AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0181190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181190 MtrunA17_Chr1g0203411 92.459 305 12 2 1 304 1 295 0.0 578
Msa0181190 MtrunA17_Chr8g0349261 46.395 319 118 10 1 289 1 296 9.54e-87 261
Msa0181190 MtrunA17_Chr7g0217741 59.459 185 63 3 1 174 1 184 1.75e-71 223
Msa0181190 MtrunA17_Chr6g0453471 61.988 171 57 3 1 163 1 171 3.24e-69 219
Msa0181190 MtrunA17_Chr7g0247131 49.451 273 96 9 44 292 10 264 2.47e-68 214
Msa0181190 MtrunA17_Chr4g0042671 60.694 173 58 2 1 164 1 172 8.36e-68 216
Msa0181190 MtrunA17_Chr1g0187761 50.711 211 102 1 1 209 1 211 2.21e-66 208
Msa0181190 MtrunA17_Chr1g0167691 77.586 116 26 0 1 116 1 116 5.51e-66 207
Msa0181190 MtrunA17_Chr4g0039971 74.576 118 30 0 1 118 2 119 3.63e-64 206
Msa0181190 MtrunA17_Chr1g0167661 75.000 116 29 0 1 116 1 116 3.86e-63 200
Msa0181190 MtrunA17_Chr2g0281071 73.504 117 30 1 1 116 1 117 9.11e-63 202
Msa0181190 MtrunA17_Chr4g0048511 73.504 117 30 1 1 116 1 117 1.56e-62 201
Msa0181190 MtrunA17_Chr3g0115821 70.339 118 35 0 1 118 1 118 7.95e-62 199
Msa0181190 MtrunA17_Chr7g0261281 69.672 122 37 0 1 122 1 122 5.83e-61 195
Msa0181190 MtrunA17_Chr2g0323411 70.588 119 35 0 1 119 1 119 6.96e-61 196
Msa0181190 MtrunA17_Chr7g0274581 66.387 119 40 0 1 119 1 119 2.46e-60 191
Msa0181190 MtrunA17_Chr5g0410961 71.552 116 33 0 1 116 1 116 3.54e-60 195
Msa0181190 MtrunA17_Chr4g0068061 69.828 116 35 0 1 116 1 116 2.66e-59 192
Msa0181190 MtrunA17_Chr3g0131121 68.966 116 36 0 1 116 1 116 1.11e-58 190
Msa0181190 MtrunA17_Chr1g0193371 68.908 119 37 0 1 119 1 119 1.12e-58 192
Msa0181190 MtrunA17_Chr4g0060721 66.949 118 39 0 1 118 2 119 2.55e-58 190
Msa0181190 MtrunA17_Chr7g0217221 68.067 119 38 0 1 119 1 119 3.54e-58 187
Msa0181190 MtrunA17_Chr4g0037141 67.241 116 38 0 1 116 1 116 7.25e-58 187
Msa0181190 MtrunA17_Chr5g0395281 68.644 118 37 0 1 118 1 118 9.51e-58 187
Msa0181190 MtrunA17_Chr4g0070611 67.521 117 38 0 1 117 1 117 3.71e-57 186
Msa0181190 MtrunA17_Chr3g0092401 66.949 118 39 0 1 118 2 119 4.51e-57 186
Msa0181190 MtrunA17_Chr7g0254411 68.644 118 37 0 1 118 1 118 4.98e-57 187
Msa0181190 MtrunA17_Chr8g0385321 67.241 116 38 0 1 116 1 116 8.43e-57 186
Msa0181190 MtrunA17_Chr4g0070641 67.521 117 38 0 1 117 1 117 9.35e-57 181
Msa0181190 MtrunA17_Chr7g0275911 65.812 117 40 0 1 117 1 117 1.09e-56 183
Msa0181190 MtrunA17_Chr1g0193801 66.949 118 39 0 1 118 1 118 1.32e-56 187
Msa0181190 MtrunA17_Chr7g0270891 53.448 174 73 2 1 172 1 168 2.83e-56 186
Msa0181190 MtrunA17_Chr8g0346561 64.706 119 42 0 1 119 1 119 5.56e-56 183
Msa0181190 MtrunA17_Chr6g0453211 69.369 111 34 0 1 111 1 111 2.60e-55 182
Msa0181190 MtrunA17_Chr7g0228891 56.081 148 56 1 1 139 1 148 3.87e-55 180
Msa0181190 MtrunA17_Chr3g0121241 68.750 112 35 0 5 116 35 146 1.73e-54 179
Msa0181190 MtrunA17_Chr3g0103281 65.517 116 40 0 1 116 1 116 5.73e-54 178
Msa0181190 MtrunA17_Chr8g0387421 64.407 118 42 0 1 118 1 118 7.95e-54 178
Msa0181190 MtrunA17_Chr1g0194951 65.517 116 40 0 1 116 1 116 8.21e-54 179
Msa0181190 MtrunA17_Chr5g0435101 62.281 114 43 0 3 116 2 115 8.56e-54 174
Msa0181190 MtrunA17_Chr7g0271241 68.807 109 34 0 1 109 1 109 8.83e-54 179
Msa0181190 MtrunA17_Chr2g0323351 64.655 116 41 0 1 116 1 116 2.03e-53 175
Msa0181190 MtrunA17_Chr2g0330041 64.655 116 41 0 1 116 1 116 2.06e-53 179
Msa0181190 MtrunA17_Chr1g0151941 54.110 146 62 2 1 145 1 142 2.27e-53 175
Msa0181190 MtrunA17_Chr8g0342541 63.793 116 42 0 1 116 1 116 3.87e-53 177
Msa0181190 MtrunA17_Chr2g0311221 68.182 110 35 0 2 111 4 113 4.56e-53 176
Msa0181190 MtrunA17_Chr8g0342521 63.793 116 42 0 1 116 1 116 1.31e-52 176
Msa0181190 MtrunA17_Chr4g0022931 64.103 117 41 1 1 116 1 117 1.85e-52 173
Msa0181190 MtrunA17_Chr2g0309911 65.766 111 38 0 6 116 5 115 1.93e-52 174
Msa0181190 MtrunA17_Chr3g0110351 61.864 118 45 0 1 118 1 118 3.12e-52 174
Msa0181190 MtrunA17_Chr4g0028311 65.812 117 39 1 1 116 1 117 4.73e-52 173
Msa0181190 MtrunA17_Chr4g0058631 63.793 116 42 0 1 116 1 116 5.83e-52 174
Msa0181190 MtrunA17_Chr5g0434571 61.864 118 45 0 1 118 37 154 5.98e-52 174
Msa0181190 MtrunA17_Chr4g0022891 53.642 151 57 3 1 144 1 145 1.06e-51 170
Msa0181190 MtrunA17_Chr7g0269831 68.103 116 37 0 1 116 1 116 1.08e-51 173
Msa0181190 MtrunA17_Chr2g0327351 61.538 130 49 1 1 129 1 130 2.28e-51 172
Msa0181190 MtrunA17_Chr5g0397231 67.273 110 36 0 1 110 1 110 4.65e-51 171
Msa0181190 MtrunA17_Chr4g0057031 63.793 116 42 0 1 116 1 116 4.69e-51 169
Msa0181190 MtrunA17_Chr5g0417821 51.250 160 73 2 11 169 6 161 6.05e-51 169
Msa0181190 MtrunA17_Chr3g0135311 63.248 117 42 1 1 116 1 117 8.69e-51 171
Msa0181190 MtrunA17_Chr4g0022901 62.393 117 43 1 1 116 1 117 1.11e-50 168
Msa0181190 MtrunA17_Chr3g0117091 62.712 118 44 0 1 118 1 118 1.19e-50 171
Msa0181190 MtrunA17_Chr7g0264641 60.684 117 45 1 1 116 1 117 5.42e-50 167
Msa0181190 MtrunA17_Chr4g0022911 59.829 117 46 1 1 116 1 117 7.42e-50 167
Msa0181190 MtrunA17_Chr6g0452271 61.207 116 45 0 1 116 1 116 9.30e-50 168
Msa0181190 MtrunA17_Chr4g0044421 61.207 116 45 0 1 116 1 116 1.00e-49 163
Msa0181190 MtrunA17_Chr1g0211161 63.063 111 41 0 6 116 7 117 2.99e-49 163
Msa0181190 MtrunA17_Chr1g0152011 61.538 117 44 1 1 116 1 117 3.05e-49 167
Msa0181190 MtrunA17_Chr4g0022881 60.526 114 45 0 1 114 1 114 4.29e-49 163
Msa0181190 MtrunA17_Chr5g0400821 61.538 117 44 1 1 116 1 117 4.69e-49 165
Msa0181190 MtrunA17_Chr1g0203441 64.815 108 38 0 13 120 14 121 7.98e-49 164
Msa0181190 MtrunA17_Chr8g0342481 60.684 117 45 1 1 116 1 117 2.89e-48 166
Msa0181190 MtrunA17_Chr4g0054391 64.545 110 38 1 1 109 1 110 1.03e-47 161
Msa0181190 MtrunA17_Chr2g0328771 60.377 106 42 0 12 117 20 125 1.64e-46 159
Msa0181190 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 1.67e-46 160
Msa0181190 MtrunA17_Chr6g0470971 60.714 112 44 0 4 115 6 117 1.76e-46 158
Msa0181190 MtrunA17_Chr4g0032401 60.748 107 42 0 12 118 17 123 6.34e-46 158
Msa0181190 MtrunA17_Chr3g0080861 64.220 109 39 0 12 120 37 145 1.19e-45 161
Msa0181190 MtrunA17_Chr6g0487491 58.065 124 43 2 1 115 1 124 1.77e-45 154
Msa0181190 MtrunA17_Chr3g0099131 61.468 109 42 0 12 120 41 149 2.89e-45 160
Msa0181190 MtrunA17_Chr3g0088461 61.468 109 42 0 9 117 19 127 3.23e-45 156
Msa0181190 MtrunA17_Chr2g0322521 64.545 110 39 0 11 120 28 137 5.29e-45 157
Msa0181190 MtrunA17_Chr4g0055981 62.037 108 41 0 9 116 52 159 8.92e-45 152
Msa0181190 MtrunA17_Chr8g0354661 59.829 117 47 0 12 128 37 153 1.42e-44 159
Msa0181190 MtrunA17_Chr7g0228231 60.185 108 43 0 12 119 14 121 6.08e-44 149
Msa0181190 MtrunA17_Chr8g0343831 59.813 107 43 0 12 118 8 114 1.13e-43 150
Msa0181190 MtrunA17_Chr6g0450101 55.833 120 51 1 1 118 1 120 2.55e-43 147
Msa0181190 MtrunA17_Chr1g0209661 58.559 111 46 0 8 118 23 133 4.84e-43 150
Msa0181190 MtrunA17_Chr7g0220341 62.037 108 39 1 11 116 24 131 3.02e-42 147
Msa0181190 MtrunA17_Chr1g0168661 54.783 115 52 0 6 120 15 129 5.33e-42 145
Msa0181190 MtrunA17_Chr1g0186061 59.223 103 42 0 13 115 21 123 7.00e-42 145
Msa0181190 MtrunA17_Chr1g0194291 60.185 108 43 0 11 118 20 127 7.20e-42 145
Msa0181190 MtrunA17_Chr5g0434831 59.434 106 43 0 11 116 6 111 9.17e-42 143
Msa0181190 MtrunA17_Chr5g0434911 56.364 110 48 0 7 116 16 125 2.89e-41 144
Msa0181190 MtrunA17_Chr4g0042611 69.318 88 27 0 1 88 1 88 3.03e-41 138
Msa0181190 MtrunA17_Chr1g0180391 56.522 115 48 1 10 122 15 129 9.80e-41 141
Msa0181190 MtrunA17_Chr5g0434931 58.491 106 44 0 11 116 34 139 1.19e-40 142
Msa0181190 MtrunA17_Chr1g0194301 56.075 107 47 0 12 118 33 139 1.68e-40 142
Msa0181190 MtrunA17_Chr1g0154031 58.716 109 45 0 12 120 76 184 1.86e-40 145
Msa0181190 MtrunA17_Chr2g0294811 65.217 92 32 0 1 92 1 92 4.26e-40 136
Msa0181190 MtrunA17_Chr7g0240821 59.406 101 41 0 16 116 5 105 2.06e-39 138
Msa0181190 MtrunA17_Chr7g0228991 58.491 106 44 0 11 116 28 133 4.83e-39 138
Msa0181190 MtrunA17_Chr5g0434841 56.604 106 46 0 11 116 19 124 2.58e-38 137
Msa0181190 MtrunA17_Chr8g0360111 57.843 102 43 0 11 112 24 125 3.34e-38 135
Msa0181190 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 1.36e-37 129
Msa0181190 MtrunA17_Chr2g0293911 58.879 107 44 0 12 118 24 130 2.37e-37 135
Msa0181190 MtrunA17_Chr4g0068921 57.944 107 45 0 12 118 24 130 9.82e-37 130
Msa0181190 MtrunA17_Chr1g0192411 51.376 109 53 0 12 120 12 120 1.57e-36 135
Msa0181190 MtrunA17_Chr8g0342531 61.798 89 34 0 1 89 1 89 1.59e-36 128
Msa0181190 MtrunA17_Chr2g0327821 52.830 106 50 0 12 117 6 111 2.19e-36 130
Msa0181190 MtrunA17_Chr5g0440781 43.200 125 70 1 12 135 12 136 6.99e-35 125
Msa0181190 MtrunA17_Chr8g0342461 60.000 90 35 1 1 89 1 90 3.05e-34 122
Msa0181190 MtrunA17_Chr5g0440761 43.200 125 70 1 12 135 12 136 3.17e-34 125
Msa0181190 MtrunA17_Chr5g0441141 43.200 125 70 1 12 135 12 136 3.87e-34 125
Msa0181190 MtrunA17_Chr8g0342471 60.000 90 35 1 1 89 1 90 7.54e-34 120
Msa0181190 MtrunA17_Chr5g0441131 50.000 104 51 1 12 114 9 112 1.26e-33 121
Msa0181190 MtrunA17_Chr5g0395221 61.364 88 34 0 1 88 1 88 1.78e-33 118
Msa0181190 MtrunA17_Chr2g0323321 54.348 92 41 1 1 92 1 91 1.86e-32 116
Msa0181190 MtrunA17_Chr4g0030881 48.673 113 51 1 13 118 8 120 1.91e-32 120
Msa0181190 MtrunA17_Chr4g0013361 46.847 111 58 1 8 117 6 116 1.48e-31 119
Msa0181190 MtrunA17_Chr3g0099141 56.627 83 36 0 12 94 40 122 2.11e-31 114
Msa0181190 MtrunA17_Chr8g0334881 48.598 107 54 1 12 117 10 116 4.27e-31 118
Msa0181190 MtrunA17_Chr6g0454921 45.385 130 68 2 14 143 15 141 1.34e-30 114
Msa0181190 MtrunA17_Chr5g0401731 52.941 102 47 1 14 115 15 115 5.35e-30 115
Msa0181190 MtrunA17_Chr4g0008551 51.456 103 47 2 14 115 38 138 9.88e-29 112
Msa0181190 MtrunA17_Chr4g0053431 47.222 108 56 1 14 121 5 111 1.66e-28 110
Msa0181190 MtrunA17_Chr3g0139671 47.222 108 56 1 14 121 85 191 2.17e-28 115
Msa0181190 MtrunA17_Chr3g0139671 30.189 106 72 2 14 118 33 137 8.59e-11 62.8
Msa0181190 MtrunA17_Chr3g0133601 47.573 103 53 1 14 116 37 138 6.26e-27 105
Msa0181190 MtrunA17_Chr1g0157731 43.519 108 60 1 14 121 91 197 1.28e-26 110
Msa0181190 MtrunA17_Chr1g0157731 30.189 106 72 2 14 118 39 143 5.05e-11 63.5
Msa0181190 MtrunA17_Chr7g0229131 60.274 73 29 0 44 116 4 76 2.39e-26 102
Msa0181190 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 4 73 3.01e-26 103
Msa0181190 MtrunA17_Chr6g0480581 46.667 105 54 2 14 118 4 106 9.63e-26 102
Msa0181190 MtrunA17_Chr7g0238631 47.573 103 53 1 14 116 113 214 3.64e-25 105
Msa0181190 MtrunA17_Chr7g0238631 31.132 106 71 2 14 118 61 165 4.39e-11 63.5
Msa0181190 MtrunA17_Chr5g0434901 63.636 66 24 0 48 113 9 74 4.61e-25 97.1
Msa0181190 MtrunA17_Chr5g0417621 36.747 166 84 4 14 178 134 279 7.07e-25 103
Msa0181190 MtrunA17_Chr4g0042501 33.908 174 97 3 14 186 105 261 9.62e-25 103
Msa0181190 MtrunA17_Chr5g0429661 48.454 97 47 2 14 109 122 216 1.07e-24 102
Msa0181190 MtrunA17_Chr5g0425591 45.882 85 45 1 12 95 9 93 3.64e-24 94.0
Msa0181190 MtrunA17_Chr5g0437321 46.465 99 52 1 14 112 19 116 5.91e-24 99.0
Msa0181190 MtrunA17_Chr4g0058991 43.103 116 62 3 12 125 207 320 1.52e-23 100
Msa0181190 MtrunA17_Chr3g0117511 41.593 113 64 2 14 125 183 294 3.66e-23 99.0
Msa0181190 MtrunA17_Chr5g0397841 45.000 100 54 1 10 109 106 204 5.73e-23 98.6
Msa0181190 MtrunA17_Chr6g0460661 41.121 107 62 1 14 120 16 121 7.58e-23 92.8
Msa0181190 MtrunA17_Chr7g0254261 43.810 105 58 1 14 118 89 192 1.71e-22 95.9
Msa0181190 MtrunA17_Chr3g0125801 45.283 106 55 2 14 118 16 119 4.47e-22 93.6
Msa0181190 MtrunA17_Chr7g0228531 44.444 99 53 2 12 110 218 314 6.83e-22 95.1
Msa0181190 MtrunA17_Chr3g0093811 54.667 75 34 0 44 118 14 88 9.06e-22 92.4
Msa0181190 MtrunA17_Chr7g0238651 41.818 110 62 1 14 121 7 116 1.38e-21 93.6
Msa0181190 MtrunA17_Chr6g0453751 44.681 94 43 2 11 95 19 112 3.86e-21 87.0
Msa0181190 MtrunA17_Chr6g0460671 39.252 107 64 1 14 120 99 204 1.08e-20 90.9
Msa0181190 MtrunA17_Chr7g0228401 46.512 86 45 1 25 110 290 374 3.73e-19 87.4
Msa0181190 MtrunA17_Chr1g0177901 45.349 86 46 1 25 110 5 89 2.34e-18 82.0
Msa0181190 MtrunA17_Chr7g0228481 38.384 99 59 2 12 110 218 314 1.42e-17 82.4
Msa0181190 MtrunA17_Chr7g0247141 60.417 48 18 1 1 47 1 48 1.22e-16 72.8
Msa0181190 MtrunA17_Chr5g0416341 32.117 137 83 3 8 144 23 149 1.79e-16 79.3
Msa0181190 MtrunA17_Chr7g0233061 36.522 115 57 4 14 122 180 284 3.04e-16 78.2
Msa0181190 MtrunA17_Chr8g0362231 36.283 113 68 2 8 120 19 127 3.75e-16 78.6
Msa0181190 MtrunA17_Chr4g0042621 50.588 85 32 2 89 164 15 98 1.12e-15 76.3
Msa0181190 MtrunA17_Chr1g0193901 42.529 87 48 2 12 96 11 97 1.48e-14 68.9
Msa0181190 MtrunA17_Chr1g0193891 42.529 87 48 2 12 96 11 97 1.48e-14 68.9
Msa0181190 MtrunA17_Chr1g0193871 42.529 87 48 2 12 96 11 97 1.48e-14 68.9
Msa0181190 MtrunA17_Chr1g0193881 42.529 87 48 2 12 96 11 97 1.48e-14 68.9
Msa0181190 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 1.08e-13 65.1
Msa0181190 MtrunA17_Chr3g0104491 38.961 77 42 2 53 125 1 76 2.46e-11 63.2
Msa0181190 MtrunA17_Chr5g0434891 65.789 38 13 0 78 115 2 39 2.68e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181190 AT3G61250.1 51.495 301 110 8 1 289 1 277 2.12e-90 271
Msa0181190 AT3G01140.2 62.941 170 57 1 1 164 1 170 1.81e-72 227
Msa0181190 AT5G15310.4 61.404 171 60 1 1 165 1 171 1.44e-70 219
Msa0181190 AT5G15310.2 61.404 171 60 1 1 165 1 171 1.60e-70 221
Msa0181190 AT5G15310.1 61.404 171 60 1 1 165 1 171 1.90e-70 221
Msa0181190 AT3G01140.1 62.353 170 58 1 1 164 44 213 6.92e-70 222
Msa0181190 AT2G31180.1 75.833 120 29 0 1 120 1 120 2.01e-66 208
Msa0181190 AT4G05100.1 74.359 117 29 1 1 116 1 117 1.70e-64 206
Msa0181190 AT4G21440.1 73.276 116 31 0 1 116 1 116 7.25e-64 205
Msa0181190 AT3G23250.1 75.000 116 29 0 1 116 1 116 8.31e-64 203
Msa0181190 AT4G28110.1 71.429 119 34 0 1 119 1 119 2.36e-63 202
Msa0181190 AT5G16770.4 71.186 118 34 0 1 118 1 118 4.12e-63 202
Msa0181190 AT5G16770.3 71.186 118 34 0 1 118 1 118 4.12e-63 202
Msa0181190 AT5G16770.1 71.186 118 34 0 1 118 1 118 9.29e-63 202
Msa0181190 AT5G16770.2 71.186 118 34 0 1 118 1 118 9.29e-63 202
Msa0181190 AT3G02940.2 70.339 118 35 0 1 118 1 118 1.23e-62 201
Msa0181190 AT3G02940.1 70.339 118 35 0 1 118 1 118 2.37e-62 200
Msa0181190 AT3G02940.3 70.339 118 35 0 1 118 1 118 2.37e-62 200
Msa0181190 AT1G34670.1 70.339 118 35 0 1 118 1 118 4.36e-61 198
Msa0181190 AT1G06180.1 72.269 119 33 0 1 119 1 119 9.31e-61 194
Msa0181190 AT1G79180.1 70.000 120 36 0 2 121 4 123 5.10e-60 193
Msa0181190 AT1G35515.1 49.724 181 86 2 1 180 1 177 7.36e-60 190
Msa0181190 AT5G62470.2 70.339 118 35 0 1 118 1 118 7.72e-60 195
Msa0181190 AT4G09460.1 68.966 116 36 0 1 116 1 116 1.02e-59 191
Msa0181190 AT2G16720.1 68.966 116 36 0 1 116 1 116 2.11e-59 191
Msa0181190 AT5G60890.1 68.644 118 37 0 1 118 1 118 3.65e-59 191
Msa0181190 AT5G10280.1 67.797 118 38 0 1 118 1 118 7.92e-59 192
Msa0181190 AT5G62470.1 70.339 118 34 1 1 118 1 117 1.84e-58 191
Msa0181190 AT3G47600.1 68.644 118 37 0 1 118 1 118 1.92e-58 191
Msa0181190 AT4G38620.1 68.966 116 36 0 1 116 1 116 1.97e-58 189
Msa0181190 AT1G22640.1 68.103 116 37 0 1 116 1 116 2.17e-58 188
Msa0181190 AT1G74650.1 70.690 116 34 0 1 116 1 116 5.70e-58 189
Msa0181190 AT1G08810.1 50.820 183 83 3 1 179 1 180 7.29e-58 187
Msa0181190 AT5G49330.1 59.441 143 55 1 1 140 1 143 2.30e-57 188
Msa0181190 AT5G65230.1 66.949 118 39 0 1 118 1 118 3.18e-57 187
Msa0181190 AT4G17785.2 65.546 119 40 1 1 118 1 119 3.98e-57 187
Msa0181190 AT4G17785.1 65.546 119 40 1 1 118 1 119 5.96e-57 187
Msa0181190 AT1G56160.1 68.696 115 36 0 2 116 4 118 7.57e-57 185
Msa0181190 AT1G16490.1 67.826 115 37 0 2 116 4 118 1.17e-56 184
Msa0181190 AT1G18570.1 69.231 117 35 1 1 116 1 117 1.49e-56 186
Msa0181190 AT3G28910.1 65.323 124 43 0 1 124 1 124 1.63e-56 185
Msa0181190 AT3G13540.1 41.803 244 91 6 4 207 15 247 1.64e-56 183
Msa0181190 AT3G13890.2 66.379 116 39 0 1 116 1 116 3.07e-56 186
Msa0181190 AT4G34990.1 66.379 116 39 0 1 116 1 116 3.23e-56 183
Msa0181190 AT4G01680.3 66.667 117 39 0 1 117 1 117 9.21e-56 181
Msa0181190 AT5G54230.1 71.552 116 33 0 1 116 1 116 1.20e-55 183
Msa0181190 AT3G62610.1 68.103 116 37 0 1 116 1 116 1.81e-55 183
Msa0181190 AT5G26660.1 64.407 118 42 0 1 118 1 118 3.08e-55 183
Msa0181190 AT4G01680.1 66.667 117 39 0 1 117 1 117 5.74e-55 182
Msa0181190 AT3G12820.1 69.298 114 35 0 3 116 5 118 1.08e-54 178
Msa0181190 AT2G47460.1 67.241 116 38 0 1 116 1 116 2.04e-54 181
Msa0181190 AT5G61420.2 64.407 118 42 0 1 118 1 118 3.71e-54 181
Msa0181190 AT1G57560.1 63.793 116 42 0 1 116 1 116 4.86e-54 179
Msa0181190 AT5G16600.1 64.407 118 42 0 1 118 1 118 4.93e-54 179
Msa0181190 AT1G57560.2 62.712 118 44 0 1 118 1 118 5.57e-54 177
Msa0181190 AT1G09540.1 62.712 118 44 0 1 118 1 118 1.62e-53 179
Msa0181190 AT5G56110.1 65.517 116 40 0 1 116 1 116 2.35e-53 177
Msa0181190 AT1G79180.2 54.902 153 36 1 2 121 4 156 3.11e-53 177
Msa0181190 AT1G63910.1 64.407 118 42 0 1 118 1 118 3.50e-53 178
Msa0181190 AT3G13890.1 61.600 125 39 1 1 116 1 125 4.15e-53 178
Msa0181190 AT5G07690.1 65.789 114 39 0 1 114 1 114 4.52e-53 177
Msa0181190 AT1G74080.1 64.912 114 40 0 1 114 1 114 4.96e-53 177
Msa0181190 AT3G12720.1 66.667 111 37 0 6 116 16 126 1.00e-52 175
Msa0181190 AT4G12350.1 64.655 116 41 0 1 116 1 116 1.29e-52 174
Msa0181190 AT4G22680.1 63.793 116 42 0 1 116 1 116 2.68e-52 172
Msa0181190 AT5G07700.1 64.655 116 41 0 1 116 1 116 3.86e-52 174
Msa0181190 AT5G07700.2 64.655 116 41 0 1 116 1 116 3.86e-52 174
Msa0181190 AT1G66230.1 61.017 118 46 0 1 118 1 118 4.15e-52 172
Msa0181190 AT4G01680.2 60.465 129 39 1 1 117 1 129 1.95e-51 173
Msa0181190 AT1G74430.1 65.517 116 40 0 1 116 1 116 2.00e-51 171
Msa0181190 AT5G14340.1 61.864 118 45 0 1 118 13 130 8.82e-51 169
Msa0181190 AT5G57620.1 63.248 117 42 1 1 116 1 117 9.01e-51 171
Msa0181190 AT5G23000.1 63.248 117 42 1 1 116 1 117 4.21e-50 169
Msa0181190 AT4G37780.1 58.537 123 50 1 1 122 1 123 2.00e-49 166
Msa0181190 AT5G65790.1 62.393 117 43 1 1 116 1 117 2.35e-49 168
Msa0181190 AT2G36890.1 61.475 122 46 1 1 121 1 122 3.00e-49 166
Msa0181190 AT2G36890.2 61.475 122 46 1 1 121 42 163 3.68e-49 167
Msa0181190 AT3G49690.1 62.393 117 43 1 1 116 1 117 6.09e-49 165
Msa0181190 AT5G06100.1 56.349 126 51 1 10 135 30 151 7.72e-49 169
Msa0181190 AT1G18710.1 62.931 116 43 0 1 116 1 116 7.92e-49 164
Msa0181190 AT5G06100.5 56.349 126 51 1 10 135 30 151 3.86e-48 168
Msa0181190 AT5G06100.2 56.349 126 51 1 10 135 30 151 3.86e-48 168
Msa0181190 AT5G06100.3 56.349 126 51 1 10 135 30 151 3.86e-48 168
Msa0181190 AT5G06100.4 56.349 126 51 1 10 135 30 151 3.86e-48 168
Msa0181190 AT5G62320.1 58.197 122 44 1 2 116 3 124 2.05e-47 159
Msa0181190 AT5G35550.1 66.667 105 35 0 12 116 14 118 3.22e-47 159
Msa0181190 AT2G32460.1 62.832 113 42 0 8 120 14 126 5.61e-47 165
Msa0181190 AT2G32460.2 63.636 110 40 0 11 120 5 114 1.30e-46 163
Msa0181190 AT5G55020.1 61.017 118 46 0 12 129 26 143 1.52e-46 164
Msa0181190 AT5G40330.1 58.716 109 45 0 8 116 8 116 3.63e-46 155
Msa0181190 AT5G14750.1 61.538 104 40 0 13 116 17 120 5.80e-46 154
Msa0181190 AT5G12870.1 60.748 107 42 0 12 118 18 124 3.89e-45 154
Msa0181190 AT3G08500.1 60.550 109 43 0 9 117 27 135 5.69e-45 156
Msa0181190 AT3G28470.1 58.182 110 46 0 1 110 1 110 1.14e-44 154
Msa0181190 AT3G48920.1 60.185 108 43 0 9 116 15 122 2.12e-44 152
Msa0181190 AT3G11440.2 58.716 109 45 0 12 120 41 149 2.26e-44 157
Msa0181190 AT4G26930.1 62.385 109 41 0 12 120 19 127 3.98e-44 155
Msa0181190 AT3G27920.1 56.881 109 47 0 8 116 10 118 9.88e-44 149
Msa0181190 AT3G11440.3 55.462 119 53 0 12 130 41 159 1.13e-43 157
Msa0181190 AT3G11440.4 55.462 119 53 0 12 130 41 159 1.13e-43 157
Msa0181190 AT3G11440.1 55.462 119 53 0 12 130 41 159 1.13e-43 157
Msa0181190 AT3G27810.1 51.128 133 58 1 12 137 20 152 3.13e-43 148
Msa0181190 AT4G25560.1 59.130 115 45 1 1 115 1 113 3.73e-43 149
Msa0181190 AT5G52600.1 61.538 104 40 0 12 115 12 115 6.51e-43 146
Msa0181190 AT3G30210.1 59.633 109 44 0 11 119 26 134 8.30e-43 148
Msa0181190 AT3G24310.1 60.748 107 42 0 11 117 17 123 9.94e-43 148
Msa0181190 AT5G52260.1 60.870 115 45 0 1 115 1 115 1.11e-42 148
Msa0181190 AT5G40350.1 59.259 108 44 0 12 119 17 124 1.13e-42 146
Msa0181190 AT3G01530.1 53.659 123 53 1 8 126 21 143 2.20e-42 145
Msa0181190 AT2G26960.1 56.250 112 49 0 9 120 17 128 1.11e-41 149
Msa0181190 AT4G13480.1 58.879 107 44 0 13 119 7 113 2.65e-41 144
Msa0181190 AT1G48000.1 57.547 106 45 0 12 117 32 137 2.51e-39 138
Msa0181190 AT1G66370.1 53.043 115 50 1 1 115 1 111 3.09e-39 138
Msa0181190 AT2G47190.1 52.727 110 52 0 8 117 16 125 1.75e-38 137
Msa0181190 AT1G25340.1 55.660 106 47 0 13 118 19 124 2.29e-38 137
Msa0181190 AT1G68320.1 57.009 107 46 0 12 118 19 125 2.43e-38 137
Msa0181190 AT3G46130.1 52.252 111 53 0 8 118 5 115 4.08e-38 135
Msa0181190 AT5G59780.3 53.774 106 49 0 13 118 9 114 2.09e-37 133
Msa0181190 AT1G66380.1 58.095 105 44 0 11 115 7 111 5.63e-37 129
Msa0181190 AT3G53200.1 57.692 104 44 0 12 115 9 112 1.16e-36 131
Msa0181190 AT1G56650.1 58.095 105 44 0 11 115 7 111 2.31e-36 131
Msa0181190 AT5G49620.1 45.455 165 80 2 8 172 22 176 3.55e-36 132
Msa0181190 AT1G66390.1 58.095 105 44 0 11 115 7 111 9.39e-36 129
Msa0181190 AT3G06490.1 57.944 107 45 0 12 118 19 125 1.17e-35 131
Msa0181190 AT3G12820.2 75.714 70 17 0 47 116 1 70 3.61e-34 123
Msa0181190 AT1G25340.2 52.830 106 45 1 13 118 19 119 4.18e-34 125
Msa0181190 AT1G25340.3 52.830 106 45 1 13 118 19 119 6.04e-34 126
Msa0181190 AT2G26950.1 48.624 109 53 1 9 117 13 118 1.05e-33 127
Msa0181190 AT5G26660.2 71.622 74 21 0 45 118 14 87 1.26e-33 125
Msa0181190 AT3G47600.2 72.973 74 20 0 45 118 39 112 2.21e-33 125
Msa0181190 AT5G14750.3 65.385 78 24 1 39 116 12 86 8.96e-33 119
Msa0181190 AT5G49620.2 41.899 179 80 3 8 172 22 190 1.37e-32 123
Msa0181190 AT3G60460.1 45.536 112 60 1 7 117 6 117 6.15e-32 120
Msa0181190 AT5G35550.2 70.833 72 21 0 45 116 50 121 1.03e-31 119
Msa0181190 AT3G46130.3 60.494 81 32 0 38 118 3 83 4.75e-30 114
Msa0181190 AT3G27810.2 50.000 102 44 1 43 137 2 103 4.82e-30 112
Msa0181190 AT5G59780.2 63.514 74 27 0 45 118 20 93 1.52e-29 112
Msa0181190 AT3G46130.4 63.514 74 27 0 45 118 20 93 1.62e-29 112
Msa0181190 AT5G40350.2 62.667 75 28 0 45 119 5 79 5.72e-29 109
Msa0181190 AT3G53200.2 66.197 71 24 0 45 115 9 79 1.30e-28 109
Msa0181190 AT5G02320.1 48.544 103 52 1 14 116 127 228 1.65e-27 112
Msa0181190 AT5G02320.1 33.019 106 69 2 14 118 75 179 1.21e-12 68.6
Msa0181190 AT5G02320.2 48.544 103 52 1 14 116 127 228 1.65e-27 112
Msa0181190 AT5G02320.2 33.019 106 69 2 14 118 75 179 1.21e-12 68.6
Msa0181190 AT5G02320.3 48.544 103 52 1 14 116 67 168 1.69e-27 112
Msa0181190 AT5G02320.3 33.019 106 69 2 14 118 15 119 1.53e-12 68.2
Msa0181190 AT4G32730.5 45.631 103 55 1 14 116 87 188 6.33e-27 111
Msa0181190 AT4G32730.5 30.841 107 72 2 14 119 35 140 1.29e-11 65.9
Msa0181190 AT4G32730.4 45.631 103 55 1 14 116 87 188 6.33e-27 111
Msa0181190 AT4G32730.4 30.841 107 72 2 14 119 35 140 1.29e-11 65.9
Msa0181190 AT4G32730.3 45.631 103 55 1 14 116 87 188 6.33e-27 111
Msa0181190 AT4G32730.3 30.841 107 72 2 14 119 35 140 1.29e-11 65.9
Msa0181190 AT4G32730.2 45.631 103 55 1 14 116 87 188 6.33e-27 111
Msa0181190 AT4G32730.2 30.841 107 72 2 14 119 35 140 1.29e-11 65.9
Msa0181190 AT4G32730.1 45.631 103 55 1 14 116 87 188 7.01e-27 110
Msa0181190 AT4G32730.1 30.841 107 72 2 14 119 35 140 1.28e-11 65.9
Msa0181190 AT2G23290.1 50.980 102 49 1 14 115 13 113 7.29e-27 107
Msa0181190 AT3G27785.1 45.763 118 58 3 8 122 183 297 2.11e-26 108
Msa0181190 AT4G37260.1 49.020 102 51 1 14 115 13 113 2.30e-26 106
Msa0181190 AT2G39880.1 48.544 103 50 2 14 115 50 150 4.22e-26 106
Msa0181190 AT3G09230.1 48.113 106 46 2 14 115 55 155 4.42e-26 106
Msa0181190 AT3G23250.2 73.333 60 16 0 58 117 1 60 9.39e-26 102
Msa0181190 AT4G33450.1 41.525 118 63 2 3 120 13 124 1.31e-25 102
Msa0181190 AT1G69560.1 45.045 111 58 2 9 118 102 210 1.66e-25 104
Msa0181190 AT1G69560.2 45.045 111 58 2 9 118 118 226 1.88e-25 104
Msa0181190 AT1G73410.1 47.009 117 56 3 14 129 6 117 1.93e-25 102
Msa0181190 AT5G67300.1 48.039 102 52 1 14 115 6 106 2.76e-25 103
Msa0181190 AT1G26780.1 41.221 131 69 3 14 143 98 221 2.97e-25 102
Msa0181190 AT1G73410.2 47.009 117 56 3 14 129 6 117 5.18e-25 100
Msa0181190 AT3G09370.2 47.059 102 53 1 14 115 135 235 6.43e-25 104
Msa0181190 AT3G09370.1 47.059 102 53 1 14 115 130 230 6.91e-25 104
Msa0181190 AT1G26780.2 41.221 131 69 3 14 143 98 221 7.85e-25 102
Msa0181190 AT3G09370.3 47.170 106 47 2 14 115 143 243 9.54e-25 104
Msa0181190 AT1G66380.3 62.500 72 27 0 44 115 7 78 1.21e-24 95.9
Msa0181190 AT5G17800.1 44.340 106 58 1 14 119 93 197 1.26e-24 101
Msa0181190 AT5G40360.1 37.500 136 83 2 1 136 145 278 1.48e-24 102
Msa0181190 AT1G17950.1 46.226 106 54 2 14 118 5 108 1.51e-24 99.8
Msa0181190 AT5G11510.3 46.667 105 51 2 14 116 81 182 1.60e-24 104
Msa0181190 AT5G11510.3 32.075 106 70 2 14 118 29 133 5.18e-11 63.9
Msa0181190 AT5G11510.1 46.667 105 51 2 14 116 81 182 1.60e-24 104
Msa0181190 AT5G11510.1 32.075 106 70 2 14 118 29 133 5.18e-11 63.9
Msa0181190 AT5G11510.4 46.667 105 51 2 14 116 81 182 1.60e-24 104
Msa0181190 AT5G11510.4 32.075 106 70 2 14 118 29 133 5.18e-11 63.9
Msa0181190 AT5G11510.2 45.631 103 55 1 14 116 81 182 1.73e-24 103
Msa0181190 AT5G11510.2 32.075 106 70 2 14 118 29 133 4.06e-11 64.3
Msa0181190 AT3G50060.1 38.356 146 86 2 14 159 6 147 1.75e-24 100
Msa0181190 AT5G11510.5 45.631 103 55 1 14 116 81 182 2.06e-24 103
Msa0181190 AT5G11510.5 32.075 106 70 2 14 118 29 133 4.57e-11 63.9
Msa0181190 AT4G18770.1 44.762 105 53 2 8 110 211 312 3.98e-24 101
Msa0181190 AT3G55730.1 47.573 103 51 2 14 115 56 156 4.61e-24 101
Msa0181190 AT1G22640.3 66.102 59 20 0 58 116 1 59 5.90e-24 97.1
Msa0181190 AT5G58850.1 39.552 134 62 4 14 130 105 236 1.54e-23 100
Msa0181190 AT5G11050.1 40.945 127 66 4 12 137 103 221 6.89e-23 98.2
Msa0181190 AT5G14750.4 62.712 59 22 0 58 116 1 59 7.09e-23 92.4
Msa0181190 AT5G14750.2 62.712 59 22 0 58 116 1 59 7.09e-23 92.4
Msa0181190 AT1G18960.1 40.833 120 67 3 14 133 10 125 1.03e-21 93.6
Msa0181190 AT1G66380.2 54.430 79 36 0 11 89 7 85 1.06e-21 88.6
Msa0181190 AT3G29020.1 40.000 105 62 1 14 118 65 168 1.45e-21 91.7
Msa0181190 AT2G25230.1 40.870 115 64 3 8 121 20 131 2.60e-21 90.9
Msa0181190 AT3G29020.2 40.000 105 62 1 14 118 67 170 2.67e-21 92.0
Msa0181190 AT4G00540.2 42.727 110 59 2 12 118 101 209 1.81e-20 91.3
Msa0181190 AT1G71030.2 53.030 66 31 0 51 116 5 70 2.06e-20 87.0
Msa0181190 AT1G71030.1 53.030 66 31 0 51 116 19 84 2.63e-20 87.0
Msa0181190 AT4G00540.1 42.727 110 59 2 12 118 99 207 3.16e-20 90.9
Msa0181190 AT2G37630.1 39.815 108 63 1 13 118 3 110 3.15e-19 87.4
Msa0181190 AT5G15310.3 51.190 84 35 1 88 165 9 92 1.00e-17 81.3
Msa0181190 AT5G40430.1 35.652 115 71 3 7 121 47 158 2.64e-17 80.1
Msa0181190 AT2G02820.3 37.273 110 65 2 8 117 27 132 5.66e-17 80.5
Msa0181190 AT2G02820.1 37.273 110 65 2 8 117 27 132 1.31e-16 80.1
Msa0181190 AT2G02820.2 37.273 110 65 2 8 117 27 132 1.34e-16 80.5
Msa0181190 AT5G39700.1 34.615 104 67 1 15 118 57 159 5.30e-16 75.1
Msa0181190 AT1G14350.2 35.200 125 71 3 8 132 22 136 2.27e-15 76.6
Msa0181190 AT1G14350.1 35.200 125 71 3 8 132 22 136 2.27e-15 76.6
Msa0181190 AT5G59780.1 57.143 49 21 0 70 118 1 49 1.89e-14 70.5
Msa0181190 AT3G46130.2 57.143 49 21 0 70 118 1 49 2.36e-14 70.9
Msa0181190 AT1G74650.3 76.923 39 9 0 78 116 2 40 3.04e-14 71.6
Msa0181190 AT3G28910.2 62.000 50 19 0 78 127 2 51 4.43e-14 70.9
Msa0181190 AT4G25560.2 67.442 43 14 0 73 115 5 47 4.74e-14 70.5
Msa0181190 AT5G61420.1 71.053 38 11 0 81 118 2 39 5.68e-12 65.5
Msa0181190 AT4G28110.2 75.000 32 8 0 88 119 4 35 6.59e-11 61.2

Find 77 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGACACGTTTCTTTAAA+TGG 0.094066 1_4:-69363642 None:intergenic
GCTTTGGTGTCGACACTTTC+AGG 0.182498 1_4:-69363996 None:intergenic
AAGCTTCAGTTTGTAGTTAC+TGG 0.214754 1_4:-69364052 None:intergenic
ATCACTATCATCATCGAAAT+TGG 0.245454 1_4:+69363924 Msa0181190:CDS
GAGTCCACTTTGCTTAATTC+AGG 0.272638 1_4:+69363790 Msa0181190:CDS
GATAGATCTGGTTCAGATTC+AGG 0.282629 1_4:+69364081 Msa0181190:CDS
TTGTTGTGAATTTATTACTA+TGG 0.292839 1_4:+69362022 Msa0181190:five_prime_UTR
CTGCGTATGCCTGATGAAAT+AGG 0.293386 1_4:+69364150 Msa0181190:CDS
ATCTCATTGTCTGTTCTTCC+TGG 0.294103 1_4:-69363601 None:intergenic
CTGATTACTTTCTTCAACTT+TGG 0.303149 1_4:+69363833 Msa0181190:CDS
TGAAGATGTTGACGTGATTC+AGG 0.322004 1_4:+69364020 Msa0181190:CDS
TGAATCACGTCAACATCTTC+AGG 0.331077 1_4:-69364018 None:intergenic
GCCTGATGAAATAGGATTCC+TGG 0.344813 1_4:+69364158 Msa0181190:CDS
ACTAAAGCTTCATCTTCTTC+AGG 0.351058 1_4:-69362127 None:intergenic
TTGACAGTACCTGCATGTTT+AGG 0.374019 1_4:-69362193 None:intergenic
CAAAGTTGAAGAAAGTAATC+AGG 0.381478 1_4:-69363832 None:intergenic
AATTTCTTGAATCTCCTTGA+TGG 0.383750 1_4:+69364192 Msa0181190:CDS
CCGGACACGTTTCTTTAAAT+GGG 0.388694 1_4:-69363641 None:intergenic
ACAATGAGATTAAGAACTAT+TGG 0.389201 1_4:+69363614 Msa0181190:CDS
CAACCCTTGCACTTTCCCAC+TGG 0.391631 1_4:-69363744 None:intergenic
GCGGCAAAAGTTGCCGGCTT+CGG 0.411394 1_4:+69363309 Msa0181190:CDS
TAAGATGCGGCAAAAGTTGC+CGG 0.416041 1_4:+69363303 Msa0181190:CDS
CAACTTTGGCATTCTGATGT+TGG 0.417033 1_4:+69363847 Msa0181190:CDS
ATGTTCAGACGTCTCATTGC+AGG 0.429353 1_4:+69363951 Msa0181190:CDS
TGGACCATGTGGCGTGTAGA+AGG 0.435919 1_4:-69363724 None:intergenic
TTAGACTGGACATTCCTATC+AGG 0.436155 1_4:-69363697 None:intergenic
ACGTCAACATCTTCAGGCTT+TGG 0.441280 1_4:-69364012 None:intergenic
ATCCATGTCTCCTTCCTGAT+AGG 0.449112 1_4:+69363683 Msa0181190:CDS
TTCATGCCATGCTTGGCAAC+AGG 0.452030 1_4:+69363405 Msa0181190:CDS
CCCAGGAATCCTATTTCATC+AGG 0.453232 1_4:-69364159 None:intergenic
ATTCAACTTCATGCCATGCT+TGG 0.464130 1_4:+69363398 Msa0181190:CDS
AAACGTGTCCGGCAGTCACT+AGG 0.471555 1_4:+69363652 Msa0181190:CDS
GATAGTTTATCCACCGAAGC+CGG 0.479363 1_4:-69363322 None:intergenic
GTGAATTTATTACTATGGTT+TGG 0.487429 1_4:+69362027 Msa0181190:five_prime_UTR
ACAAACATGGCCATGGGAGT+TGG 0.494826 1_4:+69362161 Msa0181190:CDS
AACGTGTCCGGCAGTCACTA+GGG 0.513368 1_4:+69363653 Msa0181190:CDS
AATGAGCCACGCTTGATGCC+AGG 0.516151 1_4:-69363350 None:intergenic
AAGCTTGAAGATGATAGATC+TGG 0.524702 1_4:+69364069 Msa0181190:CDS
GCAAAAGTTGCCGGCTTCGG+TGG 0.528545 1_4:+69363312 Msa0181190:CDS
CCTGATGAAATAGGATTCCT+GGG 0.529222 1_4:+69364159 Msa0181190:CDS
AGCAGAGACGAGGCTGTCGT+TGG 0.533698 1_4:+69363768 Msa0181190:CDS
TGGATAAACTATCTCCGTCC+TGG 0.539879 1_4:+69363332 Msa0181190:CDS
CCCATTTAAAGAAACGTGTC+CGG 0.543989 1_4:+69363641 Msa0181190:CDS
GCTATAGCAGCTCAACTACC+AGG 0.548333 1_4:+69363583 Msa0181190:CDS
TACATCAACAAACATGGCCA+TGG 0.548377 1_4:+69362154 Msa0181190:CDS
TGGTCCAGTGGGAAAGTGCA+AGG 0.548860 1_4:+69363740 Msa0181190:CDS
ACACCATGTTTCTCACAACA+AGG 0.553390 1_4:-69362085 None:intergenic
CTTAGTCACATCTACCATCA+AGG 0.561878 1_4:-69364206 None:intergenic
AGAAATTGTCAGTATGTCCC+AGG 0.567136 1_4:-69364176 None:intergenic
CACTTTCCCACTGGACCATG+TGG 0.567896 1_4:-69363735 None:intergenic
GAAGCGTACGCCAACTCCCA+TGG 0.573185 1_4:-69362171 None:intergenic
AAAGTTGAAGAAAGTAATCA+GGG 0.574085 1_4:-69363831 None:intergenic
GTGTAGAAGGAGAATTAGAC+TGG 0.576721 1_4:-69363711 None:intergenic
ACTATGGTTTGGTAATGAGT+TGG 0.582595 1_4:+69362038 Msa0181190:five_prime_UTR
ACCATGTTTCTCACAACAAG+GGG 0.583485 1_4:-69362083 None:intergenic
TTCCTATCAGGAAGGAGACA+TGG 0.585054 1_4:-69363685 None:intergenic
GAGGTACCTGTTGCCAAGCA+TGG 0.589470 1_4:-69363411 None:intergenic
TTCTCCTTCTACACGCCACA+TGG 0.594646 1_4:+69363720 Msa0181190:CDS
CTCCGTCCTGGCATCAAGCG+TGG 0.596733 1_4:+69363344 Msa0181190:CDS
CACCATGTTTCTCACAACAA+GGG 0.604587 1_4:-69362084 None:intergenic
CGTACGCTTCCTAAACATGC+AGG 0.612439 1_4:+69362184 Msa0181190:CDS
CAAGGGTTGAAGCAGAGACG+AGG 0.615393 1_4:+69363758 Msa0181190:CDS
ATGGTGTGAAAAGAGGAGCT+TGG 0.615720 1_4:+69362101 Msa0181190:CDS
AGAGCCTGAATTAAGCAAAG+TGG 0.615810 1_4:-69363794 None:intergenic
TTTCATCAGGCATACGCAGT+AGG 0.616891 1_4:-69364146 None:intergenic
TACACGCCACATGGTCCAGT+GGG 0.619297 1_4:+69363729 Msa0181190:CDS
ACATCAACAAACATGGCCAT+GGG 0.633448 1_4:+69362155 Msa0181190:CDS
GAGAAACATGGTGTGAAAAG+AGG 0.638729 1_4:+69362094 Msa0181190:CDS
AGCCACGCTTGATGCCAGGA+CGG 0.639664 1_4:-69363346 None:intergenic
GGTCCAGTGGGAAAGTGCAA+GGG 0.640638 1_4:+69363741 Msa0181190:CDS
ACGTGTCCGGCAGTCACTAG+GGG 0.641693 1_4:+69363654 Msa0181190:CDS
CTACACGCCACATGGTCCAG+TGG 0.643084 1_4:+69363728 Msa0181190:CDS
ACTGGACATTCCTATCAGGA+AGG 0.646417 1_4:-69363693 None:intergenic
GTTGACTACATCAACAAACA+TGG 0.659740 1_4:+69362148 Msa0181190:CDS
CAAGTAGGTCTCCTAAGATG+CGG 0.667276 1_4:+69363290 Msa0181190:intron
TGCTTTGACACACTACTGCG+CGG 0.719322 1_4:-69363879 None:intergenic
GCCCCTTGTTGTGAGAAACA+TGG 0.738695 1_4:+69362082 Msa0181190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAGATTCTTAATACA+CGG - chr1_4:69362464-69362483 None:intergenic 15.0%
!!! AATTTTAGATTCTTAATACA+CGG - chr1_4:69362464-69362483 None:intergenic 15.0%
!! TTGTTGTGAATTTATTACTA+TGG + chr1_4:69362022-69362041 Msa0181190:five_prime_UTR 20.0%
!! CATGAATAAAAAAAACCTTA+TGG + chr1_4:69362608-69362627 Msa0181190:intron 20.0%
!!! CAAAACAAAACTTTTACAAT+AGG - chr1_4:69362880-69362899 None:intergenic 20.0%
!!! TTATATTGATCTGAAACTTA+TGG + chr1_4:69363151-69363170 Msa0181190:intron 20.0%
!! TTGTTGTGAATTTATTACTA+TGG + chr1_4:69362022-69362041 Msa0181190:five_prime_UTR 20.0%
!! CATGAATAAAAAAAACCTTA+TGG + chr1_4:69362608-69362627 Msa0181190:intron 20.0%
!!! CAAAACAAAACTTTTACAAT+AGG - chr1_4:69362880-69362899 None:intergenic 20.0%
!!! TTATATTGATCTGAAACTTA+TGG + chr1_4:69363151-69363170 Msa0181190:intron 20.0%
! GTGAATTTATTACTATGGTT+TGG + chr1_4:69362027-69362046 Msa0181190:five_prime_UTR 25.0%
!!! TTTGGAATATTTTGAAGCTA+AGG + chr1_4:69362291-69362310 Msa0181190:intron 25.0%
! CTAAGGAAGAATATTTAGTA+TGG + chr1_4:69362308-69362327 Msa0181190:intron 25.0%
!!! TTAGTTTTCATACTCTTCAA+GGG + chr1_4:69362376-69362395 Msa0181190:intron 25.0%
!!! TTCAAGGGTTTTGAATATTA+CGG + chr1_4:69362391-69362410 Msa0181190:intron 25.0%
! CTTGTTTAGCAGAAAAATAT+TGG - chr1_4:69362495-69362514 None:intergenic 25.0%
! TTATAATAACCTATTGAGAG+AGG - chr1_4:69362809-69362828 None:intergenic 25.0%
!! AGTTATACTTTTCCTTATCT+CGG - chr1_4:69363088-69363107 None:intergenic 25.0%
! TATGTATGTTTACTACAAGT+AGG + chr1_4:69363275-69363294 Msa0181190:intron 25.0%
! ACAATGAGATTAAGAACTAT+TGG + chr1_4:69363614-69363633 Msa0181190:CDS 25.0%
! AAAGTTGAAGAAAGTAATCA+GGG - chr1_4:69363834-69363853 None:intergenic 25.0%
! GTGAATTTATTACTATGGTT+TGG + chr1_4:69362027-69362046 Msa0181190:five_prime_UTR 25.0%
!!! TTTGGAATATTTTGAAGCTA+AGG + chr1_4:69362291-69362310 Msa0181190:intron 25.0%
! CTAAGGAAGAATATTTAGTA+TGG + chr1_4:69362308-69362327 Msa0181190:intron 25.0%
!!! TTAGTTTTCATACTCTTCAA+GGG + chr1_4:69362376-69362395 Msa0181190:intron 25.0%
!!! TTCAAGGGTTTTGAATATTA+CGG + chr1_4:69362391-69362410 Msa0181190:intron 25.0%
! CTTGTTTAGCAGAAAAATAT+TGG - chr1_4:69362495-69362514 None:intergenic 25.0%
! TTATAATAACCTATTGAGAG+AGG - chr1_4:69362809-69362828 None:intergenic 25.0%
!! AGTTATACTTTTCCTTATCT+CGG - chr1_4:69363088-69363107 None:intergenic 25.0%
! TATGTATGTTTACTACAAGT+AGG + chr1_4:69363275-69363294 Msa0181190:intron 25.0%
! ACAATGAGATTAAGAACTAT+TGG + chr1_4:69363614-69363633 Msa0181190:CDS 25.0%
! AAAGTTGAAGAAAGTAATCA+GGG - chr1_4:69363834-69363853 None:intergenic 25.0%
!! AGTTGGTGAAAGTGAAAAAT+GGG + chr1_4:69362055-69362074 Msa0181190:exon 30.0%
AGCACAAAAGCAAAGAAAAA+GGG - chr1_4:69362234-69362253 None:intergenic 30.0%
AAGCACAAAAGCAAAGAAAA+AGG - chr1_4:69362235-69362254 None:intergenic 30.0%
!! CTTAGTTTTCATACTCTTCA+AGG + chr1_4:69362375-69362394 Msa0181190:intron 30.0%
CTATAAGCTTACTACTTTGA+AGG + chr1_4:69362546-69362565 Msa0181190:intron 30.0%
AATTGACCTAGCCAAAATTT+AGG + chr1_4:69362761-69362780 Msa0181190:intron 30.0%
ATTGACCTAGCCAAAATTTA+GGG + chr1_4:69362762-69362781 Msa0181190:intron 30.0%
CAAAATTTAGGGACATGTTA+GGG + chr1_4:69362773-69362792 Msa0181190:intron 30.0%
TGTGAAATGTATAACAGTTG+AGG + chr1_4:69362842-69362861 Msa0181190:intron 30.0%
GGACAATTGCAACAAATTTA+AGG - chr1_4:69362965-69362984 None:intergenic 30.0%
!! TTGAGATTGAGTTGGTTTAA+AGG - chr1_4:69362986-69363005 None:intergenic 30.0%
AATCTTGTCTTAAATAGACC+CGG + chr1_4:69363004-69363023 Msa0181190:intron 30.0%
ATGTTAACTCTTTGCATACA+TGG - chr1_4:69363204-69363223 None:intergenic 30.0%
CAGTGTCAAGAAAAATTTGT+TGG + chr1_4:69363505-69363524 Msa0181190:intron 30.0%
GATAACTATGCTATCTTTCT+AGG + chr1_4:69363554-69363573 Msa0181190:intron 30.0%
CAAAGTTGAAGAAAGTAATC+AGG - chr1_4:69363835-69363854 None:intergenic 30.0%
CTGATTACTTTCTTCAACTT+TGG + chr1_4:69363833-69363852 Msa0181190:CDS 30.0%
ATCACTATCATCATCGAAAT+TGG + chr1_4:69363924-69363943 Msa0181190:CDS 30.0%
AATTTCTTGAATCTCCTTGA+TGG + chr1_4:69364192-69364211 Msa0181190:CDS 30.0%
!! AGTTGGTGAAAGTGAAAAAT+GGG + chr1_4:69362055-69362074 Msa0181190:exon 30.0%
AGCACAAAAGCAAAGAAAAA+GGG - chr1_4:69362234-69362253 None:intergenic 30.0%
AAGCACAAAAGCAAAGAAAA+AGG - chr1_4:69362235-69362254 None:intergenic 30.0%
!! CTTAGTTTTCATACTCTTCA+AGG + chr1_4:69362375-69362394 Msa0181190:intron 30.0%
CTATAAGCTTACTACTTTGA+AGG + chr1_4:69362546-69362565 Msa0181190:intron 30.0%
AATTGACCTAGCCAAAATTT+AGG + chr1_4:69362761-69362780 Msa0181190:intron 30.0%
ATTGACCTAGCCAAAATTTA+GGG + chr1_4:69362762-69362781 Msa0181190:intron 30.0%
CAAAATTTAGGGACATGTTA+GGG + chr1_4:69362773-69362792 Msa0181190:intron 30.0%
TGTGAAATGTATAACAGTTG+AGG + chr1_4:69362842-69362861 Msa0181190:intron 30.0%
GGACAATTGCAACAAATTTA+AGG - chr1_4:69362965-69362984 None:intergenic 30.0%
!! TTGAGATTGAGTTGGTTTAA+AGG - chr1_4:69362986-69363005 None:intergenic 30.0%
AATCTTGTCTTAAATAGACC+CGG + chr1_4:69363004-69363023 Msa0181190:intron 30.0%
ATGTTAACTCTTTGCATACA+TGG - chr1_4:69363204-69363223 None:intergenic 30.0%
CAGTGTCAAGAAAAATTTGT+TGG + chr1_4:69363505-69363524 Msa0181190:intron 30.0%
GATAACTATGCTATCTTTCT+AGG + chr1_4:69363554-69363573 Msa0181190:intron 30.0%
CAAAGTTGAAGAAAGTAATC+AGG - chr1_4:69363835-69363854 None:intergenic 30.0%
CTGATTACTTTCTTCAACTT+TGG + chr1_4:69363833-69363852 Msa0181190:CDS 30.0%
ATCACTATCATCATCGAAAT+TGG + chr1_4:69363924-69363943 Msa0181190:CDS 30.0%
AATTTCTTGAATCTCCTTGA+TGG + chr1_4:69364192-69364211 Msa0181190:CDS 30.0%
!! ACTATGGTTTGGTAATGAGT+TGG + chr1_4:69362038-69362057 Msa0181190:five_prime_UTR 35.0%
!! GAGTTGGTGAAAGTGAAAAA+TGG + chr1_4:69362054-69362073 Msa0181190:exon 35.0%
ACTAAAGCTTCATCTTCTTC+AGG - chr1_4:69362130-69362149 None:intergenic 35.0%
GTTGACTACATCAACAAACA+TGG + chr1_4:69362148-69362167 Msa0181190:CDS 35.0%
! CCTAACATGTCCCTAAATTT+TGG - chr1_4:69362775-69362794 None:intergenic 35.0%
CCAAAATTTAGGGACATGTT+AGG + chr1_4:69362772-69362791 Msa0181190:intron 35.0%
! GAAGTATTACCTCTCTCAAT+AGG + chr1_4:69362797-69362816 Msa0181190:intron 35.0%
GAAATGTATAACAGTTGAGG+TGG + chr1_4:69362845-69362864 Msa0181190:intron 35.0%
!!! TTGTTTTGAGTTTGAATGCG+TGG + chr1_4:69362892-69362911 Msa0181190:intron 35.0%
AGACAAGATTGAGATTGAGT+TGG - chr1_4:69362994-69363013 None:intergenic 35.0%
TCTAAAGAATGACCGAGATA+AGG + chr1_4:69363073-69363092 Msa0181190:intron 35.0%
AGTTTGACCTAGTAATCTCA+AGG - chr1_4:69363130-69363149 None:intergenic 35.0%
GCAACACATTTAGTTACTGT+AGG - chr1_4:69363182-69363201 None:intergenic 35.0%
TCAACTCATCTTAGTCCTAA+AGG + chr1_4:69363446-69363465 Msa0181190:intron 35.0%
TATGAGTGGAATGAACCTTT+AGG - chr1_4:69363464-69363483 None:intergenic 35.0%
TTTACTAAGCAGGTTATGAG+TGG - chr1_4:69363478-69363497 None:intergenic 35.0%
AACTATGCTATCTTTCTAGG+TGG + chr1_4:69363557-69363576 Msa0181190:intron 35.0%
ACTATGCTATCTTTCTAGGT+GGG + chr1_4:69363558-69363577 Msa0181190:intron 35.0%
AAGCTTCAGTTTGTAGTTAC+TGG - chr1_4:69364055-69364074 None:intergenic 35.0%
AAGCTTGAAGATGATAGATC+TGG + chr1_4:69364069-69364088 Msa0181190:CDS 35.0%
!! ACTATGGTTTGGTAATGAGT+TGG + chr1_4:69362038-69362057 Msa0181190:five_prime_UTR 35.0%
!! GAGTTGGTGAAAGTGAAAAA+TGG + chr1_4:69362054-69362073 Msa0181190:exon 35.0%
ACTAAAGCTTCATCTTCTTC+AGG - chr1_4:69362130-69362149 None:intergenic 35.0%
GTTGACTACATCAACAAACA+TGG + chr1_4:69362148-69362167 Msa0181190:CDS 35.0%
! CCTAACATGTCCCTAAATTT+TGG - chr1_4:69362775-69362794 None:intergenic 35.0%
CCAAAATTTAGGGACATGTT+AGG + chr1_4:69362772-69362791 Msa0181190:intron 35.0%
! GAAGTATTACCTCTCTCAAT+AGG + chr1_4:69362797-69362816 Msa0181190:intron 35.0%
GAAATGTATAACAGTTGAGG+TGG + chr1_4:69362845-69362864 Msa0181190:intron 35.0%
!!! TTGTTTTGAGTTTGAATGCG+TGG + chr1_4:69362892-69362911 Msa0181190:intron 35.0%
AGACAAGATTGAGATTGAGT+TGG - chr1_4:69362994-69363013 None:intergenic 35.0%
TCTAAAGAATGACCGAGATA+AGG + chr1_4:69363073-69363092 Msa0181190:intron 35.0%
AGTTTGACCTAGTAATCTCA+AGG - chr1_4:69363130-69363149 None:intergenic 35.0%
GCAACACATTTAGTTACTGT+AGG - chr1_4:69363182-69363201 None:intergenic 35.0%
TCAACTCATCTTAGTCCTAA+AGG + chr1_4:69363446-69363465 Msa0181190:intron 35.0%
TATGAGTGGAATGAACCTTT+AGG - chr1_4:69363464-69363483 None:intergenic 35.0%
TTTACTAAGCAGGTTATGAG+TGG - chr1_4:69363478-69363497 None:intergenic 35.0%
AACTATGCTATCTTTCTAGG+TGG + chr1_4:69363557-69363576 Msa0181190:intron 35.0%
ACTATGCTATCTTTCTAGGT+GGG + chr1_4:69363558-69363577 Msa0181190:intron 35.0%
AAGCTTCAGTTTGTAGTTAC+TGG - chr1_4:69364055-69364074 None:intergenic 35.0%
AAGCTTGAAGATGATAGATC+TGG + chr1_4:69364069-69364088 Msa0181190:CDS 35.0%
ACCATGTTTCTCACAACAAG+GGG - chr1_4:69362086-69362105 None:intergenic 40.0%
CACCATGTTTCTCACAACAA+GGG - chr1_4:69362087-69362106 None:intergenic 40.0%
ACACCATGTTTCTCACAACA+AGG - chr1_4:69362088-69362107 None:intergenic 40.0%
GAGAAACATGGTGTGAAAAG+AGG + chr1_4:69362094-69362113 Msa0181190:CDS 40.0%
TACATCAACAAACATGGCCA+TGG + chr1_4:69362154-69362173 Msa0181190:CDS 40.0%
ACATCAACAAACATGGCCAT+GGG + chr1_4:69362155-69362174 Msa0181190:CDS 40.0%
TTGACAGTACCTGCATGTTT+AGG - chr1_4:69362196-69362215 None:intergenic 40.0%
CCAAAAGCTCACAGAAAGAA+AGG - chr1_4:69362276-69362295 None:intergenic 40.0%
! CCTTTCTTTCTGTGAGCTTT+TGG + chr1_4:69362273-69362292 Msa0181190:intron 40.0%
AACATGCTGAAATTGCTGCT+AGG - chr1_4:69362652-69362671 None:intergenic 40.0%
ATTTCAGCATGTTTCCCTTG+AGG + chr1_4:69362659-69362678 Msa0181190:intron 40.0%
!!! CATGTCCCTAAATTTTGGCT+AGG - chr1_4:69362770-69362789 None:intergenic 40.0%
TGACCTAGTAATCTCAAGGT+AGG - chr1_4:69363126-69363145 None:intergenic 40.0%
GACAGTGTAACAGAGAAAGA+TGG + chr1_4:69363226-69363245 Msa0181190:intron 40.0%
ATTCAACTTCATGCCATGCT+TGG + chr1_4:69363398-69363417 Msa0181190:CDS 40.0%
!! GAGTTGATAATAGAGCAGTG+AGG - chr1_4:69363433-69363452 None:intergenic 40.0%
CTGCAATGCATTTACTAAGC+AGG - chr1_4:69363488-69363507 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+TGG - chr1_4:69363604-69363623 None:intergenic 40.0%
CCGGACACGTTTCTTTAAAT+GGG - chr1_4:69363644-69363663 None:intergenic 40.0%
CCCATTTAAAGAAACGTGTC+CGG + chr1_4:69363641-69363660 Msa0181190:CDS 40.0%
TTAGACTGGACATTCCTATC+AGG - chr1_4:69363700-69363719 None:intergenic 40.0%
GTGTAGAAGGAGAATTAGAC+TGG - chr1_4:69363714-69363733 None:intergenic 40.0%
GAGTCCACTTTGCTTAATTC+AGG + chr1_4:69363790-69363809 Msa0181190:CDS 40.0%
AGAGCCTGAATTAAGCAAAG+TGG - chr1_4:69363797-69363816 None:intergenic 40.0%
CAACTTTGGCATTCTGATGT+TGG + chr1_4:69363847-69363866 Msa0181190:CDS 40.0%
TGAATCACGTCAACATCTTC+AGG - chr1_4:69364021-69364040 None:intergenic 40.0%
TGAAGATGTTGACGTGATTC+AGG + chr1_4:69364020-69364039 Msa0181190:CDS 40.0%
! GATAGATCTGGTTCAGATTC+AGG + chr1_4:69364081-69364100 Msa0181190:CDS 40.0%
CCTGATGAAATAGGATTCCT+GGG + chr1_4:69364159-69364178 Msa0181190:CDS 40.0%
AGAAATTGTCAGTATGTCCC+AGG - chr1_4:69364179-69364198 None:intergenic 40.0%
ACCATGTTTCTCACAACAAG+GGG - chr1_4:69362086-69362105 None:intergenic 40.0%
CACCATGTTTCTCACAACAA+GGG - chr1_4:69362087-69362106 None:intergenic 40.0%
ACACCATGTTTCTCACAACA+AGG - chr1_4:69362088-69362107 None:intergenic 40.0%
GAGAAACATGGTGTGAAAAG+AGG + chr1_4:69362094-69362113 Msa0181190:CDS 40.0%
TACATCAACAAACATGGCCA+TGG + chr1_4:69362154-69362173 Msa0181190:CDS 40.0%
ACATCAACAAACATGGCCAT+GGG + chr1_4:69362155-69362174 Msa0181190:CDS 40.0%
TTGACAGTACCTGCATGTTT+AGG - chr1_4:69362196-69362215 None:intergenic 40.0%
CCAAAAGCTCACAGAAAGAA+AGG - chr1_4:69362276-69362295 None:intergenic 40.0%
! CCTTTCTTTCTGTGAGCTTT+TGG + chr1_4:69362273-69362292 Msa0181190:intron 40.0%
AACATGCTGAAATTGCTGCT+AGG - chr1_4:69362652-69362671 None:intergenic 40.0%
ATTTCAGCATGTTTCCCTTG+AGG + chr1_4:69362659-69362678 Msa0181190:intron 40.0%
!!! CATGTCCCTAAATTTTGGCT+AGG - chr1_4:69362770-69362789 None:intergenic 40.0%
TGACCTAGTAATCTCAAGGT+AGG - chr1_4:69363126-69363145 None:intergenic 40.0%
GACAGTGTAACAGAGAAAGA+TGG + chr1_4:69363226-69363245 Msa0181190:intron 40.0%
ATTCAACTTCATGCCATGCT+TGG + chr1_4:69363398-69363417 Msa0181190:CDS 40.0%
!! GAGTTGATAATAGAGCAGTG+AGG - chr1_4:69363433-69363452 None:intergenic 40.0%
CTGCAATGCATTTACTAAGC+AGG - chr1_4:69363488-69363507 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+TGG - chr1_4:69363604-69363623 None:intergenic 40.0%
CCGGACACGTTTCTTTAAAT+GGG - chr1_4:69363644-69363663 None:intergenic 40.0%
CCCATTTAAAGAAACGTGTC+CGG + chr1_4:69363641-69363660 Msa0181190:CDS 40.0%
TTAGACTGGACATTCCTATC+AGG - chr1_4:69363700-69363719 None:intergenic 40.0%
GTGTAGAAGGAGAATTAGAC+TGG - chr1_4:69363714-69363733 None:intergenic 40.0%
GAGTCCACTTTGCTTAATTC+AGG + chr1_4:69363790-69363809 Msa0181190:CDS 40.0%
AGAGCCTGAATTAAGCAAAG+TGG - chr1_4:69363797-69363816 None:intergenic 40.0%
CAACTTTGGCATTCTGATGT+TGG + chr1_4:69363847-69363866 Msa0181190:CDS 40.0%
TGAATCACGTCAACATCTTC+AGG - chr1_4:69364021-69364040 None:intergenic 40.0%
TGAAGATGTTGACGTGATTC+AGG + chr1_4:69364020-69364039 Msa0181190:CDS 40.0%
! GATAGATCTGGTTCAGATTC+AGG + chr1_4:69364081-69364100 Msa0181190:CDS 40.0%
CCTGATGAAATAGGATTCCT+GGG + chr1_4:69364159-69364178 Msa0181190:CDS 40.0%
AGAAATTGTCAGTATGTCCC+AGG - chr1_4:69364179-69364198 None:intergenic 40.0%
ATGGTGTGAAAAGAGGAGCT+TGG + chr1_4:69362101-69362120 Msa0181190:CDS 45.0%
ACACAACTGGAGCAACCATA+AGG - chr1_4:69362626-69362645 None:intergenic 45.0%
TGCTGCTAGGAAAACACAAC+TGG - chr1_4:69362639-69362658 None:intergenic 45.0%
AAACCCAGACATGCTGATAC+GGG - chr1_4:69362709-69362728 None:intergenic 45.0%
CAAACCCAGACATGCTGATA+CGG - chr1_4:69362710-69362729 None:intergenic 45.0%
! TCAGCATGTCTGGGTTTGTT+CGG + chr1_4:69362712-69362731 Msa0181190:intron 45.0%
TTCGGGTCTAGCAATGAGTT+AGG + chr1_4:69362730-69362749 Msa0181190:intron 45.0%
TCGGGTCTAGCAATGAGTTA+GGG + chr1_4:69362731-69362750 Msa0181190:intron 45.0%
! ATCGGGTTTGTTCGTGTCTA+GGG + chr1_4:69363036-69363055 Msa0181190:intron 45.0%
GCTCCTACCTTGAGATTACT+AGG + chr1_4:69363120-69363139 Msa0181190:intron 45.0%
CAAGTAGGTCTCCTAAGATG+CGG + chr1_4:69363290-69363309 Msa0181190:intron 45.0%
TAAGATGCGGCAAAAGTTGC+CGG + chr1_4:69363303-69363322 Msa0181190:CDS 45.0%
GATAGTTTATCCACCGAAGC+CGG - chr1_4:69363325-69363344 None:intergenic 45.0%
TGGATAAACTATCTCCGTCC+TGG + chr1_4:69363332-69363351 Msa0181190:CDS 45.0%
GCCGGACACGTTTCTTTAAA+TGG - chr1_4:69363645-69363664 None:intergenic 45.0%
ATCCATGTCTCCTTCCTGAT+AGG + chr1_4:69363683-69363702 Msa0181190:CDS 45.0%
TTCCTATCAGGAAGGAGACA+TGG - chr1_4:69363688-69363707 None:intergenic 45.0%
ACTGGACATTCCTATCAGGA+AGG - chr1_4:69363696-69363715 None:intergenic 45.0%
ATGTTCAGACGTCTCATTGC+AGG + chr1_4:69363951-69363970 Msa0181190:CDS 45.0%
ACGTCAACATCTTCAGGCTT+TGG - chr1_4:69364015-69364034 None:intergenic 45.0%
TTTCATCAGGCATACGCAGT+AGG - chr1_4:69364149-69364168 None:intergenic 45.0%
CTGCGTATGCCTGATGAAAT+AGG + chr1_4:69364150-69364169 Msa0181190:CDS 45.0%
GCCTGATGAAATAGGATTCC+TGG + chr1_4:69364158-69364177 Msa0181190:CDS 45.0%
CCCAGGAATCCTATTTCATC+AGG - chr1_4:69364162-69364181 None:intergenic 45.0%
ATGGTGTGAAAAGAGGAGCT+TGG + chr1_4:69362101-69362120 Msa0181190:CDS 45.0%
ACACAACTGGAGCAACCATA+AGG - chr1_4:69362626-69362645 None:intergenic 45.0%
TGCTGCTAGGAAAACACAAC+TGG - chr1_4:69362639-69362658 None:intergenic 45.0%
AAACCCAGACATGCTGATAC+GGG - chr1_4:69362709-69362728 None:intergenic 45.0%
CAAACCCAGACATGCTGATA+CGG - chr1_4:69362710-69362729 None:intergenic 45.0%
! TCAGCATGTCTGGGTTTGTT+CGG + chr1_4:69362712-69362731 Msa0181190:intron 45.0%
TTCGGGTCTAGCAATGAGTT+AGG + chr1_4:69362730-69362749 Msa0181190:intron 45.0%
TCGGGTCTAGCAATGAGTTA+GGG + chr1_4:69362731-69362750 Msa0181190:intron 45.0%
! ATCGGGTTTGTTCGTGTCTA+GGG + chr1_4:69363036-69363055 Msa0181190:intron 45.0%
GCTCCTACCTTGAGATTACT+AGG + chr1_4:69363120-69363139 Msa0181190:intron 45.0%
CAAGTAGGTCTCCTAAGATG+CGG + chr1_4:69363290-69363309 Msa0181190:intron 45.0%
TAAGATGCGGCAAAAGTTGC+CGG + chr1_4:69363303-69363322 Msa0181190:CDS 45.0%
GATAGTTTATCCACCGAAGC+CGG - chr1_4:69363325-69363344 None:intergenic 45.0%
TGGATAAACTATCTCCGTCC+TGG + chr1_4:69363332-69363351 Msa0181190:CDS 45.0%
GCCGGACACGTTTCTTTAAA+TGG - chr1_4:69363645-69363664 None:intergenic 45.0%
ATCCATGTCTCCTTCCTGAT+AGG + chr1_4:69363683-69363702 Msa0181190:CDS 45.0%
TTCCTATCAGGAAGGAGACA+TGG - chr1_4:69363688-69363707 None:intergenic 45.0%
ACTGGACATTCCTATCAGGA+AGG - chr1_4:69363696-69363715 None:intergenic 45.0%
ATGTTCAGACGTCTCATTGC+AGG + chr1_4:69363951-69363970 Msa0181190:CDS 45.0%
ACGTCAACATCTTCAGGCTT+TGG - chr1_4:69364015-69364034 None:intergenic 45.0%
TTTCATCAGGCATACGCAGT+AGG - chr1_4:69364149-69364168 None:intergenic 45.0%
CTGCGTATGCCTGATGAAAT+AGG + chr1_4:69364150-69364169 Msa0181190:CDS 45.0%
GCCTGATGAAATAGGATTCC+TGG + chr1_4:69364158-69364177 Msa0181190:CDS 45.0%
CCCAGGAATCCTATTTCATC+AGG - chr1_4:69364162-69364181 None:intergenic 45.0%
! GCCCCTTGTTGTGAGAAACA+TGG + chr1_4:69362082-69362101 Msa0181190:CDS 50.0%
ACAAACATGGCCATGGGAGT+TGG + chr1_4:69362161-69362180 Msa0181190:CDS 50.0%
CGTACGCTTCCTAAACATGC+AGG + chr1_4:69362184-69362203 Msa0181190:CDS 50.0%
CAGCATGTTTCCCTTGAGGT+AGG + chr1_4:69362663-69362682 Msa0181190:intron 50.0%
ACATGCTGATACGGGTCTTC+GGG - chr1_4:69362701-69362720 None:intergenic 50.0%
GACATGCTGATACGGGTCTT+CGG - chr1_4:69362702-69362721 None:intergenic 50.0%
AAGACCCGTATCAGCATGTC+TGG + chr1_4:69362702-69362721 Msa0181190:intron 50.0%
AGACCCGTATCAGCATGTCT+GGG + chr1_4:69362703-69362722 Msa0181190:intron 50.0%
! CAGCATGTCTGGGTTTGTTC+GGG + chr1_4:69362713-69362732 Msa0181190:intron 50.0%
! CATCGGGTTTGTTCGTGTCT+AGG + chr1_4:69363035-69363054 Msa0181190:intron 50.0%
TGTCTAGGGACGACGAGTTT+GGG + chr1_4:69363050-69363069 Msa0181190:intron 50.0%
CTCAAGGTAGGAGCGAACAA+GGG - chr1_4:69363114-69363133 None:intergenic 50.0%
TCTCAAGGTAGGAGCGAACA+AGG - chr1_4:69363115-69363134 None:intergenic 50.0%
! GGCAACTTTTGCCGCATCTT+AGG - chr1_4:69363304-69363323 None:intergenic 50.0%
TTCATGCCATGCTTGGCAAC+AGG + chr1_4:69363405-69363424 Msa0181190:CDS 50.0%
GCTATAGCAGCTCAACTACC+AGG + chr1_4:69363583-69363602 Msa0181190:CDS 50.0%
! GTTTTTCCCCTAGTGACTGC+CGG - chr1_4:69363663-69363682 None:intergenic 50.0%
TTCTCCTTCTACACGCCACA+TGG + chr1_4:69363720-69363739 Msa0181190:CDS 50.0%
TGCTTTGACACACTACTGCG+CGG - chr1_4:69363882-69363901 None:intergenic 50.0%
!! GCTTTGGTGTCGACACTTTC+AGG - chr1_4:69363999-69364018 None:intergenic 50.0%
! GCCCCTTGTTGTGAGAAACA+TGG + chr1_4:69362082-69362101 Msa0181190:CDS 50.0%
ACAAACATGGCCATGGGAGT+TGG + chr1_4:69362161-69362180 Msa0181190:CDS 50.0%
CGTACGCTTCCTAAACATGC+AGG + chr1_4:69362184-69362203 Msa0181190:CDS 50.0%
CAGCATGTTTCCCTTGAGGT+AGG + chr1_4:69362663-69362682 Msa0181190:intron 50.0%
ACATGCTGATACGGGTCTTC+GGG - chr1_4:69362701-69362720 None:intergenic 50.0%
GACATGCTGATACGGGTCTT+CGG - chr1_4:69362702-69362721 None:intergenic 50.0%
AAGACCCGTATCAGCATGTC+TGG + chr1_4:69362702-69362721 Msa0181190:intron 50.0%
AGACCCGTATCAGCATGTCT+GGG + chr1_4:69362703-69362722 Msa0181190:intron 50.0%
! CAGCATGTCTGGGTTTGTTC+GGG + chr1_4:69362713-69362732 Msa0181190:intron 50.0%
! CATCGGGTTTGTTCGTGTCT+AGG + chr1_4:69363035-69363054 Msa0181190:intron 50.0%
TGTCTAGGGACGACGAGTTT+GGG + chr1_4:69363050-69363069 Msa0181190:intron 50.0%
CTCAAGGTAGGAGCGAACAA+GGG - chr1_4:69363114-69363133 None:intergenic 50.0%
TCTCAAGGTAGGAGCGAACA+AGG - chr1_4:69363115-69363134 None:intergenic 50.0%
! GGCAACTTTTGCCGCATCTT+AGG - chr1_4:69363304-69363323 None:intergenic 50.0%
TTCATGCCATGCTTGGCAAC+AGG + chr1_4:69363405-69363424 Msa0181190:CDS 50.0%
GCTATAGCAGCTCAACTACC+AGG + chr1_4:69363583-69363602 Msa0181190:CDS 50.0%
! GTTTTTCCCCTAGTGACTGC+CGG - chr1_4:69363663-69363682 None:intergenic 50.0%
TTCTCCTTCTACACGCCACA+TGG + chr1_4:69363720-69363739 Msa0181190:CDS 50.0%
TGCTTTGACACACTACTGCG+CGG - chr1_4:69363882-69363901 None:intergenic 50.0%
!! GCTTTGGTGTCGACACTTTC+AGG - chr1_4:69363999-69364018 None:intergenic 50.0%
CATGCTCGCACCTACCTCAA+GGG - chr1_4:69362676-69362695 None:intergenic 55.0%
TCATGCTCGCACCTACCTCA+AGG - chr1_4:69362677-69362696 None:intergenic 55.0%
TAGACCCGGTCGTAGAGCAT+CGG + chr1_4:69363018-69363037 Msa0181190:intron 55.0%
AAACCCGATGCTCTACGACC+GGG - chr1_4:69363025-69363044 None:intergenic 55.0%
CAAACCCGATGCTCTACGAC+CGG - chr1_4:69363026-69363045 None:intergenic 55.0%
GTGTCTAGGGACGACGAGTT+TGG + chr1_4:69363049-69363068 Msa0181190:intron 55.0%
AATGAGCCACGCTTGATGCC+AGG - chr1_4:69363353-69363372 None:intergenic 55.0%
! GAGGTACCTGTTGCCAAGCA+TGG - chr1_4:69363414-69363433 None:intergenic 55.0%
AAACGTGTCCGGCAGTCACT+AGG + chr1_4:69363652-69363671 Msa0181190:CDS 55.0%
AACGTGTCCGGCAGTCACTA+GGG + chr1_4:69363653-69363672 Msa0181190:CDS 55.0%
TGGACCATGTGGCGTGTAGA+AGG - chr1_4:69363727-69363746 None:intergenic 55.0%
TACACGCCACATGGTCCAGT+GGG + chr1_4:69363729-69363748 Msa0181190:CDS 55.0%
CACTTTCCCACTGGACCATG+TGG - chr1_4:69363738-69363757 None:intergenic 55.0%
! TGGTCCAGTGGGAAAGTGCA+AGG + chr1_4:69363740-69363759 Msa0181190:CDS 55.0%
! GGTCCAGTGGGAAAGTGCAA+GGG + chr1_4:69363741-69363760 Msa0181190:CDS 55.0%
CAACCCTTGCACTTTCCCAC+TGG - chr1_4:69363747-69363766 None:intergenic 55.0%
CAAGGGTTGAAGCAGAGACG+AGG + chr1_4:69363758-69363777 Msa0181190:CDS 55.0%
CATGCTCGCACCTACCTCAA+GGG - chr1_4:69362676-69362695 None:intergenic 55.0%
TCATGCTCGCACCTACCTCA+AGG - chr1_4:69362677-69362696 None:intergenic 55.0%
TAGACCCGGTCGTAGAGCAT+CGG + chr1_4:69363018-69363037 Msa0181190:intron 55.0%
AAACCCGATGCTCTACGACC+GGG - chr1_4:69363025-69363044 None:intergenic 55.0%
CAAACCCGATGCTCTACGAC+CGG - chr1_4:69363026-69363045 None:intergenic 55.0%
GTGTCTAGGGACGACGAGTT+TGG + chr1_4:69363049-69363068 Msa0181190:intron 55.0%
AATGAGCCACGCTTGATGCC+AGG - chr1_4:69363353-69363372 None:intergenic 55.0%
! GAGGTACCTGTTGCCAAGCA+TGG - chr1_4:69363414-69363433 None:intergenic 55.0%
AAACGTGTCCGGCAGTCACT+AGG + chr1_4:69363652-69363671 Msa0181190:CDS 55.0%
AACGTGTCCGGCAGTCACTA+GGG + chr1_4:69363653-69363672 Msa0181190:CDS 55.0%
TGGACCATGTGGCGTGTAGA+AGG - chr1_4:69363727-69363746 None:intergenic 55.0%
TACACGCCACATGGTCCAGT+GGG + chr1_4:69363729-69363748 Msa0181190:CDS 55.0%
CACTTTCCCACTGGACCATG+TGG - chr1_4:69363738-69363757 None:intergenic 55.0%
! TGGTCCAGTGGGAAAGTGCA+AGG + chr1_4:69363740-69363759 Msa0181190:CDS 55.0%
! GGTCCAGTGGGAAAGTGCAA+GGG + chr1_4:69363741-69363760 Msa0181190:CDS 55.0%
CAACCCTTGCACTTTCCCAC+TGG - chr1_4:69363747-69363766 None:intergenic 55.0%
CAAGGGTTGAAGCAGAGACG+AGG + chr1_4:69363758-69363777 Msa0181190:CDS 55.0%
GAAGCGTACGCCAACTCCCA+TGG - chr1_4:69362174-69362193 None:intergenic 60.0%
! AGACCCGGTCGTAGAGCATC+GGG + chr1_4:69363019-69363038 Msa0181190:intron 60.0%
!! GCGGCAAAAGTTGCCGGCTT+CGG + chr1_4:69363309-69363328 Msa0181190:CDS 60.0%
!! GCAAAAGTTGCCGGCTTCGG+TGG + chr1_4:69363312-69363331 Msa0181190:CDS 60.0%
AGCCACGCTTGATGCCAGGA+CGG - chr1_4:69363349-69363368 None:intergenic 60.0%
ACGTGTCCGGCAGTCACTAG+GGG + chr1_4:69363654-69363673 Msa0181190:CDS 60.0%
CTACACGCCACATGGTCCAG+TGG + chr1_4:69363728-69363747 Msa0181190:CDS 60.0%
AGCAGAGACGAGGCTGTCGT+TGG + chr1_4:69363768-69363787 Msa0181190:CDS 60.0%
GAAGCGTACGCCAACTCCCA+TGG - chr1_4:69362174-69362193 None:intergenic 60.0%
! AGACCCGGTCGTAGAGCATC+GGG + chr1_4:69363019-69363038 Msa0181190:intron 60.0%
!! GCGGCAAAAGTTGCCGGCTT+CGG + chr1_4:69363309-69363328 Msa0181190:CDS 60.0%
!! GCAAAAGTTGCCGGCTTCGG+TGG + chr1_4:69363312-69363331 Msa0181190:CDS 60.0%
AGCCACGCTTGATGCCAGGA+CGG - chr1_4:69363349-69363368 None:intergenic 60.0%
ACGTGTCCGGCAGTCACTAG+GGG + chr1_4:69363654-69363673 Msa0181190:CDS 60.0%
CTACACGCCACATGGTCCAG+TGG + chr1_4:69363728-69363747 Msa0181190:CDS 60.0%
AGCAGAGACGAGGCTGTCGT+TGG + chr1_4:69363768-69363787 Msa0181190:CDS 60.0%
CTCCGTCCTGGCATCAAGCG+TGG + chr1_4:69363344-69363363 Msa0181190:CDS 65.0%
CTCCGTCCTGGCATCAAGCG+TGG + chr1_4:69363344-69363363 Msa0181190:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 69361986 69364227 69361986 ID=Msa0181190;Name=Msa0181190
chr1_4 mRNA 69361986 69364227 69361986 ID=Msa0181190-mRNA-1;Parent=Msa0181190;Name=Msa0181190-mRNA-1;_AED=0.07;_eAED=0.07;_QI=87|1|0.66|1|1|1|3|0|304
chr1_4 exon 69361986 69362205 69361986 ID=Msa0181190-mRNA-1:exon:23007;Parent=Msa0181190-mRNA-1
chr1_4 exon 69363297 69363426 69363297 ID=Msa0181190-mRNA-1:exon:23008;Parent=Msa0181190-mRNA-1
chr1_4 exon 69363576 69364227 69363576 ID=Msa0181190-mRNA-1:exon:23009;Parent=Msa0181190-mRNA-1
chr1_4 five_prime_UTR 69361986 69362072 69361986 ID=Msa0181190-mRNA-1:five_prime_utr;Parent=Msa0181190-mRNA-1
chr1_4 CDS 69362073 69362205 69362073 ID=Msa0181190-mRNA-1:cds;Parent=Msa0181190-mRNA-1
chr1_4 CDS 69363297 69363426 69363297 ID=Msa0181190-mRNA-1:cds;Parent=Msa0181190-mRNA-1
chr1_4 CDS 69363576 69364227 69363576 ID=Msa0181190-mRNA-1:cds;Parent=Msa0181190-mRNA-1
Gene Sequence

>Msa0181190

ATGGGTAAAGCCCCTTGTTGTGAGAAACATGGTGTGAAAAGAGGAGCTTGGACTCCTGAAGAAGATGAAGCTTTAGTTGACTACATCAACAAACATGGCCATGGGAGTTGGCGTACGCTTCCTAAACATGCAGGTCTCCTAAGATGCGGCAAAAGTTGCCGGCTTCGGTGGATAAACTATCTCCGTCCTGGCATCAAGCGTGGCTCATTTACTAATGAAGAAGAAACTACTATTATTCAACTTCATGCCATGCTTGGCAACAGGTGGGCTGCTATAGCAGCTCAACTACCAGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATTTAAAGAAACGTGTCCGGCAGTCACTAGGGGAAAAACATCCATGTCTCCTTCCTGATAGGAATGTCCAGTCTAATTCTCCTTCTACACGCCACATGGTCCAGTGGGAAAGTGCAAGGGTTGAAGCAGAGACGAGGCTGTCGTTGGAGTCCACTTTGCTTAATTCAGGCTCTACGACTAAAACATACCCTGATTACTTTCTTCAACTTTGGCATTCTGATGTTGGAGAGAAATTCCGCGCAGTAGTGTGTCAAAGCACTGTCTCACAAGCATCATCATCATCACTATCATCATCGAAATTGGAGTCATGTTCAGACGTCTCATTGCAGGTGAAAAACAACGAAACACAGAGCCTGAAAGTGTCGACACCAAAGCCTGAAGATGTTGACGTGATTCAGGAACAAAAAGCCAGTAACTACAAACTGAAGCTTGAAGATGATAGATCTGGTTCAGATTCAGGAAATTACGAGTTTCTTGATACTTCTGATTCTGCACTGAAGCACCTACTGCGTATGCCTGATGAAATAGGATTCCTGGGACATACTGACAATTTCTTGAATCTCCTTGATGGTAGATGTGACTAA
Protein sequence

>Msa0181190

MGKAPCCEKHGVKRGAWTPEEDEALVDYINKHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPGIKRGSFTNEEETTIIQLHAMLGNRWAAIAAQLPGRTDNEIKNYWNTHLKKRVRQSLGEKHPCLLPDRNVQSNSPSTRHMVQWESARVEAETRLSLESTLLNSGSTTKTYPDYFLQLWHSDVGEKFRAVVCQSTVSQASSSSLSSSKLESCSDVSLQVKNNETQSLKVSTPKPEDVDVIQEQKASNYKLKLEDDRSGSDSGNYEFLDTSDSALKHLLRMPDEIGFLGHTDNFLNLLDGRCD*