
Msa0181170 MtrunA17_Chr3g0131121 48.428 159 77 3 1 155 1 158 5.48e-49 164
Msa0181170 MtrunA17_Chr5g0397231 68.317 101 32 0 12 112 11 111 6.69e-49 164
Msa0181170 MtrunA17_Chr7g0217741 63.866 119 42 1 1 119 1 118 3.46e-48 162
Msa0181170 MtrunA17_Chr7g0274581 61.017 118 46 0 14 131 13 130 4.04e-48 159
Msa0181170 MtrunA17_Chr2g0281071 60.504 119 47 0 1 119 1 119 8.26e-48 162
Msa0181170 MtrunA17_Chr3g0115821 66.038 106 36 0 14 119 13 118 1.02e-47 162
Msa0181170 MtrunA17_Chr8g0385321 59.829 117 46 1 15 130 14 130 1.13e-47 160
Msa0181170 MtrunA17_Chr4g0042671 60.317 126 49 1 14 138 13 138 3.56e-47 162
Msa0181170 MtrunA17_Chr4g0037141 37.308 260 144 7 1 246 1 255 3.76e-47 159
Msa0181170 MtrunA17_Chr4g0039971 52.778 144 61 2 14 156 14 151 4.24e-47 160
Msa0181170 MtrunA17_Chr4g0048511 59.664 119 48 0 1 119 1 119 1.10e-46 159
Msa0181170 MtrunA17_Chr8g0342481 61.983 121 45 1 10 129 9 129 1.39e-46 160
Msa0181170 MtrunA17_Chr5g0410961 60.870 115 44 1 14 127 13 127 3.36e-46 157
Msa0181170 MtrunA17_Chr1g0167691 39.189 222 117 5 14 219 13 232 5.73e-46 154
Msa0181170 MtrunA17_Chr1g0187761 65.385 104 36 0 14 117 13 116 1.04e-45 154
Msa0181170 MtrunA17_Chr5g0435101 54.331 127 52 2 15 136 13 138 1.66e-45 152
Msa0181170 MtrunA17_Chr5g0395281 63.208 106 39 0 14 119 13 118 2.32e-45 154
Msa0181170 MtrunA17_Chr5g0434571 52.482 141 65 2 1 140 37 176 1.38e-44 154
Msa0181170 MtrunA17_Chr2g0323411 59.167 120 48 1 1 120 1 119 4.88e-44 152
Msa0181170 MtrunA17_Chr2g0323351 61.321 106 41 0 14 119 13 118 5.62e-44 149
Msa0181170 MtrunA17_Chr4g0044421 56.897 116 50 0 4 119 3 118 7.53e-44 147
Msa0181170 MtrunA17_Chr3g0110351 54.887 133 58 2 1 132 1 132 1.20e-43 150
Msa0181170 MtrunA17_Chr7g0228891 50.000 150 69 3 1 145 1 149 1.32e-43 149
Msa0181170 MtrunA17_Chr4g0022931 57.265 117 50 0 1 117 1 117 2.59e-43 148
Msa0181170 MtrunA17_Chr4g0068061 46.552 174 90 2 1 172 1 173 2.74e-43 150
Msa0181170 MtrunA17_Chr4g0022891 64.356 101 36 0 14 114 13 113 3.78e-43 147
Msa0181170 MtrunA17_Chr1g0167661 58.407 113 47 0 14 126 13 125 4.17e-43 147
Msa0181170 MtrunA17_Chr7g0217221 58.879 107 44 0 14 120 13 119 2.65e-42 145
Msa0181170 MtrunA17_Chr3g0103281 50.365 137 67 1 14 149 13 149 2.76e-42 147
Msa0181170 MtrunA17_Chr8g0349261 52.713 129 59 2 1 127 1 129 4.97e-42 145
Msa0181170 MtrunA17_Chr7g0261281 57.265 117 49 1 1 117 1 116 5.94e-42 145
Msa0181170 MtrunA17_Chr7g0228231 43.558 163 85 2 11 168 12 172 6.36e-42 142
Msa0181170 MtrunA17_Chr4g0057031 56.303 119 51 1 1 119 1 118 6.45e-42 144
Msa0181170 MtrunA17_Chr4g0022901 55.556 117 52 0 1 117 1 117 7.18e-42 144
Msa0181170 MtrunA17_Chr6g0452271 53.488 129 56 3 1 127 1 127 1.06e-41 145
Msa0181170 MtrunA17_Chr4g0022911 60.577 104 41 0 14 117 14 117 1.13e-41 144
Msa0181170 MtrunA17_Chr1g0151941 44.231 156 78 4 1 155 1 148 2.60e-41 142
Msa0181170 MtrunA17_Chr2g0311221 62.136 103 39 0 10 112 11 113 4.47e-41 144
Msa0181170 MtrunA17_Chr1g0186061 57.391 115 47 1 2 116 11 123 7.68e-41 141
Msa0181170 MtrunA17_Chr1g0168661 61.538 104 40 0 14 117 22 125 9.15e-41 141
Msa0181170 MtrunA17_Chr7g0264641 49.664 149 69 4 1 145 1 147 1.59e-40 141
Msa0181170 MtrunA17_Chr3g0121241 53.846 117 53 1 14 129 43 159 2.01e-40 142
Msa0181170 MtrunA17_Chr4g0022881 61.765 102 39 0 14 115 13 114 2.04e-40 139
Msa0181170 MtrunA17_Chr3g0092401 53.782 119 55 0 1 119 1 119 3.05e-40 141
Msa0181170 MtrunA17_Chr1g0152011 37.004 227 133 6 1 225 1 219 3.91e-40 142
Msa0181170 MtrunA17_Chr4g0070611 55.556 117 51 1 1 117 1 116 5.15e-40 140
Msa0181170 MtrunA17_Chr1g0194951 57.265 117 49 1 1 117 1 116 5.16e-40 142
Msa0181170 MtrunA17_Chr4g0070641 51.111 135 53 2 15 149 14 135 5.21e-40 136
Msa0181170 MtrunA17_Chr1g0209661 56.250 112 48 1 14 125 28 138 7.30e-40 140
Msa0181170 MtrunA17_Chr7g0254411 43.976 166 86 1 14 172 13 178 8.36e-40 141
Msa0181170 MtrunA17_Chr6g0450101 54.545 110 50 0 11 120 12 121 1.41e-39 137
Msa0181170 MtrunA17_Chr4g0060721 57.547 106 45 0 14 119 14 119 1.84e-39 140
Msa0181170 MtrunA17_Chr8g0346561 53.782 119 54 1 1 119 1 118 1.87e-39 139
Msa0181170 MtrunA17_Chr8g0343831 59.048 105 43 0 15 119 10 114 1.88e-39 137
Msa0181170 MtrunA17_Chr1g0194291 55.556 117 52 0 14 130 22 138 2.01e-39 138
Msa0181170 MtrunA17_Chr4g0028311 55.906 127 51 4 1 125 1 124 2.26e-39 139
Msa0181170 MtrunA17_Chr2g0327351 53.285 137 62 2 1 136 1 136 2.99e-39 139
Msa0181170 MtrunA17_Chr5g0400821 43.750 160 72 3 1 143 1 159 3.48e-39 138
Msa0181170 MtrunA17_Chr6g0453211 59.596 99 40 0 14 112 13 111 5.45e-39 138
Msa0181170 MtrunA17_Chr5g0417821 54.783 115 51 1 14 127 8 122 6.79e-39 137
Msa0181170 MtrunA17_Chr7g0275911 50.806 124 60 1 1 124 1 123 7.28e-39 136
Msa0181170 MtrunA17_Chr4g0055981 47.101 138 73 0 9 146 51 188 1.35e-38 135
Msa0181170 MtrunA17_Chr3g0135311 54.237 118 52 2 1 117 1 117 3.68e-38 137
Msa0181170 MtrunA17_Chr1g0194301 53.043 115 53 1 14 128 34 147 4.60e-38 135
Msa0181170 MtrunA17_Chr7g0240821 41.935 155 86 1 18 168 6 160 4.73e-38 133
Msa0181170 MtrunA17_Chr1g0180391 57.692 104 44 0 14 117 20 123 2.75e-37 131
Msa0181170 MtrunA17_Chr8g0354661 39.512 205 103 5 14 210 38 229 9.33e-37 136
Msa0181170 MtrunA17_Chr5g0434831 55.357 112 49 1 6 117 1 111 1.72e-36 128
Msa0181170 MtrunA17_Chr4g0054391 55.856 111 47 2 1 110 1 110 4.83e-36 130
Msa0181170 MtrunA17_Chr3g0099131 52.679 112 53 0 14 125 42 153 6.89e-36 134
Msa0181170 MtrunA17_Chr4g0068921 53.390 118 53 2 14 130 25 141 8.19e-36 126
Msa0181170 MtrunA17_Chr6g0487491 44.231 156 76 4 1 146 1 155 1.15e-35 128
Msa0181170 MtrunA17_Chr5g0434911 52.632 114 53 1 6 118 13 126 1.44e-35 128
Msa0181170 MtrunA17_Chr5g0434931 54.286 105 48 0 14 118 36 140 1.52e-35 128
Msa0181170 MtrunA17_Chr3g0080861 51.818 110 53 0 14 123 38 147 2.26e-35 132
Msa0181170 MtrunA17_Chr7g0220341 51.261 119 56 1 14 130 26 144 4.69e-35 127
Msa0181170 MtrunA17_Chr2g0293911 52.101 119 57 0 14 132 25 143 6.93e-35 127
Msa0181170 MtrunA17_Chr8g0342511 72.152 79 22 0 10 88 9 87 8.69e-35 120
Msa0181170 MtrunA17_Chr5g0434841 55.769 104 46 0 14 117 21 124 9.46e-35 127
Msa0181170 MtrunA17_Chr2g0327821 52.885 104 49 0 14 117 7 110 1.17e-34 125
Msa0181170 MtrunA17_Chr7g0269831 56.410 117 50 1 1 117 1 116 1.22e-34 127
Msa0181170 MtrunA17_Chr8g0342531 67.901 81 26 0 10 90 9 89 2.11e-34 122
Msa0181170 MtrunA17_Chr4g0072751 52.679 112 51 2 1 111 1 111 2.26e-34 127
Msa0181170 MtrunA17_Chr7g0228991 55.238 105 47 0 14 118 30 134 3.38e-34 124
Msa0181170 MtrunA17_Chr8g0360111 56.000 100 44 0 14 113 26 125 5.53e-34 124
Msa0181170 MtrunA17_Chr1g0154031 54.369 103 47 0 14 116 77 179 1.06e-33 126
Msa0181170 MtrunA17_Chr2g0322521 53.636 110 51 0 14 123 30 139 1.68e-33 125
Msa0181170 MtrunA17_Chr4g0030881 49.558 113 50 1 14 119 8 120 2.20e-33 122
Msa0181170 MtrunA17_Chr8g0334881 52.294 109 50 2 14 121 11 118 2.31e-32 120
Msa0181170 MtrunA17_Chr1g0192411 49.107 112 57 0 12 123 11 122 6.86e-32 121
Msa0181170 MtrunA17_Chr4g0042611 62.500 80 30 0 10 89 9 88 1.52e-31 112
Msa0181170 MtrunA17_Chr5g0441131 42.069 145 78 3 14 157 10 149 1.69e-31 115
Msa0181170 MtrunA17_Chr8g0342461 63.855 83 29 1 9 90 8 90 4.33e-31 112
Msa0181170 MtrunA17_Chr8g0342471 63.855 83 29 1 9 90 8 90 1.25e-30 111
Msa0181170 MtrunA17_Chr7g0247131 63.014 73 27 0 45 117 10 82 3.44e-30 114
Msa0181170 MtrunA17_Chr4g0013361 52.427 103 48 1 14 115 11 113 5.04e-30 114
Msa0181170 MtrunA17_Chr5g0440781 48.544 103 52 1 14 115 13 115 3.41e-29 109
Msa0181170 MtrunA17_Chr6g0454921 40.260 154 90 2 15 167 15 167 6.52e-29 109
Msa0181170 MtrunA17_Chr5g0440761 48.544 103 52 1 14 115 13 115 1.00e-28 110
Msa0181170 MtrunA17_Chr5g0401731 48.598 107 54 1 15 121 15 120 1.26e-28 111
Msa0181170 MtrunA17_Chr5g0441141 48.544 103 52 1 14 115 13 115 1.26e-28 110
Msa0181170 MtrunA17_Chr4g0008551 46.018 113 60 1 15 127 38 149 1.27e-27 108
Msa0181170 MtrunA17_Chr5g0395221 63.158 76 28 0 14 89 13 88 1.31e-27 102
Msa0181170 MtrunA17_Chr3g0133601 50.000 106 48 2 15 118 37 139 2.61e-27 105
Msa0181170 MtrunA17_Chr6g0460661 48.624 109 51 3 9 116 12 116 5.77e-27 102
Msa0181170 MtrunA17_Chr6g0480581 46.078 102 52 2 15 115 4 103 1.95e-26 103
Msa0181170 MtrunA17_Chr3g0125801 34.973 183 108 4 15 189 16 195 2.32e-26 104
Msa0181170 MtrunA17_Chr4g0053431 47.115 104 54 1 15 118 5 107 6.94e-26 102
Msa0181170 MtrunA17_Chr2g0323321 56.250 80 35 0 14 93 12 91 1.56e-25 97.4
Msa0181170 MtrunA17_Chr3g0099141 53.086 81 38 0 14 94 41 121 1.00e-24 96.3
Msa0181170 MtrunA17_Chr4g0042501 44.118 102 56 1 15 116 105 205 2.05e-24 101
Msa0181170 MtrunA17_Chr2g0294811 51.613 93 44 1 1 93 1 92 3.93e-24 94.0
Msa0181170 MtrunA17_Chr5g0417621 36.301 146 78 3 12 143 131 275 4.57e-24 100
Msa0181170 MtrunA17_Chr7g0238631 44.860 107 58 1 11 117 109 214 1.09e-23 100
Msa0181170 MtrunA17_Chr7g0238631 32.231 121 71 3 9 119 46 165 1.17e-11 64.7
Msa0181170 MtrunA17_Chr7g0229101 58.571 70 29 0 45 114 4 73 1.14e-23 95.5
Msa0181170 MtrunA17_Chr7g0229131 48.810 84 43 0 45 128 4 87 1.60e-23 94.0
Msa0181170 MtrunA17_Chr5g0434901 58.824 68 28 0 47 114 7 74 4.58e-23 91.3
Msa0181170 MtrunA17_Chr6g0460671 40.351 114 67 1 15 128 99 211 1.20e-22 95.5
Msa0181170 MtrunA17_Chr5g0429661 35.246 122 78 1 15 136 122 242 3.98e-22 94.0
Msa0181170 MtrunA17_Chr7g0254261 46.602 103 52 2 15 116 89 189 4.32e-22 94.0
Msa0181170 MtrunA17_Chr3g0139671 37.500 120 74 1 11 130 81 199 9.83e-22 94.7
Msa0181170 MtrunA17_Chr3g0139671 38.596 114 66 3 9 119 25 137 2.12e-16 79.0
Msa0181170 MtrunA17_Chr4g0058991 40.000 105 62 1 15 119 209 312 1.04e-21 94.0
Msa0181170 MtrunA17_Chr3g0093811 47.674 86 44 1 45 129 14 99 1.37e-21 91.3
Msa0181170 MtrunA17_Chr1g0157731 37.705 122 75 1 11 132 87 207 3.13e-21 93.2
Msa0181170 MtrunA17_Chr1g0157731 35.965 114 69 3 9 119 31 143 3.89e-15 75.1
Msa0181170 MtrunA17_Chr3g0117511 39.286 112 67 1 8 119 176 286 6.98e-21 91.7
Msa0181170 MtrunA17_Chr5g0425591 46.429 84 44 1 14 96 10 93 1.53e-20 84.0
Msa0181170 MtrunA17_Chr5g0437321 44.444 99 54 1 15 113 19 116 2.24e-20 88.2
Msa0181170 MtrunA17_Chr7g0228531 32.680 153 80 4 15 151 220 365 3.43e-19 86.7
Msa0181170 MtrunA17_Chr7g0238651 38.000 100 60 1 18 115 10 109 6.10e-19 85.1
Msa0181170 MtrunA17_Chr6g0453751 47.778 90 38 2 14 94 21 110 1.39e-18 79.7
Msa0181170 MtrunA17_Chr5g0397841 43.011 93 52 1 18 110 113 204 2.11e-18 84.3
Msa0181170 MtrunA17_Chr8g0362231 32.000 125 84 1 18 142 25 148 4.85e-17 80.5
Msa0181170 MtrunA17_Chr1g0177901 46.154 78 41 1 34 111 13 89 9.09e-17 77.0
Msa0181170 MtrunA17_Chr7g0228401 35.537 121 53 4 15 111 255 374 2.05e-16 78.6
Msa0181170 MtrunA17_Chr5g0416341 34.109 129 82 3 7 134 17 143 2.55e-16 78.2
Msa0181170 MtrunA17_Chr7g0228481 36.792 106 63 3 15 120 220 321 2.28e-14 72.4
Msa0181170 MtrunA17_Chr7g0233061 35.052 97 60 3 15 111 180 273 1.16e-13 70.1
Msa0181170 MtrunA17_Chr1g0193901 48.864 88 43 2 9 94 7 94 1.08e-12 63.2
Msa0181170 MtrunA17_Chr1g0193891 48.864 88 43 2 9 94 7 94 1.08e-12 63.2
Msa0181170 MtrunA17_Chr1g0193871 48.864 88 43 2 9 94 7 94 1.08e-12 63.2
Msa0181170 MtrunA17_Chr1g0193881 48.864 88 43 2 9 94 7 94 1.08e-12 63.2
Msa0181170 MtrunA17_Chr5g0434871 58.140 43 18 0 75 117 2 44 2.87e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181170 AT4G25560.1 52.153 209 79 3 6 193 1 209 1.49e-62 198
Msa0181170 AT5G52260.1 57.447 188 64 4 7 178 6 193 4.40e-62 197
Msa0181170 AT3G48920.1 53.886 193 80 4 8 196 13 200 7.14e-62 196
Msa0181170 AT5G26660.1 70.588 119 34 1 10 127 9 127 1.13e-54 180
Msa0181170 AT1G57560.1 50.262 191 78 4 10 195 9 187 1.71e-54 179
Msa0181170 AT1G57560.2 59.060 149 56 2 10 157 9 153 6.93e-54 176
Msa0181170 AT4G01680.3 64.341 129 45 1 10 137 9 137 7.17e-54 175
Msa0181170 AT4G01680.1 64.341 129 45 1 10 137 9 137 5.41e-53 176
Msa0181170 AT1G09540.1 64.341 129 45 1 10 137 9 137 2.66e-52 174
Msa0181170 AT1G63910.1 67.593 108 35 0 12 119 11 118 9.79e-52 173
Msa0181170 AT3G13890.2 70.370 108 32 0 10 117 9 116 1.55e-51 172
Msa0181170 AT5G12870.1 69.444 108 33 0 12 119 17 124 2.35e-50 167
Msa0181170 AT3G12720.1 62.069 116 43 1 12 126 21 136 4.99e-50 167
Msa0181170 AT3G08500.1 70.370 108 32 0 10 117 27 134 5.58e-50 168
Msa0181170 AT3G01140.2 56.291 151 63 3 1 149 1 150 6.52e-50 167
Msa0181170 AT4G01680.2 58.865 141 45 2 10 137 9 149 1.51e-49 167
Msa0181170 AT3G01140.1 58.696 138 55 2 14 149 56 193 1.75e-49 168
Msa0181170 AT5G65230.1 69.811 106 32 0 14 119 13 118 1.99e-49 166
Msa0181170 AT5G15310.1 68.868 106 33 0 14 119 13 118 1.48e-48 164
Msa0181170 AT4G05100.1 61.345 119 46 0 1 119 1 119 1.51e-48 164
Msa0181170 AT4G34990.1 51.948 154 66 3 1 153 1 147 1.60e-48 162
Msa0181170 AT5G15310.4 68.868 106 33 0 14 119 13 118 1.61e-48 161
Msa0181170 AT5G15310.2 68.868 106 33 0 14 119 13 118 1.83e-48 163
Msa0181170 AT3G13890.1 64.957 117 32 1 10 117 9 125 2.25e-48 164
Msa0181170 AT4G38620.1 53.957 139 62 2 1 138 1 138 4.11e-48 161
Msa0181170 AT3G02940.2 64.151 106 38 0 14 119 13 118 6.61e-48 161
Msa0181170 AT3G02940.1 64.151 106 38 0 14 119 13 118 1.28e-47 161
Msa0181170 AT3G02940.3 64.151 106 38 0 14 119 13 118 1.28e-47 161
Msa0181170 AT5G10280.1 59.664 119 47 1 1 119 1 118 3.04e-47 160
Msa0181170 AT1G79180.1 65.766 111 38 0 10 120 11 121 3.35e-47 159
Msa0181170 AT1G18570.1 52.206 136 64 1 5 139 5 140 3.36e-47 161
Msa0181170 AT5G54230.1 66.038 106 36 0 14 119 13 118 3.95e-47 160
Msa0181170 AT1G22640.1 52.857 140 64 2 1 139 1 139 4.22e-47 158
Msa0181170 AT4G09460.1 52.555 137 63 2 1 136 1 136 1.27e-46 156
Msa0181170 AT1G34670.1 52.288 153 61 3 14 165 13 154 1.99e-46 159
Msa0181170 AT1G74430.1 65.094 106 37 0 14 119 13 118 7.69e-46 155
Msa0181170 AT4G21440.1 63.208 106 39 0 14 119 13 118 7.80e-46 157
Msa0181170 AT2G16720.1 54.015 137 61 2 1 136 1 136 8.93e-46 155
Msa0181170 AT5G16770.4 63.462 104 38 0 14 117 13 116 2.00e-45 155
Msa0181170 AT5G16770.3 63.462 104 38 0 14 117 13 116 2.00e-45 155
Msa0181170 AT3G23250.1 61.538 104 40 0 14 117 13 116 2.05e-45 154
Msa0181170 AT2G31180.1 59.504 121 48 1 1 121 1 120 2.19e-45 153
Msa0181170 AT5G16770.1 63.462 104 38 0 14 117 13 116 3.02e-45 155
Msa0181170 AT5G16770.2 63.462 104 38 0 14 117 13 116 3.02e-45 155
Msa0181170 AT5G16600.1 46.243 173 91 2 1 172 1 172 3.08e-45 155
Msa0181170 AT3G12820.1 63.636 110 40 0 10 119 11 120 3.30e-45 152
Msa0181170 AT1G06180.1 54.074 135 61 1 1 135 1 134 3.48e-45 152
Msa0181170 AT4G17785.2 59.829 117 47 0 1 117 1 117 6.38e-45 155
Msa0181170 AT4G17785.1 59.829 117 47 0 1 117 1 117 7.93e-45 155
Msa0181170 AT5G60890.1 59.130 115 46 1 14 127 13 127 1.32e-44 152
Msa0181170 AT4G22680.1 48.734 158 79 2 1 157 1 157 1.34e-44 152
Msa0181170 AT4G12350.1 49.664 149 71 3 1 147 1 147 1.44e-44 152
Msa0181170 AT4G28110.1 60.748 107 42 0 14 120 13 119 1.63e-44 152
Msa0181170 AT5G07690.1 57.851 121 50 1 14 133 13 133 1.69e-44 153
Msa0181170 AT5G61420.2 57.031 128 52 2 14 140 13 138 2.23e-44 154
Msa0181170 AT5G07700.1 49.367 158 74 4 14 169 13 166 7.13e-44 152
Msa0181170 AT5G07700.2 49.367 158 74 4 14 169 13 166 7.13e-44 152
Msa0181170 AT1G16490.1 63.303 109 40 0 10 118 11 119 7.24e-44 150
Msa0181170 AT3G30210.1 48.066 181 72 3 14 194 28 186 4.85e-43 148
Msa0181170 AT5G35550.1 62.264 106 40 0 15 120 16 121 7.06e-43 147
Msa0181170 AT1G66230.1 51.449 138 65 2 1 137 1 137 7.47e-43 147
Msa0181170 AT1G56160.1 63.303 109 40 0 10 118 11 119 8.39e-43 148
Msa0181170 AT1G74080.1 48.299 147 74 2 14 158 13 159 1.35e-42 148
Msa0181170 AT1G35515.1 50.365 137 66 2 1 136 1 136 3.98e-42 144
Msa0181170 AT5G23000.1 58.824 119 45 3 1 117 1 117 4.65e-42 147
Msa0181170 AT5G56110.1 50.365 137 67 1 14 149 13 149 4.87e-42 147
Msa0181170 AT3G01530.1 50.758 132 64 1 14 144 26 157 7.21e-42 143
Msa0181170 AT5G14340.1 50.725 138 66 2 1 137 13 149 1.46e-41 144
Msa0181170 AT3G27920.1 52.679 112 53 0 7 118 8 119 2.03e-41 142
Msa0181170 AT5G40350.1 49.254 134 63 1 14 142 18 151 2.56e-41 142
Msa0181170 AT5G49330.1 58.120 117 48 1 1 117 1 116 3.05e-41 145
Msa0181170 AT3G61250.1 59.615 104 42 0 14 117 13 116 3.20e-41 144
Msa0181170 AT1G08810.1 53.125 128 60 0 14 141 13 140 3.31e-41 143
Msa0181170 AT5G62470.2 58.716 109 45 0 14 122 13 121 3.79e-41 145
Msa0181170 AT5G14750.1 54.206 107 49 0 12 118 15 121 6.32e-41 140
Msa0181170 AT1G18710.1 58.491 106 44 0 14 119 13 118 8.48e-41 142
Msa0181170 AT3G47600.1 59.434 106 43 0 14 119 13 118 8.61e-41 144
Msa0181170 AT3G13540.1 52.033 123 58 1 9 130 19 141 1.08e-40 141
Msa0181170 AT3G27810.1 47.857 140 72 1 14 152 21 160 1.52e-40 140
Msa0181170 AT1G79180.2 50.694 144 38 1 10 120 11 154 1.58e-40 143
Msa0181170 AT5G52600.1 54.545 110 50 0 7 116 6 115 2.07e-40 139
Msa0181170 AT2G47460.1 49.315 146 73 1 1 146 1 145 2.65e-40 143
Msa0181170 AT5G40330.1 53.271 107 50 0 12 118 11 117 3.78e-40 139
Msa0181170 AT3G24310.1 61.538 104 40 0 14 117 19 122 9.03e-40 139
Msa0181170 AT1G48000.1 57.627 118 48 2 14 130 33 149 1.21e-39 138
Msa0181170 AT3G28910.1 54.310 116 52 1 14 129 13 127 1.44e-39 140
Msa0181170 AT4G13480.1 61.538 104 40 0 14 117 7 110 1.47e-39 139
Msa0181170 AT1G74650.1 55.085 118 52 1 1 118 1 117 1.59e-39 140
Msa0181170 AT5G62470.1 58.716 109 44 1 14 122 13 120 2.44e-39 140
Msa0181170 AT3G62610.1 54.701 117 52 1 1 117 1 116 5.68e-39 139
Msa0181170 AT5G57620.1 55.932 118 50 2 1 117 1 117 1.13e-38 138
Msa0181170 AT1G68320.1 55.752 113 49 1 14 126 20 131 1.74e-38 136
Msa0181170 AT5G62320.1 48.800 125 56 2 14 130 14 138 2.70e-38 135
Msa0181170 AT2G36890.1 49.254 134 66 2 1 133 1 133 3.01e-38 136
Msa0181170 AT2G36890.2 51.240 121 58 1 14 133 54 174 5.14e-38 136
Msa0181170 AT3G49690.1 52.800 125 57 2 1 124 1 124 7.47e-38 135
Msa0181170 AT5G65790.1 51.128 133 59 3 1 132 1 128 1.26e-37 136
Msa0181170 AT3G28470.1 59.184 98 40 0 14 111 13 110 2.91e-37 134
Msa0181170 AT4G37780.1 52.137 117 55 1 14 129 13 129 8.27e-37 132
Msa0181170 AT3G11440.2 56.311 103 45 0 14 116 42 144 9.39e-37 135
Msa0181170 AT2G32460.1 51.754 114 55 0 14 127 19 132 1.19e-36 136
Msa0181170 AT2G32460.2 51.754 114 55 0 14 127 7 120 1.25e-36 135
Msa0181170 AT2G47190.1 50.442 113 56 0 5 117 12 124 2.39e-36 130
Msa0181170 AT3G11440.3 56.311 103 45 0 14 116 42 144 2.39e-36 135
Msa0181170 AT3G11440.4 56.311 103 45 0 14 116 42 144 2.39e-36 135
Msa0181170 AT3G11440.1 56.311 103 45 0 14 116 42 144 2.39e-36 135
Msa0181170 AT1G66370.1 55.340 103 46 0 14 116 9 111 2.73e-36 129
Msa0181170 AT5G59780.3 54.717 106 48 0 12 117 7 112 5.74e-36 128
Msa0181170 AT5G06100.1 52.727 110 52 0 14 123 33 142 7.57e-36 133
Msa0181170 AT1G25340.1 48.387 124 63 1 12 134 17 140 1.22e-35 129
Msa0181170 AT5G06100.5 52.727 110 52 0 14 123 33 142 2.08e-35 133
Msa0181170 AT5G06100.2 52.727 110 52 0 14 123 33 142 2.08e-35 133
Msa0181170 AT5G06100.3 52.727 110 52 0 14 123 33 142 2.08e-35 133
Msa0181170 AT5G06100.4 52.727 110 52 0 14 123 33 142 2.08e-35 133
Msa0181170 AT3G06490.1 54.783 115 51 1 14 128 20 133 2.38e-35 129
Msa0181170 AT3G53200.1 56.311 103 45 0 14 116 10 112 3.29e-35 126
Msa0181170 AT2G26960.1 55.446 101 45 0 15 115 22 122 4.02e-35 130
Msa0181170 AT3G46130.1 54.808 104 47 0 14 117 10 113 4.10e-35 127
Msa0181170 AT2G26950.1 47.706 109 57 0 15 123 18 126 9.94e-35 129
Msa0181170 AT4G26930.1 54.902 102 46 0 14 115 20 121 2.26e-34 128
Msa0181170 AT5G55020.1 50.909 110 54 0 14 123 27 136 3.00e-34 130
Msa0181170 AT1G66380.1 58.252 103 43 0 14 116 9 111 3.36e-34 121
Msa0181170 AT5G49620.1 53.913 115 52 1 14 128 27 140 6.73e-34 125
Msa0181170 AT3G60460.1 51.282 117 55 2 6 121 4 119 7.47e-34 125
Msa0181170 AT1G56650.1 52.174 115 55 0 14 128 9 123 1.79e-33 122
Msa0181170 AT5G26660.2 65.882 85 28 1 44 127 12 96 1.17e-32 122
Msa0181170 AT1G66390.1 53.153 111 52 0 6 116 1 111 1.57e-32 120
Msa0181170 AT3G12820.2 71.831 71 20 0 49 119 2 72 1.02e-31 116
Msa0181170 AT1G25340.2 45.968 124 61 2 12 134 17 135 1.94e-31 118
Msa0181170 AT1G25340.3 45.968 124 61 2 12 134 17 135 3.33e-31 118
Msa0181170 AT5G35550.2 68.000 75 24 0 46 120 50 124 1.79e-30 115
Msa0181170 AT5G59780.2 64.000 75 27 0 43 117 17 91 2.40e-30 113
Msa0181170 AT5G49620.2 48.062 129 52 2 14 128 27 154 2.93e-30 115
Msa0181170 AT3G46130.4 64.000 75 27 0 43 117 17 91 3.58e-30 113
Msa0181170 AT3G46130.3 64.384 73 26 0 45 117 9 81 1.29e-29 112
Msa0181170 AT3G47600.2 53.125 96 41 1 24 119 21 112 1.76e-29 114
Msa0181170 AT3G53200.2 63.158 76 28 0 41 116 4 79 2.51e-29 110
Msa0181170 AT5G40350.2 48.039 102 48 1 46 142 5 106 3.05e-29 109
Msa0181170 AT3G27810.2 46.296 108 57 1 46 152 4 111 1.32e-28 107
Msa0181170 AT5G14750.3 60.000 70 28 0 49 118 18 87 1.11e-27 105
Msa0181170 AT5G67300.1 49.038 104 52 1 15 118 6 108 1.66e-27 108
Msa0181170 AT3G50060.1 46.789 109 57 1 15 123 6 113 5.45e-27 106
Msa0181170 AT1G69560.1 38.356 146 75 3 15 159 107 238 1.30e-26 106
Msa0181170 AT1G69560.2 38.356 146 75 3 15 159 123 254 1.52e-26 106
Msa0181170 AT4G37260.1 50.000 104 51 1 15 118 13 115 1.56e-26 105
Msa0181170 AT1G17950.1 46.078 102 54 1 15 116 5 105 2.78e-26 103
Msa0181170 AT2G23290.1 49.038 104 52 1 15 118 13 115 3.89e-26 104
Msa0181170 AT5G11050.1 31.019 216 122 5 15 214 105 309 4.06e-26 106
Msa0181170 AT5G02320.1 36.869 198 103 7 11 208 123 298 9.00e-26 106
Msa0181170 AT5G02320.2 36.869 198 103 7 11 208 123 298 9.00e-26 106
Msa0181170 AT5G02320.3 36.869 198 103 7 11 208 63 238 1.22e-25 105
Msa0181170 AT2G39880.1 50.000 106 50 2 15 119 50 153 8.08e-25 102
Msa0181170 AT3G55730.1 50.476 105 49 2 15 118 56 158 9.29e-25 102
Msa0181170 AT3G09230.1 48.039 102 52 1 15 116 55 155 1.46e-24 101
Msa0181170 AT1G73410.1 44.660 103 56 1 15 117 6 107 4.03e-24 97.8
Msa0181170 AT4G33450.1 34.752 141 81 2 2 142 6 135 4.99e-24 97.8
Msa0181170 AT1G73410.2 44.660 103 56 1 15 117 6 107 8.41e-24 95.9
Msa0181170 AT1G26780.1 44.660 103 54 2 15 116 98 198 1.18e-23 97.4
Msa0181170 AT1G26780.2 44.660 103 54 2 15 116 98 198 1.46e-23 98.6
Msa0181170 AT3G23250.2 64.407 59 21 0 59 117 1 59 1.78e-23 95.9
Msa0181170 AT5G58850.1 36.090 133 78 2 15 147 105 230 6.25e-23 97.4
Msa0181170 AT4G32730.5 39.098 133 70 3 11 143 83 204 9.20e-23 98.2
Msa0181170 AT4G32730.5 35.849 106 66 2 15 119 35 139 1.92e-13 70.5
Msa0181170 AT4G32730.4 39.098 133 70 3 11 143 83 204 9.20e-23 98.2
Msa0181170 AT4G32730.4 35.849 106 66 2 15 119 35 139 1.92e-13 70.5
Msa0181170 AT4G32730.3 39.098 133 70 3 11 143 83 204 9.20e-23 98.2
Msa0181170 AT4G32730.3 35.849 106 66 2 15 119 35 139 1.92e-13 70.5
Msa0181170 AT4G32730.2 39.098 133 70 3 11 143 83 204 9.20e-23 98.2
Msa0181170 AT4G32730.2 35.849 106 66 2 15 119 35 139 1.92e-13 70.5
Msa0181170 AT4G32730.1 39.098 133 70 3 11 143 83 204 1.21e-22 97.8
Msa0181170 AT4G32730.1 35.849 106 66 2 15 119 35 139 2.29e-13 70.1
Msa0181170 AT1G22640.3 48.780 82 41 1 59 139 1 82 1.31e-22 92.8
Msa0181170 AT5G17800.1 40.517 116 63 2 15 130 93 202 2.07e-22 94.7
Msa0181170 AT1G66380.3 59.722 72 29 0 45 116 7 78 3.20e-22 89.0
Msa0181170 AT3G09370.2 43.396 106 59 1 11 116 131 235 7.53e-22 95.1
Msa0181170 AT3G09370.2 34.862 109 69 2 12 119 80 187 4.46e-13 69.3
Msa0181170 AT5G40360.1 39.130 115 68 2 3 117 146 258 7.91e-22 93.6
Msa0181170 AT3G09370.1 43.396 106 59 1 11 116 126 230 7.93e-22 94.7
Msa0181170 AT3G09370.1 34.862 109 69 2 12 119 75 182 5.05e-13 68.9
Msa0181170 AT4G18770.1 41.509 106 59 2 15 119 217 320 8.40e-22 94.4
Msa0181170 AT5G11510.3 37.500 120 74 1 11 130 77 195 8.76e-22 95.1
Msa0181170 AT5G11510.3 33.019 106 69 2 15 119 29 133 7.33e-11 62.8
Msa0181170 AT5G11510.1 37.500 120 74 1 11 130 77 195 8.76e-22 95.1
Msa0181170 AT5G11510.1 33.019 106 69 2 15 119 29 133 7.33e-11 62.8
Msa0181170 AT5G11510.4 37.500 120 74 1 11 130 77 195 8.76e-22 95.1
Msa0181170 AT5G11510.4 33.019 106 69 2 15 119 29 133 7.33e-11 62.8
Msa0181170 AT3G09370.3 43.396 106 59 1 11 116 139 243 8.99e-22 94.7
Msa0181170 AT3G09370.3 34.862 109 69 2 12 119 88 195 4.67e-13 69.3
Msa0181170 AT5G11510.2 37.500 120 74 1 11 130 77 195 1.21e-21 94.7
Msa0181170 AT5G11510.2 33.019 106 69 2 15 119 29 133 8.82e-11 62.4
Msa0181170 AT5G11510.5 37.500 120 74 1 11 130 77 195 1.29e-21 94.7
Msa0181170 AT5G11510.5 33.019 106 69 2 15 119 29 133 9.23e-11 62.4
Msa0181170 AT1G66380.2 52.941 85 40 0 6 90 1 85 1.56e-21 87.4
Msa0181170 AT3G27785.1 38.983 118 67 2 3 116 173 289 2.56e-21 93.2
Msa0181170 AT1G71030.1 53.333 75 34 1 45 119 13 86 3.82e-21 88.6
Msa0181170 AT1G71030.2 55.882 68 30 0 52 119 5 72 4.53e-21 88.2
Msa0181170 AT3G29020.1 34.641 153 88 4 15 160 65 212 4.78e-21 89.4
Msa0181170 AT5G39700.1 36.735 147 86 3 7 151 48 189 1.72e-20 86.7
Msa0181170 AT4G25560.2 44.094 127 52 2 71 178 2 128 2.68e-20 87.0
Msa0181170 AT2G25230.1 42.000 100 56 2 18 117 29 126 2.91e-20 87.4
Msa0181170 AT5G14750.4 55.000 60 27 0 59 118 1 60 3.01e-20 84.7
Msa0181170 AT5G14750.2 55.000 60 27 0 59 118 1 60 3.01e-20 84.7
Msa0181170 AT3G29020.2 39.806 103 61 1 15 117 67 168 4.07e-20 88.2
Msa0181170 AT1G18960.1 33.613 119 75 3 15 132 10 125 5.12e-19 85.1
Msa0181170 AT2G37630.1 36.667 120 72 2 18 135 7 124 4.08e-18 83.2
Msa0181170 AT2G02820.3 37.963 108 65 2 18 124 33 139 1.74e-17 81.3
Msa0181170 AT2G02820.1 37.963 108 65 2 18 124 33 139 2.88e-17 81.6
Msa0181170 AT2G02820.2 37.963 108 65 2 18 124 33 139 3.55e-17 81.3
Msa0181170 AT4G00540.2 37.391 115 68 2 6 117 94 207 6.86e-17 80.1
Msa0181170 AT4G00540.2 29.134 127 82 3 2 120 33 159 2.36e-12 67.0
Msa0181170 AT4G00540.1 37.391 115 68 2 6 117 92 205 1.03e-16 79.7
Msa0181170 AT4G00540.1 31.579 114 70 3 15 120 44 157 5.39e-12 65.9
Msa0181170 AT1G14350.2 37.273 110 67 2 18 126 28 136 2.17e-16 79.0
Msa0181170 AT1G14350.1 37.273 110 67 2 18 126 28 136 2.17e-16 79.0
Msa0181170 AT5G40430.1 36.893 103 62 3 15 117 54 153 3.98e-15 73.6
Msa0181170 AT5G59780.1 55.319 47 21 0 71 117 1 47 1.56e-12 64.7
Msa0181170 AT3G46130.2 55.319 47 21 0 71 117 1 47 2.53e-12 64.7
Msa0181170 AT3G18100.1 30.147 136 86 2 14 145 545 675 1.75e-11 64.7
Msa0181170 AT3G18100.3 30.147 136 86 2 14 145 497 627 1.84e-11 64.7
Msa0181170 AT3G18100.4 30.147 136 86 2 14 145 384 514 1.86e-11 64.7
Msa0181170 AT3G18100.2 30.147 136 86 2 14 145 332 462 2.13e-11 64.3
Msa0181170 AT5G61420.1 55.000 60 24 2 82 140 2 59 2.18e-11 63.2

Find 58 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATAATTTCATGTGTTTA+TGG 0.103017 1_4:-69347907 None:intergenic
CAAATCAAATTGTGGGAAAT+AGG 0.178747 1_4:+69347720 Msa0181170:CDS
AGAAACCAACCTGCCTTAAT+TGG 0.183204 1_4:-69345847 None:intergenic
AACAACCATGACCATGTTTA+AGG 0.206159 1_4:-69345813 None:intergenic
AACAAATTCAGTTGAATCTT+TGG 0.217456 1_4:+69347562 Msa0181170:CDS
ATCTCATTGTCTGTCCTTCC+TGG 0.240508 1_4:-69347293 None:intergenic
CTGAGTTTGTGATCTTCTTC+AGG 0.242651 1_4:-69345781 None:intergenic
AAATTGAAATCATTTGAATT+TGG 0.284356 1_4:-69347874 None:intergenic
TTGGAGCTCTGTCCCAATTA+AGG 0.299321 1_4:+69345834 Msa0181170:CDS
CAAAACATAGAAAAGGTTTA+TGG 0.327160 1_4:+69345755 Msa0181170:CDS
CATTCAGCAAACAATAGTTT+TGG 0.334613 1_4:-69347506 None:intergenic
TGATTCCATTTCCATAGCTT+TGG 0.339299 1_4:-69347354 None:intergenic
TAAGGTGGATTAACTATCTA+AGG 0.341722 1_4:+69346258 Msa0181170:CDS
GGTGCTTTGATGTGTCTCTT+TGG 0.342200 1_4:-69347480 None:intergenic
CATTGGATCATGTTAATAGT+AGG 0.371174 1_4:+69347534 Msa0181170:CDS
TTTATTAGGCAAAACAAAAT+GGG 0.375550 1_4:+69345706 Msa0181170:exon
AACTTTCCTCTCTTTAATCC+TGG 0.382456 1_4:-69346281 None:intergenic
AGGTTTGTCCATTGCATGCC+TGG 0.387994 1_4:+69347740 Msa0181170:CDS
GTTTGCTGAATGGCTTTCAT+TGG 0.388754 1_4:+69347517 Msa0181170:CDS
CAAATGATTTCAATTTCAAC+AGG 0.391661 1_4:+69347881 Msa0181170:three_prime_UTR
CAAAACTATTGTTTGCTGAA+TGG 0.398678 1_4:+69347507 Msa0181170:CDS
GAATCTTTGGTCATGAGAAA+TGG 0.412406 1_4:+69347575 Msa0181170:CDS
GAGAGGAAAGTTCAGCAAAC+AGG 0.416883 1_4:+69346292 Msa0181170:CDS
TTAAACATGGTCATGGTTGT+TGG 0.431623 1_4:+69345815 Msa0181170:CDS
AAATTTGCAAATCAAATTGT+GGG 0.441722 1_4:+69347713 Msa0181170:CDS
TAAATTTGCAAATCAAATTG+TGG 0.468216 1_4:+69347712 Msa0181170:CDS
AGTGGCCAAAGCTATGGAAA+TGG 0.470398 1_4:+69347349 Msa0181170:CDS
CTCACCCTTCATCACATGTT+AGG 0.480777 1_4:+69346329 Msa0181170:CDS
GAAACCAACCTGCCTTAATT+GGG 0.488214 1_4:-69345846 None:intergenic
AATGATGCAATGTACGTTTG+AGG 0.502056 1_4:+69347794 Msa0181170:CDS
ATGCAAGAGGGACCATTCAA+TGG 0.504386 1_4:+69347632 Msa0181170:CDS
TGAAATCATTTGAATTTGGT+AGG 0.507198 1_4:-69347870 None:intergenic
ACAAAACCAAAACATAGAAA+AGG 0.509605 1_4:+69345748 Msa0181170:CDS
AAAGAGAGTGGCCAAAGCTA+TGG 0.515504 1_4:+69347343 Msa0181170:CDS
TTATGAAACTCTCCATTGAA+TGG 0.518250 1_4:-69347644 None:intergenic
TGTATAGGCTTGCAAAGGAA+TGG 0.519565 1_4:+69346221 Msa0181170:intron
TGGATTAACTATCTAAGGCC+AGG 0.519824 1_4:+69346263 Msa0181170:CDS
AAAGTTCAGCAAACAGGAGG+AGG 0.533564 1_4:+69346298 Msa0181170:CDS
GTGATGTTGTTATAATTGTG+TGG 0.534849 1_4:-69347458 None:intergenic
AGCTCTGTCCCAATTAAGGC+AGG 0.541894 1_4:+69345838 Msa0181170:CDS
CATCTCAGTGGCTGAAATGT+TGG 0.543027 1_4:-69347675 None:intergenic
TTGTTACTTAAATCAACTCC+AGG 0.543581 1_4:-69347758 None:intergenic
CAGATAGCACAACATTTGCC+AGG 0.553213 1_4:+69347275 Msa0181170:CDS
TGTTGCCTAACATGTGATGA+AGG 0.568808 1_4:-69346334 None:intergenic
AATCATTTGAATTTGGTAGG+AGG 0.569655 1_4:-69347867 None:intergenic
AATCAACTCCAGGCATGCAA+TGG 0.573572 1_4:-69347748 None:intergenic
TAGCACAACATTTGCCAGGA+AGG 0.581725 1_4:+69347279 Msa0181170:CDS
TCAAGAAGCTACAATGCAAG+AGG 0.583454 1_4:+69347619 Msa0181170:CDS
TACATCCTTAAACATGGTCA+TGG 0.598095 1_4:+69345808 Msa0181170:CDS
TTATTAGGCAAAACAAAATG+GGG 0.614230 1_4:+69345707 Msa0181170:exon
CTAAGGCCAGGATTAAAGAG+AGG 0.629264 1_4:+69346275 Msa0181170:CDS
AGGAAAGTTCAGCAAACAGG+AGG 0.649041 1_4:+69346295 Msa0181170:CDS
CAAGAAGCTACAATGCAAGA+GGG 0.649433 1_4:+69347620 Msa0181170:CDS
ATACATGTATAGGCTTGCAA+AGG 0.656359 1_4:+69346216 Msa0181170:intron
AGAAACTACATCCTTAAACA+TGG 0.675410 1_4:+69345802 Msa0181170:CDS
CTAACATGTGATGAAGGGTG+AGG 0.683728 1_4:-69346328 None:intergenic
GTTGCCTAACATGTGATGAA+GGG 0.702714 1_4:-69346333 None:intergenic
CTGTGAATTGAACATCTCAG+TGG 0.748090 1_4:-69347687 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAGATAATTTTAAATAG+TGG - chr1_4:69346932-69346951 None:intergenic 10.0%
!! AGAATTAACTTAAATTATAT+TGG + chr1_4:69347241-69347260 Msa0181170:intron 10.0%
!!! TTTTAGATAATTTTAAATAG+TGG - chr1_4:69346932-69346951 None:intergenic 10.0%
!! AGAATTAACTTAAATTATAT+TGG + chr1_4:69347241-69347260 Msa0181170:intron 10.0%
!!! ATTTAAAGTGAAGTTTTATT+AGG + chr1_4:69345692-69345711 Msa0181170:five_prime_UTR 15.0%
!!! TTTAAGTTAGAGAATATAAT+TGG + chr1_4:69346454-69346473 Msa0181170:intron 15.0%
!! ATATTAAATCATCTATCAAA+TGG - chr1_4:69346906-69346925 None:intergenic 15.0%
!! AAATTGAAATCATTTGAATT+TGG - chr1_4:69347877-69347896 None:intergenic 15.0%
!!! ATTTAAAGTGAAGTTTTATT+AGG + chr1_4:69345692-69345711 Msa0181170:five_prime_UTR 15.0%
!!! TTTAAGTTAGAGAATATAAT+TGG + chr1_4:69346454-69346473 Msa0181170:intron 15.0%
!! ATATTAAATCATCTATCAAA+TGG - chr1_4:69346906-69346925 None:intergenic 15.0%
!! AAATTGAAATCATTTGAATT+TGG - chr1_4:69347877-69347896 None:intergenic 15.0%
!!! TTTTATTAGGCAAAACAAAA+TGG + chr1_4:69345705-69345724 Msa0181170:exon 20.0%
!! TTTATTAGGCAAAACAAAAT+GGG + chr1_4:69345706-69345725 Msa0181170:exon 20.0%
!! CCTACTTATAAATATGATTA+GGG - chr1_4:69345896-69345915 None:intergenic 20.0%
!! ACCTACTTATAAATATGATT+AGG - chr1_4:69345897-69345916 None:intergenic 20.0%
!!! TTGATTTTTGCTAAAATGTA+TGG + chr1_4:69346127-69346146 Msa0181170:intron 20.0%
!! TATTCAATTGTTCTATCTAA+TGG + chr1_4:69346182-69346201 Msa0181170:intron 20.0%
!!! TTTATTTTATAGAAGCAACT+AGG + chr1_4:69346506-69346525 Msa0181170:intron 20.0%
!! TAACTTAAATTATATTGGTC+AGG + chr1_4:69347246-69347265 Msa0181170:intron 20.0%
!! ACAATGAGATAAAAAACTAT+TGG + chr1_4:69347306-69347325 Msa0181170:CDS 20.0%
!! TAAATTTGCAAATCAAATTG+TGG + chr1_4:69347712-69347731 Msa0181170:CDS 20.0%
!! AAATTTGCAAATCAAATTGT+GGG + chr1_4:69347713-69347732 Msa0181170:CDS 20.0%
!! CAAATAATTTCATGTGTTTA+TGG - chr1_4:69347910-69347929 None:intergenic 20.0%
!!! TTTTATTAGGCAAAACAAAA+TGG + chr1_4:69345705-69345724 Msa0181170:exon 20.0%
!! TTTATTAGGCAAAACAAAAT+GGG + chr1_4:69345706-69345725 Msa0181170:exon 20.0%
!! CCTACTTATAAATATGATTA+GGG - chr1_4:69345896-69345915 None:intergenic 20.0%
!! ACCTACTTATAAATATGATT+AGG - chr1_4:69345897-69345916 None:intergenic 20.0%
!!! TTGATTTTTGCTAAAATGTA+TGG + chr1_4:69346127-69346146 Msa0181170:intron 20.0%
!! TATTCAATTGTTCTATCTAA+TGG + chr1_4:69346182-69346201 Msa0181170:intron 20.0%
!!! TTTATTTTATAGAAGCAACT+AGG + chr1_4:69346506-69346525 Msa0181170:intron 20.0%
!! TAACTTAAATTATATTGGTC+AGG + chr1_4:69347246-69347265 Msa0181170:intron 20.0%
!! ACAATGAGATAAAAAACTAT+TGG + chr1_4:69347306-69347325 Msa0181170:CDS 20.0%
!! TAAATTTGCAAATCAAATTG+TGG + chr1_4:69347712-69347731 Msa0181170:CDS 20.0%
!! AAATTTGCAAATCAAATTGT+GGG + chr1_4:69347713-69347732 Msa0181170:CDS 20.0%
!! CAAATAATTTCATGTGTTTA+TGG - chr1_4:69347910-69347929 None:intergenic 20.0%
! TTATTAGGCAAAACAAAATG+GGG + chr1_4:69345707-69345726 Msa0181170:exon 25.0%
! ACAAAACCAAAACATAGAAA+AGG + chr1_4:69345748-69345767 Msa0181170:CDS 25.0%
!! CATAAACCTTTTCTATGTTT+TGG - chr1_4:69345757-69345776 None:intergenic 25.0%
! CAAAACATAGAAAAGGTTTA+TGG + chr1_4:69345755-69345774 Msa0181170:CDS 25.0%
! CCCTAATCATATTTATAAGT+AGG + chr1_4:69345893-69345912 Msa0181170:intron 25.0%
! TAAGAGTTTGAATCCTAAAA+TGG + chr1_4:69345961-69345980 Msa0181170:intron 25.0%
! TCAACAGTTCTTAATAACTA+AGG - chr1_4:69346111-69346130 None:intergenic 25.0%
!! AATTCACTACTTTGAACTTT+TGG - chr1_4:69346422-69346441 None:intergenic 25.0%
! GTTAGAGAATATAATTGGAT+TGG + chr1_4:69346459-69346478 Msa0181170:intron 25.0%
! ATGGAAGAAAAAAAAAAGCA+TGG + chr1_4:69346538-69346557 Msa0181170:intron 25.0%
!! CATGCTCTTCTTTTTAATAA+TGG + chr1_4:69346599-69346618 Msa0181170:intron 25.0%
! AATATACAGAATTGAGGAAT+AGG - chr1_4:69346654-69346673 None:intergenic 25.0%
! AGTTTGAATATACAGAATTG+AGG - chr1_4:69346660-69346679 None:intergenic 25.0%
! TCATTTATTTCCAATTACCA+AGG + chr1_4:69346841-69346860 Msa0181170:intron 25.0%
!!! TCTTTTTTCCCTTTAAATGA+AGG + chr1_4:69347210-69347229 Msa0181170:intron 25.0%
! CTTATCATCCTTCATTTAAA+GGG - chr1_4:69347221-69347240 None:intergenic 25.0%
! TCTTATCATCCTTCATTTAA+AGG - chr1_4:69347222-69347241 None:intergenic 25.0%
! TTCATATTTGAAAAAGAGAG+TGG + chr1_4:69347331-69347350 Msa0181170:CDS 25.0%
! AACAAATTCAGTTGAATCTT+TGG + chr1_4:69347562-69347581 Msa0181170:CDS 25.0%
! TGAAATCATTTGAATTTGGT+AGG - chr1_4:69347873-69347892 None:intergenic 25.0%
! CAAATGATTTCAATTTCAAC+AGG + chr1_4:69347881-69347900 Msa0181170:three_prime_UTR 25.0%
! TTATTAGGCAAAACAAAATG+GGG + chr1_4:69345707-69345726 Msa0181170:exon 25.0%
! ACAAAACCAAAACATAGAAA+AGG + chr1_4:69345748-69345767 Msa0181170:CDS 25.0%
!! CATAAACCTTTTCTATGTTT+TGG - chr1_4:69345757-69345776 None:intergenic 25.0%
! CAAAACATAGAAAAGGTTTA+TGG + chr1_4:69345755-69345774 Msa0181170:CDS 25.0%
! CCCTAATCATATTTATAAGT+AGG + chr1_4:69345893-69345912 Msa0181170:intron 25.0%
! TAAGAGTTTGAATCCTAAAA+TGG + chr1_4:69345961-69345980 Msa0181170:intron 25.0%
! TCAACAGTTCTTAATAACTA+AGG - chr1_4:69346111-69346130 None:intergenic 25.0%
!! AATTCACTACTTTGAACTTT+TGG - chr1_4:69346422-69346441 None:intergenic 25.0%
! GTTAGAGAATATAATTGGAT+TGG + chr1_4:69346459-69346478 Msa0181170:intron 25.0%
! ATGGAAGAAAAAAAAAAGCA+TGG + chr1_4:69346538-69346557 Msa0181170:intron 25.0%
!! CATGCTCTTCTTTTTAATAA+TGG + chr1_4:69346599-69346618 Msa0181170:intron 25.0%
! AATATACAGAATTGAGGAAT+AGG - chr1_4:69346654-69346673 None:intergenic 25.0%
! AGTTTGAATATACAGAATTG+AGG - chr1_4:69346660-69346679 None:intergenic 25.0%
! TCATTTATTTCCAATTACCA+AGG + chr1_4:69346841-69346860 Msa0181170:intron 25.0%
!!! TCTTTTTTCCCTTTAAATGA+AGG + chr1_4:69347210-69347229 Msa0181170:intron 25.0%
! CTTATCATCCTTCATTTAAA+GGG - chr1_4:69347221-69347240 None:intergenic 25.0%
! TCTTATCATCCTTCATTTAA+AGG - chr1_4:69347222-69347241 None:intergenic 25.0%
! TTCATATTTGAAAAAGAGAG+TGG + chr1_4:69347331-69347350 Msa0181170:CDS 25.0%
! AACAAATTCAGTTGAATCTT+TGG + chr1_4:69347562-69347581 Msa0181170:CDS 25.0%
! TGAAATCATTTGAATTTGGT+AGG - chr1_4:69347873-69347892 None:intergenic 25.0%
! CAAATGATTTCAATTTCAAC+AGG + chr1_4:69347881-69347900 Msa0181170:three_prime_UTR 25.0%
!!! TTTGGTTTTGTCTTTTCTAG+TGG - chr1_4:69345739-69345758 None:intergenic 30.0%
AGAAACTACATCCTTAAACA+TGG + chr1_4:69345802-69345821 Msa0181170:CDS 30.0%
TTGGTTTCTTTCTTCTTCAA+AGG + chr1_4:69345861-69345880 Msa0181170:intron 30.0%
GTACAATGTCATACATGTAT+AGG + chr1_4:69346206-69346225 Msa0181170:intron 30.0%
!! TAAGGTGGATTAACTATCTA+AGG + chr1_4:69346258-69346277 Msa0181170:CDS 30.0%
! AGAGAATATAATTGGATTGG+AGG + chr1_4:69346462-69346481 Msa0181170:intron 30.0%
! GAGAATATAATTGGATTGGA+GGG + chr1_4:69346463-69346482 Msa0181170:intron 30.0%
! AAAAAAAAGCATGGCTTGAT+TGG + chr1_4:69346547-69346566 Msa0181170:intron 30.0%
TTCAAACTAAGCCTATTTCA+AGG + chr1_4:69346672-69346691 Msa0181170:intron 30.0%
GTGAAGGAAAATTCTATAGA+AGG - chr1_4:69346707-69346726 None:intergenic 30.0%
!!! GTGTGTGTAGCAATTTTTTT+TGG - chr1_4:69346792-69346811 None:intergenic 30.0%
AAAAGCCTAATGATGATTGA+TGG + chr1_4:69346948-69346967 Msa0181170:intron 30.0%
AAACACCATCAATCATCATT+AGG - chr1_4:69346956-69346975 None:intergenic 30.0%
CTTAAATTATATTGGTCAGG+TGG + chr1_4:69347249-69347268 Msa0181170:intron 30.0%
GTGATGTTGTTATAATTGTG+TGG - chr1_4:69347461-69347480 None:intergenic 30.0%
!!! AGCAAACAATAGTTTTGGTA+AGG - chr1_4:69347504-69347523 None:intergenic 30.0%
! CATTCAGCAAACAATAGTTT+TGG - chr1_4:69347509-69347528 None:intergenic 30.0%
! CAAAACTATTGTTTGCTGAA+TGG + chr1_4:69347507-69347526 Msa0181170:CDS 30.0%
CATTGGATCATGTTAATAGT+AGG + chr1_4:69347534-69347553 Msa0181170:CDS 30.0%
TTATGAAACTCTCCATTGAA+TGG - chr1_4:69347647-69347666 None:intergenic 30.0%
CAAATCAAATTGTGGGAAAT+AGG + chr1_4:69347720-69347739 Msa0181170:CDS 30.0%
! TTGTTACTTAAATCAACTCC+AGG - chr1_4:69347761-69347780 None:intergenic 30.0%
AATCATTTGAATTTGGTAGG+AGG - chr1_4:69347870-69347889 None:intergenic 30.0%
!!! TTTGGTTTTGTCTTTTCTAG+TGG - chr1_4:69345739-69345758 None:intergenic 30.0%
AGAAACTACATCCTTAAACA+TGG + chr1_4:69345802-69345821 Msa0181170:CDS 30.0%
TTGGTTTCTTTCTTCTTCAA+AGG + chr1_4:69345861-69345880 Msa0181170:intron 30.0%
GTACAATGTCATACATGTAT+AGG + chr1_4:69346206-69346225 Msa0181170:intron 30.0%
!! TAAGGTGGATTAACTATCTA+AGG + chr1_4:69346258-69346277 Msa0181170:CDS 30.0%
! AGAGAATATAATTGGATTGG+AGG + chr1_4:69346462-69346481 Msa0181170:intron 30.0%
! GAGAATATAATTGGATTGGA+GGG + chr1_4:69346463-69346482 Msa0181170:intron 30.0%
! AAAAAAAAGCATGGCTTGAT+TGG + chr1_4:69346547-69346566 Msa0181170:intron 30.0%
TTCAAACTAAGCCTATTTCA+AGG + chr1_4:69346672-69346691 Msa0181170:intron 30.0%
GTGAAGGAAAATTCTATAGA+AGG - chr1_4:69346707-69346726 None:intergenic 30.0%
!!! GTGTGTGTAGCAATTTTTTT+TGG - chr1_4:69346792-69346811 None:intergenic 30.0%
AAAAGCCTAATGATGATTGA+TGG + chr1_4:69346948-69346967 Msa0181170:intron 30.0%
AAACACCATCAATCATCATT+AGG - chr1_4:69346956-69346975 None:intergenic 30.0%
CTTAAATTATATTGGTCAGG+TGG + chr1_4:69347249-69347268 Msa0181170:intron 30.0%
GTGATGTTGTTATAATTGTG+TGG - chr1_4:69347461-69347480 None:intergenic 30.0%
!!! AGCAAACAATAGTTTTGGTA+AGG - chr1_4:69347504-69347523 None:intergenic 30.0%
! CATTCAGCAAACAATAGTTT+TGG - chr1_4:69347509-69347528 None:intergenic 30.0%
! CAAAACTATTGTTTGCTGAA+TGG + chr1_4:69347507-69347526 Msa0181170:CDS 30.0%
CATTGGATCATGTTAATAGT+AGG + chr1_4:69347534-69347553 Msa0181170:CDS 30.0%
TTATGAAACTCTCCATTGAA+TGG - chr1_4:69347647-69347666 None:intergenic 30.0%
CAAATCAAATTGTGGGAAAT+AGG + chr1_4:69347720-69347739 Msa0181170:CDS 30.0%
! TTGTTACTTAAATCAACTCC+AGG - chr1_4:69347761-69347780 None:intergenic 30.0%
AATCATTTGAATTTGGTAGG+AGG - chr1_4:69347870-69347889 None:intergenic 30.0%
TACATCCTTAAACATGGTCA+TGG + chr1_4:69345808-69345827 Msa0181170:CDS 35.0%
AACAACCATGACCATGTTTA+AGG - chr1_4:69345816-69345835 None:intergenic 35.0%
TTAAACATGGTCATGGTTGT+TGG + chr1_4:69345815-69345834 Msa0181170:CDS 35.0%
!! ATTTAAAGTTTTTGCCCGTG+AGG + chr1_4:69345924-69345943 Msa0181170:intron 35.0%
!! GTGACATTGATGACCATTTT+AGG - chr1_4:69345977-69345996 None:intergenic 35.0%
ATACATGTATAGGCTTGCAA+AGG + chr1_4:69346216-69346235 Msa0181170:intron 35.0%
AACTTTCCTCTCTTTAATCC+TGG - chr1_4:69346284-69346303 None:intergenic 35.0%
! AGCAACTAGGCTCTATTTTA+TGG + chr1_4:69346519-69346538 Msa0181170:intron 35.0%
GGAACACATAACCTTGAAAT+AGG - chr1_4:69346686-69346705 None:intergenic 35.0%
! CTACTGATTGAAGTTTGTGA+AGG - chr1_4:69346723-69346742 None:intergenic 35.0%
! TTTCATCTCTCCTTGGTAAT+TGG - chr1_4:69346854-69346873 None:intergenic 35.0%
AGGTTTATTTCATCTCTCCT+TGG - chr1_4:69346861-69346880 None:intergenic 35.0%
AGAGATGAAATAAACCTGTG+TGG + chr1_4:69346864-69346883 Msa0181170:intron 35.0%
ATTCCTCGTCCTTACTATTA+AGG + chr1_4:69346998-69347017 Msa0181170:intron 35.0%
ATGTCATCGCCTTAATAGTA+AGG - chr1_4:69347010-69347029 None:intergenic 35.0%
! GAAGTTTAGAATTCTCCTTG+TGG - chr1_4:69347148-69347167 None:intergenic 35.0%
TGATTCCATTTCCATAGCTT+TGG - chr1_4:69347357-69347376 None:intergenic 35.0%
!! GTTGCAAGTTTTTGAAGAGA+GGG - chr1_4:69347431-69347450 None:intergenic 35.0%
!! TGTTGCAAGTTTTTGAAGAG+AGG - chr1_4:69347432-69347451 None:intergenic 35.0%
GAATCTTTGGTCATGAGAAA+TGG + chr1_4:69347575-69347594 Msa0181170:CDS 35.0%
AATGATGCAATGTACGTTTG+AGG + chr1_4:69347794-69347813 Msa0181170:CDS 35.0%
TACATCCTTAAACATGGTCA+TGG + chr1_4:69345808-69345827 Msa0181170:CDS 35.0%
AACAACCATGACCATGTTTA+AGG - chr1_4:69345816-69345835 None:intergenic 35.0%
TTAAACATGGTCATGGTTGT+TGG + chr1_4:69345815-69345834 Msa0181170:CDS 35.0%
!! ATTTAAAGTTTTTGCCCGTG+AGG + chr1_4:69345924-69345943 Msa0181170:intron 35.0%
!! GTGACATTGATGACCATTTT+AGG - chr1_4:69345977-69345996 None:intergenic 35.0%
ATACATGTATAGGCTTGCAA+AGG + chr1_4:69346216-69346235 Msa0181170:intron 35.0%
AACTTTCCTCTCTTTAATCC+TGG - chr1_4:69346284-69346303 None:intergenic 35.0%
! AGCAACTAGGCTCTATTTTA+TGG + chr1_4:69346519-69346538 Msa0181170:intron 35.0%
GGAACACATAACCTTGAAAT+AGG - chr1_4:69346686-69346705 None:intergenic 35.0%
! CTACTGATTGAAGTTTGTGA+AGG - chr1_4:69346723-69346742 None:intergenic 35.0%
! TTTCATCTCTCCTTGGTAAT+TGG - chr1_4:69346854-69346873 None:intergenic 35.0%
AGGTTTATTTCATCTCTCCT+TGG - chr1_4:69346861-69346880 None:intergenic 35.0%
AGAGATGAAATAAACCTGTG+TGG + chr1_4:69346864-69346883 Msa0181170:intron 35.0%
ATTCCTCGTCCTTACTATTA+AGG + chr1_4:69346998-69347017 Msa0181170:intron 35.0%
ATGTCATCGCCTTAATAGTA+AGG - chr1_4:69347010-69347029 None:intergenic 35.0%
! GAAGTTTAGAATTCTCCTTG+TGG - chr1_4:69347148-69347167 None:intergenic 35.0%
TGATTCCATTTCCATAGCTT+TGG - chr1_4:69347357-69347376 None:intergenic 35.0%
!! GTTGCAAGTTTTTGAAGAGA+GGG - chr1_4:69347431-69347450 None:intergenic 35.0%
!! TGTTGCAAGTTTTTGAAGAG+AGG - chr1_4:69347432-69347451 None:intergenic 35.0%
GAATCTTTGGTCATGAGAAA+TGG + chr1_4:69347575-69347594 Msa0181170:CDS 35.0%
AATGATGCAATGTACGTTTG+AGG + chr1_4:69347794-69347813 Msa0181170:CDS 35.0%
!! GTTTTGTCTTTTCTAGTGGC+TGG - chr1_4:69345735-69345754 None:intergenic 40.0%
CTGAGTTTGTGATCTTCTTC+AGG - chr1_4:69345784-69345803 None:intergenic 40.0%
GAAACCAACCTGCCTTAATT+GGG - chr1_4:69345849-69345868 None:intergenic 40.0%
AGAAACCAACCTGCCTTAAT+TGG - chr1_4:69345850-69345869 None:intergenic 40.0%
TGTATAGGCTTGCAAAGGAA+TGG + chr1_4:69346221-69346240 Msa0181170:intron 40.0%
ATGGAAAAAGCTGCAGACTA+AGG + chr1_4:69346240-69346259 Msa0181170:CDS 40.0%
! TGGATTAACTATCTAAGGCC+AGG + chr1_4:69346263-69346282 Msa0181170:CDS 40.0%
GTTGCCTAACATGTGATGAA+GGG - chr1_4:69346336-69346355 None:intergenic 40.0%
TGTTGCCTAACATGTGATGA+AGG - chr1_4:69346337-69346356 None:intergenic 40.0%
CTTGATTGGTAAGTCAAACC+AGG + chr1_4:69346561-69346580 Msa0181170:intron 40.0%
TGGTAAGTCAAACCAGGAAT+TGG + chr1_4:69346567-69346586 Msa0181170:intron 40.0%
TAAACCTGTGTGGTGAGATT+TGG + chr1_4:69346874-69346893 Msa0181170:intron 40.0%
AAACCTGTGTGGTGAGATTT+GGG + chr1_4:69346875-69346894 Msa0181170:intron 40.0%
! GTTTGCTGAATGGCTTTCAT+TGG + chr1_4:69347517-69347536 Msa0181170:CDS 40.0%
TCAAGAAGCTACAATGCAAG+AGG + chr1_4:69347619-69347638 Msa0181170:CDS 40.0%
CAAGAAGCTACAATGCAAGA+GGG + chr1_4:69347620-69347639 Msa0181170:CDS 40.0%
CTGTGAATTGAACATCTCAG+TGG - chr1_4:69347690-69347709 None:intergenic 40.0%
!! GTTTTGTCTTTTCTAGTGGC+TGG - chr1_4:69345735-69345754 None:intergenic 40.0%
CTGAGTTTGTGATCTTCTTC+AGG - chr1_4:69345784-69345803 None:intergenic 40.0%
GAAACCAACCTGCCTTAATT+GGG - chr1_4:69345849-69345868 None:intergenic 40.0%
AGAAACCAACCTGCCTTAAT+TGG - chr1_4:69345850-69345869 None:intergenic 40.0%
TGTATAGGCTTGCAAAGGAA+TGG + chr1_4:69346221-69346240 Msa0181170:intron 40.0%
ATGGAAAAAGCTGCAGACTA+AGG + chr1_4:69346240-69346259 Msa0181170:CDS 40.0%
! TGGATTAACTATCTAAGGCC+AGG + chr1_4:69346263-69346282 Msa0181170:CDS 40.0%
GTTGCCTAACATGTGATGAA+GGG - chr1_4:69346336-69346355 None:intergenic 40.0%
TGTTGCCTAACATGTGATGA+AGG - chr1_4:69346337-69346356 None:intergenic 40.0%
CTTGATTGGTAAGTCAAACC+AGG + chr1_4:69346561-69346580 Msa0181170:intron 40.0%
TGGTAAGTCAAACCAGGAAT+TGG + chr1_4:69346567-69346586 Msa0181170:intron 40.0%
TAAACCTGTGTGGTGAGATT+TGG + chr1_4:69346874-69346893 Msa0181170:intron 40.0%
AAACCTGTGTGGTGAGATTT+GGG + chr1_4:69346875-69346894 Msa0181170:intron 40.0%
! GTTTGCTGAATGGCTTTCAT+TGG + chr1_4:69347517-69347536 Msa0181170:CDS 40.0%
TCAAGAAGCTACAATGCAAG+AGG + chr1_4:69347619-69347638 Msa0181170:CDS 40.0%
CAAGAAGCTACAATGCAAGA+GGG + chr1_4:69347620-69347639 Msa0181170:CDS 40.0%
CTGTGAATTGAACATCTCAG+TGG - chr1_4:69347690-69347709 None:intergenic 40.0%
TTGGAGCTCTGTCCCAATTA+AGG + chr1_4:69345834-69345853 Msa0181170:CDS 45.0%
ACTACAAAGCTGACACCTCA+CGG - chr1_4:69345942-69345961 None:intergenic 45.0%
GAAAAAGCTGCAGACTAAGG+TGG + chr1_4:69346243-69346262 Msa0181170:CDS 45.0%
CTAAGGCCAGGATTAAAGAG+AGG + chr1_4:69346275-69346294 Msa0181170:CDS 45.0%
GAGAGGAAAGTTCAGCAAAC+AGG + chr1_4:69346292-69346311 Msa0181170:CDS 45.0%
AGGAAAGTTCAGCAAACAGG+AGG + chr1_4:69346295-69346314 Msa0181170:CDS 45.0%
AAAGTTCAGCAAACAGGAGG+AGG + chr1_4:69346298-69346317 Msa0181170:CDS 45.0%
CTAACATGTGATGAAGGGTG+AGG - chr1_4:69346331-69346350 None:intergenic 45.0%
CTCACCCTTCATCACATGTT+AGG + chr1_4:69346329-69346348 Msa0181170:CDS 45.0%
AGTCAAACCAGGAATTGGCT+TGG + chr1_4:69346572-69346591 Msa0181170:intron 45.0%
ATGCTAACCAAGCCAATTCC+TGG - chr1_4:69346582-69346601 None:intergenic 45.0%
AACCTGTGTGGTGAGATTTG+GGG + chr1_4:69346876-69346895 Msa0181170:intron 45.0%
TCGCCTTAATAGTAAGGACG+AGG - chr1_4:69347004-69347023 None:intergenic 45.0%
GACTATGACGCAATAGGTGT+TGG - chr1_4:69347121-69347140 None:intergenic 45.0%
GGTTGAGACTATGACGCAAT+AGG - chr1_4:69347127-69347146 None:intergenic 45.0%
CAGATAGCACAACATTTGCC+AGG + chr1_4:69347275-69347294 Msa0181170:CDS 45.0%
TAGCACAACATTTGCCAGGA+AGG + chr1_4:69347279-69347298 Msa0181170:CDS 45.0%
ATCTCATTGTCTGTCCTTCC+TGG - chr1_4:69347296-69347315 None:intergenic 45.0%
AAAGAGAGTGGCCAAAGCTA+TGG + chr1_4:69347343-69347362 Msa0181170:CDS 45.0%
AGTGGCCAAAGCTATGGAAA+TGG + chr1_4:69347349-69347368 Msa0181170:CDS 45.0%
GGTGCTTTGATGTGTCTCTT+TGG - chr1_4:69347483-69347502 None:intergenic 45.0%
ATGCAAGAGGGACCATTCAA+TGG + chr1_4:69347632-69347651 Msa0181170:CDS 45.0%
CATCTCAGTGGCTGAAATGT+TGG - chr1_4:69347678-69347697 None:intergenic 45.0%
AATCAACTCCAGGCATGCAA+TGG - chr1_4:69347751-69347770 None:intergenic 45.0%
TTGGAGCTCTGTCCCAATTA+AGG + chr1_4:69345834-69345853 Msa0181170:CDS 45.0%
ACTACAAAGCTGACACCTCA+CGG - chr1_4:69345942-69345961 None:intergenic 45.0%
GAAAAAGCTGCAGACTAAGG+TGG + chr1_4:69346243-69346262 Msa0181170:CDS 45.0%
CTAAGGCCAGGATTAAAGAG+AGG + chr1_4:69346275-69346294 Msa0181170:CDS 45.0%
GAGAGGAAAGTTCAGCAAAC+AGG + chr1_4:69346292-69346311 Msa0181170:CDS 45.0%
AGGAAAGTTCAGCAAACAGG+AGG + chr1_4:69346295-69346314 Msa0181170:CDS 45.0%
AAAGTTCAGCAAACAGGAGG+AGG + chr1_4:69346298-69346317 Msa0181170:CDS 45.0%
CTAACATGTGATGAAGGGTG+AGG - chr1_4:69346331-69346350 None:intergenic 45.0%
CTCACCCTTCATCACATGTT+AGG + chr1_4:69346329-69346348 Msa0181170:CDS 45.0%
AGTCAAACCAGGAATTGGCT+TGG + chr1_4:69346572-69346591 Msa0181170:intron 45.0%
ATGCTAACCAAGCCAATTCC+TGG - chr1_4:69346582-69346601 None:intergenic 45.0%
AACCTGTGTGGTGAGATTTG+GGG + chr1_4:69346876-69346895 Msa0181170:intron 45.0%
TCGCCTTAATAGTAAGGACG+AGG - chr1_4:69347004-69347023 None:intergenic 45.0%
GACTATGACGCAATAGGTGT+TGG - chr1_4:69347121-69347140 None:intergenic 45.0%
GGTTGAGACTATGACGCAAT+AGG - chr1_4:69347127-69347146 None:intergenic 45.0%
CAGATAGCACAACATTTGCC+AGG + chr1_4:69347275-69347294 Msa0181170:CDS 45.0%
TAGCACAACATTTGCCAGGA+AGG + chr1_4:69347279-69347298 Msa0181170:CDS 45.0%
ATCTCATTGTCTGTCCTTCC+TGG - chr1_4:69347296-69347315 None:intergenic 45.0%
AAAGAGAGTGGCCAAAGCTA+TGG + chr1_4:69347343-69347362 Msa0181170:CDS 45.0%
AGTGGCCAAAGCTATGGAAA+TGG + chr1_4:69347349-69347368 Msa0181170:CDS 45.0%
GGTGCTTTGATGTGTCTCTT+TGG - chr1_4:69347483-69347502 None:intergenic 45.0%
ATGCAAGAGGGACCATTCAA+TGG + chr1_4:69347632-69347651 Msa0181170:CDS 45.0%
CATCTCAGTGGCTGAAATGT+TGG - chr1_4:69347678-69347697 None:intergenic 45.0%
AATCAACTCCAGGCATGCAA+TGG - chr1_4:69347751-69347770 None:intergenic 45.0%
AGCTCTGTCCCAATTAAGGC+AGG + chr1_4:69345838-69345857 Msa0181170:CDS 50.0%
CTGTCCCAATTAAGGCAGGT+TGG + chr1_4:69345842-69345861 Msa0181170:intron 50.0%
CTACAAAGCTGACACCTCAC+GGG - chr1_4:69345941-69345960 None:intergenic 50.0%
GCGTCATAGTCTCAACCACA+AGG + chr1_4:69347130-69347149 Msa0181170:intron 50.0%
AGGTTTGTCCATTGCATGCC+TGG + chr1_4:69347740-69347759 Msa0181170:CDS 50.0%
AGCTCTGTCCCAATTAAGGC+AGG + chr1_4:69345838-69345857 Msa0181170:CDS 50.0%
CTGTCCCAATTAAGGCAGGT+TGG + chr1_4:69345842-69345861 Msa0181170:intron 50.0%
CTACAAAGCTGACACCTCAC+GGG - chr1_4:69345941-69345960 None:intergenic 50.0%
GCGTCATAGTCTCAACCACA+AGG + chr1_4:69347130-69347149 Msa0181170:intron 50.0%
AGGTTTGTCCATTGCATGCC+TGG + chr1_4:69347740-69347759 Msa0181170:CDS 50.0%
CACCCCAAATCTCACCACAC+AGG - chr1_4:69346881-69346900 None:intergenic 55.0%
CTGTGTGGTGAGATTTGGGG+TGG + chr1_4:69346879-69346898 Msa0181170:intron 55.0%
CACCCCAAATCTCACCACAC+AGG - chr1_4:69346881-69346900 None:intergenic 55.0%
CTGTGTGGTGAGATTTGGGG+TGG + chr1_4:69346879-69346898 Msa0181170:intron 55.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 69345637 69347954 69345637 ID=Msa0181170;Name=Msa0181170
chr1_4 mRNA 69345637 69347954 69345637 ID=Msa0181170-mRNA-1;Parent=Msa0181170;Name=Msa0181170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=87|1|1|1|1|1|3|140|270
chr1_4 exon 69345637 69345859 69345637 ID=Msa0181170-mRNA-1:exon:23004;Parent=Msa0181170-mRNA-1
chr1_4 exon 69346228 69346357 69346228 ID=Msa0181170-mRNA-1:exon:23005;Parent=Msa0181170-mRNA-1
chr1_4 exon 69347268 69347954 69347268 ID=Msa0181170-mRNA-1:exon:23006;Parent=Msa0181170-mRNA-1
chr1_4 five_prime_UTR 69345637 69345723 69345637 ID=Msa0181170-mRNA-1:five_prime_utr;Parent=Msa0181170-mRNA-1
chr1_4 CDS 69345724 69345859 69345724 ID=Msa0181170-mRNA-1:cds;Parent=Msa0181170-mRNA-1
chr1_4 CDS 69346228 69346357 69346228 ID=Msa0181170-mRNA-1:cds;Parent=Msa0181170-mRNA-1
chr1_4 CDS 69347268 69347814 69347268 ID=Msa0181170-mRNA-1:cds;Parent=Msa0181170-mRNA-1
chr1_4 three_prime_UTR 69347815 69347954 69347815 ID=Msa0181170-mRNA-1:three_prime_utr;Parent=Msa0181170-mRNA-1
Gene Sequence

>Msa0181170

ATGGGGTTCCAGCCACTAGAAAAGACAAAACCAAAACATAGAAAAGGTTTATGGTCACCTGAAGAAGATCACAAACTCAGAAACTACATCCTTAAACATGGTCATGGTTGTTGGAGCTCTGTCCCAATTAAGGCAGGCTTGCAAAGGAATGGAAAAAGCTGCAGACTAAGGTGGATTAACTATCTAAGGCCAGGATTAAAGAGAGGAAAGTTCAGCAAACAGGAGGAGGAAACAATCCTCACCCTTCATCACATGTTAGGCAACAAGTGGTCACAGATAGCACAACATTTGCCAGGAAGGACAGACAATGAGATAAAAAACTATTGGCATTCATATTTGAAAAAGAGAGTGGCCAAAGCTATGGAAATGGAATCACACAAACAATTTCAATATGCTAGCTCAAGCTCAGATACAATGAACTCTTCACCCTCTCTTCAAAAACTTGCAACACAAGATCCACACAATTATAACAACATCACCAAAGAGACACATCAAAGCACCTTACCAAAACTATTGTTTGCTGAATGGCTTTCATTGGATCATGTTAATAGTAGGAACTCAACAAATTCAGTTGAATCTTTGGTCATGAGAAATGGATTTGATCAAAATTCAGCTTTTCAAGAAGCTACAATGCAAGAGGGACCATTCAATGGAGAGTTTCATAATAGTGTGACCAACATTTCAGCCACTGAGATGTTCAATTCACAGCTTAAATTTGCAAATCAAATTGTGGGAAATAGGTTTGTCCATTGCATGCCTGGAGTTGATTTAAGTAACAATTTCAATCTAAGCAATGATGCAATGTACGTTTGA
Protein sequence

>Msa0181170

MGFQPLEKTKPKHRKGLWSPEEDHKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGKFSKQEEETILTLHHMLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKRVAKAMEMESHKQFQYASSSSDTMNSSPSLQKLATQDPHNYNNITKETHQSTLPKLLFAEWLSLDHVNSRNSTNSVESLVMRNGFDQNSAFQEATMQEGPFNGEFHNSVTNISATEMFNSQLKFANQIVGNRFVHCMPGVDLSNNFNLSNDAMYV*