AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0184640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184640 MtrunA17_Chr2g0322731 51.213 701 291 11 40 698 74 765 0.0 671
Msa0184640 MtrunA17_Chr4g0024351 50.502 697 296 10 43 698 41 729 0.0 658
Msa0184640 MtrunA17_Chr5g0394111 43.875 702 288 14 42 699 8 647 5.04e-174 512
Msa0184640 MtrunA17_Chr8g0350321 41.536 703 346 13 59 698 106 806 2.35e-173 516
Msa0184640 MtrunA17_Chr7g0246631 40.948 696 335 15 67 698 91 774 5.04e-172 511
Msa0184640 MtrunA17_Chr1g0203671 39.087 701 356 14 65 698 93 789 1.47e-161 485
Msa0184640 MtrunA17_Chr2g0331581 35.259 675 358 14 73 698 145 789 3.10e-136 419
Msa0184640 MtrunA17_Chr6g0472471 36.028 705 358 16 73 698 75 765 9.08e-136 417
Msa0184640 MtrunA17_Chr6g0481041 36.040 702 375 16 66 698 27 723 7.63e-135 414
Msa0184640 MtrunA17_Chr5g0410711 35.605 719 374 19 59 702 78 782 9.15e-134 413
Msa0184640 MtrunA17_Chr1g0205981 84.574 188 27 1 122 307 1 188 1.38e-103 314
Msa0184640 MtrunA17_Chr7g0224451 37.731 432 211 12 65 482 14 401 2.42e-81 265
Msa0184640 MtrunA17_Chr2g0292731 32.480 508 288 13 209 666 12 514 2.19e-71 242
Msa0184640 MtrunA17_Chr2g0292741 33.193 476 265 12 209 635 4 475 2.90e-70 239
Msa0184640 MtrunA17_Chr7g0224481 35.772 369 180 11 65 419 14 339 1.19e-57 199
Msa0184640 MtrunA17_Chr2g0292761 28.646 576 348 14 149 699 4 541 1.50e-57 204
Msa0184640 MtrunA17_Chr2g0319671 47.093 172 85 2 301 472 103 268 6.77e-46 166
Msa0184640 MtrunA17_Chr7g0224491 35.505 307 154 11 422 698 1 293 3.43e-44 160
Msa0184640 MtrunA17_Chr2g0319691 54.054 111 49 1 362 472 1 109 1.75e-33 125
Msa0184640 MtrunA17_Chr5g0419821 41.667 132 75 1 58 187 23 154 1.21e-26 107
Msa0184640 MtrunA17_Chr2g0319681 33.173 208 130 4 495 698 23 225 1.47e-22 97.4
Msa0184640 MtrunA17_Chr2g0319701 32.843 204 124 6 500 698 28 223 4.82e-20 90.1
Msa0184640 MtrunA17_Chr2g0304191 34.351 131 81 2 261 386 1 131 1.46e-15 73.9
Msa0184640 MtrunA17_Chr2g0326731 23.775 551 291 23 58 554 10 485 2.42e-15 80.1
Msa0184640 MtrunA17_Chr2g0292391 21.296 756 403 29 53 701 2 672 5.19e-15 79.0
Msa0184640 MtrunA17_Chr7g0224461 31.452 124 61 4 589 698 1 114 2.29e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184640 AT4G21750.2 48.813 758 299 13 22 699 10 758 0.0 691
Msa0184640 AT4G21750.1 48.813 758 299 13 22 699 10 758 0.0 691
Msa0184640 AT4G21750.3 48.813 758 299 13 22 699 10 758 0.0 691
Msa0184640 AT4G21750.4 48.813 758 299 13 22 699 10 758 0.0 691
Msa0184640 AT4G04890.2 52.478 686 275 14 60 698 54 735 0.0 686
Msa0184640 AT4G04890.1 52.478 686 275 14 60 698 54 735 0.0 686
Msa0184640 AT1G05230.8 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.4 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.9 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.10 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.7 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.11 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.2 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.6 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.5 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.1 48.851 696 295 10 44 698 41 716 0.0 644
Msa0184640 AT1G05230.3 48.707 696 294 11 44 698 41 714 0.0 637
Msa0184640 AT1G05230.12 49.135 578 238 8 44 580 41 603 0.0 542
Msa0184640 AT3G61150.1 41.185 709 327 16 66 698 109 803 2.57e-174 519
Msa0184640 AT4G00730.1 40.799 701 327 14 59 698 125 798 5.86e-168 502
Msa0184640 AT2G32370.1 39.942 691 352 14 46 695 49 717 1.75e-157 473
Msa0184640 AT5G52170.3 37.755 686 327 15 58 698 48 678 3.59e-142 432
Msa0184640 AT5G52170.1 37.755 686 327 15 58 698 48 678 3.59e-142 432
Msa0184640 AT5G52170.2 37.482 691 327 15 58 698 48 683 3.06e-141 429
Msa0184640 AT1G73360.1 36.006 686 383 12 66 698 31 713 1.92e-134 413
Msa0184640 AT1G79840.3 35.286 683 352 16 66 698 42 684 3.62e-129 398
Msa0184640 AT1G79840.6 35.286 683 352 16 66 698 42 684 3.62e-129 398
Msa0184640 AT1G79840.1 35.286 683 352 16 66 698 100 742 1.47e-128 399
Msa0184640 AT1G79840.2 35.286 683 352 16 66 698 129 771 8.40e-128 397
Msa0184640 AT1G17920.2 35.746 677 362 15 73 698 27 681 3.90e-125 388
Msa0184640 AT1G17920.1 35.746 677 362 15 73 698 27 681 3.90e-125 388
Msa0184640 AT3G03260.1 34.577 697 364 17 68 698 24 694 6.82e-113 356
Msa0184640 AT5G46880.3 34.107 689 371 19 59 674 104 782 2.54e-112 358
Msa0184640 AT5G46880.1 34.107 689 371 19 59 674 104 782 2.54e-112 358
Msa0184640 AT5G46880.2 34.107 689 371 19 59 674 104 782 2.54e-112 358
Msa0184640 AT4G00730.2 40.938 469 216 9 59 491 125 568 1.35e-106 336
Msa0184640 AT4G17710.1 33.481 675 366 17 59 700 81 705 4.52e-105 336
Msa0184640 AT1G79840.4 34.946 558 279 14 66 576 100 620 7.08e-103 328
Msa0184640 AT4G25530.1 31.746 693 385 14 54 698 30 682 7.73e-97 314
Msa0184640 AT5G17320.1 31.564 716 396 23 59 698 18 715 8.08e-90 296
Msa0184640 AT1G34650.1 31.367 695 395 19 74 698 23 705 1.61e-86 287
Msa0184640 AT3G03260.2 35.084 533 276 12 68 548 24 538 4.59e-85 278
Msa0184640 AT1G79840.5 37.071 437 222 12 66 486 100 499 4.53e-82 270
Msa0184640 AT5G07260.1 25.847 561 303 21 126 641 3 495 1.41e-33 136
Msa0184640 AT5G07260.2 26.032 557 302 22 126 641 3 490 5.88e-33 134
Msa0184640 AT2G34710.1 21.935 734 391 28 73 699 28 686 3.23e-18 89.7

Find 161 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTCTTCAATCGGTTATT+TGG 0.114581 1_4:+74207161 Msa0184640:CDS
CTCTTGCTGGATCCCCTTTA+TGG 0.142742 1_4:+74208637 Msa0184640:CDS
GAGCTTCATTTCTAGAATTT+TGG 0.158862 1_4:-74207200 None:intergenic
CCCCGTGAGTTTCGGACTTT+TGG 0.171515 1_4:-74208715 None:intergenic
CATTATCCTTTACCTTAATT+TGG 0.181539 1_4:-74207536 None:intergenic
AATTGAGAATGCTAGATTAA+AGG 0.219959 1_4:+74208197 Msa0184640:CDS
GACATTTCACCAGTAGAAAT+TGG 0.230263 1_4:-74208153 None:intergenic
GAAGCACCACCATATTATTT+TGG 0.238800 1_4:-74213360 None:intergenic
GGAAGCAAAGCAACAAAATT+TGG 0.246586 1_4:-74213472 None:intergenic
TTAGTGTTGGAACTTCTATT+TGG 0.254156 1_4:+74211410 Msa0184640:CDS
GTTGATGGTGGTTAGGATCT+TGG 0.260432 1_4:-74207239 None:intergenic
GAAATTGGATCAGTACAATT+TGG 0.265525 1_4:-74208138 None:intergenic
GTCCTTCTGTAGCTAGTTGC+TGG 0.266212 1_4:+74211302 Msa0184640:intron
GTTTCCTTTGCTTGCCATTA+GGG 0.283292 1_4:-74207449 None:intergenic
TGTTTCCTTTGCTTGCCATT+AGG 0.288076 1_4:-74207450 None:intergenic
ATAACTTCTGGTCTTGCCTT+TGG 0.290016 1_4:+74210313 Msa0184640:CDS
TAATCTCATTGATATCCTTA+TGG 0.293429 1_4:+74208788 Msa0184640:CDS
TGCTGAAAATGAGATTTATA+AGG 0.303963 1_4:+74208092 Msa0184640:CDS
AGAAGCACCAAGAAGGGATA+TGG 0.307095 1_4:+74209914 Msa0184640:CDS
CTTCTTTGTTGATGGTGGTT+AGG 0.308209 1_4:-74207246 None:intergenic
CCACTGCCCATATCCCTTCT+TGG 0.314521 1_4:-74209921 None:intergenic
GTTGCTTTGTCAAAATCATT+AGG 0.315448 1_4:-74208567 None:intergenic
TCTAAGTTGATTGTCGTTAG+AGG 0.316867 1_4:-74208175 None:intergenic
AGAACTTGCTGTGGTTTCTA+TGG 0.322944 1_4:+74208596 Msa0184640:CDS
TATAAATCTTTAATAACTTC+TGG 0.327409 1_4:+74210301 Msa0184640:CDS
ATTTATGCTCCGGTTGATAT+TGG 0.334121 1_4:+74213418 Msa0184640:CDS
ATCTACACCTGCATTTGAAA+TGG 0.335392 1_4:+74208464 Msa0184640:CDS
CACCTACGCAAATCAAGTTC+TGG 0.335520 1_4:+74207496 Msa0184640:CDS
AAACAAGCGCAACCAAATTA+AGG 0.338062 1_4:+74207524 Msa0184640:CDS
TGGAACTTCTATTTGGCTTC+CGG 0.345537 1_4:+74211417 Msa0184640:CDS
GTTATTAAAGATTTATAGAA+TGG 0.351722 1_4:-74210295 None:intergenic
TCTACTCTTCTTGTTGGACT+TGG 0.352812 1_4:-74213610 None:intergenic
CTCACAATGTTAACTCTTGC+TGG 0.354778 1_4:+74208624 Msa0184640:CDS
GAATTTAACCCCGTGAGTTT+CGG 0.355247 1_4:-74208723 None:intergenic
CATCTGATTGTGACGATGTA+AGG 0.356882 1_4:+74211335 Msa0184640:CDS
AGTTACTTCTTCTTTGTTGA+TGG 0.359122 1_4:-74207254 None:intergenic
GTTCTATCACCTGGAGTGTC+AGG 0.361997 1_4:+74209014 Msa0184640:CDS
AGGTTCACCAATACTTGTTT+TGG 0.366406 1_4:-74211365 None:intergenic
TGGCAAGCAAAGGAAACAAT+TGG 0.370644 1_4:+74207455 Msa0184640:CDS
CAATGCTACTTTGATCCGTT+TGG 0.373909 1_4:-74213677 None:intergenic
ATAACACATGGTCGTGATCT+TGG 0.375211 1_4:+74213159 Msa0184640:CDS
TAATTGCGACCAAAATAATA+TGG 0.382978 1_4:+74213351 Msa0184640:CDS
AAGAGATGGGTGACCTCATT+AGG 0.385790 1_4:+74210340 Msa0184640:CDS
CAGTGGGATGTTCTTTCCGT+TGG 0.395595 1_4:+74213111 Msa0184640:intron
GTTCTCAATTGTGCCCTATC+GGG 0.401218 1_4:-74213514 None:intergenic
ATGTACTACTACTTGGTTGC+AGG 0.403605 1_4:-74209963 None:intergenic
ACAATACCAGTAGGTGTTCC+AGG 0.410735 1_4:-74211385 None:intergenic
TTTGTTGCTTTGCTTCCCTC+TGG 0.413727 1_4:+74213478 Msa0184640:CDS
TTCTGAATCTTCAAGAGAAT+CGG 0.421428 1_4:+74208743 Msa0184640:CDS
TCATTGGTGGAAATCCATAA+AGG 0.424927 1_4:-74208651 None:intergenic
TGTGATGGCAATGACCCCTT+AGG 0.427537 1_4:+74208531 Msa0184640:CDS
CATACCTTTGAACAACCATT+TGG 0.429043 1_4:-74210027 None:intergenic
AGTGGGATGTTCTTTCCGTT+GGG 0.429047 1_4:+74213112 Msa0184640:intron
GGCAGTGGTTGATGTTTCCT+TGG 0.429868 1_4:+74209936 Msa0184640:CDS
CGTGTCAATGTACTACTACT+TGG 0.431548 1_4:-74209970 None:intergenic
GCTGAAAATGAGATTTATAA+GGG 0.432066 1_4:+74208093 Msa0184640:CDS
TCTGTGAATGCAATCTTAAA+TGG 0.432736 1_4:+74213442 Msa0184640:CDS
TAACATCTATTTAGGTTACA+TGG 0.434505 1_4:+74210230 Msa0184640:intron
AAACAATTGGGTTGTGAGCT+AGG 0.435034 1_4:+74207468 Msa0184640:CDS
CCCAAAAGTCCGAAACTCAC+GGG 0.438000 1_4:+74208714 Msa0184640:CDS
AAAAGCCTCCTTGGAACAAC+CGG 0.439163 1_4:-74211436 None:intergenic
GGTTCTCAATTGTGCCCTAT+CGG 0.442618 1_4:-74213515 None:intergenic
GTTTAGAATCTCAGTGTCAT+TGG 0.442788 1_4:-74208667 None:intergenic
ATCAACATCACTTCTTCAAT+CGG 0.448285 1_4:+74207153 Msa0184640:CDS
GAGCAATGCCCTCTCCCTAA+TGG 0.448625 1_4:+74207435 Msa0184640:CDS
ATGCTTAATTATGTTGAACT+TGG 0.451961 1_4:+74213547 Msa0184640:CDS
CATTGGTGGAAATCCATAAA+GGG 0.456139 1_4:-74208650 None:intergenic
TTGCCTTTGGAGCTAAGAGA+TGG 0.456296 1_4:+74210326 Msa0184640:CDS
TACTTCTTCTTTGTTGATGG+TGG 0.456523 1_4:-74207251 None:intergenic
GTCTTCTACAGGTATGTTGT+TGG 0.464682 1_4:-74210395 None:intergenic
TGTACTGATCCAATTTCTAC+TGG 0.464976 1_4:+74208144 Msa0184640:CDS
GGTGAACCTGGAACACCTAC+TGG 0.466104 1_4:+74211379 Msa0184640:CDS
CTTAATTATGTTGAACTTGG+AGG 0.468920 1_4:+74213550 Msa0184640:CDS
TCTACACCTGCATTTGAAAT+GGG 0.468937 1_4:+74208465 Msa0184640:CDS
ACTGGTATTGTTCTTAGTGT+TGG 0.469493 1_4:+74211397 Msa0184640:CDS
GTCACATGTTATTTATGCTC+CGG 0.478576 1_4:+74213408 Msa0184640:CDS
CAAAATCATTAGGAATTGAG+AGG 0.481538 1_4:-74208557 None:intergenic
AGTAAACGATGTAGATCTAG+TGG 0.483303 1_4:+74208416 Msa0184640:CDS
CTTTGCTTGCCATTAGGGAG+AGG 0.485297 1_4:-74207444 None:intergenic
ATTGAAGAAGTGATGTTGAT+TGG 0.487313 1_4:-74207150 None:intergenic
GCATGTCTCGAAATTGTTGT+TGG 0.489021 1_4:-74207128 None:intergenic
TCCTTCTGTAGCTAGTTGCT+GGG 0.489084 1_4:+74211303 Msa0184640:intron
TTGTATTTCCCTGACACTCC+AGG 0.491222 1_4:-74209023 None:intergenic
TTCACAGAACCAATATCAAC+CGG 0.493030 1_4:-74213427 None:intergenic
AATGAGATTAATATGACTCA+TGG 0.499793 1_4:-74208775 None:intergenic
TGTTGTTGGTGTACTGATTG+AGG 0.500312 1_4:-74207114 None:intergenic
TTTGCTTGCCATTAGGGAGA+GGG 0.507766 1_4:-74207443 None:intergenic
TTAATTCAAGAACTACCAAA+TGG 0.513476 1_4:+74210012 Msa0184640:CDS
GAAGCACCAAGAAGGGATAT+GGG 0.516565 1_4:+74209915 Msa0184640:CDS
TTTGGCTTCCGGTTGTTCCA+AGG 0.518609 1_4:+74211428 Msa0184640:CDS
AGGAATTGAGAGGGACCCTA+AGG 0.522532 1_4:-74208547 None:intergenic
GGCAAGCAAAGGAAACAATT+GGG 0.526817 1_4:+74207456 Msa0184640:CDS
CCACTTCCCATTTCAAATGC+AGG 0.528835 1_4:-74208471 None:intergenic
TCCCAAAAGTCCGAAACTCA+CGG 0.534087 1_4:+74208713 Msa0184640:CDS
TAAACGAAGTTGAATACCCT+AGG 0.535905 1_4:+74208685 Msa0184640:CDS
TCTTAGATTGAAATGTTCAC+AGG 0.536806 1_4:+74208387 Msa0184640:intron
GTGGGATGTTCTTTCCGTTG+GGG 0.539001 1_4:+74213113 Msa0184640:intron
GTGATGGCAATGACCCCTTA+GGG 0.541659 1_4:+74208532 Msa0184640:CDS
TGTTACTCACCACATCCATA+AGG 0.542549 1_4:-74208803 None:intergenic
GTCATGACCAAAACAAGTAT+TGG 0.543952 1_4:+74211358 Msa0184640:CDS
AATTGAAAGGAAAATGGTTG+AGG 0.544455 1_4:+74207050 None:intergenic
ACACCACAATGGTCTTCTAC+AGG 0.546742 1_4:-74210406 None:intergenic
CTGAAAATGAGATTTATAAG+GGG 0.547052 1_4:+74208094 Msa0184640:CDS
TATTCTAAGAAGCACCAAGA+AGG 0.548624 1_4:+74209907 Msa0184640:CDS
GAATGCTAGATTAAAGGTTG+AGG 0.549279 1_4:+74208203 Msa0184640:CDS
ATCTGATTGTGACGATGTAA+GGG 0.553401 1_4:+74211336 Msa0184640:CDS
TTGACACGAAGACGACCCTC+TGG 0.556162 1_4:+74209985 Msa0184640:CDS
CACCCATCTCTTAGCTCCAA+AGG 0.557537 1_4:-74210329 None:intergenic
AAAACAAGTATTGGTGAACC+TGG 0.558177 1_4:+74211367 Msa0184640:CDS
CGAGCAGGAACCAGTGGTGA+AGG 0.561584 1_4:-74209865 None:intergenic
ACACTTGAAGTTCTATCACC+TGG 0.562131 1_4:+74209005 Msa0184640:CDS
TATATGCATGCAGACACAAC+AGG 0.563812 1_4:+74208023 Msa0184640:intron
CCTGCATTTGAAATGGGAAG+TGG 0.564061 1_4:+74208471 Msa0184640:CDS
AACGATTGTAGAACTTGCTG+TGG 0.564853 1_4:+74208587 Msa0184640:CDS
GGTTAGGATCTTGGTCTCGA+AGG 0.567881 1_4:-74207230 None:intergenic
CATTGATATCCTTATGGATG+TGG 0.570663 1_4:+74208794 Msa0184640:CDS
CAAACGGATCAAAGTAGCAT+TGG 0.575903 1_4:+74213678 Msa0184640:CDS
TGCCTTTGGAGCTAAGAGAT+GGG 0.576583 1_4:+74210327 Msa0184640:CDS
TAGAATCTCAGTGTCATTGG+TGG 0.577352 1_4:-74208664 None:intergenic
CCAAGAAGGGATATGGGCAG+TGG 0.578162 1_4:+74209921 Msa0184640:CDS
ATTCTAAGAAGCACCAAGAA+GGG 0.578884 1_4:+74209908 Msa0184640:CDS
TGGGATGTTCTTTCCGTTGG+GGG 0.579262 1_4:+74213114 Msa0184640:CDS
TTCTCAATTGTGCCCTATCG+GGG 0.581221 1_4:-74213513 None:intergenic
ACTTGCTGTGGTTTCTATGG+AGG 0.581567 1_4:+74208599 Msa0184640:CDS
TTCACATTGTCTACCTAATG+AGG 0.582090 1_4:-74210353 None:intergenic
AAACGAAGTTGAATACCCTA+GGG 0.587167 1_4:+74208686 Msa0184640:CDS
TAGTTAAGAACACAACCAAA+CGG 0.589021 1_4:+74213662 Msa0184640:CDS
GTTAGGATCTTGGTCTCGAA+GGG 0.591139 1_4:-74207229 None:intergenic
ATGGGTAGAGCATGTAGAAG+TGG 0.593325 1_4:+74210249 Msa0184640:CDS
AACATCTATTTAGGTTACAT+GGG 0.594451 1_4:+74210231 Msa0184640:intron
ACTACCAAATGGTTGTTCAA+AGG 0.598187 1_4:+74210023 Msa0184640:CDS
ACTTGGTTGCAGGTGATCCA+AGG 0.598845 1_4:-74209953 None:intergenic
ACAATAACATTGATAGTACA+TGG 0.609718 1_4:+74213386 Msa0184640:CDS
TCTTGAATTAAACAACCAGA+GGG 0.610220 1_4:-74210000 None:intergenic
AGGGCACAATTGAGAACCAC+AGG 0.611548 1_4:+74213520 Msa0184640:CDS
CTCTCCCTAATGGCAAGCAA+AGG 0.612273 1_4:+74207445 Msa0184640:CDS
TTCTATCACCTGGAGTGTCA+GGG 0.612390 1_4:+74209015 Msa0184640:CDS
GGAATTGAGAGGGACCCTAA+GGG 0.613172 1_4:-74208546 None:intergenic
AGTTCAACATAATTAAGCAT+AGG 0.615403 1_4:-74213544 None:intergenic
AAAATCATTAGGAATTGAGA+GGG 0.623957 1_4:-74208556 None:intergenic
ACACTAAGAACAATACCAGT+AGG 0.625896 1_4:-74211394 None:intergenic
CCAAAAGTCCGAAACTCACG+GGG 0.627216 1_4:+74208715 Msa0184640:CDS
TTCTTGAATTAAACAACCAG+AGG 0.628816 1_4:-74210001 None:intergenic
AACAGTGTCACATCAAAATG+TGG 0.629990 1_4:+74207083 Msa0184640:CDS
ATAGAAGAATTGTATTGTGA+TGG 0.630421 1_4:+74208516 Msa0184640:CDS
GGCTTCCGGTTGTTCCAAGG+AGG 0.634589 1_4:+74211431 Msa0184640:CDS
ATAATTAAGCATAGGTCCTG+TGG 0.640980 1_4:-74213536 None:intergenic
TGAAAATGAGATTTATAAGG+GGG 0.644287 1_4:+74208095 Msa0184640:CDS
GTAAACGATGTAGATCTAGT+GGG 0.648604 1_4:+74208417 Msa0184640:CDS
AAATCAAAATTCAAGAAGTG+AGG 0.648827 1_4:+74211471 Msa0184640:CDS
GGAGTGTCAGGGAAATACAA+TGG 0.654696 1_4:+74209026 Msa0184640:CDS
ATTGGTGGAAATCCATAAAG+GGG 0.655135 1_4:-74208649 None:intergenic
TTGCGACCAAAATAATATGG+TGG 0.657066 1_4:+74213354 Msa0184640:CDS
GAATTGAGAGGGACCCTAAG+GGG 0.659587 1_4:-74208545 None:intergenic
AACCAGAACTTGATTTGCGT+AGG 0.660427 1_4:-74207498 None:intergenic
ATACAATGGAGCTCTACAAG+TGG 0.665675 1_4:+74209040 Msa0184640:CDS
GGGGAGAATAACAAAACCAG+AGG 0.682229 1_4:-74213494 None:intergenic
GGGAGAATAACAAAACCAGA+GGG 0.693191 1_4:-74213493 None:intergenic
GAAATGGAACACATAACACA+TGG 0.699091 1_4:+74213147 Msa0184640:CDS
GTGAATGCAATCTTAAATGG+TGG 0.703104 1_4:+74213445 Msa0184640:CDS
ATACCTGTAGAAGACCATTG+TGG 0.788141 1_4:+74210403 Msa0184640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAAATATTTTTTTTATT+AGG + chr1_4:74212086-74212105 Msa0184640:intron 0.0%
!! ATGTTTAATTATCTAAAAAA+AGG - chr1_4:74207343-74207362 None:intergenic 10.0%
!!! TAGTACAAATTTATTTTTAA+GGG - chr1_4:74207602-74207621 None:intergenic 10.0%
!!! ATAGTACAAATTTATTTTTA+AGG - chr1_4:74207603-74207622 None:intergenic 10.0%
!!! GTAAATTTTTACTTATATTT+TGG + chr1_4:74207753-74207772 Msa0184640:intron 10.0%
!!! TTTTTTAAACTAAATCAAAA+AGG - chr1_4:74209083-74209102 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAAAGTG+GGG - chr1_4:74209648-74209667 None:intergenic 10.0%
!!! ATTTTTATTGTTTTTTGAAA+AGG + chr1_4:74210692-74210711 Msa0184640:intron 10.0%
!! AAAAAAAAATTATAATTGCA+TGG - chr1_4:74210859-74210878 None:intergenic 10.0%
!! TTGATATATTCATAAAATAT+TGG + chr1_4:74211767-74211786 Msa0184640:intron 10.0%
!! TATATTTGATTAACATATAT+TGG - chr1_4:74211879-74211898 None:intergenic 10.0%
!!! TATAAATATTTTTAACATCA+GGG + chr1_4:74211980-74211999 Msa0184640:intron 10.0%
!!! AATTATATTTTTACTTTTGT+GGG + chr1_4:74212914-74212933 Msa0184640:intron 10.0%
!!! AATTTTTACTTATATTTTGG+TGG + chr1_4:74207756-74207775 Msa0184640:intron 15.0%
!!! ACATTAATGTATTTTCATTT+TGG + chr1_4:74207911-74207930 Msa0184640:intron 15.0%
!!! AAGATATCAATAATTTTCAT+AGG + chr1_4:74208825-74208844 Msa0184640:intron 15.0%
!!! ATAATATTGCAATTTTCTAT+TGG + chr1_4:74208925-74208944 Msa0184640:intron 15.0%
!!! AAAAGTACAAGAATTTTTTT+AGG + chr1_4:74209354-74209373 Msa0184640:intron 15.0%
!!! AAAGTACAAGAATTTTTTTA+GGG + chr1_4:74209355-74209374 Msa0184640:intron 15.0%
!! AAAAAAAAAAAAAAAAGTGG+GGG - chr1_4:74209647-74209666 None:intergenic 15.0%
!! AATGTAAATTGTTAAATACA+TGG - chr1_4:74210147-74210166 None:intergenic 15.0%
!! GTTATTAAAGATTTATAGAA+TGG - chr1_4:74210298-74210317 None:intergenic 15.0%
!! TATAAATCTTTAATAACTTC+TGG + chr1_4:74210301-74210320 Msa0184640:CDS 15.0%
!!! CTATGTGTATATTAAAATTT+TGG - chr1_4:74210590-74210609 None:intergenic 15.0%
!!! CAAAATTTTAATATACACAT+AGG + chr1_4:74210588-74210607 Msa0184640:intron 15.0%
!!! TTATAATGGAAAAATAAAGA+AGG - chr1_4:74210736-74210755 None:intergenic 15.0%
!! AAAATGGTCAATAATTATAA+TGG - chr1_4:74210750-74210769 None:intergenic 15.0%
!!! CAACTATTTTTAAATTAACA+AGG + chr1_4:74210985-74211004 Msa0184640:intron 15.0%
!! TTTATAACATTATAACATCA+CGG - chr1_4:74211545-74211564 None:intergenic 15.0%
!! TATATTCATAAAATATTGGA+TGG + chr1_4:74211771-74211790 Msa0184640:intron 15.0%
!!! TAAATATTTTTTACTTAGAC+AGG - chr1_4:74211949-74211968 None:intergenic 15.0%
!!! GTATAAATATTTTTAACATC+AGG + chr1_4:74211979-74211998 Msa0184640:intron 15.0%
!! AAATTTAAGAAACAAAGTAT+CGG - chr1_4:74212197-74212216 None:intergenic 15.0%
!!! GAATTATATTTTTACTTTTG+TGG + chr1_4:74212913-74212932 Msa0184640:intron 15.0%
!! CTAGAATATATATATAATCT+TGG - chr1_4:74213246-74213265 None:intergenic 15.0%
!!! TTTTTGTTTATAATTGAGAC+TGG - chr1_4:74207628-74207647 None:intergenic 20.0%
!! CATTCAATAACTAATGTATT+CGG + chr1_4:74207685-74207704 Msa0184640:intron 20.0%
!! GATAATGCATAAAATATGAT+AGG - chr1_4:74207804-74207823 None:intergenic 20.0%
!! TCAAATTATAATGCACAATT+TGG - chr1_4:74207987-74208006 None:intergenic 20.0%
!!! TTTATTTCTCATTTTCTTGT+TGG + chr1_4:74208328-74208347 Msa0184640:intron 20.0%
!!! AGATATTTGATCAATTTTAG+AGG - chr1_4:74208448-74208467 None:intergenic 20.0%
!!! AAGTACAAGAATTTTTTTAG+GGG + chr1_4:74209356-74209375 Msa0184640:intron 20.0%
!! GTTCAAAAACAATAGATAAA+AGG - chr1_4:74209436-74209455 None:intergenic 20.0%
!!! TCTATTGTTTTTGAACTTTT+TGG + chr1_4:74209440-74209459 Msa0184640:intron 20.0%
!! AAAAAAAAAAAAAAAGTGGG+GGG - chr1_4:74209646-74209665 None:intergenic 20.0%
!!! ATAGATGTTACAATTCATTT+TGG - chr1_4:74210220-74210239 None:intergenic 20.0%
!! ATGAATTGTAACATCTATTT+AGG + chr1_4:74210222-74210241 Msa0184640:intron 20.0%
!! ATTAAAAATATACACCACAA+TGG - chr1_4:74210420-74210439 None:intergenic 20.0%
!! TCCTTAATTAATGCTAATTT+CGG - chr1_4:74210521-74210540 None:intergenic 20.0%
!!! TGTCTTATTCATTTTTTAAG+TGG + chr1_4:74211125-74211144 Msa0184640:intron 20.0%
!!! GTCTTATTCATTTTTTAAGT+GGG + chr1_4:74211126-74211145 Msa0184640:intron 20.0%
!! TTATAACATTATAACATCAC+GGG - chr1_4:74211544-74211563 None:intergenic 20.0%
!!! TTGATTCTTTCATTTTGTTT+TGG + chr1_4:74211672-74211691 Msa0184640:intron 20.0%
!! AACAAGACAATTAATACAAA+AGG - chr1_4:74211817-74211836 None:intergenic 20.0%
!! TAACATATATTGGACAAAAA+TGG - chr1_4:74211869-74211888 None:intergenic 20.0%
!! TAATCAAATATAATCCCTAA+TGG + chr1_4:74211887-74211906 Msa0184640:intron 20.0%
!!! TTTTCTTTTTTTTTTTTCCG+CGG + chr1_4:74211923-74211942 Msa0184640:intron 20.0%
!!! TTTTTTTTTTTAGCAACATC+AGG + chr1_4:74212005-74212024 Msa0184640:intron 20.0%
!!! TTTTTTTTTTAGCAACATCA+GGG + chr1_4:74212006-74212025 Msa0184640:intron 20.0%
!!! GTACTATAAAAGTTCTTTTA+AGG - chr1_4:74212155-74212174 None:intergenic 20.0%
!! TATAGTACATTTGTAAATTG+AGG + chr1_4:74212167-74212186 Msa0184640:intron 20.0%
!! AAAAAAATTTATCCTCCTAT+TGG + chr1_4:74212298-74212317 Msa0184640:intron 20.0%
!! AAAAAATTTATCCTCCTATT+GGG + chr1_4:74212299-74212318 Msa0184640:intron 20.0%
!! AAAAAATCTTATCTTAATGC+CGG - chr1_4:74212826-74212845 None:intergenic 20.0%
!! AATTGTAAAATAGAACAAAC+TGG + chr1_4:74212943-74212962 Msa0184640:intron 20.0%
!!! ATTTTGTTGAATTTTACAGT+GGG + chr1_4:74213095-74213114 Msa0184640:intron 20.0%
!! ATAAAATTTGAGAGAAAGTT+AGG - chr1_4:74213280-74213299 None:intergenic 20.0%
! ACAAAAACAGATTCAAGAAA+TGG + chr1_4:74207287-74207306 Msa0184640:CDS 25.0%
!! TCTAAAAAAAGGAAGAGTAT+TGG - chr1_4:74207332-74207351 None:intergenic 25.0%
! CATTATCCTTTACCTTAATT+TGG - chr1_4:74207539-74207558 None:intergenic 25.0%
! TAAGATCTCACATTTCAAAA+GGG - chr1_4:74207566-74207585 None:intergenic 25.0%
! CATTCAATAACCAATGTATT+TGG - chr1_4:74207723-74207742 None:intergenic 25.0%
!!! TTTTACTTATATTTTGGTGG+TGG + chr1_4:74207759-74207778 Msa0184640:intron 25.0%
!! TTCATCAAAATGATCTTTTG+AGG + chr1_4:74208049-74208068 Msa0184640:CDS 25.0%
!! TCATCAAAATGATCTTTTGA+GGG + chr1_4:74208050-74208069 Msa0184640:CDS 25.0%
! TGCTGAAAATGAGATTTATA+AGG + chr1_4:74208092-74208111 Msa0184640:CDS 25.0%
! GCTGAAAATGAGATTTATAA+GGG + chr1_4:74208093-74208112 Msa0184640:CDS 25.0%
! CTGAAAATGAGATTTATAAG+GGG + chr1_4:74208094-74208113 Msa0184640:CDS 25.0%
! TGAAAATGAGATTTATAAGG+GGG + chr1_4:74208095-74208114 Msa0184640:CDS 25.0%
! AATTGAGAATGCTAGATTAA+AGG + chr1_4:74208197-74208216 Msa0184640:CDS 25.0%
!!! TATTTGATCAATTTTAGAGG+AGG - chr1_4:74208445-74208464 None:intergenic 25.0%
! ATAGAAGAATTGTATTGTGA+TGG + chr1_4:74208516-74208535 Msa0184640:CDS 25.0%
! AAAATCATTAGGAATTGAGA+GGG - chr1_4:74208559-74208578 None:intergenic 25.0%
! AATGAGATTAATATGACTCA+TGG - chr1_4:74208778-74208797 None:intergenic 25.0%
! TAATCTCATTGATATCCTTA+TGG + chr1_4:74208788-74208807 Msa0184640:CDS 25.0%
!!! AGTACAAGAATTTTTTTAGG+GGG + chr1_4:74209357-74209376 Msa0184640:intron 25.0%
!!! TTGTTTTTGAACTTTTTGGT+CGG + chr1_4:74209444-74209463 Msa0184640:intron 25.0%
! ATGATCAAGTGTTTATAAGT+GGG - chr1_4:74209515-74209534 None:intergenic 25.0%
! TTAAACCATCTAAGAATTTG+TGG + chr1_4:74209561-74209580 Msa0184640:intron 25.0%
!!! GTTTTTTAAAGTCGAATTTG+AGG - chr1_4:74209601-74209620 None:intergenic 25.0%
! TTAATTCAAGAACTACCAAA+TGG + chr1_4:74210012-74210031 Msa0184640:CDS 25.0%
!! TAACATCTATTTAGGTTACA+TGG + chr1_4:74210230-74210249 Msa0184640:intron 25.0%
!! AACATCTATTTAGGTTACAT+GGG + chr1_4:74210231-74210250 Msa0184640:intron 25.0%
!!! ATCTATCTTTTTCAAGAAGT+CGG + chr1_4:74210486-74210505 Msa0184640:intron 25.0%
! ACCGAAATTAGCATTAATTA+AGG + chr1_4:74210517-74210536 Msa0184640:intron 25.0%
! TGCTAATAAGTAGATGAAAA+TGG - chr1_4:74210766-74210785 None:intergenic 25.0%
!!! TTTTTTTTATCAGTGCTTCT+AGG - chr1_4:74211028-74211047 None:intergenic 25.0%
! AAATCAAAATTCAAGAAGTG+AGG + chr1_4:74211471-74211490 Msa0184640:CDS 25.0%
!!! ATTTTGTTTTGGCCTTATAT+TGG + chr1_4:74211683-74211702 Msa0184640:intron 25.0%
!!! TTTTGTTTTGGCCTTATATT+GGG + chr1_4:74211684-74211703 Msa0184640:intron 25.0%
!! ACTTCTTAATTTTTCCATGA+TGG + chr1_4:74211726-74211745 Msa0184640:intron 25.0%
!! CTTCTTAATTTTTCCATGAT+GGG + chr1_4:74211727-74211746 Msa0184640:intron 25.0%
! TATATTGGACAAAAATGGAA+GGG - chr1_4:74211864-74211883 None:intergenic 25.0%
! ATATATTGGACAAAAATGGA+AGG - chr1_4:74211865-74211884 None:intergenic 25.0%
! ATATACATGTTGTTACACAT+AGG - chr1_4:74212070-74212089 None:intergenic 25.0%
!! CTTTTATTGGATTGAAATCA+AGG - chr1_4:74212384-74212403 None:intergenic 25.0%
! ATTTCAATCCAATAAAAGAG+TGG + chr1_4:74212386-74212405 Msa0184640:intron 25.0%
! TTTCAATCCAATAAAAGAGT+GGG + chr1_4:74212387-74212406 Msa0184640:intron 25.0%
!! GTTGACAAATAACTTTTTAG+AGG - chr1_4:74212452-74212471 None:intergenic 25.0%
! CAAACAAACAACTCATTTAA+TGG + chr1_4:74212688-74212707 Msa0184640:intron 25.0%
!! CATTTTGTTGAATTTTACAG+TGG + chr1_4:74213094-74213113 Msa0184640:intron 25.0%
! ATTAATTGACAGTTACCAAA+AGG - chr1_4:74213321-74213340 None:intergenic 25.0%
! TAATTGCGACCAAAATAATA+TGG + chr1_4:74213351-74213370 Msa0184640:CDS 25.0%
!! ACAATAACATTGATAGTACA+TGG + chr1_4:74213386-74213405 Msa0184640:CDS 25.0%
! AGTTCAACATAATTAAGCAT+AGG - chr1_4:74213547-74213566 None:intergenic 25.0%
! ATGCTTAATTATGTTGAACT+TGG + chr1_4:74213547-74213566 Msa0184640:CDS 25.0%
ATTGAAGAAGTGATGTTGAT+TGG - chr1_4:74207153-74207172 None:intergenic 30.0%
ATCAACATCACTTCTTCAAT+CGG + chr1_4:74207153-74207172 Msa0184640:CDS 30.0%
!!! GAGCTTCATTTCTAGAATTT+TGG - chr1_4:74207203-74207222 None:intergenic 30.0%
AGTTACTTCTTCTTTGTTGA+TGG - chr1_4:74207257-74207276 None:intergenic 30.0%
ATTCAAGAAATGGAATCGTA+GGG + chr1_4:74207297-74207316 Msa0184640:intron 30.0%
! CATCAATTTGTGATGTTTTC+AGG + chr1_4:74207406-74207425 Msa0184640:intron 30.0%
GTAAGATCTCACATTTCAAA+AGG - chr1_4:74207567-74207586 None:intergenic 30.0%
GTAATACTGTCCAAATACAT+TGG + chr1_4:74207710-74207729 Msa0184640:intron 30.0%
CATAAAATATGATAGGTCCT+TGG - chr1_4:74207797-74207816 None:intergenic 30.0%
AATTTAAAGACGTACTCCAT+CGG - chr1_4:74207880-74207899 None:intergenic 30.0%
GAAATTGGATCAGTACAATT+TGG - chr1_4:74208141-74208160 None:intergenic 30.0%
! ATTTTATATACACAGTGCAC+TGG - chr1_4:74208304-74208323 None:intergenic 30.0%
! TTTCTTGTTGGTTGAACTAA+TGG + chr1_4:74208340-74208359 Msa0184640:intron 30.0%
TCTTAGATTGAAATGTTCAC+AGG + chr1_4:74208387-74208406 Msa0184640:intron 30.0%
CAAAATCATTAGGAATTGAG+AGG - chr1_4:74208560-74208579 None:intergenic 30.0%
! GTTGCTTTGTCAAAATCATT+AGG - chr1_4:74208570-74208589 None:intergenic 30.0%
TTCTGAATCTTCAAGAGAAT+CGG + chr1_4:74208743-74208762 Msa0184640:CDS 30.0%
! AAGTTTTCTATCACCACTTT+TGG - chr1_4:74209325-74209344 None:intergenic 30.0%
! GTGGTGATAGAAAACTTTTA+AGG + chr1_4:74209328-74209347 Msa0184640:intron 30.0%
!! TGTTTTTGAACTTTTTGGTC+GGG + chr1_4:74209445-74209464 Msa0184640:intron 30.0%
TGATCAAGTGTTTATAAGTG+GGG - chr1_4:74209514-74209533 None:intergenic 30.0%
CATGATCAAGTGTTTATAAG+TGG - chr1_4:74209516-74209535 None:intergenic 30.0%
TGTCATCTCTTAACAAATGT+AGG + chr1_4:74209534-74209553 Msa0184640:intron 30.0%
AATGTTACAAAGTCTGACAT+TGG - chr1_4:74209713-74209732 None:intergenic 30.0%
TCTTGAATTAAACAACCAGA+GGG - chr1_4:74210003-74210022 None:intergenic 30.0%
TTCTTGAATTAAACAACCAG+AGG - chr1_4:74210004-74210023 None:intergenic 30.0%
GTATTGTATGATGTTGAGAA+TGG + chr1_4:74210088-74210107 Msa0184640:intron 30.0%
! TGTTAAATACATGGTTTGCA+TGG - chr1_4:74210138-74210157 None:intergenic 30.0%
!!! TTTTTTTCTAGTTCCCTCTA+CGG + chr1_4:74210873-74210892 Msa0184640:intron 30.0%
AGTCTTCAATGACAGTTTAT+TGG + chr1_4:74210912-74210931 Msa0184640:intron 30.0%
GTCTTCAATGACAGTTTATT+GGG + chr1_4:74210913-74210932 Msa0184640:intron 30.0%
! AATGAATAAGACAAAAGTGC+AGG - chr1_4:74211118-74211137 None:intergenic 30.0%
! TTAGTGTTGGAACTTCTATT+TGG + chr1_4:74211410-74211429 Msa0184640:CDS 30.0%
TGAGATTCATTTCATTTGCT+AGG - chr1_4:74211600-74211619 None:intergenic 30.0%
ATGAATCTCAACAAAATCAC+AGG + chr1_4:74211610-74211629 Msa0184640:intron 30.0%
TGAATCTCAACAAAATCACA+GGG + chr1_4:74211611-74211630 Msa0184640:intron 30.0%
CATAAATGTCACCCAATATA+AGG - chr1_4:74211698-74211717 None:intergenic 30.0%
ATATTGGGTGACATTTATGA+TGG + chr1_4:74211699-74211718 Msa0184640:intron 30.0%
TATTGGGTGACATTTATGAT+GGG + chr1_4:74211700-74211719 Msa0184640:intron 30.0%
!! AATTTTTCCATGATGGGAAA+AGG + chr1_4:74211733-74211752 Msa0184640:intron 30.0%
AAGAAAGAGATAGTCCATTA+GGG - chr1_4:74211904-74211923 None:intergenic 30.0%
AAAGAAAGAGATAGTCCATT+AGG - chr1_4:74211905-74211924 None:intergenic 30.0%
!!! TTTTTTTTGAGCAACCCAAT+AGG - chr1_4:74212280-74212299 None:intergenic 30.0%
TTATTGGATTGAAATCAAGG+TGG - chr1_4:74212381-74212400 None:intergenic 30.0%
!! AACTTTTTAGAGGAGTGATA+TGG - chr1_4:74212442-74212461 None:intergenic 30.0%
TCCTTCATTTCGATAAAGAA+CGG + chr1_4:74212760-74212779 Msa0184640:intron 30.0%
! GTTCTTAATTTTCCCATGAT+GGG - chr1_4:74213001-74213020 None:intergenic 30.0%
GCTACTTAGCTTCAATATAA+GGG - chr1_4:74213044-74213063 None:intergenic 30.0%
! TGCTACTTAGCTTCAATATA+AGG - chr1_4:74213045-74213064 None:intergenic 30.0%
TTCTTTAATTATACCCCCAA+CGG - chr1_4:74213130-74213149 None:intergenic 30.0%
! TGGGGGTATAATTAAAGAAA+TGG + chr1_4:74213131-74213150 Msa0184640:CDS 30.0%
!! TTTTCACCTAAAGTACCTTT+TGG + chr1_4:74213303-74213322 Msa0184640:intron 30.0%
TAACTGTCAATTAATTGCAG+AGG + chr1_4:74213326-74213345 Msa0184640:intron 30.0%
AACTGTCAATTAATTGCAGA+GGG + chr1_4:74213327-74213346 Msa0184640:intron 30.0%
TCTGTGAATGCAATCTTAAA+TGG + chr1_4:74213442-74213461 Msa0184640:CDS 30.0%
CTTAATTATGTTGAACTTGG+AGG + chr1_4:74213550-74213569 Msa0184640:CDS 30.0%
! TCATTTTCTACTCTTCTTGT+TGG - chr1_4:74213619-74213638 None:intergenic 30.0%
TAGTTAAGAACACAACCAAA+CGG + chr1_4:74213662-74213681 Msa0184640:CDS 30.0%
AACAGTGTCACATCAAAATG+TGG + chr1_4:74207083-74207102 Msa0184640:CDS 35.0%
CACTTCTTCAATCGGTTATT+TGG + chr1_4:74207161-74207180 Msa0184640:CDS 35.0%
! TACTTCTTCTTTGTTGATGG+TGG - chr1_4:74207254-74207273 None:intergenic 35.0%
GATTCAAGAAATGGAATCGT+AGG + chr1_4:74207296-74207315 Msa0184640:intron 35.0%
AAACAAGCGCAACCAAATTA+AGG + chr1_4:74207524-74207543 Msa0184640:CDS 35.0%
AATGTGAGATCTTACATGCA+CGG + chr1_4:74207572-74207591 Msa0184640:intron 35.0%
TTACTGATAACTGATACCGA+TGG + chr1_4:74207861-74207880 Msa0184640:intron 35.0%
! TGTACTGATCCAATTTCTAC+TGG + chr1_4:74208144-74208163 Msa0184640:CDS 35.0%
GACATTTCACCAGTAGAAAT+TGG - chr1_4:74208156-74208175 None:intergenic 35.0%
!! TCTAAGTTGATTGTCGTTAG+AGG - chr1_4:74208178-74208197 None:intergenic 35.0%
GAATGCTAGATTAAAGGTTG+AGG + chr1_4:74208203-74208222 Msa0184640:CDS 35.0%
AGTAAACGATGTAGATCTAG+TGG + chr1_4:74208416-74208435 Msa0184640:CDS 35.0%
GTAAACGATGTAGATCTAGT+GGG + chr1_4:74208417-74208436 Msa0184640:CDS 35.0%
ATCTACACCTGCATTTGAAA+TGG + chr1_4:74208464-74208483 Msa0184640:CDS 35.0%
! TCTACACCTGCATTTGAAAT+GGG + chr1_4:74208465-74208484 Msa0184640:CDS 35.0%
ATTGGTGGAAATCCATAAAG+GGG - chr1_4:74208652-74208671 None:intergenic 35.0%
CATTGGTGGAAATCCATAAA+GGG - chr1_4:74208653-74208672 None:intergenic 35.0%
TCATTGGTGGAAATCCATAA+AGG - chr1_4:74208654-74208673 None:intergenic 35.0%
! GTTTAGAATCTCAGTGTCAT+TGG - chr1_4:74208670-74208689 None:intergenic 35.0%
TAAACGAAGTTGAATACCCT+AGG + chr1_4:74208685-74208704 Msa0184640:CDS 35.0%
AAACGAAGTTGAATACCCTA+GGG + chr1_4:74208686-74208705 Msa0184640:CDS 35.0%
CATTGATATCCTTATGGATG+TGG + chr1_4:74208794-74208813 Msa0184640:CDS 35.0%
!!! GGCAATGATTTTAGAGTCAA+TGG + chr1_4:74208946-74208965 Msa0184640:intron 35.0%
CTTGAGATGACTTAAAAGCA+TGG + chr1_4:74209298-74209317 Msa0184640:intron 35.0%
! TTAAAAGCATGGACCAAAAG+TGG + chr1_4:74209309-74209328 Msa0184640:intron 35.0%
TCTAACACAACCACACAAAA+CGG + chr1_4:74209468-74209487 Msa0184640:intron 35.0%
GATCAAGTGTTTATAAGTGG+GGG - chr1_4:74209513-74209532 None:intergenic 35.0%
GTCAACCACAAATTCTTAGA+TGG - chr1_4:74209569-74209588 None:intergenic 35.0%
! AATCAGCTGACATCTGAAAT+AGG - chr1_4:74209837-74209856 None:intergenic 35.0%
!! TATTCTAAGAAGCACCAAGA+AGG + chr1_4:74209907-74209926 Msa0184640:CDS 35.0%
!! ATTCTAAGAAGCACCAAGAA+GGG + chr1_4:74209908-74209927 Msa0184640:CDS 35.0%
ACTACCAAATGGTTGTTCAA+AGG + chr1_4:74210023-74210042 Msa0184640:CDS 35.0%
CATACCTTTGAACAACCATT+TGG - chr1_4:74210030-74210049 None:intergenic 35.0%
! TAAATACATGGTTTGCATGG+TGG - chr1_4:74210135-74210154 None:intergenic 35.0%
TTCACATTGTCTACCTAATG+AGG - chr1_4:74210356-74210375 None:intergenic 35.0%
TCCAAACAAAAAACCGTAGA+GGG - chr1_4:74210889-74210908 None:intergenic 35.0%
ATCCAAACAAAAAACCGTAG+AGG - chr1_4:74210890-74210909 None:intergenic 35.0%
TCAGAACATATACGACATCA+TGG + chr1_4:74210954-74210973 Msa0184640:intron 35.0%
CACATATATGCAATACACAG+TGG + chr1_4:74211201-74211220 Msa0184640:intron 35.0%
ACAGTGGTAAATAGTCTTCA+AGG + chr1_4:74211217-74211236 Msa0184640:intron 35.0%
TGGTAAATAGTCTTCAAGGA+AGG + chr1_4:74211221-74211240 Msa0184640:intron 35.0%
ATCTGATTGTGACGATGTAA+GGG + chr1_4:74211336-74211355 Msa0184640:CDS 35.0%
GTCATGACCAAAACAAGTAT+TGG + chr1_4:74211358-74211377 Msa0184640:CDS 35.0%
! AGGTTCACCAATACTTGTTT+TGG - chr1_4:74211368-74211387 None:intergenic 35.0%
!! AAAACAAGTATTGGTGAACC+TGG + chr1_4:74211367-74211386 Msa0184640:CDS 35.0%
ACACTAAGAACAATACCAGT+AGG - chr1_4:74211397-74211416 None:intergenic 35.0%
ACTGGTATTGTTCTTAGTGT+TGG + chr1_4:74211397-74211416 Msa0184640:CDS 35.0%
AGAAAATCAAAAAGCCTCCT+TGG - chr1_4:74211448-74211467 None:intergenic 35.0%
!!! AGGAGGCTTTTTGATTTTCT+TGG + chr1_4:74211448-74211467 Msa0184640:CDS 35.0%
! TCATTTCATTTGCTAGGACA+TGG - chr1_4:74211594-74211613 None:intergenic 35.0%
GAATCTCAACAAAATCACAG+GGG + chr1_4:74211612-74211631 Msa0184640:intron 35.0%
! TATTTGACCTTTTCCCATCA+TGG - chr1_4:74211743-74211762 None:intergenic 35.0%
AGAAACATTCATCCTCCTAT+TGG + chr1_4:74212262-74212281 Msa0184640:intron 35.0%
GAAACATTCATCCTCCTATT+GGG + chr1_4:74212263-74212282 Msa0184640:intron 35.0%
! TCTAACACCCACTCTTTTAT+TGG - chr1_4:74212397-74212416 None:intergenic 35.0%
CGAAATGAAGGATTTAGTGA+AGG - chr1_4:74212752-74212771 None:intergenic 35.0%
ACCGTTCTTTATCGAAATGA+AGG - chr1_4:74212764-74212783 None:intergenic 35.0%
ATAGAACAAACTGGTTGTAC+CGG + chr1_4:74212952-74212971 Msa0184640:intron 35.0%
GCTGAATTAACAGTTATAGC+CGG - chr1_4:74212974-74212993 None:intergenic 35.0%
! TAATTCAGCTTTTCCCATCA+TGG + chr1_4:74212985-74213004 Msa0184640:intron 35.0%
! AATTCAGCTTTTCCCATCAT+GGG + chr1_4:74212986-74213005 Msa0184640:intron 35.0%
! GGTTCTTAATTTTCCCATGA+TGG - chr1_4:74213002-74213021 None:intergenic 35.0%
! CAATATAAGGGTGCAAGTTA+TGG - chr1_4:74213032-74213051 None:intergenic 35.0%
GAAATGGAACACATAACACA+TGG + chr1_4:74213147-74213166 Msa0184640:CDS 35.0%
TTCATGTCAGCGTAAGTAAT+TGG + chr1_4:74213199-74213218 Msa0184640:intron 35.0%
!! CAGTTACCAAAAGGTACTTT+AGG - chr1_4:74213312-74213331 None:intergenic 35.0%
TTGCGACCAAAATAATATGG+TGG + chr1_4:74213354-74213373 Msa0184640:CDS 35.0%
!! GAAGCACCACCATATTATTT+TGG - chr1_4:74213363-74213382 None:intergenic 35.0%
! GTCACATGTTATTTATGCTC+CGG + chr1_4:74213408-74213427 Msa0184640:CDS 35.0%
! ATTTATGCTCCGGTTGATAT+TGG + chr1_4:74213418-74213437 Msa0184640:CDS 35.0%
TTCACAGAACCAATATCAAC+CGG - chr1_4:74213430-74213449 None:intergenic 35.0%
GTGAATGCAATCTTAAATGG+TGG + chr1_4:74213445-74213464 Msa0184640:CDS 35.0%
GGAAGCAAAGCAACAAAATT+TGG - chr1_4:74213475-74213494 None:intergenic 35.0%
!!! TTTTGTTATTCTCCCCGATA+GGG + chr1_4:74213501-74213520 Msa0184640:CDS 35.0%
ATAATTAAGCATAGGTCCTG+TGG - chr1_4:74213539-74213558 None:intergenic 35.0%
!! TGTTGTTGGTGTACTGATTG+AGG - chr1_4:74207117-74207136 None:intergenic 40.0%
GCATGTCTCGAAATTGTTGT+TGG - chr1_4:74207131-74207150 None:intergenic 40.0%
!! CTTCTTTGTTGATGGTGGTT+AGG - chr1_4:74207249-74207268 None:intergenic 40.0%
GTTTCCTTTGCTTGCCATTA+GGG - chr1_4:74207452-74207471 None:intergenic 40.0%
TGTTTCCTTTGCTTGCCATT+AGG - chr1_4:74207453-74207472 None:intergenic 40.0%
TGGCAAGCAAAGGAAACAAT+TGG + chr1_4:74207455-74207474 Msa0184640:CDS 40.0%
GGCAAGCAAAGGAAACAATT+GGG + chr1_4:74207456-74207475 Msa0184640:CDS 40.0%
! AAACAATTGGGTTGTGAGCT+AGG + chr1_4:74207468-74207487 Msa0184640:CDS 40.0%
!! AACCAGAACTTGATTTGCGT+AGG - chr1_4:74207501-74207520 None:intergenic 40.0%
GCGCAACCAAATTAAGGTAA+AGG + chr1_4:74207530-74207549 Msa0184640:intron 40.0%
TGAACTTAACTCAGCTGGTA+TGG - chr1_4:74207826-74207845 None:intergenic 40.0%
TATATGCATGCAGACACAAC+AGG + chr1_4:74208023-74208042 Msa0184640:intron 40.0%
TTATATACACAGTGCACTGG+AGG - chr1_4:74208301-74208320 None:intergenic 40.0%
!! AACGATTGTAGAACTTGCTG+TGG + chr1_4:74208587-74208606 Msa0184640:CDS 40.0%
!! AGAACTTGCTGTGGTTTCTA+TGG + chr1_4:74208596-74208615 Msa0184640:CDS 40.0%
CTCACAATGTTAACTCTTGC+TGG + chr1_4:74208624-74208643 Msa0184640:CDS 40.0%
! TAGAATCTCAGTGTCATTGG+TGG - chr1_4:74208667-74208686 None:intergenic 40.0%
!! GACTTTTGGGAAAAACCCTA+GGG - chr1_4:74208704-74208723 None:intergenic 40.0%
GAATTTAACCCCGTGAGTTT+CGG - chr1_4:74208726-74208745 None:intergenic 40.0%
TGTTACTCACCACATCCATA+AGG - chr1_4:74208806-74208825 None:intergenic 40.0%
ACACTTGAAGTTCTATCACC+TGG + chr1_4:74209005-74209024 Msa0184640:CDS 40.0%
ATACAATGGAGCTCTACAAG+TGG + chr1_4:74209040-74209059 Msa0184640:CDS 40.0%
! AAAGTCTGACATTGGTTGAG+AGG - chr1_4:74209705-74209724 None:intergenic 40.0%
!! TCAGATGTCAGCTGATTTTC+AGG + chr1_4:74209840-74209859 Msa0184640:intron 40.0%
! ACGAAATAGTTTTCACGAGC+AGG - chr1_4:74209883-74209902 None:intergenic 40.0%
ATGTACTACTACTTGGTTGC+AGG - chr1_4:74209966-74209985 None:intergenic 40.0%
CGTGTCAATGTACTACTACT+TGG - chr1_4:74209973-74209992 None:intergenic 40.0%
!! ATAACTTCTGGTCTTGCCTT+TGG + chr1_4:74210313-74210332 Msa0184640:CDS 40.0%
GTCTTCTACAGGTATGTTGT+TGG - chr1_4:74210398-74210417 None:intergenic 40.0%
ATACCTGTAGAAGACCATTG+TGG + chr1_4:74210403-74210422 Msa0184640:CDS 40.0%
!!! TCCCTCTACGGTTTTTTGTT+TGG + chr1_4:74210885-74210904 Msa0184640:intron 40.0%
TCTGATAAATTCCCTCTACG+TGG - chr1_4:74210939-74210958 None:intergenic 40.0%
!! AAGGAAGAGTTTGCTGGATT+TGG + chr1_4:74211240-74211259 Msa0184640:intron 40.0%
!! GTATGTTTTTATGCTGCCGT+TGG + chr1_4:74211280-74211299 Msa0184640:intron 40.0%
CATCTGATTGTGACGATGTA+AGG + chr1_4:74211335-74211354 Msa0184640:CDS 40.0%
! TGGAACTTCTATTTGGCTTC+CGG + chr1_4:74211417-74211436 Msa0184640:CDS 40.0%
!!! TTTTTTACTTAGACAGGCCG+CGG - chr1_4:74211943-74211962 None:intergenic 40.0%
!! TTTTTGAGCAACCCAATAGG+AGG - chr1_4:74212277-74212296 None:intergenic 40.0%
TCACATGAGTTTCACCCAAT+AGG - chr1_4:74212316-74212335 None:intergenic 40.0%
AAGAACGGTATGTGTAGACT+CGG + chr1_4:74212775-74212794 Msa0184640:intron 40.0%
! ATAAGGGTGCAAGTTATGGT+GGG - chr1_4:74213028-74213047 None:intergenic 40.0%
! TATAAGGGTGCAAGTTATGG+TGG - chr1_4:74213029-74213048 None:intergenic 40.0%
ATAACACATGGTCGTGATCT+TGG + chr1_4:74213159-74213178 Msa0184640:CDS 40.0%
GGGAGAATAACAAAACCAGA+GGG - chr1_4:74213496-74213515 None:intergenic 40.0%
!!! GTTTTGTTATTCTCCCCGAT+AGG + chr1_4:74213500-74213519 Msa0184640:CDS 40.0%
TCTACTCTTCTTGTTGGACT+TGG - chr1_4:74213613-74213632 None:intergenic 40.0%
!! CAATGCTACTTTGATCCGTT+TGG - chr1_4:74213680-74213699 None:intergenic 40.0%
CAAACGGATCAAAGTAGCAT+TGG + chr1_4:74213678-74213697 Msa0184640:CDS 40.0%
GTTAGGATCTTGGTCTCGAA+GGG - chr1_4:74207232-74207251 None:intergenic 45.0%
!! GTTGATGGTGGTTAGGATCT+TGG - chr1_4:74207242-74207261 None:intergenic 45.0%
TTTGCTTGCCATTAGGGAGA+GGG - chr1_4:74207446-74207465 None:intergenic 45.0%
CACCTACGCAAATCAAGTTC+TGG + chr1_4:74207496-74207515 Msa0184640:CDS 45.0%
TAGGTCCTTGGTTCAAACTC+TGG - chr1_4:74207785-74207804 None:intergenic 45.0%
CATCGTGAACTTAACTCAGC+TGG - chr1_4:74207831-74207850 None:intergenic 45.0%
AGATTGAAGTGCGCACACTT+TGG + chr1_4:74207944-74207963 Msa0184640:intron 45.0%
CCACTTCCCATTTCAAATGC+AGG - chr1_4:74208474-74208493 None:intergenic 45.0%
! CCTGCATTTGAAATGGGAAG+TGG + chr1_4:74208471-74208490 Msa0184640:CDS 45.0%
!! ACTTGCTGTGGTTTCTATGG+AGG + chr1_4:74208599-74208618 Msa0184640:CDS 45.0%
!! GGACTTTTGGGAAAAACCCT+AGG - chr1_4:74208705-74208724 None:intergenic 45.0%
TCCCAAAAGTCCGAAACTCA+CGG + chr1_4:74208713-74208732 Msa0184640:CDS 45.0%
! TTCTATCACCTGGAGTGTCA+GGG + chr1_4:74209015-74209034 Msa0184640:CDS 45.0%
TTGTATTTCCCTGACACTCC+AGG - chr1_4:74209026-74209045 None:intergenic 45.0%
! GGAGTGTCAGGGAAATACAA+TGG + chr1_4:74209026-74209045 Msa0184640:CDS 45.0%
! AACCACACAAAACGGACTTG+TGG + chr1_4:74209476-74209495 Msa0184640:intron 45.0%
! GGACTAGTGTTCAAAAGTGG+AGG - chr1_4:74209681-74209700 None:intergenic 45.0%
!! GGTGGACTAGTGTTCAAAAG+TGG - chr1_4:74209684-74209703 None:intergenic 45.0%
!!! TTTTCAGGTTCCTTCACCAC+TGG + chr1_4:74209855-74209874 Msa0184640:CDS 45.0%
!! AGAAGCACCAAGAAGGGATA+TGG + chr1_4:74209914-74209933 Msa0184640:CDS 45.0%
! GAAGCACCAAGAAGGGATAT+GGG + chr1_4:74209915-74209934 Msa0184640:CDS 45.0%
ATGGGTAGAGCATGTAGAAG+TGG + chr1_4:74210249-74210268 Msa0184640:CDS 45.0%
!! TTGCCTTTGGAGCTAAGAGA+TGG + chr1_4:74210326-74210345 Msa0184640:CDS 45.0%
!! TGCCTTTGGAGCTAAGAGAT+GGG + chr1_4:74210327-74210346 Msa0184640:CDS 45.0%
AAGAGATGGGTGACCTCATT+AGG + chr1_4:74210340-74210359 Msa0184640:CDS 45.0%
ACACCACAATGGTCTTCTAC+AGG - chr1_4:74210409-74210428 None:intergenic 45.0%
AGTTTATTGGGCCACGTAGA+GGG + chr1_4:74210925-74210944 Msa0184640:intron 45.0%
TCAAGGAAGGAAGAGTTTGC+TGG + chr1_4:74211234-74211253 Msa0184640:intron 45.0%
ACTAGCTACAGAAGGACCAA+CGG - chr1_4:74211299-74211318 None:intergenic 45.0%
TCCTTCTGTAGCTAGTTGCT+GGG + chr1_4:74211303-74211322 Msa0184640:intron 45.0%
ACAATACCAGTAGGTGTTCC+AGG - chr1_4:74211388-74211407 None:intergenic 45.0%
AAAAGCCTCCTTGGAACAAC+CGG - chr1_4:74211439-74211458 None:intergenic 45.0%
GATGGCCTAGATGTGAGATT+GGG + chr1_4:74211789-74211808 Msa0184640:intron 45.0%
AGGTACCCAATCTCACATCT+AGG - chr1_4:74211797-74211816 None:intergenic 45.0%
CATGAGTTTCACCCAATAGG+AGG - chr1_4:74212313-74212332 None:intergenic 45.0%
TCAATTCCGCGTGATTTCAC+CGG + chr1_4:74212804-74212823 Msa0184640:intron 45.0%
TTAATGCCGGTGAAATCACG+CGG - chr1_4:74212813-74212832 None:intergenic 45.0%
AGTGGGATGTTCTTTCCGTT+GGG + chr1_4:74213112-74213131 Msa0184640:intron 45.0%
!! TTTGTTGCTTTGCTTCCCTC+TGG + chr1_4:74213478-74213497 Msa0184640:CDS 45.0%
GGGGAGAATAACAAAACCAG+AGG - chr1_4:74213497-74213516 None:intergenic 45.0%
TTCTCAATTGTGCCCTATCG+GGG - chr1_4:74213516-74213535 None:intergenic 45.0%
GTTCTCAATTGTGCCCTATC+GGG - chr1_4:74213517-74213536 None:intergenic 45.0%
GGTTCTCAATTGTGCCCTAT+CGG - chr1_4:74213518-74213537 None:intergenic 45.0%
!! TAAAAAAAAAAAAAAAAAGT+GGG - chr1_4:74209649-74209668 None:intergenic 5.0%
!! TTAAAAAAAAAAAAAAAAAG+TGG - chr1_4:74209650-74209669 None:intergenic 5.0%
!!! ACTTTTTTTTTTTTTTTTTA+AGG + chr1_4:74209649-74209668 Msa0184640:intron 5.0%
!!! CTTTTTTTTTTTTTTTTTAA+GGG + chr1_4:74209650-74209669 Msa0184640:intron 5.0%
!! AAAAAAAATAAAAAAATTGA+AGG - chr1_4:74210194-74210213 None:intergenic 5.0%
GGTTAGGATCTTGGTCTCGA+AGG - chr1_4:74207233-74207252 None:intergenic 50.0%
CTTTGCTTGCCATTAGGGAG+AGG - chr1_4:74207447-74207466 None:intergenic 50.0%
CTCTCCCTAATGGCAAGCAA+AGG + chr1_4:74207445-74207464 Msa0184640:CDS 50.0%
TGTGATGGCAATGACCCCTT+AGG + chr1_4:74208531-74208550 Msa0184640:CDS 50.0%
GTGATGGCAATGACCCCTTA+GGG + chr1_4:74208532-74208551 Msa0184640:CDS 50.0%
GAATTGAGAGGGACCCTAAG+GGG - chr1_4:74208548-74208567 None:intergenic 50.0%
GGAATTGAGAGGGACCCTAA+GGG - chr1_4:74208549-74208568 None:intergenic 50.0%
AGGAATTGAGAGGGACCCTA+AGG - chr1_4:74208550-74208569 None:intergenic 50.0%
CTCTTGCTGGATCCCCTTTA+TGG + chr1_4:74208637-74208656 Msa0184640:CDS 50.0%
! CCCGTGAGTTTCGGACTTTT+GGG - chr1_4:74208717-74208736 None:intergenic 50.0%
CCCAAAAGTCCGAAACTCAC+GGG + chr1_4:74208714-74208733 Msa0184640:CDS 50.0%
CCAAAAGTCCGAAACTCACG+GGG + chr1_4:74208715-74208734 Msa0184640:CDS 50.0%
! GTTCTATCACCTGGAGTGTC+AGG + chr1_4:74209014-74209033 Msa0184640:CDS 50.0%
! CACCACAAGTCCGTTTTGTG+TGG - chr1_4:74209481-74209500 None:intergenic 50.0%
! GTCTGACATTGGTTGAGAGG+TGG - chr1_4:74209702-74209721 None:intergenic 50.0%
! TTTTCACGAGCAGGAACCAG+TGG - chr1_4:74209874-74209893 None:intergenic 50.0%
! GGCAGTGGTTGATGTTTCCT+TGG + chr1_4:74209936-74209955 Msa0184640:CDS 50.0%
ACTTGGTTGCAGGTGATCCA+AGG - chr1_4:74209956-74209975 None:intergenic 50.0%
TGGCTGAGGTGGGAGATTTA+AGG - chr1_4:74210115-74210134 None:intergenic 50.0%
CACCCATCTCTTAGCTCCAA+AGG - chr1_4:74210332-74210351 None:intergenic 50.0%
CAGTTTATTGGGCCACGTAG+AGG + chr1_4:74210924-74210943 Msa0184640:intron 50.0%
GTCCTTCTGTAGCTAGTTGC+TGG + chr1_4:74211302-74211321 Msa0184640:intron 50.0%
TCCCAGCAACTAGCTACAGA+AGG - chr1_4:74211307-74211326 None:intergenic 50.0%
! TTTGGCTTCCGGTTGTTCCA+AGG + chr1_4:74211428-74211447 Msa0184640:CDS 50.0%
GGATGGCCTAGATGTGAGAT+TGG + chr1_4:74211788-74211807 Msa0184640:intron 50.0%
! GGTGCAAGTTATGGTGGGAA+GGG - chr1_4:74213023-74213042 None:intergenic 50.0%
CAGTGGGATGTTCTTTCCGT+TGG + chr1_4:74213111-74213130 Msa0184640:intron 50.0%
GTGGGATGTTCTTTCCGTTG+GGG + chr1_4:74213113-74213132 Msa0184640:intron 50.0%
TGGGATGTTCTTTCCGTTGG+GGG + chr1_4:74213114-74213133 Msa0184640:CDS 50.0%
AGGGCACAATTGAGAACCAC+AGG + chr1_4:74213520-74213539 Msa0184640:CDS 50.0%
GAGCAATGCCCTCTCCCTAA+TGG + chr1_4:74207435-74207454 Msa0184640:CDS 55.0%
GGTGGCCAGAGTTTGAACCA+AGG + chr1_4:74207777-74207796 Msa0184640:intron 55.0%
! CCCCGTGAGTTTCGGACTTT+TGG - chr1_4:74208718-74208737 None:intergenic 55.0%
CCACTGCCCATATCCCTTCT+TGG - chr1_4:74209924-74209943 None:intergenic 55.0%
CCAAGAAGGGATATGGGCAG+TGG + chr1_4:74209921-74209940 Msa0184640:CDS 55.0%
TTGACACGAAGACGACCCTC+TGG + chr1_4:74209985-74210004 Msa0184640:CDS 55.0%
GTTTGCATGGTGGCTGAGGT+GGG - chr1_4:74210125-74210144 None:intergenic 55.0%
! CATGGTTTGCATGGTGGCTG+AGG - chr1_4:74210129-74210148 None:intergenic 55.0%
GGTGAACCTGGAACACCTAC+TGG + chr1_4:74211379-74211398 Msa0184640:CDS 55.0%
! GGGTGCAAGTTATGGTGGGA+AGG - chr1_4:74213024-74213043 None:intergenic 55.0%
CGAGCAGGAACCAGTGGTGA+AGG - chr1_4:74209868-74209887 None:intergenic 60.0%
GGTTTGCATGGTGGCTGAGG+TGG - chr1_4:74210126-74210145 None:intergenic 60.0%
GGCTTCCGGTTGTTCCAAGG+AGG + chr1_4:74211431-74211450 Msa0184640:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 74207063 74213717 74207063 ID=Msa0184640;Name=Msa0184640
chr1_4 mRNA 74207063 74213717 74207063 ID=Msa0184640-mRNA-1;Parent=Msa0184640;Name=Msa0184640-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|10|0|703
chr1_4 exon 74207063 74207313 74207063 ID=Msa0184640-mRNA-1:exon:25279;Parent=Msa0184640-mRNA-1
chr1_4 exon 74207428 74207545 74207428 ID=Msa0184640-mRNA-1:exon:25280;Parent=Msa0184640-mRNA-1
chr1_4 exon 74208036 74208224 74208036 ID=Msa0184640-mRNA-1:exon:25281;Parent=Msa0184640-mRNA-1
chr1_4 exon 74208393 74208815 74208393 ID=Msa0184640-mRNA-1:exon:25282;Parent=Msa0184640-mRNA-1
chr1_4 exon 74208960 74209061 74208960 ID=Msa0184640-mRNA-1:exon:25283;Parent=Msa0184640-mRNA-1
chr1_4 exon 74209844 74210044 74209844 ID=Msa0184640-mRNA-1:exon:25284;Parent=Msa0184640-mRNA-1
chr1_4 exon 74210244 74210424 74210244 ID=Msa0184640-mRNA-1:exon:25285;Parent=Msa0184640-mRNA-1
chr1_4 exon 74211314 74211492 74211314 ID=Msa0184640-mRNA-1:exon:25286;Parent=Msa0184640-mRNA-1
chr1_4 exon 74213114 74213209 74213114 ID=Msa0184640-mRNA-1:exon:25287;Parent=Msa0184640-mRNA-1
chr1_4 exon 74213346 74213717 74213346 ID=Msa0184640-mRNA-1:exon:25288;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74207063 74207313 74207063 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74207428 74207545 74207428 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74208036 74208224 74208036 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74208393 74208815 74208393 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74208960 74209061 74208960 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74209844 74210044 74209844 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74210244 74210424 74210244 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74211314 74211492 74211314 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74213114 74213209 74213114 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
chr1_4 CDS 74213346 74213717 74213346 ID=Msa0184640-mRNA-1:cds;Parent=Msa0184640-mRNA-1
Gene Sequence

>Msa0184640

ATGGTTGAGGATGAACAACAAACAGTGTCACATCAAAATGTGGTTGATCATCCTCAATCAGTACACCAACAACAATTTCGAGACATGCCAATCAACATCACTTCTTCAATCGGTTATTTGGAAAGATGTAATCAGAACCAAAATTCTAGAAATGAAGCTCTTTCTTCCCTTCGAGACCAAGATCCTAACCACCATCAACAAAGAAGAAGTAACTTTCGACACTCACAAAAACAGATTCAAGAAATGGAATCGTTCTTCGAGCAATGCCCTCTCCCTAATGGCAAGCAAAGGAAACAATTGGGTTGTGAGCTAGGTCTTACACCTACGCAAATCAAGTTCTGGTTTCAAAACAAGCGCAACCAAATTAAGACACAACAGGAACTTCATCAAAATGATCTTTTGAGGGATGAGAATGAGAAGCTTCGTGCTGAAAATGAGATTTATAAGGGGGCACTAAAAGACTCTTTATGTCCAAATTGTACTGATCCAATTTCTACTGGTGAAATGTCCTCTAACGACAATCAACTTAGAATTGAGAATGCTAGATTAAAGGTTGAGATTGAAATGTTCACAGGAAAGTTAGTAAACGATGTAGATCTAGTGGGTTCCTCCTCTAAAATTGATCAAATATCTACACCTGCATTTGAAATGGGAAGTGGTAGTGATATCTCTTCAAGCATGATAGAAGAATTGTATTGTGATGGCAATGACCCCTTAGGGTCCCTCTCAATTCCTAATGATTTTGACAAAGCAACGATTGTAGAACTTGCTGTGGTTTCTATGGAGGAACTCACAATGTTAACTCTTGCTGGATCCCCTTTATGGATTTCCACCAATGACACTGAGATTCTAAACGAAGTTGAATACCCTAGGGTTTTTCCCAAAAGTCCGAAACTCACGGGGTTAAATTCTGAATCTTCAAGAGAATCGGTTATTGTTTCCATGAGTCATATTAATCTCATTGATATCCTTATGGATGTGAGTCAATGGTCAACTATGTTTCATGCGATTGTTTCAAAAGCATTGACACTTGAAGTTCTATCACCTGGAGTGTCAGGGAAATACAATGGAGCTCTACAAGTGATGTCAGCTGATTTTCAGGTTCCTTCACCACTGGTTCCTGCTCGTGAAAACTATTTCGTTAGATATTCTAAGAAGCACCAAGAAGGGATATGGGCAGTGGTTGATGTTTCCTTGGATCACCTGCAACCAAGTAGTAGTACATTGACACGAAGACGACCCTCTGGTTGTTTAATTCAAGAACTACCAAATGGTTGTTCAAAGGTTACATGGGTAGAGCATGTAGAAGTGGATGAAAACACAATAGTGTCAAATCCATTCTATAAATCTTTAATAACTTCTGGTCTTGCCTTTGGAGCTAAGAGATGGGTGACCTCATTAGGTAGACAATGTGAACGTCTTGCTTCTTCAATGACCAACAACATACCTGTAGAAGACCATTGTGCTAGTTGCTGGGAAGTGTTAACATCTGATTGTGACGATGTAAGGGTCATGACCAAAACAAGTATTGGTGAACCTGGAACACCTACTGGTATTGTTCTTAGTGTTGGAACTTCTATTTGGCTTCCGGTTGTTCCAAGGAGGCTTTTTGATTTTCTTGGAAATCAAAATTCAAGAAGTGAGTGGGATGTTCTTTCCGTTGGGGGTATAATTAAAGAAATGGAACACATAACACATGGTCGTGATCTTGGAAACTATGTCTCTTTATTTCATGTCAGCAGGGCTAATTGCGACCAAAATAATATGGTGGTGCTTCAAGACAATAACATTGATAGTACATGGTCACATGTTATTTATGCTCCGGTTGATATTGGTTCTGTGAATGCAATCTTAAATGGTGGTGATCCAAATTTTGTTGCTTTGCTTCCCTCTGGTTTTGTTATTCTCCCCGATAGGGCACAATTGAGAACCACAGGACCTATGCTTAATTATGTTGAACTTGGAGGTTGTCTATTGACAATTTCATTTCAATTTTTAGTTGATCCAAGTCCAACAAGAAGAGTAGAAAATGACTCAATAGAATTTGCTGTCAAATTAGTTAAGAACACAACCAAACGGATCAAAGTAGCATTGGTCGATAGCAACACCTAA
Protein sequence

>Msa0184640

MVEDEQQTVSHQNVVDHPQSVHQQQFRDMPINITSSIGYLERCNQNQNSRNEALSSLRDQDPNHHQQRRSNFRHSQKQIQEMESFFEQCPLPNGKQRKQLGCELGLTPTQIKFWFQNKRNQIKTQQELHQNDLLRDENEKLRAENEIYKGALKDSLCPNCTDPISTGEMSSNDNQLRIENARLKVEIEMFTGKLVNDVDLVGSSSKIDQISTPAFEMGSGSDISSSMIEELYCDGNDPLGSLSIPNDFDKATIVELAVVSMEELTMLTLAGSPLWISTNDTEILNEVEYPRVFPKSPKLTGLNSESSRESVIVSMSHINLIDILMDVSQWSTMFHAIVSKALTLEVLSPGVSGKYNGALQVMSADFQVPSPLVPARENYFVRYSKKHQEGIWAVVDVSLDHLQPSSSTLTRRRPSGCLIQELPNGCSKVTWVEHVEVDENTIVSNPFYKSLITSGLAFGAKRWVTSLGRQCERLASSMTNNIPVEDHCASCWEVLTSDCDDVRVMTKTSIGEPGTPTGIVLSVGTSIWLPVVPRRLFDFLGNQNSRSEWDVLSVGGIIKEMEHITHGRDLGNYVSLFHVSRANCDQNNMVVLQDNNIDSTWSHVIYAPVDIGSVNAILNGGDPNFVALLPSGFVILPDRAQLRTTGPMLNYVELGGCLLTISFQFLVDPSPTRRVENDSIEFAVKLVKNTTKRIKVALVDSNT*