AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0184760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184760 MtrunA17_Chr1g0205751 99.432 704 4 0 1 704 1 704 0.0 1429
Msa0184760 MtrunA17_Chr5g0394261 84.993 693 102 1 12 702 7 699 0.0 1174
Msa0184760 MtrunA17_Chr7g0259851 63.930 682 238 4 18 698 11 685 0.0 851
Msa0184760 MtrunA17_Chr1g0149211 27.179 390 252 13 137 508 104 479 5.64e-19 91.3
Msa0184760 MtrunA17_Chr7g0259501 31.288 163 92 3 517 664 187 344 1.17e-16 82.8
Msa0184760 MtrunA17_Chr1g0152561 26.000 250 177 3 295 536 74 323 8.18e-16 79.7
Msa0184760 MtrunA17_Chr3g0106931 30.978 184 125 2 194 377 549 730 2.80e-15 80.1
Msa0184760 MtrunA17_Chr1g0185861 31.098 164 89 4 519 664 191 348 2.99e-15 78.6
Msa0184760 MtrunA17_Chr5g0440341 26.020 196 123 6 524 700 183 375 7.12e-13 71.2
Msa0184760 MtrunA17_Chr4g0031431 30.769 195 131 4 198 391 353 544 3.66e-12 69.7
Msa0184760 MtrunA17_Chr7g0261371 28.270 237 161 4 175 411 497 724 6.66e-12 68.9
Msa0184760 MtrunA17_Chr4g0074371 24.138 319 217 10 59 372 47 345 1.97e-11 66.6
Msa0184760 MtrunA17_Chr1g0199321 30.928 194 132 2 198 391 345 536 7.36e-11 65.5
Msa0184760 MtrunA17_Chr4g0044411 27.778 198 141 2 198 395 373 568 9.19e-11 65.1
Msa0184760 MtrunA17_Chr3g0084371 25.161 310 202 8 220 513 238 533 9.80e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184760 AT5G19330.1 79.315 701 141 2 4 702 6 704 0.0 1100
Msa0184760 AT5G19330.2 73.231 650 115 7 4 645 6 604 0.0 874
Msa0184760 AT5G13060.1 62.121 660 248 2 39 697 68 726 0.0 835
Msa0184760 AT3G06190.5 32.022 178 99 4 522 681 182 355 1.58e-17 85.5
Msa0184760 AT3G06190.1 32.298 161 88 3 522 664 182 339 8.28e-17 83.6
Msa0184760 AT5G19000.1 29.747 158 96 2 522 664 183 340 2.20e-14 76.3
Msa0184760 AT5G19000.3 29.747 158 96 2 522 664 183 340 2.20e-14 76.3
Msa0184760 AT3G03740.1 31.126 151 87 2 533 667 210 359 4.53e-14 75.9
Msa0184760 AT3G43700.3 34.694 147 77 4 539 667 205 350 1.09e-13 73.6
Msa0184760 AT3G43700.2 34.694 147 77 4 539 667 205 350 1.12e-13 73.6
Msa0184760 AT2G23140.1 30.978 184 125 2 194 377 542 723 1.16e-13 75.1
Msa0184760 AT2G23140.2 30.978 184 125 2 194 377 539 720 1.22e-13 75.1
Msa0184760 AT2G23140.4 30.978 184 125 2 194 377 539 720 1.22e-13 75.1
Msa0184760 AT3G43700.1 34.694 147 77 4 539 667 205 350 1.44e-13 73.9
Msa0184760 AT1G23030.1 29.740 269 179 8 140 402 272 536 2.35e-13 73.9
Msa0184760 AT2G23140.3 30.978 184 125 2 194 377 350 531 2.51e-13 73.9
Msa0184760 AT2G23140.5 30.978 184 125 2 194 377 350 531 2.51e-13 73.9
Msa0184760 AT3G46510.1 26.502 283 173 6 198 480 354 601 2.52e-13 73.9
Msa0184760 AT4G02150.1 25.407 307 202 11 72 372 139 424 4.74e-13 72.8
Msa0184760 AT3G01400.1 26.147 218 145 4 290 495 73 286 1.60e-12 70.1
Msa0184760 AT5G67340.1 25.714 280 185 7 146 411 364 634 2.25e-12 70.9
Msa0184760 AT5G67340.2 25.714 280 185 7 146 411 364 634 2.25e-12 70.9
Msa0184760 AT5G58680.1 24.569 232 163 3 288 509 69 298 3.15e-12 69.3
Msa0184760 AT4G02150.2 25.172 290 191 10 72 356 139 407 3.47e-12 69.3
Msa0184760 AT2G39760.1 32.143 140 77 2 540 664 195 331 2.05e-11 67.0
Msa0184760 AT2G39760.2 32.143 140 77 2 540 664 195 331 2.52e-11 66.2
Msa0184760 AT2G39760.4 32.143 140 77 2 540 664 195 331 3.12e-11 65.9
Msa0184760 AT2G39760.3 32.143 140 77 2 540 664 195 331 3.12e-11 65.9
Msa0184760 AT3G06720.1 22.500 320 221 9 59 372 123 421 4.90e-11 66.2
Msa0184760 AT3G06720.2 22.500 320 221 9 59 372 123 421 4.90e-11 66.2

Find 205 sgRNAs with CRISPR-Local

Find 610 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTTCCCATCTAATATT+TGG 0.076983 1_4:-74388798 None:intergenic
GCCGCTTCCCTCTGACTTTC+AGG 0.083665 1_4:-74384633 None:intergenic
CCCTTCTTCTCTCTCGTTCA+TGG 0.174906 1_4:+74381455 Msa0184760:exon
AATGCTGCTTTCGCTCTTTA+TGG 0.176465 1_4:+74385673 Msa0184760:CDS
ATTAAACTGCTGGGTAATTT+AGG 0.203631 1_4:+74390242 Msa0184760:three_prime_UTR
CTCTTATTCTTCCTCTCTAC+TGG 0.226379 1_4:-74390482 None:intergenic
GGTGCTTTACAACCAGTTAT+TGG 0.256939 1_4:+74384407 Msa0184760:CDS
AGACAGGGCCGAGGCTTTAT+TGG 0.273094 1_4:-74387295 None:intergenic
TGCCTTTGCATTGGGGAGAT+TGG 0.285881 1_4:+74385232 Msa0184760:CDS
TCACTGCAGATTACAGTCTA+TGG 0.287035 1_4:-74389881 None:intergenic
AGAACCTCTTTCTTTATATT+CGG 0.303887 1_4:-74384377 None:intergenic
AAAGGGAGTGCTTTCGCATT+AGG 0.305562 1_4:+74381921 Msa0184760:CDS
CCTACGAATGAGACTATTAA+TGG 0.310848 1_4:-74383808 None:intergenic
TCCACCACTTGTTCATTTGC+TGG 0.314607 1_4:+74383984 Msa0184760:CDS
CAATGTTTGATGGTGGTTAT+AGG 0.316662 1_4:+74388388 Msa0184760:CDS
ATAATGTGTCGGATTTCATT+AGG 0.317549 1_4:+74386518 Msa0184760:CDS
TGTCTCTCAGGATATATTAC+TGG 0.318295 1_4:+74389166 Msa0184760:intron
AAACTTCCCATCTAATATTT+GGG 0.326330 1_4:-74388797 None:intergenic
AAATAAAATCAGATAGAAAA+TGG 0.328733 1_4:-74381375 None:intergenic
CAAGACATTGAAAAGATTAG+AGG 0.333836 1_4:+74386799 Msa0184760:CDS
GCGTCCAGATTTATATATAC+TGG 0.337107 1_4:+74388925 Msa0184760:intron
TAGAGATCCCAAATATTAGA+TGG 0.348876 1_4:+74388790 Msa0184760:CDS
AAGAAAGAGGTTCTATTTGC+TGG 0.352180 1_4:+74384386 Msa0184760:CDS
TGTGGAAGGAGGTGCGATTC+CGG 0.359310 1_4:+74381821 Msa0184760:CDS
TTCACAAACAATTAAACTGC+TGG 0.367993 1_4:+74390232 Msa0184760:three_prime_UTR
GAAATGTCTGCCTTTGCATT+GGG 0.370822 1_4:+74385224 Msa0184760:CDS
TCTCGTCGAAGTTGCTAATC+AGG 0.372235 1_4:+74381605 Msa0184760:CDS
TACCTAAGTAATCCAATAAC+TGG 0.378852 1_4:-74384419 None:intergenic
TTCTGAACGCAATCAGTAAC+AGG 0.383768 1_4:-74381870 None:intergenic
AGATAGAAAATGGCGAGAAT+TGG 0.385650 1_4:-74381365 None:intergenic
AGAAGGTCTTGAGCAATATC+TGG 0.388231 1_4:-74388964 None:intergenic
CCTCAATGATAATGCATTGA+AGG 0.391244 1_4:-74389222 None:intergenic
AAGAATAAGAGGGGTGCAGT+TGG 0.392577 1_4:+74390494 Msa0184760:three_prime_UTR
GACGAGATCTGACGGTCTTC+CGG 0.398909 1_4:-74381549 None:intergenic
AAATGATGAAAATAAAATTC+AGG 0.399085 1_4:+74384068 Msa0184760:CDS
GAAGGAGGAGCGGCGTCTAC+AGG 0.402577 1_4:-74387318 None:intergenic
GTGACACCAGCAGCATGCCT+TGG 0.403277 1_4:-74390338 None:intergenic
AGTCGACCTGTATACCATAA+AGG 0.404275 1_4:-74389982 None:intergenic
CTTTCTTTCTTTCTTTGATG+TGG 0.410738 1_4:+74390051 Msa0184760:three_prime_UTR
ATTCTTCTTTGATCATCTGC+AGG 0.411866 1_4:-74387063 None:intergenic
CCGCTTCCCTCTGACTTTCA+GGG 0.417129 1_4:-74384632 None:intergenic
ACAAAGTAATTGCGGATCTC+TGG 0.420288 1_4:-74389834 None:intergenic
ACAATTAGTTGTTGATGTTC+CGG 0.420661 1_4:-74383717 None:intergenic
TACATTCTGTACATCGCAAT+TGG 0.421151 1_4:-74389923 None:intergenic
TAATGTGTCGGATTTCATTA+GGG 0.421529 1_4:+74386519 Msa0184760:CDS
AGCACCATCAAGTTGCTGTT+TGG 0.423972 1_4:-74387253 None:intergenic
AGGGAAGCGGCATTGTTACT+TGG 0.426859 1_4:+74384645 Msa0184760:CDS
TGTACATCGCAATTGGTTAG+AGG 0.428663 1_4:-74389916 None:intergenic
AGCTCCAAACAGCAACTTGA+TGG 0.434657 1_4:+74387249 Msa0184760:CDS
TCATAGATATAGTAAATATA+CGG 0.436226 1_4:+74390108 Msa0184760:three_prime_UTR
CAGTAGAGAGGAAGAATAAG+AGG 0.436926 1_4:+74390483 Msa0184760:three_prime_UTR
TTCTCAACTTCATGCTCAAA+CGG 0.439189 1_4:-74381900 None:intergenic
TTCTTGTGTTGTACCAGGAA+GGG 0.439973 1_4:+74389954 Msa0184760:three_prime_UTR
GCATTTCGTGCAATGTTTGA+TGG 0.440899 1_4:+74388378 Msa0184760:CDS
TAAGTTAGACGAAGAATTAC+CGG 0.441802 1_4:+74381530 Msa0184760:CDS
AATGTTTGATGGTGGTTATA+GGG 0.449011 1_4:+74388389 Msa0184760:CDS
AAGATCAACAAGGTGTGTTA+AGG 0.453328 1_4:-74383751 None:intergenic
TGACACCAGCAGCATGCCTT+GGG 0.456887 1_4:-74390337 None:intergenic
ATTTGAATGGATCACAGAAC+TGG 0.458725 1_4:-74381333 None:intergenic
TTGGAAATGAAAGATTTGAA+TGG 0.459307 1_4:-74381346 None:intergenic
AGAAATGTCTGCCTTTGCAT+TGG 0.459751 1_4:+74385223 Msa0184760:CDS
ATCAAGTTGCTGTTTGGAGC+TGG 0.459757 1_4:-74387247 None:intergenic
TGCTCATAGAATTTGTCTAC+TGG 0.460117 1_4:+74388344 Msa0184760:CDS
TGCATTGGGGAGATTGGCCC+AGG 0.465694 1_4:+74385238 Msa0184760:CDS
ATTTCTCTAAGTTGTACATC+AGG 0.465886 1_4:-74385206 None:intergenic
AATAAGAGGGGTGCAGTTGG+AGG 0.466339 1_4:+74390497 Msa0184760:three_prime_UTR
TTTCTTGTGTTGTACCAGGA+AGG 0.469611 1_4:+74389953 Msa0184760:three_prime_UTR
TCTTGTGTTGTACCAGGAAG+GGG 0.473703 1_4:+74389955 Msa0184760:three_prime_UTR
TCCATGAACGAGAGAGAAGA+AGG 0.480698 1_4:-74381456 None:intergenic
AAATGAAATGCGTAGAGAAA+AGG 0.480714 1_4:+74390438 Msa0184760:three_prime_UTR
TCTTATTCTTCCTCTCTACT+GGG 0.481698 1_4:-74390481 None:intergenic
GGGTCTCCTTTATGGTATAC+AGG 0.483215 1_4:+74389976 Msa0184760:three_prime_UTR
TTTCTTATGCAATATTGTGA+TGG 0.483721 1_4:+74390147 Msa0184760:three_prime_UTR
AACAATTATCATATGAGGAA+TGG 0.488923 1_4:-74390172 None:intergenic
GAGCGGCGTCTACAGGAGAC+AGG 0.489511 1_4:-74387311 None:intergenic
CATGAGAGGCAAACCTGACA+TGG 0.490179 1_4:-74383881 None:intergenic
GATAAGTTGAGCGCGAGGCC+AGG 0.490906 1_4:+74389278 Msa0184760:CDS
CTCGCCGATCTCGCGAAGAA+TGG 0.492122 1_4:+74381699 Msa0184760:CDS
TACGGCCCAAGGCATGCTGC+TGG 0.492787 1_4:+74390332 Msa0184760:three_prime_UTR
TCACTGCCTCTCCGAGAGGA+AGG 0.495947 1_4:+74381497 Msa0184760:CDS
ACTGCCTCTCCGAGAGGAAG+GGG 0.496118 1_4:+74381499 Msa0184760:CDS
TCTCGGAGAGGCAGTGACCT+TGG 0.498509 1_4:-74381491 None:intergenic
TTTGAGCATGAAGTTGAGAA+AGG 0.499940 1_4:+74381903 Msa0184760:CDS
GTATTACAGGTTGGTGTGAT+CGG 0.500755 1_4:+74384335 Msa0184760:intron
ATCTTATGCGAGTTTCAGAA+AGG 0.503114 1_4:+74386998 Msa0184760:CDS
GCAACATTAAAACCCATGTC+AGG 0.505215 1_4:+74383868 Msa0184760:CDS
ACGTTAACAATTATCATATG+AGG 0.508263 1_4:-74390177 None:intergenic
TTCTTCTTACAGGTTTACTT+AGG 0.509350 1_4:+74388129 Msa0184760:intron
TCTTATGCGAGTTTCAGAAA+GGG 0.510889 1_4:+74386999 Msa0184760:CDS
TTTACCATTCTTCGCGAGAT+CGG 0.511331 1_4:-74381703 None:intergenic
AGATATGTTCCGTAGACCTA+TGG 0.512252 1_4:-74390413 None:intergenic
TTTCTGTGTAGGATGGAAGG+TGG 0.512896 1_4:+74383958 Msa0184760:intron
TTATGGCCTTGCAGAGAATG+AGG 0.514595 1_4:+74385690 Msa0184760:CDS
TAATGATGCTAGAGACAGAA+AGG 0.515534 1_4:-74390082 None:intergenic
TGTCAGACGACAGGAATTAA+CGG 0.516782 1_4:-74390270 None:intergenic
TGTGGTGTTGGTTGGCGCTA+TGG 0.517130 1_4:-74381422 None:intergenic
CCATTAATAGTCTCATTCGT+AGG 0.517559 1_4:+74383808 Msa0184760:CDS
AGATTACAGTCTATGGGAGT+TGG 0.519743 1_4:-74389874 None:intergenic
GCACGTTCGTCGGCGGTAGG+CGG 0.520168 1_4:-74381576 None:intergenic
CCCTGAAAGTCAGAGGGAAG+CGG 0.523107 1_4:+74384632 Msa0184760:CDS
TGGCGCTATGGTTAACAGAA+TGG 0.523930 1_4:-74381410 None:intergenic
TGTAAACAATGCTACATTGT+CGG 0.525597 1_4:+74388161 Msa0184760:CDS
ATTGATCAGCTGCTCGAAGA+AGG 0.530249 1_4:-74388981 None:intergenic
TTAATTCCTGTCGTCTGACA+TGG 0.531784 1_4:+74390273 Msa0184760:three_prime_UTR
GGAAGTTGTGAATGTGATTG+TGG 0.532465 1_4:+74381803 Msa0184760:CDS
CACTGCCTCTCCGAGAGGAA+GGG 0.532570 1_4:+74381498 Msa0184760:CDS
TTGAGCATGAAGTTGAGAAA+GGG 0.538121 1_4:+74381904 Msa0184760:CDS
ATCTCCGAATATAAAGAAAG+AGG 0.539197 1_4:+74384373 Msa0184760:CDS
ATAAGTTGAGCGCGAGGCCA+GGG 0.542921 1_4:+74389279 Msa0184760:CDS
ATTAGGACTTCTCGCCGTCA+AGG 0.543293 1_4:+74381938 Msa0184760:CDS
TTCTTCTTTGATCATCTGCA+GGG 0.544161 1_4:-74387062 None:intergenic
CCTTCAATGCATTATCATTG+AGG 0.544504 1_4:+74389222 Msa0184760:CDS
TGAAGATGCTTAATCAAAGC+CGG 0.546672 1_4:-74381840 None:intergenic
GAGAAGTGCCGCACGTTCGT+CGG 0.547594 1_4:-74381586 None:intergenic
TCGGATTTCATTAGGGTAGG+TGG 0.548232 1_4:+74386526 Msa0184760:CDS
GGTGAAGAAGAGTGTGGTGT+TGG 0.550186 1_4:-74381434 None:intergenic
GTTATTTCTTGTGTTGTACC+AGG 0.550400 1_4:+74389949 Msa0184760:three_prime_UTR
AACCAGTTATTGGATTACTT+AGG 0.550875 1_4:+74384417 Msa0184760:CDS
TCACAAACAATTAAACTGCT+GGG 0.551171 1_4:+74390233 Msa0184760:three_prime_UTR
TCCTCCTTCTCCAACACCAC+AGG 0.551268 1_4:+74387332 Msa0184760:CDS
TTCCCCTCAGGATAATGTGT+CGG 0.552630 1_4:+74386507 Msa0184760:intron
ACCTGTGGTGTTGGAGAAGG+AGG 0.552899 1_4:-74387333 None:intergenic
ACTGCTGGGTAATTTAGGCC+AGG 0.553069 1_4:+74390247 Msa0184760:three_prime_UTR
TACTATACTCGTACGGCCCA+AGG 0.554502 1_4:+74390321 Msa0184760:three_prime_UTR
CACTGCAGATTACAGTCTAT+GGG 0.555635 1_4:-74389880 None:intergenic
TCCAGCAAATGAACAAGTGG+TGG 0.556965 1_4:-74383985 None:intergenic
CGCAGCATTAGAATCAGAGT+CGG 0.557692 1_4:-74384183 None:intergenic
CATTGTGTGCAATACCAGCT+TGG 0.557922 1_4:-74385594 None:intergenic
AAGGTGCAAAGAGCAGCTGC+TGG 0.559222 1_4:+74384021 Msa0184760:CDS
GAGCTTTAACAAAGTAATTG+CGG 0.561626 1_4:-74389842 None:intergenic
AATGATGCTAGAGACAGAAA+GGG 0.564027 1_4:-74390081 None:intergenic
GCTGGAATTTGCTGATACAA+AGG 0.566935 1_4:+74384002 Msa0184760:CDS
AGATTAGAGGAGAAGATTCA+CGG 0.568629 1_4:+74386812 Msa0184760:CDS
GAGTCAAGAAGCTTGAGAAG+TGG 0.569377 1_4:-74385628 None:intergenic
AAGAAGAGTGTGGTGTTGGT+TGG 0.575072 1_4:-74381430 None:intergenic
CTTGAACCTACCTGTGGTGT+TGG 0.575698 1_4:-74387342 None:intergenic
AGAGAACATGCACTACTCTC+CGG 0.577511 1_4:-74390022 None:intergenic
CTTATGCGAGTTTCAGAAAG+GGG 0.578222 1_4:+74387000 Msa0184760:CDS
AAGAAGGGTGAAGAAGAGTG+TGG 0.578694 1_4:-74381440 None:intergenic
TGAATGGATCACAGAACTGG+AGG 0.580296 1_4:-74381330 None:intergenic
ATCATACCTCATTCTCTGCA+AGG 0.581209 1_4:-74385696 None:intergenic
ATGAGTAGCACGCTTAGCCG+CGG 0.581562 1_4:-74381673 None:intergenic
GCCGCACGTTCGTCGGCGGT+AGG 0.583158 1_4:-74381579 None:intergenic
CACGCTGCCCTGAAAGTCAG+AGG 0.583183 1_4:+74384625 Msa0184760:CDS
CTTGTGTTGTACCAGGAAGG+GGG 0.585650 1_4:+74389956 Msa0184760:three_prime_UTR
AGTAGAGAGGAAGAATAAGA+GGG 0.586698 1_4:+74390484 Msa0184760:three_prime_UTR
AGAGATCCCAAATATTAGAT+GGG 0.587179 1_4:+74388791 Msa0184760:CDS
CAAGTTGGCCAATAAAGCCT+CGG 0.587308 1_4:+74387287 Msa0184760:CDS
CTCGCATAAGATATAACAGA+TGG 0.587389 1_4:-74386987 None:intergenic
TGCTGCTATTCATTATGAAG+CGG 0.591200 1_4:+74384215 Msa0184760:CDS
ACAGTTCCATGTCAGACGAC+AGG 0.591963 1_4:-74390279 None:intergenic
GACGAAAGCATCTCTATCAA+AGG 0.592011 1_4:-74385182 None:intergenic
GGAACATCAACAACTAATTG+TGG 0.592529 1_4:+74383719 Msa0184760:CDS
ACTTCATGCTCAAACGGCAA+CGG 0.593141 1_4:-74381894 None:intergenic
AGCTACTGATTCAGACTGCA+AGG 0.598009 1_4:+74384677 Msa0184760:CDS
GTCTACAGGAGACAGGGCCG+AGG 0.599726 1_4:-74387304 None:intergenic
AAAGGTGTACCATAGGTCTA+CGG 0.599871 1_4:+74390404 Msa0184760:three_prime_UTR
AAGTGCCGCACGTTCGTCGG+CGG 0.602387 1_4:-74381583 None:intergenic
GTGTCGGATTTCATTAGGGT+AGG 0.603157 1_4:+74386523 Msa0184760:CDS
GACGACAGGAATTAACGGCC+TGG 0.604652 1_4:-74390265 None:intergenic
GGCCAATCTCCCCAATGCAA+AGG 0.606240 1_4:-74385234 None:intergenic
CCTACCTGTGGTGTTGGAGA+AGG 0.607565 1_4:-74387336 None:intergenic
CAGGACACACATAACCAAGC+TGG 0.608709 1_4:+74385580 Msa0184760:intron
ATGGAGTTTCAGAGACGCCA+AGG 0.609263 1_4:+74381474 Msa0184760:CDS
GCCTACCGCCGACGAACGTG+CGG 0.610300 1_4:+74381578 Msa0184760:CDS
CATGACAGGAGAAGGATGCA+AGG 0.611719 1_4:+74388763 Msa0184760:intron
TACGAGTATAGTATTTGCTA+CGG 0.614969 1_4:-74390311 None:intergenic
CATTAATAGTCTCATTCGTA+GGG 0.616601 1_4:+74383809 Msa0184760:CDS
ACTTTCTGCACCCAGTAGAG+AGG 0.617802 1_4:+74390471 Msa0184760:three_prime_UTR
CTGTGAGTACACAATTGCAC+AGG 0.621930 1_4:+74389029 Msa0184760:CDS
AAATGTCTGCCTTTGCATTG+GGG 0.623106 1_4:+74385225 Msa0184760:CDS
TGAAATGCGTAGAGAAAAGG+AGG 0.623760 1_4:+74390441 Msa0184760:three_prime_UTR
AATTCCAGCAAATGAACAAG+TGG 0.624346 1_4:-74383988 None:intergenic
GCTGGTATTGCACACAATGG+TGG 0.625726 1_4:+74385598 Msa0184760:CDS
TGCTGCGGCTTTATGCAAGT+TGG 0.629100 1_4:+74387272 Msa0184760:CDS
ACGCTGCCCTGAAAGTCAGA+GGG 0.634516 1_4:+74384626 Msa0184760:CDS
TTTCGTGCAATGTTTGATGG+TGG 0.641730 1_4:+74388381 Msa0184760:CDS
GGAGTTCAAAGACTACAAGA+AGG 0.642933 1_4:+74386547 Msa0184760:CDS
GTTGTGAATGTGATTGTGGA+AGG 0.644050 1_4:+74381807 Msa0184760:CDS
CCATGAACGAGAGAGAAGAA+GGG 0.644551 1_4:-74381455 None:intergenic
GCGGTGCCGACGAGATCTGA+CGG 0.644725 1_4:-74381557 None:intergenic
CTATGGTTAACAGAATGGAA+TGG 0.644888 1_4:-74381405 None:intergenic
CTAAAAGAAATACGTTACAC+CGG 0.648961 1_4:+74390003 Msa0184760:three_prime_UTR
AAAGCATCTCTATCAAAGGT+CGG 0.649168 1_4:-74385178 None:intergenic
ATGACAGGAGAAGGATGCAA+GGG 0.650751 1_4:+74388764 Msa0184760:intron
TGGTGTTGGAGAAGGAGGAG+CGG 0.652625 1_4:-74387328 None:intergenic
TAGCAAATACTATACTCGTA+CGG 0.654128 1_4:+74390314 Msa0184760:three_prime_UTR
TTTGCCCCTTCCTCTCGGAG+AGG 0.654825 1_4:-74381503 None:intergenic
GAATGAAGACGATCGAGCCG+CGG 0.657533 1_4:+74381656 Msa0184760:CDS
TTCTCGAGTCTACTTTCACG+TGG 0.661326 1_4:+74381634 Msa0184760:CDS
GTGAATGTGATTGTGGAAGG+AGG 0.669059 1_4:+74381810 Msa0184760:CDS
ATGAGAGGCAAACCTGACAT+GGG 0.671038 1_4:-74383880 None:intergenic
TAGGTTCACATTGTACAGAG+AGG 0.672210 1_4:+74385149 Msa0184760:intron
ACAGCAACTTGATGGTGCTG+CGG 0.686608 1_4:+74387257 Msa0184760:CDS
AAGGTCACTGCCTCTCCGAG+AGG 0.690613 1_4:+74381493 Msa0184760:CDS
AGCGGCGTCTACAGGAGACA+GGG 0.692565 1_4:-74387310 None:intergenic
ACTTTGATAAGTTGAGCGCG+AGG 0.693850 1_4:+74389273 Msa0184760:CDS
GCCTCTTTAAAAGATCAACA+AGG 0.700661 1_4:-74383761 None:intergenic
CAAGCTGGTATTGCACACAA+TGG 0.700835 1_4:+74385595 Msa0184760:CDS
ATGATGCTAGAGACAGAAAG+GGG 0.701274 1_4:-74390080 None:intergenic
GGAAGACCGTCAGATCTCGT+CGG 0.712275 1_4:+74381551 Msa0184760:CDS
GTAGAGAGGAAGAATAAGAG+GGG 0.716782 1_4:+74390485 Msa0184760:three_prime_UTR
CAACAACTAATTGTGGACAG+TGG 0.718009 1_4:+74383726 Msa0184760:CDS
TGAACGCAATCAGTAACAGG+CGG 0.719381 1_4:-74381867 None:intergenic
CGTGAAAGTAGACTCGAGAA+CGG 0.732007 1_4:-74381631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTGATTTTATAAAATTAATT+TGG + chr1_4:74382583-74382602 Msa0184760:intron 10.0%
!! ATAGGTTTAAATAATAAATT+GGG + chr1_4:74383392-74383411 Msa0184760:intron 10.0%
!! AATACTTTGTATTATATATA+TGG + chr1_4:74383615-74383634 Msa0184760:intron 10.0%
!!! CAATTATATCTTTTTTTAAA+GGG - chr1_4:74383662-74383681 None:intergenic 10.0%
!!! ACAATTATATCTTTTTTTAA+AGG - chr1_4:74383663-74383682 None:intergenic 10.0%
!!! TTTTTTTTCTTAACATTATA+TGG + chr1_4:74383933-74383952 Msa0184760:intron 10.0%
!!! AAACTATAATGATAAATTTT+AGG + chr1_4:74384249-74384268 Msa0184760:intron 10.0%
!!! TATTTAAGTTTTTCTAATAT+TGG + chr1_4:74387742-74387761 Msa0184760:intron 10.0%
!! AAATAAAATCAGATAGAAAA+TGG - chr1_4:74381378-74381397 None:intergenic 15.0%
!!! TTTTATTTTTCCTATTAAAC+AGG + chr1_4:74382321-74382340 Msa0184760:intron 15.0%
!! AAAATAAGTAATTTCAGTAT+GGG - chr1_4:74382700-74382719 None:intergenic 15.0%
!! AAAAATAAGTAATTTCAGTA+TGG - chr1_4:74382701-74382720 None:intergenic 15.0%
!! CATAGGTTTAAATAATAAAT+TGG + chr1_4:74383391-74383410 Msa0184760:intron 15.0%
!! AAATGATGAAAATAAAATTC+AGG + chr1_4:74384068-74384087 Msa0184760:CDS 15.0%
!! ATATAAACAAATTCAAGATA+CGG - chr1_4:74384508-74384527 None:intergenic 15.0%
!!! TTGTTTTATTCAACAAAAAA+AGG - chr1_4:74384934-74384953 None:intergenic 15.0%
!! TATACAATGTTTACATTTAT+AGG + chr1_4:74385495-74385514 Msa0184760:intron 15.0%
!!! ATATTTTTTTTTCCAATTTC+AGG + chr1_4:74385561-74385580 Msa0184760:intron 15.0%
!! CTGTTCAAATTTAATAAAAA+AGG + chr1_4:74387399-74387418 Msa0184760:intron 15.0%
!! TCAAATTTAATAAAAAAGGA+AGG + chr1_4:74387403-74387422 Msa0184760:intron 15.0%
!! CAAATTTAATAAAAAAGGAA+GGG + chr1_4:74387404-74387423 Msa0184760:intron 15.0%
!! AAATTTAATAAAAAAGGAAG+GGG + chr1_4:74387405-74387424 Msa0184760:intron 15.0%
!! AAAAGGATTGATATAAAAAA+AGG - chr1_4:74387526-74387545 None:intergenic 15.0%
!! TATCTTATTGTTTATTTGAT+CGG + chr1_4:74388903-74388922 Msa0184760:intron 15.0%
!!! TTTTTTTTTCTAGTTCTTTT+TGG + chr1_4:74389463-74389482 Msa0184760:intron 15.0%
!!! TTTTTTTTCTAGTTCTTTTT+GGG + chr1_4:74389464-74389483 Msa0184760:intron 15.0%
!! AAATCATATGATATTTAGAA+TGG + chr1_4:74389731-74389750 Msa0184760:intron 15.0%
!! TCATAGATATAGTAAATATA+CGG + chr1_4:74390108-74390127 Msa0184760:three_prime_UTR 15.0%
!! TTATCAAATTTGTATGATTC+TGG + chr1_4:74381983-74382002 Msa0184760:intron 20.0%
!!! CATTTTTTAAAGATTGTGTA+TGG - chr1_4:74382239-74382258 None:intergenic 20.0%
!! ATAGGAAAAATAAAACAGAA+CGG - chr1_4:74382316-74382335 None:intergenic 20.0%
!! AAATAAGTAATTTCAGTATG+GGG - chr1_4:74382699-74382718 None:intergenic 20.0%
!! TATTTCATTATGACTGTATA+TGG - chr1_4:74382885-74382904 None:intergenic 20.0%
!!! TTCTCTGAAAAAAAACATAT+CGG + chr1_4:74383133-74383152 Msa0184760:intron 20.0%
!! TATAAACAAATTCAAGATAC+GGG - chr1_4:74384507-74384526 None:intergenic 20.0%
!! TGTCAAGAAACAAAAAAATT+GGG - chr1_4:74384532-74384551 None:intergenic 20.0%
!! TTGTCAAGAAACAAAAAAAT+TGG - chr1_4:74384533-74384552 None:intergenic 20.0%
!!! TCTAGAATAGTTGATTATAT+AGG + chr1_4:74385049-74385068 Msa0184760:intron 20.0%
!! GAAAAAAAAAACAATAACCT+GGG - chr1_4:74385258-74385277 None:intergenic 20.0%
!! AGAAAAAAAAAACAATAACC+TGG - chr1_4:74385259-74385278 None:intergenic 20.0%
!! GCAAATCTAAAAATCTATTA+CGG - chr1_4:74385366-74385385 None:intergenic 20.0%
!! GGAAAAAAAAATATCAATCA+TGG - chr1_4:74385555-74385574 None:intergenic 20.0%
!! TGTCTTGTGATATATTATTA+TGG - chr1_4:74385822-74385841 None:intergenic 20.0%
!! CCATTATTTAAATTTAAGAG+TGG - chr1_4:74386442-74386461 None:intergenic 20.0%
!! CCACTCTTAAATTTAAATAA+TGG + chr1_4:74386439-74386458 Msa0184760:intron 20.0%
!! GGGAAAAATAAAACAAAAAA+GGG - chr1_4:74386492-74386511 None:intergenic 20.0%
!! GAAATATAACAAGTACAAAA+AGG - chr1_4:74387170-74387189 None:intergenic 20.0%
!!! TTTCCTTTTGATTTTAACAT+AGG + chr1_4:74387488-74387507 Msa0184760:intron 20.0%
!! TTTCCTATGTTAAAATCAAA+AGG - chr1_4:74387494-74387513 None:intergenic 20.0%
!!! ATATCAATCCTTTTTAGAAA+AGG + chr1_4:74387532-74387551 Msa0184760:intron 20.0%
!!! AATAATGTCTGGTTTTTTTT+TGG - chr1_4:74387971-74387990 None:intergenic 20.0%
!! TTATAAACTATTCTTCTTAC+AGG + chr1_4:74388119-74388138 Msa0184760:intron 20.0%
!! TTTATACTGAACTAATAACT+TGG + chr1_4:74389341-74389360 Msa0184760:intron 20.0%
! TTGGAAATGAAAGATTTGAA+TGG - chr1_4:74381349-74381368 None:intergenic 25.0%
! GAAAAATCAAATTACCTTGA+CGG - chr1_4:74381955-74381974 None:intergenic 25.0%
! TAGAAATGAGAAAAAGAAGT+TGG + chr1_4:74382134-74382153 Msa0184760:intron 25.0%
!!! GAATTTTGAGTTTGTCATAT+TGG + chr1_4:74382370-74382389 Msa0184760:intron 25.0%
! ACATTCAAAACAGATAAAAC+TGG - chr1_4:74382481-74382500 None:intergenic 25.0%
!!! ATCTGTTTTGAATGTATTGT+TGG + chr1_4:74382486-74382505 Msa0184760:intron 25.0%
! TTACAACAAACAAACTTTCA+GGG - chr1_4:74382655-74382674 None:intergenic 25.0%
! TTTACAACAAACAAACTTTC+AGG - chr1_4:74382656-74382675 None:intergenic 25.0%
!!! AGTTTGTTTGTTGTAAACTT+TGG + chr1_4:74382659-74382678 Msa0184760:intron 25.0%
! AAAATAGGTACTATCAGAAA+AGG - chr1_4:74382766-74382785 None:intergenic 25.0%
! GATGTGATTTCAGTTAAAAT+AGG - chr1_4:74382781-74382800 None:intergenic 25.0%
!! TCTCTGAAAAAAAACATATC+GGG + chr1_4:74383134-74383153 Msa0184760:intron 25.0%
! AAAAAAAACATATCGGGTTT+GGG + chr1_4:74383140-74383159 Msa0184760:intron 25.0%
! TGTTAGAAAAAAAGAAGTGA+TGG + chr1_4:74383169-74383188 Msa0184760:intron 25.0%
! GTTAGAAAAAAAGAAGTGAT+GGG + chr1_4:74383170-74383189 Msa0184760:intron 25.0%
! TTAGAAAAAAAGAAGTGATG+GGG + chr1_4:74383171-74383190 Msa0184760:intron 25.0%
! AATACTAAGAGAAAAATCCA+TGG + chr1_4:74383273-74383292 Msa0184760:intron 25.0%
!! GAAAAAATCGAATGAGTTTT+TGG + chr1_4:74383310-74383329 Msa0184760:intron 25.0%
! AGAATTTACTATCTCGTAAT+TGG - chr1_4:74383340-74383359 None:intergenic 25.0%
! GGTTTAAATAATAAATTGGG+TGG + chr1_4:74383395-74383414 Msa0184760:intron 25.0%
! GCTAAAATCAATCATGTAAT+TGG - chr1_4:74383501-74383520 None:intergenic 25.0%
!!! CTTTTAAAGAGGCATAATAA+TGG + chr1_4:74383771-74383790 Msa0184760:CDS 25.0%
! TTGTATATTTAGACTCAGTT+TGG + chr1_4:74383909-74383928 Msa0184760:intron 25.0%
!! ATTATATGGATTTTCTGTGT+AGG + chr1_4:74383947-74383966 Msa0184760:intron 25.0%
! GATGAAAATAAAATTCAGGT+AGG + chr1_4:74384072-74384091 Msa0184760:intron 25.0%
! AATGAATTGGATTGTATTAC+AGG + chr1_4:74384322-74384341 Msa0184760:intron 25.0%
! AGAACCTCTTTCTTTATATT+CGG - chr1_4:74384380-74384399 None:intergenic 25.0%
! ATAAACAAATTCAAGATACG+GGG - chr1_4:74384506-74384525 None:intergenic 25.0%
!!! GATAGTGGAAAATTTTAGTT+AGG + chr1_4:74384726-74384745 Msa0184760:intron 25.0%
!!! TATTTTTGTACTTGTACTTG+AGG + chr1_4:74384809-74384828 Msa0184760:intron 25.0%
!! ATTTTTGTACTTGTACTTGA+GGG + chr1_4:74384810-74384829 Msa0184760:intron 25.0%
! TAAAACAACTGAACATTAGT+TGG + chr1_4:74384946-74384965 Msa0184760:intron 25.0%
! AAAACAACTGAACATTAGTT+GGG + chr1_4:74384947-74384966 Msa0184760:intron 25.0%
! TAATACATAACAACCAAACA+TGG - chr1_4:74384997-74385016 None:intergenic 25.0%
! ACACAATTGAGTTATAAACA+AGG - chr1_4:74385284-74385303 None:intergenic 25.0%
! TATAACTCAATTGTGTAAGT+TGG + chr1_4:74385288-74385307 Msa0184760:intron 25.0%
! ATAACTCAATTGTGTAAGTT+GGG + chr1_4:74385289-74385308 Msa0184760:intron 25.0%
! ATCTAAAAATCTATTACGGA+AGG - chr1_4:74385362-74385381 None:intergenic 25.0%
! AAAATATCAATCATGGCAAA+GGG - chr1_4:74385548-74385567 None:intergenic 25.0%
! AAAAATATCAATCATGGCAA+AGG - chr1_4:74385549-74385568 None:intergenic 25.0%
!! CCAAAACATTTAAGATTTAG+AGG - chr1_4:74385866-74385885 None:intergenic 25.0%
!! CCTCTAAATCTTAAATGTTT+TGG + chr1_4:74385863-74385882 Msa0184760:intron 25.0%
!!! GTTTTGGAATTTTGCTTTTT+TGG + chr1_4:74385879-74385898 Msa0184760:intron 25.0%
!!! TATAGGCTTTAAGAGTAAAT+AGG + chr1_4:74385987-74386006 Msa0184760:intron 25.0%
!!! ATAGGCTTTAAGAGTAAATA+GGG + chr1_4:74385988-74386007 Msa0184760:intron 25.0%
! AAATACTAGACATAAGGATA+GGG - chr1_4:74386205-74386224 None:intergenic 25.0%
!! TAAATCATTTTATCCAAGCA+GGG - chr1_4:74386414-74386433 None:intergenic 25.0%
! GGGGAAAAATAAAACAAAAA+AGG - chr1_4:74386493-74386512 None:intergenic 25.0%
! ATGTGAATAGTTATAGCATT+AGG + chr1_4:74386687-74386706 Msa0184760:intron 25.0%
! TGTGAATAGTTATAGCATTA+GGG + chr1_4:74386688-74386707 Msa0184760:intron 25.0%
! TATATCAACTATCAGTTCTA+TGG + chr1_4:74386912-74386931 Msa0184760:intron 25.0%
! ATATCAACTATCAGTTCTAT+GGG + chr1_4:74386913-74386932 Msa0184760:intron 25.0%
! ACCTATAAGAAGAAAATTGA+CGG - chr1_4:74386961-74386980 None:intergenic 25.0%
!! AGAATTTTTATTGAACACCA+TGG + chr1_4:74387081-74387100 Msa0184760:CDS 25.0%
! ATCTTCGTAAAATACTTTCA+TGG + chr1_4:74387111-74387130 Msa0184760:intron 25.0%
! TCTTCGTAAAATACTTTCAT+GGG + chr1_4:74387112-74387131 Msa0184760:intron 25.0%
! TATACAAAATGTGTGTTGAA+AGG - chr1_4:74387689-74387708 None:intergenic 25.0%
! AAGTACATAAAACAAATGGT+AGG - chr1_4:74387719-74387738 None:intergenic 25.0%
!!! ACCATTTGTTTTATGTACTT+TGG + chr1_4:74387719-74387738 Msa0184760:intron 25.0%
! ACCAAAGTACATAAAACAAA+TGG - chr1_4:74387723-74387742 None:intergenic 25.0%
! GATGTCTAGCTAAAAATATA+TGG + chr1_4:74387894-74387913 Msa0184760:intron 25.0%
!!! ATCAGATGCTCATTTTTAAA+TGG - chr1_4:74387921-74387940 None:intergenic 25.0%
! ATTTAAAAATGAGCATCTGA+TGG + chr1_4:74387920-74387939 Msa0184760:intron 25.0%
!! AAGACATTGATAATAATGTC+TGG - chr1_4:74387982-74388001 None:intergenic 25.0%
! AACAAAGAAAAGAGATTAAC+CGG - chr1_4:74388307-74388326 None:intergenic 25.0%
!!! GGAAAAATATAATTTGGTGT+GGG - chr1_4:74388432-74388451 None:intergenic 25.0%
!! CAATAATGGTTTTCTTCTTT+TGG - chr1_4:74388533-74388552 None:intergenic 25.0%
! AAAACACGTTAAGTCAATAA+TGG - chr1_4:74388547-74388566 None:intergenic 25.0%
! AAACTTCCCATCTAATATTT+GGG - chr1_4:74388800-74388819 None:intergenic 25.0%
! AAAACTTCCCATCTAATATT+TGG - chr1_4:74388801-74388820 None:intergenic 25.0%
! TGATCCAGTATATATAAATC+TGG - chr1_4:74388932-74388951 None:intergenic 25.0%
! ATATATCCGTGTTTGTAAAA+TGG + chr1_4:74389121-74389140 Msa0184760:intron 25.0%
! TATATCCGTGTTTGTAAAAT+GGG + chr1_4:74389122-74389141 Msa0184760:intron 25.0%
! CATTAGAATATAAACTACCA+AGG - chr1_4:74389420-74389439 None:intergenic 25.0%
! TAGAAAAAAAAATCAGTGCA+CGG - chr1_4:74389455-74389474 None:intergenic 25.0%
! TTTAGACAAAGTTCATTCAA+AGG + chr1_4:74389589-74389608 Msa0184760:intron 25.0%
! TTAGACAAAGTTCATTCAAA+GGG + chr1_4:74389590-74389609 Msa0184760:intron 25.0%
! ACTGCACAGTTTATTTATAA+TGG + chr1_4:74389698-74389717 Msa0184760:intron 25.0%
! TAAGAAAAAACAATTCGTGA+AGG - chr1_4:74390134-74390153 None:intergenic 25.0%
! TTTCTTATGCAATATTGTGA+TGG + chr1_4:74390147-74390166 Msa0184760:three_prime_UTR 25.0%
! AACAATTATCATATGAGGAA+TGG - chr1_4:74390175-74390194 None:intergenic 25.0%
! ACGTTAACAATTATCATATG+AGG - chr1_4:74390180-74390199 None:intergenic 25.0%
TAAGTTAGACGAAGAATTAC+CGG + chr1_4:74381530-74381549 Msa0184760:CDS 30.0%
TACAGTATGTCCTGTTTAAT+AGG - chr1_4:74382334-74382353 None:intergenic 30.0%
ACTGTATTGAATGATCTATG+TGG + chr1_4:74382348-74382367 Msa0184760:intron 30.0%
TCTTGAATACAACATAACTG+TGG - chr1_4:74382411-74382430 None:intergenic 30.0%
ACAGTTATGTTGTATTCAAG+AGG + chr1_4:74382410-74382429 Msa0184760:intron 30.0%
CAGTTATGTTGTATTCAAGA+GGG + chr1_4:74382411-74382430 Msa0184760:intron 30.0%
TACAACAAACAAACTTTCAG+GGG - chr1_4:74382654-74382673 None:intergenic 30.0%
TACAGTCATAATGAAATACG+AGG + chr1_4:74382887-74382906 Msa0184760:intron 30.0%
! GTTATTCGTGATAATGCATA+TGG + chr1_4:74382945-74382964 Msa0184760:intron 30.0%
! CTTATGGAATTGATTCACAA+AGG - chr1_4:74382975-74382994 None:intergenic 30.0%
! ATTTTTCTCTATGCTGTACA+AGG + chr1_4:74383093-74383112 Msa0184760:intron 30.0%
GAAAAAAAACATATCGGGTT+TGG + chr1_4:74383139-74383158 Msa0184760:intron 30.0%
TTAAAGTGAATGTCTCTCAT+AGG + chr1_4:74383374-74383393 Msa0184760:intron 30.0%
AAATAATAAATTGGGTGGTC+TGG + chr1_4:74383400-74383419 Msa0184760:intron 30.0%
!!! TACATGATTGATTTTAGCTC+TGG + chr1_4:74383503-74383522 Msa0184760:intron 30.0%
AGTATTGTGAAAAAGTGACA+AGG - chr1_4:74383601-74383620 None:intergenic 30.0%
ACAATTAGTTGTTGATGTTC+CGG - chr1_4:74383720-74383739 None:intergenic 30.0%
!! ACCTTGTTGATCTTTTAAAG+AGG + chr1_4:74383760-74383779 Msa0184760:CDS 30.0%
CATTAATAGTCTCATTCGTA+GGG + chr1_4:74383809-74383828 Msa0184760:CDS 30.0%
AATTGGATTGTATTACAGGT+TGG + chr1_4:74384326-74384345 Msa0184760:intron 30.0%
ATCTCCGAATATAAAGAAAG+AGG + chr1_4:74384373-74384392 Msa0184760:CDS 30.0%
AACCAGTTATTGGATTACTT+AGG + chr1_4:74384417-74384436 Msa0184760:CDS 30.0%
TACCTAAGTAATCCAATAAC+TGG - chr1_4:74384422-74384441 None:intergenic 30.0%
! TTTTTGTACTTGTACTTGAG+GGG + chr1_4:74384811-74384830 Msa0184760:intron 30.0%
AAACAACTGAACATTAGTTG+GGG + chr1_4:74384948-74384967 Msa0184760:intron 30.0%
TTGCTAAAATAACAACTCCA+TGG + chr1_4:74385025-74385044 Msa0184760:intron 30.0%
!! AATCAACTATTCTAGAACCA+TGG - chr1_4:74385045-74385064 None:intergenic 30.0%
ATTTCTCTAAGTTGTACATC+AGG - chr1_4:74385209-74385228 None:intergenic 30.0%
! GTGATTCTCTTTTAGATTCA+TGG + chr1_4:74385315-74385334 Msa0184760:intron 30.0%
TACATCAATTAACGAGAAGA+TGG - chr1_4:74385407-74385426 None:intergenic 30.0%
TCGTTAATTGATGTATCTAG+TGG + chr1_4:74385412-74385431 Msa0184760:intron 30.0%
CGTTAATTGATGTATCTAGT+GGG + chr1_4:74385413-74385432 Msa0184760:intron 30.0%
CTAAGATGAGTTATGTTCTT+AGG - chr1_4:74385445-74385464 None:intergenic 30.0%
AAATATCAATCATGGCAAAG+GGG - chr1_4:74385547-74385566 None:intergenic 30.0%
AAGCTTCTTGACTCAAAAAA+TGG + chr1_4:74385637-74385656 Msa0184760:CDS 30.0%
AGCTTCTTGACTCAAAAAAT+GGG + chr1_4:74385638-74385657 Msa0184760:CDS 30.0%
AGATTTAGAGGTCAATCATT+TGG - chr1_4:74385854-74385873 None:intergenic 30.0%
ATAAACACAAAAAAGCCGTT+CGG - chr1_4:74385933-74385952 None:intergenic 30.0%
! TTTTGTGTTTATAAGCCCTT+CGG + chr1_4:74385941-74385960 Msa0184760:intron 30.0%
AAAGCCTATAAAACAACGTT+CGG - chr1_4:74385977-74385996 None:intergenic 30.0%
!! TAGGCTTTAAGAGTAAATAG+GGG + chr1_4:74385989-74386008 Msa0184760:intron 30.0%
GTTCTTCAGATTCAATAGAA+AGG - chr1_4:74386108-74386127 None:intergenic 30.0%
AATAACATTTGAGAGAGAGT+TGG - chr1_4:74386179-74386198 None:intergenic 30.0%
GAAATACTAGACATAAGGAT+AGG - chr1_4:74386206-74386225 None:intergenic 30.0%
ACTGACAATGTTGTATGATA+CGG - chr1_4:74386303-74386322 None:intergenic 30.0%
! GTAAATCATTTTATCCAAGC+AGG - chr1_4:74386415-74386434 None:intergenic 30.0%
!!! TTTGTTTTATTTTTCCCCTC+AGG + chr1_4:74386495-74386514 Msa0184760:intron 30.0%
ATAATGTGTCGGATTTCATT+AGG + chr1_4:74386518-74386537 Msa0184760:CDS 30.0%
TAATGTGTCGGATTTCATTA+GGG + chr1_4:74386519-74386538 Msa0184760:CDS 30.0%
CTGAAATAAGTGCTAAAACT+AGG - chr1_4:74386607-74386626 None:intergenic 30.0%
!!! CTAGTTTTAGCACTTATTTC+AGG + chr1_4:74386605-74386624 Msa0184760:intron 30.0%
!!! ATTCTAGTTCCCTTTTATAC+AGG - chr1_4:74386654-74386673 None:intergenic 30.0%
TTATAGCATTAGGGATTGAA+CGG + chr1_4:74386697-74386716 Msa0184760:intron 30.0%
GGGGAAAAATAGATTCTTAT+TGG + chr1_4:74386718-74386737 Msa0184760:intron 30.0%
TATATTGACCTATGTGGATA+TGG + chr1_4:74386744-74386763 Msa0184760:intron 30.0%
AATAGAAACCATATCCACAT+AGG - chr1_4:74386755-74386774 None:intergenic 30.0%
! CTCTAATCTTTTCAATGTCT+TGG - chr1_4:74386801-74386820 None:intergenic 30.0%
CAAGACATTGAAAAGATTAG+AGG + chr1_4:74386799-74386818 Msa0184760:CDS 30.0%
! TCCGTCAATTTTCTTCTTAT+AGG + chr1_4:74386957-74386976 Msa0184760:intron 30.0%
ATTTGAACAGAAAGATTGTG+AGG - chr1_4:74387389-74387408 None:intergenic 30.0%
TTTATGATGTGAATAGGCAT+CGG + chr1_4:74387430-74387449 Msa0184760:intron 30.0%
!! TAAAGACGCCTTTTCTAAAA+AGG - chr1_4:74387543-74387562 None:intergenic 30.0%
!! AAAAGGGTTGATATAACCAA+AGG - chr1_4:74387653-74387672 None:intergenic 30.0%
TTTGGTAGAATAATAACGTC+TGG - chr1_4:74387953-74387972 None:intergenic 30.0%
GTCTAAGTAATTATGAAGTG+AGG + chr1_4:74388069-74388088 Msa0184760:intron 30.0%
TTCTTCTTACAGGTTTACTT+AGG + chr1_4:74388129-74388148 Msa0184760:intron 30.0%
TGTAAACAATGCTACATTGT+CGG + chr1_4:74388161-74388180 Msa0184760:CDS 30.0%
! ATTGTCGGATGTTACATTTT+TGG + chr1_4:74388176-74388195 Msa0184760:CDS 30.0%
!!! GATGTTACATTTTTGGTTGA+AGG + chr1_4:74388183-74388202 Msa0184760:CDS 30.0%
!!! TTTTTGGTTGAAGGTGATTA+TGG + chr1_4:74388192-74388211 Msa0184760:intron 30.0%
!!! GTTTTAAGAACGAAACAATG+TGG - chr1_4:74388222-74388241 None:intergenic 30.0%
AGCTACCTTCTCTTAAAATA+TGG + chr1_4:74388250-74388269 Msa0184760:intron 30.0%
!! CAGTACCATATTTTAAGAGA+AGG - chr1_4:74388258-74388277 None:intergenic 30.0%
! TAATCTCTTTTCTTTGTTGC+AGG + chr1_4:74388309-74388328 Msa0184760:intron 30.0%
!! AATGTTTGATGGTGGTTATA+GGG + chr1_4:74388389-74388408 Msa0184760:CDS 30.0%
! GGGAAAAATATAATTTGGTG+TGG - chr1_4:74388433-74388452 None:intergenic 30.0%
GGGAAGGGAAAAATATAATT+TGG - chr1_4:74388438-74388457 None:intergenic 30.0%
! TTGCAGTATGCTTATTTCTT+GGG - chr1_4:74388473-74388492 None:intergenic 30.0%
! TTTTATTGCATTTGCATGAC+AGG + chr1_4:74388749-74388768 Msa0184760:intron 30.0%
TAGAGATCCCAAATATTAGA+TGG + chr1_4:74388790-74388809 Msa0184760:CDS 30.0%
AGAGATCCCAAATATTAGAT+GGG + chr1_4:74388791-74388810 Msa0184760:CDS 30.0%
!!! AAGTTTTTGAGTTGATGATG+AGG + chr1_4:74388814-74388833 Msa0184760:CDS 30.0%
! GCTGATCAATATCTTTTAGA+TGG + chr1_4:74388994-74389013 Msa0184760:CDS 30.0%
! TGCATGCATTCTTTTTATCT+TGG + chr1_4:74389247-74389266 Msa0184760:CDS 30.0%
!!! CTTCATGTTTGTTGTAGTTT+TGG + chr1_4:74389387-74389406 Msa0184760:intron 30.0%
AGAATATAAACTACCAAGGT+CGG - chr1_4:74389416-74389435 None:intergenic 30.0%
ATGTGTGCTCAATATATAGT+TGG + chr1_4:74389506-74389525 Msa0184760:intron 30.0%
! GAGCTTTAACAAAGTAATTG+CGG - chr1_4:74389845-74389864 None:intergenic 30.0%
CTAAAAGAAATACGTTACAC+CGG + chr1_4:74390003-74390022 Msa0184760:three_prime_UTR 30.0%
CTTTCTTTCTTTCTTTGATG+TGG + chr1_4:74390051-74390070 Msa0184760:three_prime_UTR 30.0%
TTCACAAACAATTAAACTGC+TGG + chr1_4:74390232-74390251 Msa0184760:three_prime_UTR 30.0%
TCACAAACAATTAAACTGCT+GGG + chr1_4:74390233-74390252 Msa0184760:three_prime_UTR 30.0%
ATTAAACTGCTGGGTAATTT+AGG + chr1_4:74390242-74390261 Msa0184760:three_prime_UTR 30.0%
! TACGAGTATAGTATTTGCTA+CGG - chr1_4:74390314-74390333 None:intergenic 30.0%
TAGCAAATACTATACTCGTA+CGG + chr1_4:74390314-74390333 Msa0184760:three_prime_UTR 30.0%
! TGTATGCGCTTGTTAAAAAA+AGG + chr1_4:74390386-74390405 Msa0184760:three_prime_UTR 30.0%
! GTTAAAAAAAGGTGTACCAT+AGG + chr1_4:74390397-74390416 Msa0184760:three_prime_UTR 30.0%
AAATGAAATGCGTAGAGAAA+AGG + chr1_4:74390438-74390457 Msa0184760:three_prime_UTR 30.0%
ATTTGAATGGATCACAGAAC+TGG - chr1_4:74381336-74381355 None:intergenic 35.0%
AGATAGAAAATGGCGAGAAT+TGG - chr1_4:74381368-74381387 None:intergenic 35.0%
CTATGGTTAACAGAATGGAA+TGG - chr1_4:74381408-74381427 None:intergenic 35.0%
ATGTGTGTGTGTGAATTTAC+TGG + chr1_4:74381764-74381783 Msa0184760:intron 35.0%
TGAAGATGCTTAATCAAAGC+CGG - chr1_4:74381843-74381862 None:intergenic 35.0%
TTCTCAACTTCATGCTCAAA+CGG - chr1_4:74381903-74381922 None:intergenic 35.0%
TTTGAGCATGAAGTTGAGAA+AGG + chr1_4:74381903-74381922 Msa0184760:CDS 35.0%
TTGAGCATGAAGTTGAGAAA+GGG + chr1_4:74381904-74381923 Msa0184760:CDS 35.0%
AAGAAGTTGGCATATTAGAG+TGG + chr1_4:74382147-74382166 Msa0184760:intron 35.0%
AGAAGTTGGCATATTAGAGT+GGG + chr1_4:74382148-74382167 Msa0184760:intron 35.0%
TTATATCAACATCCACTGTC+AGG + chr1_4:74382451-74382470 Msa0184760:intron 35.0%
TGTCATATTTCATTCCAGAG+AGG + chr1_4:74382511-74382530 Msa0184760:intron 35.0%
AGATCACTAATGCATGTACT+TGG + chr1_4:74382536-74382555 Msa0184760:intron 35.0%
GATCACTAATGCATGTACTT+GGG + chr1_4:74382537-74382556 Msa0184760:intron 35.0%
TTTCACTTCTACTCAAACAG+TGG + chr1_4:74382719-74382738 Msa0184760:intron 35.0%
! ATTTTTCTCAATGCCGAACA+AGG + chr1_4:74383046-74383065 Msa0184760:intron 35.0%
!!! ACTCATTCGATTTTTTCGCT+TGG - chr1_4:74383307-74383326 None:intergenic 35.0%
! TTTGAAATGCTTTCTACAGC+CGG + chr1_4:74383698-74383717 Msa0184760:intron 35.0%
GGAACATCAACAACTAATTG+TGG + chr1_4:74383719-74383738 Msa0184760:CDS 35.0%
AAGATCAACAAGGTGTGTTA+AGG - chr1_4:74383754-74383773 None:intergenic 35.0%
! GCCTCTTTAAAAGATCAACA+AGG - chr1_4:74383764-74383783 None:intergenic 35.0%
CCTACGAATGAGACTATTAA+TGG - chr1_4:74383811-74383830 None:intergenic 35.0%
CCATTAATAGTCTCATTCGT+AGG + chr1_4:74383808-74383827 Msa0184760:CDS 35.0%
AATATACAATCGTGCATGAG+AGG - chr1_4:74383898-74383917 None:intergenic 35.0%
! TATGGATTTTCTGTGTAGGA+TGG + chr1_4:74383951-74383970 Msa0184760:intron 35.0%
AATTCCAGCAAATGAACAAG+TGG - chr1_4:74383991-74384010 None:intergenic 35.0%
AATAAAATTCAGGTAGGCAG+TGG + chr1_4:74384078-74384097 Msa0184760:intron 35.0%
TGCTGCTATTCATTATGAAG+CGG + chr1_4:74384215-74384234 Msa0184760:CDS 35.0%
CTATTCATTATGAAGCGGTA+TGG + chr1_4:74384220-74384239 Msa0184760:intron 35.0%
ATTATGAAGCGGTATGGATA+AGG + chr1_4:74384226-74384245 Msa0184760:intron 35.0%
GTCTATATACATCTCTCATC+TGG + chr1_4:74384292-74384311 Msa0184760:intron 35.0%
ATCTGGCATATGCAATGAAT+TGG + chr1_4:74384309-74384328 Msa0184760:intron 35.0%
AAGAAAGAGGTTCTATTTGC+TGG + chr1_4:74384386-74384405 Msa0184760:CDS 35.0%
CTTAGGTATAATATCAGCTC+TGG + chr1_4:74384434-74384453 Msa0184760:intron 35.0%
AAGGGGAAATGCAATAGAAT+GGG - chr1_4:74384477-74384496 None:intergenic 35.0%
GATAAACTTCACAACCAGAA+GGG + chr1_4:74384704-74384723 Msa0184760:intron 35.0%
! AAATTTTCCACTATCCCTTC+TGG - chr1_4:74384721-74384740 None:intergenic 35.0%
CCAAACTTGAAAGTTTGACT+TGG - chr1_4:74384770-74384789 None:intergenic 35.0%
!! CCAAGTCAAACTTTCAAGTT+TGG + chr1_4:74384767-74384786 Msa0184760:intron 35.0%
!! AATCCCTCACTTCACTTTTA+TGG + chr1_4:74384858-74384877 Msa0184760:intron 35.0%
CAACCATAAAAGTGAAGTGA+GGG - chr1_4:74384864-74384883 None:intergenic 35.0%
ACAACCATAAAAGTGAAGTG+AGG - chr1_4:74384865-74384884 None:intergenic 35.0%
TCTTGAGTAGTTAAGAGAGA+TGG + chr1_4:74384886-74384905 Msa0184760:intron 35.0%
AACAACTGAACATTAGTTGG+GGG + chr1_4:74384949-74384968 Msa0184760:intron 35.0%
ACCAACTACAATTCCATGTT+TGG + chr1_4:74384981-74385000 Msa0184760:intron 35.0%
ACCAAACATGGAATTGTAGT+TGG - chr1_4:74384985-74385004 None:intergenic 35.0%
AATGTGAACCTAAACAAACC+AGG - chr1_4:74385141-74385160 None:intergenic 35.0%
! AAAGCATCTCTATCAAAGGT+CGG - chr1_4:74385181-74385200 None:intergenic 35.0%
ATCAATTAACGAGAAGATGG+AGG - chr1_4:74385404-74385423 None:intergenic 35.0%
AACTGAAAATCCGAATGAAG+TGG + chr1_4:74385721-74385740 Msa0184760:intron 35.0%
TAAACACAAAAAAGCCGTTC+GGG - chr1_4:74385932-74385951 None:intergenic 35.0%
TTTGTGTTTATAAGCCCTTC+GGG + chr1_4:74385942-74385961 Msa0184760:intron 35.0%
AAGCCTATAAAACAACGTTC+GGG - chr1_4:74385976-74385995 None:intergenic 35.0%
!! AGGCTTTAAGAGTAAATAGG+GGG + chr1_4:74385990-74386009 Msa0184760:intron 35.0%
! GTTTTGCCCATAGTTTTTCT+TGG + chr1_4:74386034-74386053 Msa0184760:intron 35.0%
GGAAAGCCAAGAAAAACTAT+GGG - chr1_4:74386043-74386062 None:intergenic 35.0%
AGGAAAGCCAAGAAAAACTA+TGG - chr1_4:74386044-74386063 None:intergenic 35.0%
AGAAAGGAGAGTAGATATGA+TGG - chr1_4:74386092-74386111 None:intergenic 35.0%
ATAGGTGGTTTAGAAATGTG+TGG - chr1_4:74386135-74386154 None:intergenic 35.0%
! ACCACCTATTTTCTACAAAC+AGG + chr1_4:74386146-74386165 Msa0184760:intron 35.0%
ACCTGTTTGTAGAAAATAGG+TGG - chr1_4:74386150-74386169 None:intergenic 35.0%
AGCACCTGTTTGTAGAAAAT+AGG - chr1_4:74386153-74386172 None:intergenic 35.0%
GAGTGGAAATACTAGACATA+AGG - chr1_4:74386211-74386230 None:intergenic 35.0%
GGAATAAACTCAACGTATCA+AGG - chr1_4:74386254-74386273 None:intergenic 35.0%
TAGGCTGTAAAATGCCAATA+CGG - chr1_4:74386276-74386295 None:intergenic 35.0%
TGTTGTATGATACGGTTGAT+AGG - chr1_4:74386295-74386314 None:intergenic 35.0%
TCCTTGGATTCCTGTATAAA+AGG + chr1_4:74386641-74386660 Msa0184760:intron 35.0%
CCTTGGATTCCTGTATAAAA+GGG + chr1_4:74386642-74386661 Msa0184760:intron 35.0%
TATAGCATTAGGGATTGAAC+GGG + chr1_4:74386698-74386717 Msa0184760:intron 35.0%
TGGACATATATTGACCTATG+TGG + chr1_4:74386738-74386757 Msa0184760:intron 35.0%
AGATTAGAGGAGAAGATTCA+CGG + chr1_4:74386812-74386831 Msa0184760:CDS 35.0%
CTCGCATAAGATATAACAGA+TGG - chr1_4:74386990-74387009 None:intergenic 35.0%
ATCTTATGCGAGTTTCAGAA+AGG + chr1_4:74386998-74387017 Msa0184760:CDS 35.0%
TCTTATGCGAGTTTCAGAAA+GGG + chr1_4:74386999-74387018 Msa0184760:CDS 35.0%
! TTTCAGAAAGGGGTTTTCAA+AGG + chr1_4:74387010-74387029 Msa0184760:CDS 35.0%
TTCTTCTTTGATCATCTGCA+GGG - chr1_4:74387065-74387084 None:intergenic 35.0%
ATTCTTCTTTGATCATCTGC+AGG - chr1_4:74387066-74387085 None:intergenic 35.0%
TTACGAAGATGCATTTACCA+TGG - chr1_4:74387101-74387120 None:intergenic 35.0%
AGGATTGAGGAAAATACAAC+TGG - chr1_4:74387369-74387388 None:intergenic 35.0%
!!! TTTCCTTTTGATTTCAGCAG+AGG + chr1_4:74387615-74387634 Msa0184760:intron 35.0%
TTTCCTCTGCTGAAATCAAA+AGG - chr1_4:74387621-74387640 None:intergenic 35.0%
!! GAGGAAAATGTTGTTTCCTT+TGG + chr1_4:74387634-74387653 Msa0184760:intron 35.0%
AGGTCATATCAGTGCAAAAA+GGG - chr1_4:74387669-74387688 None:intergenic 35.0%
AAGGTCATATCAGTGCAAAA+AGG - chr1_4:74387670-74387689 None:intergenic 35.0%
! ATGATATTTGTTGACTGCTG+TGG + chr1_4:74387839-74387858 Msa0184760:intron 35.0%
! AAATTCTTATGCAGGTTGGA+AGG - chr1_4:74388018-74388037 None:intergenic 35.0%
TTCCAACCTGCATAAGAATT+TGG + chr1_4:74388017-74388036 Msa0184760:intron 35.0%
TCCAACCTGCATAAGAATTT+GGG + chr1_4:74388018-74388037 Msa0184760:intron 35.0%
AGTTGACATGTACTGTTAAC+CGG + chr1_4:74388285-74388304 Msa0184760:intron 35.0%
TGCTCATAGAATTTGTCTAC+TGG + chr1_4:74388344-74388363 Msa0184760:CDS 35.0%
!! CAATGTTTGATGGTGGTTAT+AGG + chr1_4:74388388-74388407 Msa0184760:CDS 35.0%
! TGCAGTATGCTTATTTCTTG+GGG - chr1_4:74388472-74388491 None:intergenic 35.0%
! CTTGCAGTATGCTTATTTCT+TGG - chr1_4:74388474-74388493 None:intergenic 35.0%
AGTTTGCAGTAAAAGTTGTC+AGG - chr1_4:74388623-74388642 None:intergenic 35.0%
! GACAACTTTTACTGCAAACT+TGG + chr1_4:74388623-74388642 Msa0184760:intron 35.0%
GCGTCCAGATTTATATATAC+TGG + chr1_4:74388925-74388944 Msa0184760:intron 35.0%
AGCTAGGAAAATTGGTTGTA+TGG + chr1_4:74389054-74389073 Msa0184760:intron 35.0%
TGTCTCTCAGGATATATTAC+TGG + chr1_4:74389166-74389185 Msa0184760:intron 35.0%
! CCTCAATGATAATGCATTGA+AGG - chr1_4:74389225-74389244 None:intergenic 35.0%
CCTTCAATGCATTATCATTG+AGG + chr1_4:74389222-74389241 Msa0184760:CDS 35.0%
CCAACATCGAATAGAATTGA+GGG - chr1_4:74389318-74389337 None:intergenic 35.0%
TCCAACATCGAATAGAATTG+AGG - chr1_4:74389319-74389338 None:intergenic 35.0%
!!! TTTCTAGTTCTTTTTGGGTG+AGG + chr1_4:74389469-74389488 Msa0184760:intron 35.0%
CACGATATAATAAGTCGCTA+TGG - chr1_4:74389552-74389571 None:intergenic 35.0%
TACATTCTGTACATCGCAAT+TGG - chr1_4:74389926-74389945 None:intergenic 35.0%
!! GTTATTTCTTGTGTTGTACC+AGG + chr1_4:74389949-74389968 Msa0184760:three_prime_UTR 35.0%
AATGATGCTAGAGACAGAAA+GGG - chr1_4:74390084-74390103 None:intergenic 35.0%
TAATGATGCTAGAGACAGAA+AGG - chr1_4:74390085-74390104 None:intergenic 35.0%
TCTTATTCTTCCTCTCTACT+GGG - chr1_4:74390484-74390503 None:intergenic 35.0%
AGTAGAGAGGAAGAATAAGA+GGG + chr1_4:74390484-74390503 Msa0184760:three_prime_UTR 35.0%
TTTACCATTCTTCGCGAGAT+CGG - chr1_4:74381706-74381725 None:intergenic 40.0%
!! ACTGGTGATTTTGTTTGCAG+AGG + chr1_4:74381782-74381801 Msa0184760:intron 40.0%
GGAAGTTGTGAATGTGATTG+TGG + chr1_4:74381803-74381822 Msa0184760:CDS 40.0%
GTTGTGAATGTGATTGTGGA+AGG + chr1_4:74381807-74381826 Msa0184760:CDS 40.0%
TTCTGAACGCAATCAGTAAC+AGG - chr1_4:74381873-74381892 None:intergenic 40.0%
TGGGAGGAAAAGTAGCATAT+TGG + chr1_4:74382167-74382186 Msa0184760:intron 40.0%
GTTGTATTCAAGAGGGTGAA+TGG + chr1_4:74382418-74382437 Msa0184760:intron 40.0%
CATTAGTGATCTATCCTCTC+TGG - chr1_4:74382528-74382547 None:intergenic 40.0%
CTTCTACTCAAACAGTGGTT+TGG + chr1_4:74382724-74382743 Msa0184760:intron 40.0%
TAAATCACAGTGATGAGCCA+TGG + chr1_4:74382853-74382872 Msa0184760:intron 40.0%
ACTGTATATGGTCACTTCCA+TGG - chr1_4:74382873-74382892 None:intergenic 40.0%
GCTTGATGCAGTATGTCTTA+TGG - chr1_4:74382991-74383010 None:intergenic 40.0%
AAAAACATATCGGGTTTGGG+TGG + chr1_4:74383143-74383162 Msa0184760:intron 40.0%
TTCGCTTGGTTAATTGACCA+TGG - chr1_4:74383293-74383312 None:intergenic 40.0%
GCTGGCAAGTGAATTGATAA+AGG - chr1_4:74383561-74383580 None:intergenic 40.0%
CAACAACTAATTGTGGACAG+TGG + chr1_4:74383726-74383745 Msa0184760:CDS 40.0%
GCAACATTAAAACCCATGTC+AGG + chr1_4:74383868-74383887 Msa0184760:CDS 40.0%
! GATTTTCTGTGTAGGATGGA+AGG + chr1_4:74383955-74383974 Msa0184760:intron 40.0%
!! GCTGGAATTTGCTGATACAA+AGG + chr1_4:74384002-74384021 Msa0184760:CDS 40.0%
GAGCATCACATTCAACAATC+TGG - chr1_4:74384161-74384180 None:intergenic 40.0%
!! GTATTACAGGTTGGTGTGAT+CGG + chr1_4:74384335-74384354 Msa0184760:intron 40.0%
GGTGCTTTACAACCAGTTAT+TGG + chr1_4:74384407-74384426 Msa0184760:CDS 40.0%
! GCTCTGGACTCAATTATTGT+CGG + chr1_4:74384450-74384469 Msa0184760:intron 40.0%
CTCTGGACTCAATTATTGTC+GGG + chr1_4:74384451-74384470 Msa0184760:intron 40.0%
GAAGGGGAAATGCAATAGAA+TGG - chr1_4:74384478-74384497 None:intergenic 40.0%
AAATTCAAGATACGGGGAGA+GGG - chr1_4:74384500-74384519 None:intergenic 40.0%
GGATAAACTTCACAACCAGA+AGG + chr1_4:74384703-74384722 Msa0184760:intron 40.0%
GGTAAAGAGAGAGTTAAGCT+GGG + chr1_4:74384832-74384851 Msa0184760:intron 40.0%
AATGTATGATGCACCATCAC+AGG - chr1_4:74385082-74385101 None:intergenic 40.0%
TATGGTAAGAACTGTGAGCA+AGG - chr1_4:74385111-74385130 None:intergenic 40.0%
TAGGTTCACATTGTACAGAG+AGG + chr1_4:74385149-74385168 Msa0184760:intron 40.0%
!! GACGAAAGCATCTCTATCAA+AGG - chr1_4:74385185-74385204 None:intergenic 40.0%
AGAAATGTCTGCCTTTGCAT+TGG + chr1_4:74385223-74385242 Msa0184760:CDS 40.0%
GAAATGTCTGCCTTTGCATT+GGG + chr1_4:74385224-74385243 Msa0184760:CDS 40.0%
AAATGTCTGCCTTTGCATTG+GGG + chr1_4:74385225-74385244 Msa0184760:CDS 40.0%
GGTTATGTGTGTCCTGAAAT+TGG - chr1_4:74385576-74385595 None:intergenic 40.0%
!! AATGCTGCTTTCGCTCTTTA+TGG + chr1_4:74385673-74385692 Msa0184760:CDS 40.0%
ATCATACCTCATTCTCTGCA+AGG - chr1_4:74385699-74385718 None:intergenic 40.0%
CAGAAGATGTCCACTTCATT+CGG - chr1_4:74385734-74385753 None:intergenic 40.0%
AATTACAAACCGAACCGCTT+TGG - chr1_4:74385909-74385928 None:intergenic 40.0%
! TTCGGTTTGTAATTCCCGAA+CGG + chr1_4:74385915-74385934 Msa0184760:intron 40.0%
!! TCTCCCGAACGTTGTTTTAT+AGG + chr1_4:74385970-74385989 Msa0184760:intron 40.0%
!! GGCTTTAAGAGTAAATAGGG+GGG + chr1_4:74385991-74386010 Msa0184760:intron 40.0%
AGAATGTTGTGTTGGATGAG+TGG - chr1_4:74386228-74386247 None:intergenic 40.0%
CAAGGATGAGAATGTTGTGT+TGG - chr1_4:74386236-74386255 None:intergenic 40.0%
CGTTGAGTTTATTCCCGTAT+TGG + chr1_4:74386259-74386278 Msa0184760:intron 40.0%
AGGCTGTAAAATGCCAATAC+GGG - chr1_4:74386275-74386294 None:intergenic 40.0%
AAGATACAGCTCGTGTGAAA+GGG - chr1_4:74386350-74386369 None:intergenic 40.0%
AAAGATACAGCTCGTGTGAA+AGG - chr1_4:74386351-74386370 None:intergenic 40.0%
AATCCGACACATTATCCTGA+GGG - chr1_4:74386513-74386532 None:intergenic 40.0%
AAATCCGACACATTATCCTG+AGG - chr1_4:74386514-74386533 None:intergenic 40.0%
GGAGTTCAAAGACTACAAGA+AGG + chr1_4:74386547-74386566 Msa0184760:CDS 40.0%
!! AGGCTTTCTGCTTTTATCCT+TGG + chr1_4:74386625-74386644 Msa0184760:intron 40.0%
! CCCTTTTATACAGGAATCCA+AGG - chr1_4:74386645-74386664 None:intergenic 40.0%
ATAGCATTAGGGATTGAACG+GGG + chr1_4:74386699-74386718 Msa0184760:intron 40.0%
GTGGATATGGTTTCTATTGC+AGG + chr1_4:74386757-74386776 Msa0184760:intron 40.0%
CTTATGCGAGTTTCAGAAAG+GGG + chr1_4:74387000-74387019 Msa0184760:CDS 40.0%
! TTTTCAAAGGCGAATTGCGT+TGG + chr1_4:74387023-74387042 Msa0184760:CDS 40.0%
AGTTAAGCATCTGTCCATGT+AGG + chr1_4:74387192-74387211 Msa0184760:intron 40.0%
TAAGCAACTCAAGACCTACA+TGG - chr1_4:74387209-74387228 None:intergenic 40.0%
CAGAAAGATTGTGAGGATTG+AGG - chr1_4:74387382-74387401 None:intergenic 40.0%
GGGGTCTTTATGATGTGAAT+AGG + chr1_4:74387424-74387443 Msa0184760:intron 40.0%
GGCGTCTTTATGATGTCAAT+AGG + chr1_4:74387553-74387572 Msa0184760:intron 40.0%
ATGTCGTGTATAGTAGTGAG+TGG + chr1_4:74387771-74387790 Msa0184760:intron 40.0%
ACCCAAATTCTTATGCAGGT+TGG - chr1_4:74388022-74388041 None:intergenic 40.0%
AGACAAAGCGAGATTGAAGA+GGG - chr1_4:74388053-74388072 None:intergenic 40.0%
TAGACAAAGCGAGATTGAAG+AGG - chr1_4:74388054-74388073 None:intergenic 40.0%
! AGTGAGGTGTTTCTAAAAGC+TGG + chr1_4:74388085-74388104 Msa0184760:intron 40.0%
GCATTTCGTGCAATGTTTGA+TGG + chr1_4:74388378-74388397 Msa0184760:CDS 40.0%
TTTCGTGCAATGTTTGATGG+TGG + chr1_4:74388381-74388400 Msa0184760:CDS 40.0%
! GCAGTATGCTTATTTCTTGG+GGG - chr1_4:74388471-74388490 None:intergenic 40.0%
TTGCAGTAAAAGTTGTCAGG+AGG - chr1_4:74388620-74388639 None:intergenic 40.0%
AACTTGGCTGTTGTGTTGAA+TGG + chr1_4:74388639-74388658 Msa0184760:intron 40.0%
AGAAGGTCTTGAGCAATATC+TGG - chr1_4:74388967-74388986 None:intergenic 40.0%
! AGGCACCCATTTTACAAACA+CGG - chr1_4:74389130-74389149 None:intergenic 40.0%
ATCCTGAGAGACAAGAACAT+CGG - chr1_4:74389159-74389178 None:intergenic 40.0%
CCCTCAATTCTATTCGATGT+TGG + chr1_4:74389315-74389334 Msa0184760:intron 40.0%
! AGACAGAGCACTACTAAACA+AGG - chr1_4:74389369-74389388 None:intergenic 40.0%
!!! TAGTTCTTTTTGGGTGAGGA+GGG + chr1_4:74389473-74389492 Msa0184760:intron 40.0%
TCTTCAGCTTCTTGATTGTG+TGG + chr1_4:74389767-74389786 Msa0184760:intron 40.0%
ACAAAGTAATTGCGGATCTC+TGG - chr1_4:74389837-74389856 None:intergenic 40.0%
AGATTACAGTCTATGGGAGT+TGG - chr1_4:74389877-74389896 None:intergenic 40.0%
CACTGCAGATTACAGTCTAT+GGG - chr1_4:74389883-74389902 None:intergenic 40.0%
TCACTGCAGATTACAGTCTA+TGG - chr1_4:74389884-74389903 None:intergenic 40.0%
TGTACATCGCAATTGGTTAG+AGG - chr1_4:74389919-74389938 None:intergenic 40.0%
TTTCTTGTGTTGTACCAGGA+AGG + chr1_4:74389953-74389972 Msa0184760:three_prime_UTR 40.0%
TTCTTGTGTTGTACCAGGAA+GGG + chr1_4:74389954-74389973 Msa0184760:three_prime_UTR 40.0%
AGTCGACCTGTATACCATAA+AGG - chr1_4:74389985-74390004 None:intergenic 40.0%
ATGATGCTAGAGACAGAAAG+GGG - chr1_4:74390083-74390102 None:intergenic 40.0%
TGTCAGACGACAGGAATTAA+CGG - chr1_4:74390273-74390292 None:intergenic 40.0%
TTAATTCCTGTCGTCTGACA+TGG + chr1_4:74390273-74390292 Msa0184760:three_prime_UTR 40.0%
! AAAGGTGTACCATAGGTCTA+CGG + chr1_4:74390404-74390423 Msa0184760:three_prime_UTR 40.0%
AGATATGTTCCGTAGACCTA+TGG - chr1_4:74390416-74390435 None:intergenic 40.0%
TGAAATGCGTAGAGAAAAGG+AGG + chr1_4:74390441-74390460 Msa0184760:three_prime_UTR 40.0%
CTCTTATTCTTCCTCTCTAC+TGG - chr1_4:74390485-74390504 None:intergenic 40.0%
CAGTAGAGAGGAAGAATAAG+AGG + chr1_4:74390483-74390502 Msa0184760:three_prime_UTR 40.0%
GTAGAGAGGAAGAATAAGAG+GGG + chr1_4:74390485-74390504 Msa0184760:three_prime_UTR 40.0%
TGGCGCTATGGTTAACAGAA+TGG - chr1_4:74381413-74381432 None:intergenic 45.0%
!! AAGAAGAGTGTGGTGTTGGT+TGG - chr1_4:74381433-74381452 None:intergenic 45.0%
AAGAAGGGTGAAGAAGAGTG+TGG - chr1_4:74381443-74381462 None:intergenic 45.0%
CCATGAACGAGAGAGAAGAA+GGG - chr1_4:74381458-74381477 None:intergenic 45.0%
TCCATGAACGAGAGAGAAGA+AGG - chr1_4:74381459-74381478 None:intergenic 45.0%
TCTCGTCGAAGTTGCTAATC+AGG + chr1_4:74381605-74381624 Msa0184760:CDS 45.0%
CGTGAAAGTAGACTCGAGAA+CGG - chr1_4:74381634-74381653 None:intergenic 45.0%
TTCTCGAGTCTACTTTCACG+TGG + chr1_4:74381634-74381653 Msa0184760:CDS 45.0%
CAAGCGCAATTCAACACGAT+CGG - chr1_4:74381738-74381757 None:intergenic 45.0%
GTGAATGTGATTGTGGAAGG+AGG + chr1_4:74381810-74381829 Msa0184760:CDS 45.0%
TGAACGCAATCAGTAACAGG+CGG - chr1_4:74381870-74381889 None:intergenic 45.0%
ACTTCATGCTCAAACGGCAA+CGG - chr1_4:74381897-74381916 None:intergenic 45.0%
!! AAAGGGAGTGCTTTCGCATT+AGG + chr1_4:74381921-74381940 Msa0184760:CDS 45.0%
AGTTGGCATATTAGAGTGGG+AGG + chr1_4:74382151-74382170 Msa0184760:intron 45.0%
AAAACTGGAAGTCCTGACAG+TGG - chr1_4:74382466-74382485 None:intergenic 45.0%
AATGATTCGTAGCAACCAGC+AGG - chr1_4:74383015-74383034 None:intergenic 45.0%
! GAGAGAGTAAGTGCCTTGTT+CGG - chr1_4:74383062-74383081 None:intergenic 45.0%
AAGTGACAAGGTCCTCATCA+TGG - chr1_4:74383589-74383608 None:intergenic 45.0%
ATGAGAGGCAAACCTGACAT+GGG - chr1_4:74383883-74383902 None:intergenic 45.0%
TTTCTGTGTAGGATGGAAGG+TGG + chr1_4:74383958-74383977 Msa0184760:intron 45.0%
TCCACCACTTGTTCATTTGC+TGG + chr1_4:74383984-74384003 Msa0184760:CDS 45.0%
TCCAGCAAATGAACAAGTGG+TGG - chr1_4:74383988-74384007 None:intergenic 45.0%
CGCAGCATTAGAATCAGAGT+CGG - chr1_4:74384186-74384205 None:intergenic 45.0%
CAAATTCAAGATACGGGGAG+AGG - chr1_4:74384501-74384520 None:intergenic 45.0%
!! AGCTACTGATTCAGACTGCA+AGG + chr1_4:74384677-74384696 Msa0184760:CDS 45.0%
CTGATTCAGACTGCAAGGTA+AGG + chr1_4:74384682-74384701 Msa0184760:intron 45.0%
TTCACAACCAGAAGGGATAG+TGG + chr1_4:74384711-74384730 Msa0184760:intron 45.0%
GGGTAAAGAGAGAGTTAAGC+TGG + chr1_4:74384831-74384850 Msa0184760:intron 45.0%
!! TATAGGTGCTACTCCTGTGA+TGG + chr1_4:74385066-74385085 Msa0184760:intron 45.0%
TTCTTACCATACGTTCCACC+TGG + chr1_4:74385120-74385139 Msa0184760:intron 45.0%
AACAAACCAGGTGGAACGTA+TGG - chr1_4:74385129-74385148 None:intergenic 45.0%
!! ACGTTCCACCTGGTTTGTTT+AGG + chr1_4:74385130-74385149 Msa0184760:intron 45.0%
GTGAACCTAAACAAACCAGG+TGG - chr1_4:74385138-74385157 None:intergenic 45.0%
CATTGTGTGCAATACCAGCT+TGG - chr1_4:74385597-74385616 None:intergenic 45.0%
CAAGCTGGTATTGCACACAA+TGG + chr1_4:74385595-74385614 Msa0184760:CDS 45.0%
GAGTCAAGAAGCTTGAGAAG+TGG - chr1_4:74385631-74385650 None:intergenic 45.0%
! TTATGGCCTTGCAGAGAATG+AGG + chr1_4:74385690-74385709 Msa0184760:CDS 45.0%
AAGCAGGGTAGTTGAAATGG+AGG - chr1_4:74386399-74386418 None:intergenic 45.0%
TCCATTTCAACTACCCTGCT+TGG + chr1_4:74386398-74386417 Msa0184760:intron 45.0%
TCCAAGCAGGGTAGTTGAAA+TGG - chr1_4:74386402-74386421 None:intergenic 45.0%
TTCCCCTCAGGATAATGTGT+CGG + chr1_4:74386507-74386526 Msa0184760:intron 45.0%
ATCCGACACATTATCCTGAG+GGG - chr1_4:74386512-74386531 None:intergenic 45.0%
GTGTCGGATTTCATTAGGGT+AGG + chr1_4:74386523-74386542 Msa0184760:CDS 45.0%
TCGGATTTCATTAGGGTAGG+TGG + chr1_4:74386526-74386545 Msa0184760:CDS 45.0%
!! ATCAAGTTGCTGTTTGGAGC+TGG - chr1_4:74387250-74387269 None:intergenic 45.0%
AGCTCCAAACAGCAACTTGA+TGG + chr1_4:74387249-74387268 Msa0184760:CDS 45.0%
! AGCACCATCAAGTTGCTGTT+TGG - chr1_4:74387256-74387275 None:intergenic 45.0%
! CAAGTTGGCCAATAAAGCCT+CGG + chr1_4:74387287-74387306 Msa0184760:CDS 45.0%
AGTAGTGAGTGGTCGATACA+AGG + chr1_4:74387782-74387801 Msa0184760:intron 45.0%
CAGCACCCAAATTCTTATGC+AGG - chr1_4:74388026-74388045 None:intergenic 45.0%
TTCTTGGGGGAGCTTCTTTA+GGG - chr1_4:74388458-74388477 None:intergenic 45.0%
TTTCTTGGGGGAGCTTCTTT+AGG - chr1_4:74388459-74388478 None:intergenic 45.0%
TGCATTTGCATGACAGGAGA+AGG + chr1_4:74388755-74388774 Msa0184760:intron 45.0%
ATGACAGGAGAAGGATGCAA+GGG + chr1_4:74388764-74388783 Msa0184760:intron 45.0%
ATTGATCAGCTGCTCGAAGA+AGG - chr1_4:74388984-74389003 None:intergenic 45.0%
CTGTGAGTACACAATTGCAC+AGG + chr1_4:74389029-74389048 Msa0184760:CDS 45.0%
CACAGGTGAGCTAGGAAAAT+TGG + chr1_4:74389046-74389065 Msa0184760:intron 45.0%
TCCTGAGAGACAAGAACATC+GGG - chr1_4:74389158-74389177 None:intergenic 45.0%
! ACTTTGATAAGTTGAGCGCG+AGG + chr1_4:74389273-74389292 Msa0184760:CDS 45.0%
!!! CTAGTTCTTTTTGGGTGAGG+AGG + chr1_4:74389472-74389491 Msa0184760:intron 45.0%
TGACTGTAGAAACCAACCTC+TGG + chr1_4:74389642-74389661 Msa0184760:intron 45.0%
CAAACCATTCAGCTAACCAG+AGG - chr1_4:74389661-74389680 None:intergenic 45.0%
! CTCTGGTTAGCTGAATGGTT+TGG + chr1_4:74389659-74389678 Msa0184760:intron 45.0%
!! AGAGAGTGCCTGCAAACAAT+CGG - chr1_4:74389795-74389814 None:intergenic 45.0%
TCTTGTGTTGTACCAGGAAG+GGG + chr1_4:74389955-74389974 Msa0184760:three_prime_UTR 45.0%
GGGTCTCCTTTATGGTATAC+AGG + chr1_4:74389976-74389995 Msa0184760:three_prime_UTR 45.0%
AGAGAACATGCACTACTCTC+CGG - chr1_4:74390025-74390044 None:intergenic 45.0%
! AAGAATAAGAGGGGTGCAGT+TGG + chr1_4:74390494-74390513 Msa0184760:three_prime_UTR 45.0%
! GGTGAAGAAGAGTGTGGTGT+TGG - chr1_4:74381437-74381456 None:intergenic 50.0%
CCCTTCTTCTCTCTCGTTCA+TGG + chr1_4:74381455-74381474 Msa0184760:exon 50.0%
ATGGAGTTTCAGAGACGCCA+AGG + chr1_4:74381474-74381493 Msa0184760:CDS 50.0%
! ACGTTTTTGCCCCTTCCTCT+CGG - chr1_4:74381511-74381530 None:intergenic 50.0%
ATTAGGACTTCTCGCCGTCA+AGG + chr1_4:74381938-74381957 Msa0184760:CDS 50.0%
ATACTGCATCAAGCACCTGC+TGG + chr1_4:74382997-74383016 Msa0184760:intron 50.0%
!! GTGAGGGTGTCTCTTGCTAT+GGG + chr1_4:74383435-74383454 Msa0184760:intron 50.0%
TGACAAGGTCCTCATCATGG+AGG - chr1_4:74383586-74383605 None:intergenic 50.0%
CATGAGAGGCAAACCTGACA+TGG - chr1_4:74383884-74383903 None:intergenic 50.0%
AGGGAAGCGGCATTGTTACT+TGG + chr1_4:74384645-74384664 Msa0184760:CDS 50.0%
TGCCTTTGCATTGGGGAGAT+TGG + chr1_4:74385232-74385251 Msa0184760:CDS 50.0%
CAGGACACACATAACCAAGC+TGG + chr1_4:74385580-74385599 Msa0184760:intron 50.0%
GCTGGTATTGCACACAATGG+TGG + chr1_4:74385598-74385617 Msa0184760:CDS 50.0%
CAACCAAGCCGTGTCTCATT+AGG + chr1_4:74385768-74385787 Msa0184760:intron 50.0%
CAAGCCGTGTCTCATTAGGT+GGG + chr1_4:74385772-74385791 Msa0184760:intron 50.0%
CGATCCCACCTAATGAGACA+CGG - chr1_4:74385779-74385798 None:intergenic 50.0%
CGTGTCTCATTAGGTGGGAT+CGG + chr1_4:74385777-74385796 Msa0184760:intron 50.0%
ATTAGGTGGGATCGGCTATG+TGG + chr1_4:74385785-74385804 Msa0184760:intron 50.0%
!!! GCTTTTTTGGCCCTCCAAAG+CGG + chr1_4:74385892-74385911 Msa0184760:intron 50.0%
! ACAAACCGAACCGCTTTGGA+GGG - chr1_4:74385905-74385924 None:intergenic 50.0%
TACAAACCGAACCGCTTTGG+AGG - chr1_4:74385906-74385925 None:intergenic 50.0%
TTCGGGAGATATCTCCCGAA+GGG - chr1_4:74385959-74385978 None:intergenic 50.0%
AGCTCAATCGCTAGAGACAG+AGG - chr1_4:74386064-74386083 None:intergenic 50.0%
!! ACAGCAACTTGATGGTGCTG+CGG + chr1_4:74387257-74387276 Msa0184760:CDS 50.0%
! TGCTGCGGCTTTATGCAAGT+TGG + chr1_4:74387272-74387291 Msa0184760:CDS 50.0%
CTTGAACCTACCTGTGGTGT+TGG - chr1_4:74387345-74387364 None:intergenic 50.0%
ACTGGACTTGAACCTACCTG+TGG - chr1_4:74387351-74387370 None:intergenic 50.0%
! CTTATGCAGGTTGGAAGGCA+TGG - chr1_4:74388013-74388032 None:intergenic 50.0%
CATGACAGGAGAAGGATGCA+AGG + chr1_4:74388763-74388782 Msa0184760:intron 50.0%
CACAATTGCACAGGTGAGCT+AGG + chr1_4:74389038-74389057 Msa0184760:intron 50.0%
GACAAGAACATCGGGTCATG+AGG - chr1_4:74389150-74389169 None:intergenic 50.0%
ACCCGATGTTCTTGTCTCTC+AGG + chr1_4:74389154-74389173 Msa0184760:intron 50.0%
AGGGAATCAGATCGATACCC+TGG - chr1_4:74389299-74389318 None:intergenic 50.0%
!!! GTAGTTTTGGTGACCGACCT+TGG + chr1_4:74389400-74389419 Msa0184760:intron 50.0%
CCATTCAGCTAACCAGAGGT+TGG - chr1_4:74389657-74389676 None:intergenic 50.0%
! CCAACCTCTGGTTAGCTGAA+TGG + chr1_4:74389654-74389673 Msa0184760:intron 50.0%
CTTGTGTTGTACCAGGAAGG+GGG + chr1_4:74389956-74389975 Msa0184760:three_prime_UTR 50.0%
ACTGCTGGGTAATTTAGGCC+AGG + chr1_4:74390247-74390266 Msa0184760:three_prime_UTR 50.0%
ACAGTTCCATGTCAGACGAC+AGG - chr1_4:74390282-74390301 None:intergenic 50.0%
TACTATACTCGTACGGCCCA+AGG + chr1_4:74390321-74390340 Msa0184760:three_prime_UTR 50.0%
ACTTTCTGCACCCAGTAGAG+AGG + chr1_4:74390471-74390490 Msa0184760:three_prime_UTR 50.0%
!! TGTGGTGTTGGTTGGCGCTA+TGG - chr1_4:74381425-74381444 None:intergenic 55.0%
GACGAGATCTGACGGTCTTC+CGG - chr1_4:74381552-74381571 None:intergenic 55.0%
GGAAGACCGTCAGATCTCGT+CGG + chr1_4:74381551-74381570 Msa0184760:CDS 55.0%
GAATGAAGACGATCGAGCCG+CGG + chr1_4:74381656-74381675 Msa0184760:CDS 55.0%
ATGAGTAGCACGCTTAGCCG+CGG - chr1_4:74381676-74381695 None:intergenic 55.0%
! TGTGGAAGGAGGTGCGATTC+CGG + chr1_4:74381821-74381840 Msa0184760:CDS 55.0%
! GGTGGTCTGGTCTGAGACTA+CGG + chr1_4:74383413-74383432 Msa0184760:intron 55.0%
! TCTGGTCTGAGACTACGGTG+AGG + chr1_4:74383418-74383437 Msa0184760:intron 55.0%
! CTGGTCTGAGACTACGGTGA+GGG + chr1_4:74383419-74383438 Msa0184760:intron 55.0%
!! GGTGAGGGTGTCTCTTGCTA+TGG + chr1_4:74383434-74383453 Msa0184760:intron 55.0%
TGCCAGCATCCTCCATGATG+AGG + chr1_4:74383574-74383593 Msa0184760:intron 55.0%
GTCCTCATCATGGAGGATGC+TGG - chr1_4:74383579-74383598 None:intergenic 55.0%
AAGGTGCAAAGAGCAGCTGC+TGG + chr1_4:74384021-74384040 Msa0184760:CDS 55.0%
AAGATACGGGGAGAGGGAAG+GGG - chr1_4:74384494-74384513 None:intergenic 55.0%
CAAGATACGGGGAGAGGGAA+GGG - chr1_4:74384495-74384514 None:intergenic 55.0%
TCAAGATACGGGGAGAGGGA+AGG - chr1_4:74384496-74384515 None:intergenic 55.0%
ACGCTGCCCTGAAAGTCAGA+GGG + chr1_4:74384626-74384645 Msa0184760:CDS 55.0%
CCGCTTCCCTCTGACTTTCA+GGG - chr1_4:74384635-74384654 None:intergenic 55.0%
CCCTGAAAGTCAGAGGGAAG+CGG + chr1_4:74384632-74384651 Msa0184760:CDS 55.0%
GGCCAATCTCCCCAATGCAA+AGG - chr1_4:74385237-74385256 None:intergenic 55.0%
CCACCTAATGAGACACGGCT+TGG - chr1_4:74385774-74385793 None:intergenic 55.0%
CCAAGCCGTGTCTCATTAGG+TGG + chr1_4:74385771-74385790 Msa0184760:intron 55.0%
TTTGGCCCTCCAAAGCGGTT+CGG + chr1_4:74385897-74385916 Msa0184760:intron 55.0%
GTTCGGGAGATATCTCCCGA+AGG - chr1_4:74385960-74385979 None:intergenic 55.0%
! AGACAGGGCCGAGGCTTTAT+TGG - chr1_4:74387298-74387317 None:intergenic 55.0%
! TGGTGTTGGAGAAGGAGGAG+CGG - chr1_4:74387331-74387350 None:intergenic 55.0%
TCCTCCTTCTCCAACACCAC+AGG + chr1_4:74387332-74387351 Msa0184760:CDS 55.0%
! ACCTGTGGTGTTGGAGAAGG+AGG - chr1_4:74387336-74387355 None:intergenic 55.0%
! CCTACCTGTGGTGTTGGAGA+AGG - chr1_4:74387339-74387358 None:intergenic 55.0%
CCTTCTCCAACACCACAGGT+AGG + chr1_4:74387336-74387355 Msa0184760:intron 55.0%
! GGGGGAGCTTCTTTAGGGAA+GGG - chr1_4:74388453-74388472 None:intergenic 55.0%
! TGGGGGAGCTTCTTTAGGGA+AGG - chr1_4:74388454-74388473 None:intergenic 55.0%
! ATAAGTTGAGCGCGAGGCCA+GGG + chr1_4:74389279-74389298 Msa0184760:CDS 55.0%
!! GTGTGGCACCGATTGTTTGC+AGG + chr1_4:74389784-74389803 Msa0184760:intron 55.0%
CATAAAGGAGACCCCCTTCC+TGG - chr1_4:74389970-74389989 None:intergenic 55.0%
CAGGAAGGGGGTCTCCTTTA+TGG + chr1_4:74389968-74389987 Msa0184760:three_prime_UTR 55.0%
GACGACAGGAATTAACGGCC+TGG - chr1_4:74390268-74390287 None:intergenic 55.0%
TGACACCAGCAGCATGCCTT+GGG - chr1_4:74390340-74390359 None:intergenic 55.0%
TCTCGGAGAGGCAGTGACCT+TGG - chr1_4:74381494-74381513 None:intergenic 60.0%
AAGGTCACTGCCTCTCCGAG+AGG + chr1_4:74381493-74381512 Msa0184760:CDS 60.0%
TCACTGCCTCTCCGAGAGGA+AGG + chr1_4:74381497-74381516 Msa0184760:CDS 60.0%
CACTGCCTCTCCGAGAGGAA+GGG + chr1_4:74381498-74381517 Msa0184760:CDS 60.0%
ACTGCCTCTCCGAGAGGAAG+GGG + chr1_4:74381499-74381518 Msa0184760:CDS 60.0%
TTTGCCCCTTCCTCTCGGAG+AGG - chr1_4:74381506-74381525 None:intergenic 60.0%
!! GAGAAGTGCCGCACGTTCGT+CGG - chr1_4:74381589-74381608 None:intergenic 60.0%
CTCGCCGATCTCGCGAAGAA+TGG + chr1_4:74381699-74381718 Msa0184760:CDS 60.0%
CACGCTGCCCTGAAAGTCAG+AGG + chr1_4:74384625-74384644 Msa0184760:CDS 60.0%
GCCGCTTCCCTCTGACTTTC+AGG - chr1_4:74384636-74384655 None:intergenic 60.0%
! TGCATTGGGGAGATTGGCCC+AGG + chr1_4:74385238-74385257 Msa0184760:CDS 60.0%
AGCGGCGTCTACAGGAGACA+GGG - chr1_4:74387313-74387332 None:intergenic 60.0%
! GATAAGTTGAGCGCGAGGCC+AGG + chr1_4:74389278-74389297 Msa0184760:CDS 60.0%
GTGACACCAGCAGCATGCCT+TGG - chr1_4:74390341-74390360 None:intergenic 60.0%
!! GCGGTGCCGACGAGATCTGA+CGG - chr1_4:74381560-74381579 None:intergenic 65.0%
! AAGTGCCGCACGTTCGTCGG+CGG - chr1_4:74381586-74381605 None:intergenic 65.0%
GTCTACAGGAGACAGGGCCG+AGG - chr1_4:74387307-74387326 None:intergenic 65.0%
GAGCGGCGTCTACAGGAGAC+AGG - chr1_4:74387314-74387333 None:intergenic 65.0%
GAAGGAGGAGCGGCGTCTAC+AGG - chr1_4:74387321-74387340 None:intergenic 65.0%
TACGGCCCAAGGCATGCTGC+TGG + chr1_4:74390332-74390351 Msa0184760:three_prime_UTR 65.0%
GCACGTTCGTCGGCGGTAGG+CGG - chr1_4:74381579-74381598 None:intergenic 70.0%
GCCTACCGCCGACGAACGTG+CGG + chr1_4:74381578-74381597 Msa0184760:CDS 70.0%
GCCGCACGTTCGTCGGCGGT+AGG - chr1_4:74381582-74381601 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 74381333 74390519 74381333 ID=Msa0184760;Name=Msa0184760
chr1_4 mRNA 74381333 74390519 74381333 ID=Msa0184760-mRNA-1;Parent=Msa0184760;Name=Msa0184760-mRNA-1;_AED=0.10;_eAED=0.10;_QI=141|1|1|1|1|1|19|626|704
chr1_4 exon 74381333 74381720 74381333 ID=Msa0184760-mRNA-1:exon:25352;Parent=Msa0184760-mRNA-1
chr1_4 exon 74381802 74381959 74381802 ID=Msa0184760-mRNA-1:exon:25353;Parent=Msa0184760-mRNA-1
chr1_4 exon 74383717 74383889 74383717 ID=Msa0184760-mRNA-1:exon:25354;Parent=Msa0184760-mRNA-1
chr1_4 exon 74383969 74384089 74383969 ID=Msa0184760-mRNA-1:exon:25355;Parent=Msa0184760-mRNA-1
chr1_4 exon 74384162 74384236 74384162 ID=Msa0184760-mRNA-1:exon:25356;Parent=Msa0184760-mRNA-1
chr1_4 exon 74384344 74384438 74384344 ID=Msa0184760-mRNA-1:exon:25357;Parent=Msa0184760-mRNA-1
chr1_4 exon 74384623 74384698 74384623 ID=Msa0184760-mRNA-1:exon:25358;Parent=Msa0184760-mRNA-1
chr1_4 exon 74385152 74385259 74385152 ID=Msa0184760-mRNA-1:exon:25359;Parent=Msa0184760-mRNA-1
chr1_4 exon 74385583 74385711 74385583 ID=Msa0184760-mRNA-1:exon:25360;Parent=Msa0184760-mRNA-1
chr1_4 exon 74386517 74386585 74386517 ID=Msa0184760-mRNA-1:exon:25361;Parent=Msa0184760-mRNA-1
chr1_4 exon 74386779 74386838 74386779 ID=Msa0184760-mRNA-1:exon:25362;Parent=Msa0184760-mRNA-1
chr1_4 exon 74386979 74387102 74386979 ID=Msa0184760-mRNA-1:exon:25363;Parent=Msa0184760-mRNA-1
chr1_4 exon 74387214 74387353 74387214 ID=Msa0184760-mRNA-1:exon:25364;Parent=Msa0184760-mRNA-1
chr1_4 exon 74388141 74388204 74388141 ID=Msa0184760-mRNA-1:exon:25365;Parent=Msa0184760-mRNA-1
chr1_4 exon 74388331 74388410 74388331 ID=Msa0184760-mRNA-1:exon:25366;Parent=Msa0184760-mRNA-1
chr1_4 exon 74388771 74388835 74388771 ID=Msa0184760-mRNA-1:exon:25367;Parent=Msa0184760-mRNA-1
chr1_4 exon 74388933 74389050 74388933 ID=Msa0184760-mRNA-1:exon:25368;Parent=Msa0184760-mRNA-1
chr1_4 exon 74389176 74389300 74389176 ID=Msa0184760-mRNA-1:exon:25369;Parent=Msa0184760-mRNA-1
chr1_4 exon 74389806 74390519 74389806 ID=Msa0184760-mRNA-1:exon:25370;Parent=Msa0184760-mRNA-1
chr1_4 five_prime_UTR 74381333 74381473 74381333 ID=Msa0184760-mRNA-1:five_prime_utr;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74381474 74381720 74381474 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74381802 74381959 74381802 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74383717 74383889 74383717 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74383969 74384089 74383969 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74384162 74384236 74384162 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74384344 74384438 74384344 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74384623 74384698 74384623 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74385152 74385259 74385152 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74385583 74385711 74385583 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74386517 74386585 74386517 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74386779 74386838 74386779 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74386979 74387102 74386979 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74387214 74387353 74387214 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74388141 74388204 74388141 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74388331 74388410 74388331 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74388771 74388835 74388771 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74388933 74389050 74388933 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74389176 74389300 74389176 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 CDS 74389806 74389893 74389806 ID=Msa0184760-mRNA-1:cds;Parent=Msa0184760-mRNA-1
chr1_4 three_prime_UTR 74389894 74390519 74389894 ID=Msa0184760-mRNA-1:three_prime_utr;Parent=Msa0184760-mRNA-1
Gene Sequence

>Msa0184760

ATGGAGTTTCAGAGACGCCAAGGTCACTGCCTCTCCGAGAGGAAGGGGCAAAAACGTAAGTTAGACGAAGAATTACCGGAAGACCGTCAGATCTCGTCGGCACCGCCTACCGCCGACGAACGTGCGGCACTTCTCGTCGAAGTTGCTAATCAGGTCACCGTTCTCGAGTCTACTTTCACGTGGAATGAAGACGATCGAGCCGCGGCTAAGCGTGCTACTCATGCGCTCGCCGATCTCGCGAAGAATGAGGAAGTTGTGAATGTGATTGTGGAAGGAGGTGCGATTCCGGCTTTGATTAAGCATCTTCAAGCACCGCCTGTTACTGATTGCGTTCAGAAGCCGTTGCCGTTTGAGCATGAAGTTGAGAAAGGGAGTGCTTTCGCATTAGGACTTCTCGCCGTCAAGCCGGAACATCAACAACTAATTGTGGACAGTGGTGCCTTAACACACCTTGTTGATCTTTTAAAGAGGCATAATAATGGTTTGACTTCTCGTGCCATTAATAGTCTCATTCGTAGGGCTGCAGATGCTGTTACTAATCTCGCACATGAGAATAGCAACATTAAAACCCATGTCAGGATGGAAGGTGGAATTCCACCACTTGTTCATTTGCTGGAATTTGCTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCACTGCGAACTCTAGCTTTTAAAAATGATGAAAATAAAATTCAGATTGTTGAATGTGATGCTCTTCCGACTCTGATTCTAATGCTGCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATCGGAAATCTAGTTCACTCATCTCCGAATATAAAGAAAGAGGTTCTATTTGCTGGTGCTTTACAACCAGTTATTGGATTACTTAGCTCACGCTGCCCTGAAAGTCAGAGGGAAGCGGCATTGTTACTTGGACAGTTTGCAGCTACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGTGCTGTCCGACCTTTGATAGAGATGCTTTCGTCTCCTGATGTACAACTTAGAGAAATGTCTGCCTTTGCATTGGGGAGATTGGCCCAGGACACACATAACCAAGCTGGTATTGCACACAATGGTGGTTTAGTGCCACTTCTCAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTCGCTCTTTATGGCCTTGCAGAGAATGAGGATAATGTGTCGGATTTCATTAGGGTAGGTGGAGTTCAAAGACTACAAGAAGGAGAGTTTATTGTTCAAGCGACTAAAGATTGTGTTGCCAAGACATTGAAAAGATTAGAGGAGAAGATTCACGGTCGTGTGTTGAACCATCTGTTATATCTTATGCGAGTTTCAGAAAGGGGTTTTCAAAGGCGAATTGCGTTGGTTCTTGCACATCTTTGCCCTGCAGATGATCAAAGAAGAATTTTTATTGAACACCATGGTCTTGAGTTGCTTATCAGTCTTCTCAGCTCATCCAGCTCCAAACAGCAACTTGATGGTGCTGCGGCTTTATGCAAGTTGGCCAATAAAGCCTCGGCCCTGTCTCCTGTAGACGCCGCTCCTCCTTCTCCAACACCACAGGTTTACTTAGGAGAGCAGTATGTAAACAATGCTACATTGTCGGATGTTACATTTTTGGTTGAAGGCAAACGCTTTTATGCTCATAGAATTTGTCTACTGGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGGGACATAGAGATCCCAAATATTAGATGGGAAGTTTTTGAGTTGATGATGAGATTTATATATACTGGATCAGTTGATATCACTCCAGATATTGCTCAAGACCTTCTTCGAGCAGCTGATCAATATCTTTTAGATGGACTGAAGAGACTCTGTGAGTACACAATTGCACAGGATATATTACTGGAGAACGTGTCAAGTATGTATGAACTTTCAGAAGCCTTCAATGCATTATCATTGAGGCATGCATGCATTCTTTTTATCTTGGAGCACTTTGATAAGTTGAGCGCGAGGCCAGGGCACTCTCTTCTGATTCAGCGTATAATACCAGAGATCCGCAATTACTTTGTTAAAGCTCTTACAAATGCCAACTCCCATAGACTGTAA
Protein sequence

>Msa0184760

MEFQRRQGHCLSERKGQKRKLDEELPEDRQISSAPPTADERAALLVEVANQVTVLESTFTWNEDDRAAAKRATHALADLAKNEEVVNVIVEGGAIPALIKHLQAPPVTDCVQKPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALTHLVDLLKRHNNGLTSRAINSLIRRAADAVTNLAHENSNIKTHVRMEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKIQIVECDALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLFAGALQPVIGLLSSRCPESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLSSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAENEDNVSDFIRVGGVQRLQEGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSERGFQRRIALVLAHLCPADDQRRIFIEHHGLELLISLLSSSSSKQQLDGAAALCKLANKASALSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDITPDIAQDLLRAADQYLLDGLKRLCEYTIAQDILLENVSSMYELSEAFNALSLRHACILFILEHFDKLSARPGHSLLIQRIIPEIRNYFVKALTNANSHRL*