AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0185920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185920 MtrunA17_Chr1g0154031 56.091 394 128 10 3 371 40 413 1.73e-123 362
Msa0185920 MtrunA17_Chr8g0354661 41.009 317 143 7 41 318 37 348 1.42e-61 206
Msa0185920 MtrunA17_Chr3g0080861 39.222 334 145 9 41 329 37 357 4.21e-60 202
Msa0185920 MtrunA17_Chr3g0099131 70.940 117 34 0 39 155 39 155 6.14e-55 189
Msa0185920 MtrunA17_Chr2g0322521 67.227 119 39 0 41 159 29 147 9.75e-49 169
Msa0185920 MtrunA17_Chr1g0192411 46.114 193 93 5 41 229 12 197 5.79e-47 164
Msa0185920 MtrunA17_Chr4g0039971 63.551 107 39 0 38 144 10 116 1.98e-44 156
Msa0185920 MtrunA17_Chr5g0395281 62.617 107 40 0 38 144 9 115 2.14e-43 152
Msa0185920 MtrunA17_Chr5g0440781 44.253 174 80 4 42 214 13 170 3.72e-43 148
Msa0185920 MtrunA17_Chr7g0274581 53.968 126 57 1 41 166 12 136 4.03e-43 149
Msa0185920 MtrunA17_Chr5g0440761 44.253 174 80 4 42 214 13 170 1.19e-42 149
Msa0185920 MtrunA17_Chr5g0441141 44.253 174 80 4 42 214 13 170 1.26e-42 149
Msa0185920 MtrunA17_Chr7g0261281 53.191 141 61 2 41 181 12 147 1.65e-42 149
Msa0185920 MtrunA17_Chr3g0115821 60.748 107 42 0 38 144 9 115 1.70e-42 151
Msa0185920 MtrunA17_Chr5g0410961 60.748 107 42 0 38 144 9 115 4.12e-42 150
Msa0185920 MtrunA17_Chr1g0193371 51.852 135 58 1 41 168 12 146 4.23e-42 150
Msa0185920 MtrunA17_Chr1g0187761 50.376 133 66 0 41 173 12 144 6.95e-42 147
Msa0185920 MtrunA17_Chr1g0203411 57.798 109 46 0 41 149 12 120 8.60e-42 148
Msa0185920 MtrunA17_Chr2g0309911 59.615 104 42 0 41 144 11 114 1.21e-41 148
Msa0185920 MtrunA17_Chr1g0193801 51.429 140 60 2 41 178 12 145 1.69e-41 149
Msa0185920 MtrunA17_Chr1g0186061 60.550 109 43 0 38 146 17 125 3.29e-41 145
Msa0185920 MtrunA17_Chr1g0167691 59.615 104 42 0 41 144 12 115 3.47e-41 145
Msa0185920 MtrunA17_Chr4g0022931 53.782 119 55 0 41 159 13 131 3.62e-41 145
Msa0185920 MtrunA17_Chr7g0270891 49.669 151 67 3 41 189 12 155 4.13e-41 148
Msa0185920 MtrunA17_Chr2g0281071 60.577 104 41 0 41 144 13 116 4.90e-41 147
Msa0185920 MtrunA17_Chr4g0022911 55.000 120 53 1 41 160 13 131 8.73e-41 145
Msa0185920 MtrunA17_Chr1g0168661 54.472 123 51 1 29 146 4 126 1.88e-40 143
Msa0185920 MtrunA17_Chr4g0048511 59.615 104 42 0 41 144 13 116 2.05e-40 146
Msa0185920 MtrunA17_Chr8g0349261 60.000 105 41 1 41 144 13 117 2.57e-40 144
Msa0185920 MtrunA17_Chr1g0167661 49.315 146 70 2 41 182 12 157 3.03e-40 142
Msa0185920 MtrunA17_Chr4g0037141 55.738 122 50 2 43 164 14 131 3.63e-40 143
Msa0185920 MtrunA17_Chr2g0323411 60.577 104 41 0 41 144 12 115 4.44e-40 144
Msa0185920 MtrunA17_Chr4g0022901 55.085 118 52 1 41 158 13 129 4.82e-40 142
Msa0185920 MtrunA17_Chr6g0450101 59.434 106 43 0 41 146 14 119 6.52e-40 140
Msa0185920 MtrunA17_Chr7g0228231 58.491 106 44 0 41 146 14 119 1.29e-39 139
Msa0185920 MtrunA17_Chr1g0209661 55.046 109 49 0 38 146 24 132 2.22e-39 142
Msa0185920 MtrunA17_Chr4g0022881 51.220 123 60 0 42 164 13 135 2.67e-39 139
Msa0185920 MtrunA17_Chr7g0271241 62.245 98 37 0 41 138 12 109 2.75e-39 144
Msa0185920 MtrunA17_Chr2g0328771 56.604 106 46 0 41 146 20 125 3.25e-39 142
Msa0185920 MtrunA17_Chr1g0211161 58.654 104 43 0 41 144 13 116 3.80e-39 139
Msa0185920 MtrunA17_Chr4g0032401 57.547 106 45 0 41 146 17 122 5.36e-39 141
Msa0185920 MtrunA17_Chr4g0058631 59.615 104 42 0 41 144 12 115 6.37e-39 142
Msa0185920 MtrunA17_Chr3g0099141 69.318 88 27 0 38 125 37 124 1.34e-38 135
Msa0185920 MtrunA17_Chr8g0346561 56.481 108 47 0 41 148 12 119 1.52e-38 139
Msa0185920 MtrunA17_Chr2g0323351 54.955 111 50 0 38 148 9 119 1.76e-38 138
Msa0185920 MtrunA17_Chr8g0385321 59.804 102 41 0 43 144 14 115 2.09e-38 139
Msa0185920 MtrunA17_Chr3g0117091 58.654 104 43 0 41 144 12 115 2.43e-38 140
Msa0185920 MtrunA17_Chr1g0194301 56.604 106 46 0 41 146 33 138 2.69e-38 138
Msa0185920 MtrunA17_Chr3g0131121 59.804 102 41 0 43 144 14 115 3.41e-38 139
Msa0185920 MtrunA17_Chr7g0217741 55.769 104 46 0 41 144 12 115 3.55e-38 139
Msa0185920 MtrunA17_Chr8g0387421 56.604 106 46 0 41 146 12 117 4.50e-38 139
Msa0185920 MtrunA17_Chr8g0342541 56.190 105 46 0 41 145 12 116 6.84e-38 139
Msa0185920 MtrunA17_Chr2g0330041 56.731 104 45 0 41 144 12 115 6.91e-38 140
Msa0185920 MtrunA17_Chr4g0070611 55.660 106 47 0 41 146 12 117 6.96e-38 138
Msa0185920 MtrunA17_Chr4g0042671 57.692 104 44 0 41 144 12 115 8.64e-38 140
Msa0185920 MtrunA17_Chr4g0070641 55.660 106 47 0 41 146 12 117 9.26e-38 134
Msa0185920 MtrunA17_Chr7g0275911 54.717 106 48 0 41 146 12 117 1.21e-37 136
Msa0185920 MtrunA17_Chr4g0068061 55.238 105 47 0 41 145 12 116 1.44e-37 138
Msa0185920 MtrunA17_Chr3g0088461 51.282 117 57 0 30 146 11 127 1.55e-37 138
Msa0185920 MtrunA17_Chr8g0342521 55.556 108 48 0 41 148 12 119 1.83e-37 138
Msa0185920 MtrunA17_Chr7g0217221 54.717 106 48 0 41 146 12 117 2.02e-37 135
Msa0185920 MtrunA17_Chr2g0311221 61.616 99 38 0 41 139 14 112 2.45e-37 137
Msa0185920 MtrunA17_Chr5g0441131 50.407 123 60 1 42 163 10 132 2.58e-37 133
Msa0185920 MtrunA17_Chr1g0194291 51.695 118 57 0 29 146 9 126 2.87e-37 135
Msa0185920 MtrunA17_Chr4g0057031 56.731 104 45 0 41 144 12 115 5.46e-37 134
Msa0185920 MtrunA17_Chr3g0110351 55.660 106 47 0 41 146 12 117 6.57e-37 135
Msa0185920 MtrunA17_Chr3g0121241 51.639 122 55 2 41 162 42 159 7.91e-37 135
Msa0185920 MtrunA17_Chr5g0397231 58.586 99 41 0 41 139 12 110 1.14e-36 135
Msa0185920 MtrunA17_Chr6g0453471 55.769 104 46 0 41 144 12 115 1.16e-36 136
Msa0185920 MtrunA17_Chr5g0434571 55.660 106 47 0 41 146 48 153 1.43e-36 135
Msa0185920 MtrunA17_Chr6g0453211 57.576 99 42 0 41 139 12 110 2.87e-36 134
Msa0185920 MtrunA17_Chr5g0435101 51.429 105 51 0 40 144 10 114 3.67e-36 130
Msa0185920 MtrunA17_Chr4g0060721 48.800 125 60 1 41 161 13 137 4.25e-36 134
Msa0185920 MtrunA17_Chr6g0452271 44.681 141 77 1 40 180 11 150 5.45e-36 134
Msa0185920 MtrunA17_Chr8g0334881 50.877 114 55 1 34 146 3 116 6.45e-36 133
Msa0185920 MtrunA17_Chr7g0254411 55.769 104 46 0 41 144 12 115 6.98e-36 133
Msa0185920 MtrunA17_Chr7g0228891 45.652 138 71 1 41 178 12 145 1.12e-35 131
Msa0185920 MtrunA17_Chr3g0103281 54.286 105 48 0 40 144 11 115 1.12e-35 132
Msa0185920 MtrunA17_Chr1g0194951 54.808 104 47 0 41 144 12 115 1.28e-35 133
Msa0185920 MtrunA17_Chr3g0092401 51.887 106 51 0 41 146 13 118 1.42e-35 132
Msa0185920 MtrunA17_Chr4g0013361 51.724 116 54 2 39 153 8 122 1.57e-35 131
Msa0185920 MtrunA17_Chr4g0022891 48.062 129 65 2 41 168 12 139 1.88e-35 130
Msa0185920 MtrunA17_Chr8g0342481 48.201 139 58 4 41 165 12 150 3.05e-35 133
Msa0185920 MtrunA17_Chr5g0417821 56.731 104 45 0 41 144 7 110 3.07e-35 130
Msa0185920 MtrunA17_Chr1g0180391 41.875 160 89 2 39 198 17 172 5.62e-35 128
Msa0185920 MtrunA17_Chr1g0151941 43.243 148 75 3 41 187 12 151 7.61e-35 128
Msa0185920 MtrunA17_Chr4g0044421 54.902 102 46 0 43 144 14 115 9.88e-35 126
Msa0185920 MtrunA17_Chr8g0343831 53.846 104 48 0 41 144 8 111 2.20e-34 127
Msa0185920 MtrunA17_Chr1g0203441 55.769 104 46 0 42 145 14 117 4.67e-34 127
Msa0185920 MtrunA17_Chr1g0152011 51.852 108 51 1 38 144 9 116 9.78e-34 127
Msa0185920 MtrunA17_Chr4g0055981 38.764 178 101 5 40 214 54 226 1.79e-33 124
Msa0185920 MtrunA17_Chr4g0028311 42.105 152 85 3 40 188 11 162 1.79e-33 127
Msa0185920 MtrunA17_Chr6g0470971 53.398 103 48 0 42 144 15 117 2.68e-33 125
Msa0185920 MtrunA17_Chr4g0054391 45.802 131 69 2 38 167 9 138 5.97e-33 124
Msa0185920 MtrunA17_Chr2g0293911 55.963 109 48 0 38 146 21 129 7.47e-33 125
Msa0185920 MtrunA17_Chr5g0400821 45.802 131 67 2 38 167 9 136 7.66e-33 124
Msa0185920 MtrunA17_Chr3g0135311 50.000 108 53 1 38 144 9 116 7.84e-33 125
Msa0185920 MtrunA17_Chr7g0269831 56.190 105 46 0 41 145 12 116 1.71e-32 125
Msa0185920 MtrunA17_Chr4g0068921 57.282 103 44 0 41 143 24 126 2.89e-32 120
Msa0185920 MtrunA17_Chr2g0327821 50.943 106 52 0 41 146 6 111 3.32e-32 121
Msa0185920 MtrunA17_Chr2g0327351 51.456 103 49 1 38 139 9 111 3.47e-31 120
Msa0185920 MtrunA17_Chr4g0030881 50.000 110 48 1 42 144 8 117 8.41e-31 118
Msa0185920 MtrunA17_Chr7g0247131 64.000 75 27 0 73 147 10 84 1.05e-30 118
Msa0185920 MtrunA17_Chr5g0434841 51.429 105 51 0 41 145 20 124 1.08e-30 119
Msa0185920 MtrunA17_Chr7g0264641 45.946 111 59 1 38 147 9 119 2.78e-30 117
Msa0185920 MtrunA17_Chr4g0072751 50.485 103 50 1 38 139 9 111 4.08e-30 118
Msa0185920 MtrunA17_Chr8g0360111 49.505 101 51 0 39 139 23 123 4.26e-30 116
Msa0185920 MtrunA17_Chr5g0434831 48.571 105 54 0 41 145 7 111 1.47e-29 112
Msa0185920 MtrunA17_Chr5g0434931 47.115 104 55 0 41 144 35 138 2.10e-29 114
Msa0185920 MtrunA17_Chr5g0434911 48.077 104 54 0 41 144 21 124 2.54e-29 114
Msa0185920 MtrunA17_Chr6g0487491 46.552 116 53 2 41 147 12 127 2.63e-29 114
Msa0185920 MtrunA17_Chr7g0220341 42.742 124 64 2 41 162 25 143 2.78e-29 114
Msa0185920 MtrunA17_Chr7g0240821 47.059 102 54 0 46 147 6 107 9.90e-29 111
Msa0185920 MtrunA17_Chr5g0429661 47.059 119 59 3 30 146 109 225 1.41e-27 111
Msa0185920 MtrunA17_Chr7g0228991 45.714 105 57 0 41 145 29 133 2.53e-27 108
Msa0185920 MtrunA17_Chr5g0401731 50.980 102 49 1 43 144 15 115 6.70e-27 108
Msa0185920 MtrunA17_Chr7g0228531 39.779 181 87 6 29 189 206 384 8.56e-27 110
Msa0185920 MtrunA17_Chr3g0133601 48.039 102 52 1 43 144 37 137 1.37e-26 105
Msa0185920 MtrunA17_Chr7g0238631 51.923 104 49 1 41 144 111 213 1.37e-26 110
Msa0185920 MtrunA17_Chr6g0454921 45.902 122 59 2 43 158 15 135 7.57e-26 103
Msa0185920 MtrunA17_Chr4g0058991 48.276 116 52 4 41 150 207 320 1.28e-25 107
Msa0185920 MtrunA17_Chr4g0008551 51.456 103 47 2 43 144 38 138 2.48e-25 105
Msa0185920 MtrunA17_Chr2g0294811 49.412 85 43 0 41 125 12 96 2.90e-25 99.0
Msa0185920 MtrunA17_Chr2g0323321 48.235 85 44 0 41 125 11 95 4.03e-25 98.6
Msa0185920 MtrunA17_Chr1g0157731 46.789 109 57 1 41 149 89 196 5.45e-25 107
Msa0185920 MtrunA17_Chr7g0228481 39.205 176 85 6 40 195 217 390 1.29e-24 104
Msa0185920 MtrunA17_Chr5g0395221 51.852 81 39 0 37 117 8 88 1.62e-24 95.9
Msa0185920 MtrunA17_Chr3g0117511 44.828 116 61 2 43 156 183 297 2.03e-24 103
Msa0185920 MtrunA17_Chr4g0053431 47.059 102 53 1 43 144 5 105 2.99e-24 100
Msa0185920 MtrunA17_Chr5g0437321 45.536 112 60 1 28 139 4 114 3.78e-24 100
Msa0185920 MtrunA17_Chr4g0042611 53.247 77 36 0 41 117 12 88 4.88e-24 94.7
Msa0185920 MtrunA17_Chr3g0139671 44.037 109 60 1 41 149 83 190 1.49e-23 102
Msa0185920 MtrunA17_Chr5g0425591 52.439 82 38 1 42 122 10 91 1.94e-23 93.2
Msa0185920 MtrunA17_Chr5g0417621 37.654 162 91 4 23 183 120 272 2.17e-23 100
Msa0185920 MtrunA17_Chr4g0042501 39.726 146 74 4 20 164 88 220 7.72e-23 99.0
Msa0185920 MtrunA17_Chr8g0342511 52.632 76 36 0 41 116 12 87 8.21e-23 91.7
Msa0185920 MtrunA17_Chr6g0453751 46.429 112 47 3 20 122 3 110 1.34e-22 92.4
Msa0185920 MtrunA17_Chr8g0342531 48.750 80 41 0 41 120 12 91 1.98e-22 92.8
Msa0185920 MtrunA17_Chr6g0480581 40.909 110 64 1 43 152 4 112 1.45e-21 92.4
Msa0185920 MtrunA17_Chr7g0254261 39.437 142 80 3 22 162 67 203 2.52e-21 94.0
Msa0185920 MtrunA17_Chr3g0125801 46.296 108 55 2 40 146 13 118 4.86e-21 92.0
Msa0185920 MtrunA17_Chr8g0342461 46.914 81 42 1 41 120 12 92 6.47e-21 87.8
Msa0185920 MtrunA17_Chr8g0342471 46.914 81 42 1 41 120 12 92 1.63e-20 86.7
Msa0185920 MtrunA17_Chr6g0460661 40.385 104 61 1 43 146 16 118 1.78e-20 87.4
Msa0185920 MtrunA17_Chr5g0397841 47.959 98 50 1 41 138 108 204 1.83e-20 92.4
Msa0185920 MtrunA17_Chr7g0228401 48.837 86 43 1 54 139 290 374 2.03e-20 92.4
Msa0185920 MtrunA17_Chr1g0177901 48.276 87 44 1 53 139 4 89 6.52e-20 87.0
Msa0185920 MtrunA17_Chr1g0193901 58.333 84 33 2 41 122 11 94 8.25e-20 84.0
Msa0185920 MtrunA17_Chr1g0193891 58.333 84 33 2 41 122 11 94 8.25e-20 84.0
Msa0185920 MtrunA17_Chr1g0193871 58.333 84 33 2 41 122 11 94 8.25e-20 84.0
Msa0185920 MtrunA17_Chr1g0193881 58.333 84 33 2 41 122 11 94 8.25e-20 84.0
Msa0185920 MtrunA17_Chr7g0233061 40.833 120 57 4 43 159 180 288 1.20e-19 89.4
Msa0185920 MtrunA17_Chr7g0229101 51.429 70 34 0 73 142 4 73 5.01e-19 84.7
Msa0185920 MtrunA17_Chr6g0460671 33.803 142 91 2 43 182 99 239 7.79e-19 86.7
Msa0185920 MtrunA17_Chr7g0238651 39.623 106 62 1 43 146 7 112 8.01e-19 86.7
Msa0185920 MtrunA17_Chr7g0229131 50.704 71 35 0 73 143 4 74 2.20e-18 82.0
Msa0185920 MtrunA17_Chr8g0362231 33.103 145 89 3 46 189 25 162 2.77e-18 85.9
Msa0185920 MtrunA17_Chr3g0093811 50.000 72 36 0 73 144 14 85 7.68e-18 82.4
Msa0185920 MtrunA17_Chr5g0434901 52.308 65 31 0 75 139 7 71 2.18e-17 77.4
Msa0185920 MtrunA17_Chr5g0416341 38.235 102 60 2 46 146 29 128 3.80e-16 79.7
Msa0185920 MtrunA17_Chr7g0233161 52.830 53 24 1 43 95 299 350 4.86e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185920 AT3G11440.2 73.554 121 32 0 35 155 35 155 3.17e-59 199
Msa0185920 AT5G06100.1 54.011 187 83 2 24 208 15 200 2.90e-58 196
Msa0185920 AT3G11440.3 73.554 121 32 0 35 155 35 155 3.15e-58 198
Msa0185920 AT3G11440.4 73.554 121 32 0 35 155 35 155 3.15e-58 198
Msa0185920 AT3G11440.1 73.554 121 32 0 35 155 35 155 3.15e-58 198
Msa0185920 AT5G06100.5 54.011 187 83 2 24 208 15 200 1.31e-57 196
Msa0185920 AT5G06100.2 54.011 187 83 2 24 208 15 200 1.31e-57 196
Msa0185920 AT5G06100.3 54.011 187 83 2 24 208 15 200 1.31e-57 196
Msa0185920 AT5G06100.4 54.011 187 83 2 24 208 15 200 1.31e-57 196
Msa0185920 AT2G26960.1 53.143 175 79 2 28 199 7 181 1.87e-57 193
Msa0185920 AT4G26930.1 65.116 129 45 0 27 155 5 133 5.77e-55 186
Msa0185920 AT2G32460.2 65.354 127 40 1 33 159 2 124 8.12e-55 187
Msa0185920 AT2G32460.1 65.873 126 39 1 34 159 15 136 1.04e-54 187
Msa0185920 AT5G55020.1 69.565 115 35 0 41 155 26 140 1.54e-53 185
Msa0185920 AT3G61250.1 62.500 104 39 0 41 144 12 115 3.96e-44 154
Msa0185920 AT5G16770.4 61.682 107 41 0 38 144 9 115 4.49e-43 152
Msa0185920 AT5G16770.3 61.682 107 41 0 38 144 9 115 4.49e-43 152
Msa0185920 AT3G02940.2 61.682 107 41 0 38 144 9 115 6.13e-43 152
Msa0185920 AT5G16770.1 61.682 107 41 0 38 144 9 115 7.03e-43 152
Msa0185920 AT5G16770.2 61.682 107 41 0 38 144 9 115 7.03e-43 152
Msa0185920 AT5G65230.1 62.617 107 40 0 38 144 9 115 7.48e-43 151
Msa0185920 AT3G02940.1 61.682 107 41 0 38 144 9 115 9.87e-43 151
Msa0185920 AT3G02940.3 61.682 107 41 0 38 144 9 115 9.87e-43 151
Msa0185920 AT4G21440.1 59.813 107 43 0 38 144 9 115 9.46e-42 150
Msa0185920 AT1G57560.1 39.738 229 102 6 41 253 12 220 1.25e-41 148
Msa0185920 AT3G23250.1 47.020 151 80 0 41 191 12 162 2.62e-41 147
Msa0185920 AT1G09540.1 59.434 106 43 0 41 146 12 117 3.57e-41 149
Msa0185920 AT1G57560.2 60.577 104 41 0 41 144 12 115 3.70e-41 146
Msa0185920 AT4G28110.1 60.577 104 41 0 41 144 12 115 6.12e-41 145
Msa0185920 AT3G01530.1 56.364 110 48 0 38 147 22 131 8.07e-41 143
Msa0185920 AT5G26660.1 59.434 106 43 0 41 146 12 117 8.94e-41 147
Msa0185920 AT4G05100.1 59.813 107 43 0 38 144 10 116 1.49e-40 146
Msa0185920 AT5G10280.1 58.879 107 44 0 38 144 9 115 1.78e-40 146
Msa0185920 AT1G34670.1 60.748 107 42 0 38 144 9 115 3.21e-40 146
Msa0185920 AT1G16490.1 45.679 162 87 1 41 202 14 174 3.35e-40 144
Msa0185920 AT3G27810.1 57.273 110 47 0 37 146 16 125 5.53e-40 141
Msa0185920 AT4G38620.1 52.713 129 57 2 43 171 14 138 5.80e-40 143
Msa0185920 AT4G01680.3 50.000 144 64 2 41 182 12 149 6.38e-40 142
Msa0185920 AT3G24310.1 59.091 110 45 0 38 147 15 124 6.85e-40 142
Msa0185920 AT4G34990.1 48.000 150 69 2 43 192 14 154 7.23e-40 142
Msa0185920 AT3G12720.1 56.481 108 47 0 37 144 18 125 9.49e-40 143
Msa0185920 AT5G40350.1 58.491 106 44 0 38 143 14 119 1.15e-39 140
Msa0185920 AT4G13480.1 60.952 105 41 0 42 146 7 111 1.20e-39 142
Msa0185920 AT1G18570.1 59.259 108 44 0 37 144 9 116 1.53e-39 144
Msa0185920 AT4G01680.1 59.434 106 43 0 41 146 12 117 1.61e-39 143
Msa0185920 AT3G30210.1 50.360 139 65 1 42 180 28 162 2.04e-39 141
Msa0185920 AT2G31180.1 45.395 152 80 2 41 190 12 162 2.06e-39 140
Msa0185920 AT3G13540.1 56.731 104 45 0 41 144 23 126 2.57e-39 140
Msa0185920 AT1G22640.1 56.731 104 45 0 41 144 12 115 3.20e-39 140
Msa0185920 AT1G68320.1 39.713 209 108 5 41 240 19 218 6.24e-39 140
Msa0185920 AT5G60890.1 57.798 109 46 0 38 146 9 117 1.05e-38 140
Msa0185920 AT3G13890.2 56.731 104 45 0 41 144 12 115 1.48e-38 141
Msa0185920 AT5G07690.1 58.879 107 43 1 37 143 9 114 1.56e-38 141
Msa0185920 AT1G66230.1 45.806 155 75 2 41 186 12 166 1.75e-38 139
Msa0185920 AT5G07700.1 57.407 108 45 1 37 144 9 115 2.11e-38 140
Msa0185920 AT5G07700.2 57.407 108 45 1 37 144 9 115 2.11e-38 140
Msa0185920 AT5G61420.2 57.407 108 45 1 37 144 9 115 2.25e-38 141
Msa0185920 AT2G16720.1 56.731 104 45 0 41 144 12 115 2.70e-38 138
Msa0185920 AT5G14750.1 52.212 113 54 0 32 144 7 119 4.03e-38 136
Msa0185920 AT1G35515.1 57.692 104 44 0 41 144 12 115 4.81e-38 136
Msa0185920 AT5G12870.1 57.547 106 45 0 41 146 18 123 4.85e-38 138
Msa0185920 AT5G54230.1 55.769 104 46 0 41 144 12 115 4.99e-38 139
Msa0185920 AT3G01140.2 55.140 107 48 0 38 144 9 115 5.86e-38 139
Msa0185920 AT1G06180.1 59.615 104 42 0 41 144 12 115 7.09e-38 137
Msa0185920 AT1G08810.1 45.890 146 77 1 41 186 12 155 7.30e-38 137
Msa0185920 AT4G09460.1 50.000 124 58 1 43 166 14 133 8.29e-38 136
Msa0185920 AT3G01140.1 55.140 107 48 0 38 144 52 158 1.18e-37 140
Msa0185920 AT5G15310.4 55.769 104 46 0 41 144 12 115 2.00e-37 135
Msa0185920 AT5G15310.1 55.769 104 46 0 41 144 12 115 2.18e-37 137
Msa0185920 AT1G79180.1 57.692 104 44 0 41 144 14 117 2.19e-37 137
Msa0185920 AT5G15310.2 55.769 104 46 0 41 144 12 115 2.65e-37 137
Msa0185920 AT4G17785.1 56.731 104 45 0 41 144 13 116 2.73e-37 138
Msa0185920 AT3G47600.1 54.717 106 48 0 41 146 12 117 2.79e-37 137
Msa0185920 AT4G17785.2 56.731 104 45 0 41 144 13 116 2.98e-37 137
Msa0185920 AT1G63910.1 56.604 106 46 0 41 146 12 117 3.07e-37 138
Msa0185920 AT3G08500.1 53.097 113 53 0 34 146 23 135 4.56e-37 137
Msa0185920 AT1G56160.1 54.206 107 49 0 38 144 11 117 6.18e-37 135
Msa0185920 AT2G26950.1 50.833 120 59 0 40 159 15 134 7.69e-37 137
Msa0185920 AT5G49330.1 53.153 111 52 0 41 151 12 122 7.81e-37 136
Msa0185920 AT1G74080.1 59.223 103 42 0 41 143 12 114 8.55e-37 136
Msa0185920 AT5G40330.1 52.294 109 52 0 36 144 7 115 9.27e-37 133
Msa0185920 AT3G28910.1 55.140 107 48 0 38 144 9 115 9.31e-37 135
Msa0185920 AT4G22680.1 46.479 142 72 2 41 182 12 149 1.34e-36 134
Msa0185920 AT5G62470.2 53.774 106 49 0 41 146 12 117 1.78e-36 135
Msa0185920 AT2G47190.1 54.717 106 48 0 41 146 20 125 1.86e-36 134
Msa0185920 AT4G01680.2 53.390 118 43 1 41 146 12 129 4.21e-36 134
Msa0185920 AT5G16600.1 50.000 126 59 2 41 166 12 133 4.33e-36 134
Msa0185920 AT5G52600.1 34.225 187 108 1 37 208 8 194 5.26e-36 130
Msa0185920 AT1G74650.1 54.808 104 47 0 41 144 12 115 6.11e-36 134
Msa0185920 AT1G25340.1 44.898 147 73 2 42 180 19 165 9.95e-36 132
Msa0185920 AT4G12350.1 42.857 182 80 3 41 202 12 189 1.26e-35 132
Msa0185920 AT3G13890.1 52.212 113 45 1 41 144 12 124 1.40e-35 134
Msa0185920 AT2G47460.1 53.846 104 48 0 41 144 12 115 1.56e-35 134
Msa0185920 AT1G48000.1 52.830 106 50 0 41 146 32 137 1.59e-35 130
Msa0185920 AT5G35550.1 54.808 104 47 0 41 144 14 117 1.86e-35 130
Msa0185920 AT5G14340.1 43.976 166 78 4 41 202 24 178 2.48e-35 130
Msa0185920 AT3G27920.1 53.398 103 48 0 42 144 15 117 3.52e-35 129
Msa0185920 AT3G60460.1 53.271 107 49 1 41 146 11 117 3.91e-35 131
Msa0185920 AT5G62470.1 53.774 106 48 1 41 146 12 116 4.49e-35 132
Msa0185920 AT5G56110.1 53.333 105 49 0 40 144 11 115 4.62e-35 131
Msa0185920 AT3G28470.1 53.922 102 47 0 38 139 9 110 1.96e-34 129
Msa0185920 AT4G37780.1 51.887 106 50 1 40 144 11 116 2.46e-34 129
Msa0185920 AT1G74430.1 51.923 104 50 0 41 144 12 115 2.47e-34 128
Msa0185920 AT3G62610.1 52.885 104 49 0 41 144 12 115 4.77e-34 129
Msa0185920 AT5G59780.3 53.333 105 49 0 42 146 9 113 1.05e-33 125
Msa0185920 AT3G46130.1 51.327 113 54 1 42 153 10 122 1.24e-33 125
Msa0185920 AT3G12820.1 54.808 104 47 0 41 144 14 117 1.42e-33 125
Msa0185920 AT3G48920.1 54.902 102 46 0 42 143 19 120 1.50e-33 125
Msa0185920 AT5G57620.1 51.852 108 51 1 38 144 9 116 4.66e-33 126
Msa0185920 AT5G62320.1 42.484 153 79 3 38 183 10 160 2.20e-32 122
Msa0185920 AT1G18710.1 50.962 104 51 0 41 144 12 115 3.82e-32 122
Msa0185920 AT3G06490.1 55.046 109 49 0 38 146 16 124 4.05e-32 123
Msa0185920 AT3G49690.1 50.926 108 52 1 38 144 9 116 4.46e-32 123
Msa0185920 AT3G53200.1 50.000 110 55 0 38 147 6 115 6.71e-32 120
Msa0185920 AT4G25560.1 52.427 103 49 0 42 144 11 113 1.33e-31 121
Msa0185920 AT1G25340.2 42.857 147 71 3 42 180 19 160 2.58e-31 120
Msa0185920 AT5G49620.1 54.128 109 50 0 38 146 23 131 3.74e-31 120
Msa0185920 AT5G65790.1 45.238 126 68 1 38 162 9 134 6.18e-31 121
Msa0185920 AT1G79180.2 43.796 137 44 1 41 144 14 150 6.52e-31 120
Msa0185920 AT5G58850.1 49.153 118 57 2 28 144 90 205 7.07e-31 122
Msa0185920 AT1G25340.3 42.857 147 71 3 42 180 19 160 7.34e-31 119
Msa0185920 AT1G66370.1 49.038 104 53 0 41 144 8 111 1.64e-30 117
Msa0185920 AT5G23000.1 49.524 105 52 1 41 144 12 116 3.87e-30 118
Msa0185920 AT2G36890.1 48.673 113 57 1 38 149 9 121 7.91e-30 116
Msa0185920 AT5G26660.2 67.123 73 24 0 74 146 14 86 8.77e-30 117
Msa0185920 AT2G36890.2 48.673 113 57 1 38 149 50 162 1.36e-29 117
Msa0185920 AT3G27810.2 65.333 75 26 0 72 146 2 76 2.14e-29 112
Msa0185920 AT5G52260.1 52.427 103 49 0 42 144 13 115 4.67e-29 114
Msa0185920 AT5G11050.1 47.826 115 57 2 31 144 93 205 4.15e-28 114
Msa0185920 AT5G40350.2 67.143 70 23 0 74 143 5 74 4.67e-28 108
Msa0185920 AT4G18770.1 48.598 107 54 1 38 144 212 317 6.72e-28 114
Msa0185920 AT5G49620.2 47.967 123 50 1 38 146 23 145 1.18e-27 111
Msa0185920 AT5G02320.1 52.885 104 48 1 41 144 125 227 1.95e-27 114
Msa0185920 AT5G02320.2 52.885 104 48 1 41 144 125 227 1.95e-27 114
Msa0185920 AT1G56650.1 46.789 109 58 0 36 144 3 111 2.22e-27 108
Msa0185920 AT1G66380.1 40.146 137 82 0 36 172 3 139 2.26e-27 105
Msa0185920 AT5G02320.3 52.885 104 48 1 41 144 65 167 2.39e-27 113
Msa0185920 AT2G23290.1 51.961 102 48 1 43 144 13 113 8.49e-27 108
Msa0185920 AT1G66390.1 46.789 109 58 0 36 144 3 111 1.40e-26 106
Msa0185920 AT3G09370.1 50.943 106 49 2 41 145 128 231 2.39e-26 110
Msa0185920 AT3G09370.2 50.943 106 49 2 41 145 133 236 2.42e-26 110
Msa0185920 AT3G09370.3 50.000 110 52 2 41 149 141 248 3.98e-26 109
Msa0185920 AT3G27785.1 47.273 110 56 2 38 146 184 292 6.17e-26 108
Msa0185920 AT4G37260.1 50.000 102 50 1 43 144 13 113 8.50e-26 106
Msa0185920 AT3G46130.3 57.317 82 34 1 73 153 9 90 9.02e-26 103
Msa0185920 AT3G09230.1 47.788 113 57 2 32 144 45 155 1.33e-25 107
Msa0185920 AT5G40360.1 38.255 149 84 4 41 186 156 299 1.55e-25 106
Msa0185920 AT3G46130.4 58.025 81 33 1 74 153 20 100 2.19e-25 103
Msa0185920 AT3G53200.2 60.811 74 29 0 74 147 9 82 2.28e-25 102
Msa0185920 AT5G35550.2 47.706 109 35 3 53 161 43 129 2.56e-25 103
Msa0185920 AT1G69560.1 44.828 116 61 2 32 146 96 209 3.06e-25 105
Msa0185920 AT1G69560.2 44.828 116 61 2 32 146 112 225 3.27e-25 105
Msa0185920 AT5G59780.2 60.274 73 29 0 74 146 20 92 4.07e-25 102
Msa0185920 AT4G33450.1 41.129 124 72 1 26 149 2 124 4.45e-25 102
Msa0185920 AT3G12820.2 66.176 68 23 0 77 144 2 69 4.64e-25 101
Msa0185920 AT3G55730.1 48.544 103 50 2 43 144 56 156 5.61e-24 102
Msa0185920 AT3G50060.1 44.954 109 59 1 43 151 6 113 9.36e-24 100
Msa0185920 AT2G39880.1 42.400 125 69 2 21 144 28 150 1.03e-23 101
Msa0185920 AT5G17800.1 48.077 104 53 1 43 146 93 195 1.32e-23 100
Msa0185920 AT3G47600.2 57.534 73 31 0 74 146 39 111 1.44e-23 100
Msa0185920 AT4G32730.5 46.154 104 55 1 41 144 85 187 1.62e-23 102
Msa0185920 AT4G32730.4 46.154 104 55 1 41 144 85 187 1.62e-23 102
Msa0185920 AT4G32730.3 46.154 104 55 1 41 144 85 187 1.62e-23 102
Msa0185920 AT4G32730.2 46.154 104 55 1 41 144 85 187 1.62e-23 102
Msa0185920 AT4G32730.1 46.154 104 55 1 41 144 85 187 1.65e-23 102
Msa0185920 AT1G26780.1 45.133 113 59 2 41 152 96 206 3.88e-23 98.2
Msa0185920 AT1G17950.1 44.643 112 59 2 43 153 5 114 3.90e-23 97.4
Msa0185920 AT1G26780.2 45.133 113 59 2 41 152 96 206 4.32e-23 99.4
Msa0185920 AT5G11510.3 43.269 104 58 1 41 144 79 181 5.09e-23 101
Msa0185920 AT5G11510.3 38.144 97 58 2 43 138 29 124 8.49e-12 67.4
Msa0185920 AT5G11510.1 43.269 104 58 1 41 144 79 181 5.09e-23 101
Msa0185920 AT5G11510.1 38.144 97 58 2 43 138 29 124 8.49e-12 67.4
Msa0185920 AT5G11510.4 43.269 104 58 1 41 144 79 181 5.09e-23 101
Msa0185920 AT5G11510.4 38.144 97 58 2 43 138 29 124 8.49e-12 67.4
Msa0185920 AT5G67300.1 47.059 102 53 1 43 144 6 106 5.93e-23 98.2
Msa0185920 AT5G11510.2 43.269 104 58 1 41 144 79 181 6.90e-23 100
Msa0185920 AT5G11510.2 38.144 97 58 2 43 138 29 124 9.78e-12 67.0
Msa0185920 AT5G11510.5 43.269 104 58 1 41 144 79 181 7.29e-23 100
Msa0185920 AT5G11510.5 38.144 97 58 2 43 138 29 124 1.04e-11 67.0
Msa0185920 AT5G14750.3 50.633 79 34 1 71 144 7 85 1.16e-22 94.0
Msa0185920 AT3G29020.1 41.964 112 64 1 43 154 65 175 7.83e-22 93.6
Msa0185920 AT3G29020.2 41.964 112 64 1 43 154 67 177 1.07e-21 94.7
Msa0185920 AT1G73410.1 47.619 105 52 2 43 146 6 108 2.19e-21 92.4
Msa0185920 AT4G00540.2 48.148 108 52 2 40 144 100 206 2.19e-21 95.1
Msa0185920 AT1G73410.2 47.619 105 52 2 43 146 6 108 3.50e-21 90.9
Msa0185920 AT4G00540.1 48.148 108 52 2 40 144 98 204 3.71e-21 94.7
Msa0185920 AT2G25230.1 43.810 105 54 4 41 143 24 125 9.88e-20 87.4
Msa0185920 AT3G23250.2 42.308 104 60 0 88 191 2 105 3.86e-19 85.9
Msa0185920 AT1G66380.3 39.604 101 61 0 72 172 6 106 1.40e-18 80.9
Msa0185920 AT2G37630.1 38.318 107 64 1 42 146 3 109 9.57e-18 84.0
Msa0185920 AT1G18960.1 40.741 108 55 3 40 144 7 108 1.90e-17 82.4
Msa0185920 AT1G22640.3 59.649 57 23 0 88 144 2 58 2.01e-17 80.5
Msa0185920 AT5G40430.1 37.864 103 62 2 41 143 52 152 2.92e-16 78.2
Msa0185920 AT1G66380.2 43.373 83 47 0 36 118 3 85 1.44e-15 72.4
Msa0185920 AT1G14350.2 33.051 118 76 2 46 162 28 143 6.29e-15 76.3
Msa0185920 AT1G14350.1 33.051 118 76 2 46 162 28 143 6.29e-15 76.3
Msa0185920 AT5G39700.1 38.835 103 62 1 44 146 57 158 6.88e-15 72.8
Msa0185920 AT2G02820.2 35.294 102 63 2 46 146 33 132 1.43e-14 75.5
Msa0185920 AT2G02820.1 35.294 102 63 2 46 146 33 132 1.82e-14 74.7
Msa0185920 AT1G71030.2 37.000 100 54 2 80 171 5 103 2.64e-14 70.9
Msa0185920 AT2G02820.3 35.294 102 63 2 46 146 33 132 3.42e-14 73.2
Msa0185920 AT1G71030.1 37.000 100 54 2 80 171 19 117 4.00e-14 70.9
Msa0185920 AT5G14750.4 46.552 58 31 0 87 144 1 58 9.79e-14 68.6
Msa0185920 AT5G14750.2 46.552 58 31 0 87 144 1 58 9.79e-14 68.6
Msa0185920 AT4G25560.2 63.043 46 17 0 99 144 2 47 1.21e-13 70.1
Msa0185920 AT3G46130.2 55.357 56 24 1 99 153 1 56 4.18e-13 67.8
Msa0185920 AT5G59780.1 58.333 48 20 0 99 146 1 48 7.09e-13 66.6
Msa0185920 AT1G16490.2 40.860 93 52 2 110 202 16 105 7.68e-11 61.6

Find 92 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCTTGATACTGATTAAA+TGG 0.178035 2_1:-521068 None:intergenic
CGTTTGGATCTTGTCTCTTC+AGG 0.208350 2_1:-520774 None:intergenic
ACTTTAAGATGGGAAATAAA+TGG 0.224965 2_1:+520123 Msa0185920:CDS
ATAATGAGATAAAGAACTTT+TGG 0.307361 2_1:+520706 Msa0185920:CDS
TGTACTAACGTCCGCTTCAT+TGG 0.316028 2_1:-521294 None:intergenic
GAGCAAGTCCTGTATACTTT+TGG 0.318083 2_1:-519998 None:intergenic
AATGGAGGAGACCACATAAT+AGG 0.371722 2_1:-521050 None:intergenic
ATTCTCATTCAATGGTCGTT+TGG 0.375529 2_1:-520790 None:intergenic
AAAAGCACGGAGAGGGAAAT+TGG 0.378253 2_1:+519967 Msa0185920:CDS
TTCTGTTTCATCACTCTGGC+TGG 0.390038 2_1:-520844 None:intergenic
TTCTCAGATCTGGTCTCAAA+TGG 0.391193 2_1:-520055 None:intergenic
ACGCACTGATCAAATGTTGC+TGG 0.392108 2_1:-521020 None:intergenic
TCAAGGATATAATAACCTTC+TGG 0.408307 2_1:+521082 Msa0185920:CDS
AATGTTGAGTCGGCAAATAT+TGG 0.418339 2_1:-521154 None:intergenic
TGCCGACTCAACATTATAGC+TGG 0.418409 2_1:+521162 Msa0185920:CDS
CTTTAAGATGGGAAATAAAT+GGG 0.426188 2_1:+520124 Msa0185920:CDS
CCTGGAGTTGCACTTTAAGA+TGG 0.429054 2_1:+520112 Msa0185920:CDS
ATTGCACCCTTTCTCAGATC+TGG 0.432449 2_1:-520065 None:intergenic
GTTTGGATCTTGTCTCTTCA+GGG 0.433628 2_1:-520773 None:intergenic
CCACTCATTTGAAACCCCTT+AGG 0.435707 2_1:+521415 Msa0185920:CDS
GTACTAACGTCCGCTTCATT+GGG 0.439957 2_1:-521293 None:intergenic
GCAAGTGAAAACTGAAACTA+CGG 0.440655 2_1:+521268 Msa0185920:CDS
AACATGGTGGTATTATATCT+TGG 0.446158 2_1:-520911 None:intergenic
ATGGGCTCAAATTGCTGCAC+TGG 0.463822 2_1:+520142 Msa0185920:CDS
ATATGGGGAAGTGGCTTGCT+TGG 0.464849 2_1:+520939 Msa0185920:CDS
CGCACTGATCAAATGTTGCT+GGG 0.465673 2_1:-521019 None:intergenic
TAAAGTGCAACTCCAGGATT+CGG 0.469027 2_1:-520106 None:intergenic
CTTGTCTCTTCAGGGTAGAC+TGG 0.469473 2_1:-520765 None:intergenic
TGAAGAAGAACGCCGAATCC+TGG 0.469699 2_1:+520094 Msa0185920:CDS
TAATCTTTGAATTCCACGTC+AGG 0.479263 2_1:-520879 None:intergenic
CAAGGAGATAGCACTGGAAG+AGG 0.483885 2_1:+519876 Msa0185920:CDS
GCCGACTCAACATTATAGCT+GGG 0.487345 2_1:+521163 Msa0185920:CDS
ATGAACATGTGGTCAATTGA+TGG 0.488357 2_1:+521389 Msa0185920:CDS
ATACAGGACTTGCTCGTTGT+GGG 0.490375 2_1:+520006 Msa0185920:CDS
CCTAAGGGGTTTCAAATGAG+TGG 0.492160 2_1:-521415 None:intergenic
GAAGTTAGAACTGACTGATA+AGG 0.499006 2_1:-521224 None:intergenic
CCATCTTAAAGTGCAACTCC+AGG 0.502442 2_1:-520112 None:intergenic
CCTCCATTTAATCAGTATCA+AGG 0.502555 2_1:+521065 Msa0185920:CDS
TCAACATGCAATAATTTGTA+CGG 0.506808 2_1:+520975 Msa0185920:CDS
ACTGACTGATAAGGCTCAAA+CGG 0.514238 2_1:-521215 None:intergenic
ATCTCATTATCTGTACGTCC+AGG 0.519210 2_1:-520693 None:intergenic
AGCGGACGTTAGTACACAAT+GGG 0.522305 2_1:+521301 Msa0185920:CDS
CTGGAGTTGCACTTTAAGAT+GGG 0.525909 2_1:+520113 Msa0185920:CDS
GCGGGGATGATGATCGCAAA+AGG 0.526243 2_1:+519811 Msa0185920:CDS
ACTTGCAATGAATCAAGTAA+AGG 0.526899 2_1:-521251 None:intergenic
TGAGTAGTAGCGCTTCAAGC+GGG 0.531285 2_1:+519793 Msa0185920:CDS
AGGTCAATGGACGTCGGCAG+AGG 0.533018 2_1:+519920 Msa0185920:CDS
GGAGATAGCACTGGAAGAGG+AGG 0.540564 2_1:+519879 Msa0185920:CDS
GTAGTCTAAAGAAAGGTCAA+TGG 0.541083 2_1:+519907 Msa0185920:CDS
AGCACTGGAAGAGGAGGCGA+AGG 0.541480 2_1:+519885 Msa0185920:CDS
AGTGCAGTCCAAAAGTATAC+AGG 0.543711 2_1:+519990 Msa0185920:CDS
GGTGATCAAGGAGATAGCAC+TGG 0.545815 2_1:+519870 Msa0185920:CDS
CTAAGGGGTTTCAAATGAGT+GGG 0.547400 2_1:-521414 None:intergenic
TCAGCTGAAGAAGGTGATCA+AGG 0.548656 2_1:+519858 Msa0185920:CDS
GTCGGCAAATATTGGAGTGA+AGG 0.550626 2_1:-521146 None:intergenic
GCGTAAAATATCCTATTATG+TGG 0.558409 2_1:+521039 Msa0185920:CDS
GGAAAAGCTGTCGTCTACGA+TGG 0.558748 2_1:+520027 Msa0185920:CDS
GGCTTCATTTGTGAATGTGT+CGG 0.559589 2_1:-520823 None:intergenic
TATACAGGACTTGCTCGTTG+TGG 0.562241 2_1:+520005 Msa0185920:CDS
TGATAAGGCTCAAACGGAGG+AGG 0.565885 2_1:-521209 None:intergenic
TTTGAGACCAGATCTGAGAA+AGG 0.567901 2_1:+520058 Msa0185920:CDS
GGCGAAGGTAGTCTAAAGAA+AGG 0.568294 2_1:+519900 Msa0185920:CDS
TGCAATGAATCAAGTAAAGG+TGG 0.569110 2_1:-521248 None:intergenic
TCGGCAAATATTGGAGTGAA+GGG 0.572453 2_1:-521145 None:intergenic
TTGAGACCAGATCTGAGAAA+GGG 0.574614 2_1:+520059 Msa0185920:CDS
TCATCATTATCAGCTGAAGA+AGG 0.578816 2_1:+519849 Msa0185920:CDS
GGATATAATAACCTTCTGGT+TGG 0.584404 2_1:+521086 Msa0185920:CDS
AACTACGGCGCCCAATGAAG+CGG 0.599129 2_1:+521283 Msa0185920:CDS
GAAAAGCTGTCGTCTACGAT+GGG 0.599406 2_1:+520028 Msa0185920:CDS
AACATATGAACATGAACATG+TGG 0.606750 2_1:+521378 Msa0185920:CDS
CCCCAGCTATAATGTTGAGT+CGG 0.606756 2_1:-521164 None:intergenic
GACTGATAAGGCTCAAACGG+AGG 0.611541 2_1:-521212 None:intergenic
ATGGTGGTATTATATCTTGG+CGG 0.611730 2_1:-520908 None:intergenic
TGAACATGTGGTCAATTGAT+GGG 0.617705 2_1:+521390 Msa0185920:CDS
AAGCAGCAGACTGATCGTCT+AGG 0.617912 2_1:-521328 None:intergenic
CTTCCCCATATATCAAAACA+TGG 0.619452 2_1:-520927 None:intergenic
GAGTAGTAGCGCTTCAAGCG+GGG 0.620246 2_1:+519794 Msa0185920:CDS
AGCAGACTGATCGTCTAGGT+CGG 0.624556 2_1:-521324 None:intergenic
CCGACTCAACATTATAGCTG+GGG 0.629104 2_1:+521164 Msa0185920:CDS
TCTTCAGCTGATAATGATGA+CGG 0.637908 2_1:-519846 None:intergenic
AAATTTGAGTATACCTGACG+TGG 0.639048 2_1:+520866 Msa0185920:CDS
AAGCGGACGTTAGTACACAA+TGG 0.647493 2_1:+521300 Msa0185920:CDS
CCTTGATACTGATTAAATGG+AGG 0.659431 2_1:-521065 None:intergenic
ATGAGTAGTAGCGCTTCAAG+CGG 0.659631 2_1:+519792 Msa0185920:CDS
TGGCATGAATACCAACCAGA+AGG 0.663992 2_1:-521097 None:intergenic
GGAGGAGGCTGAATCAACGC+AGG 0.679803 2_1:-521194 None:intergenic
AATGACATGCTAAACCTAAG+GGG 0.680724 2_1:-521429 None:intergenic
AAAGAAAGGTCAATGGACGT+CGG 0.691272 2_1:+519914 Msa0185920:CDS
TAAGGGGTTTCAAATGAGTG+GGG 0.702140 2_1:-521413 None:intergenic
AGAAGAAGAAATATTTGACG+TGG 0.709758 2_1:-521117 None:intergenic
CCCCATATATCAAAACATGG+TGG 0.724758 2_1:-520924 None:intergenic
GATCGCAAAAGGCTAAAGCG+CGG 0.744667 2_1:+519822 Msa0185920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATGAATAAAAAATATA+TGG - chr2_1:520234-520253 None:intergenic 10.0%
!! GAAAATGAATAAAAAATATA+TGG - chr2_1:520234-520253 None:intergenic 10.0%
!! GAATAAAAAATATATGGATA+AGG - chr2_1:520228-520247 None:intergenic 15.0%
!! GAATAAAAAATATATGGATA+AGG - chr2_1:520228-520247 None:intergenic 15.0%
!!! ATAATGAGATAAAGAACTTT+TGG + chr2_1:520706-520725 Msa0185920:CDS 20.0%
!!! ATAATGAGATAAAGAACTTT+TGG + chr2_1:520706-520725 Msa0185920:CDS 20.0%
!!! ACTTTAAGATGGGAAATAAA+TGG + chr2_1:520123-520142 Msa0185920:CDS 25.0%
!!! CTTTAAGATGGGAAATAAAT+GGG + chr2_1:520124-520143 Msa0185920:CDS 25.0%
! ATATATCAAGTGCATAACAA+GGG - chr2_1:520406-520425 None:intergenic 25.0%
! AATATATCAAGTGCATAACA+AGG - chr2_1:520407-520426 None:intergenic 25.0%
!! TAGAAAGTATATGCAAAAAC+TGG - chr2_1:520629-520648 None:intergenic 25.0%
!! AGTTTTTGCATATACTTTCT+AGG + chr2_1:520628-520647 Msa0185920:intron 25.0%
! AAGAAAAAGGAATGAACATA+AGG - chr2_1:520660-520679 None:intergenic 25.0%
! CAACTGAATAGAAAAGAAAA+AGG - chr2_1:520673-520692 None:intergenic 25.0%
!! TTTTCTTGATTCTCATTCAA+TGG - chr2_1:520801-520820 None:intergenic 25.0%
!! TCAACATGCAATAATTTGTA+CGG + chr2_1:520975-520994 Msa0185920:CDS 25.0%
!! TATCCTTGATACTGATTAAA+TGG - chr2_1:521071-521090 None:intergenic 25.0%
!!! ACTTTAAGATGGGAAATAAA+TGG + chr2_1:520123-520142 Msa0185920:CDS 25.0%
!!! CTTTAAGATGGGAAATAAAT+GGG + chr2_1:520124-520143 Msa0185920:CDS 25.0%
! ATATATCAAGTGCATAACAA+GGG - chr2_1:520406-520425 None:intergenic 25.0%
! AATATATCAAGTGCATAACA+AGG - chr2_1:520407-520426 None:intergenic 25.0%
!! TAGAAAGTATATGCAAAAAC+TGG - chr2_1:520629-520648 None:intergenic 25.0%
!! AGTTTTTGCATATACTTTCT+AGG + chr2_1:520628-520647 Msa0185920:intron 25.0%
! AAGAAAAAGGAATGAACATA+AGG - chr2_1:520660-520679 None:intergenic 25.0%
! CAACTGAATAGAAAAGAAAA+AGG - chr2_1:520673-520692 None:intergenic 25.0%
!! TTTTCTTGATTCTCATTCAA+TGG - chr2_1:520801-520820 None:intergenic 25.0%
!! TCAACATGCAATAATTTGTA+CGG + chr2_1:520975-520994 Msa0185920:CDS 25.0%
!! TATCCTTGATACTGATTAAA+TGG - chr2_1:521071-521090 None:intergenic 25.0%
ATAGCTCATGTTAAAAAGCA+CGG + chr2_1:519954-519973 Msa0185920:CDS 30.0%
!! CATAGCTTTTGTTGATTATC+TGG + chr2_1:520294-520313 Msa0185920:intron 30.0%
TACGTACTCTCTTATGTAAA+TGG + chr2_1:520468-520487 Msa0185920:intron 30.0%
! AATTTTCTGTTTCATCACTC+TGG - chr2_1:520851-520870 None:intergenic 30.0%
AACATGGTGGTATTATATCT+TGG - chr2_1:520914-520933 None:intergenic 30.0%
!!! TACCACCATGTTTTGATATA+TGG + chr2_1:520922-520941 Msa0185920:CDS 30.0%
!!! ACCACCATGTTTTGATATAT+GGG + chr2_1:520923-520942 Msa0185920:CDS 30.0%
GCGTAAAATATCCTATTATG+TGG + chr2_1:521039-521058 Msa0185920:CDS 30.0%
TCAAGGATATAATAACCTTC+TGG + chr2_1:521082-521101 Msa0185920:CDS 30.0%
AGAAGAAGAAATATTTGACG+TGG - chr2_1:521120-521139 None:intergenic 30.0%
ACTTGCAATGAATCAAGTAA+AGG - chr2_1:521254-521273 None:intergenic 30.0%
AACATATGAACATGAACATG+TGG + chr2_1:521378-521397 Msa0185920:CDS 30.0%
ATAGCTCATGTTAAAAAGCA+CGG + chr2_1:519954-519973 Msa0185920:CDS 30.0%
!! CATAGCTTTTGTTGATTATC+TGG + chr2_1:520294-520313 Msa0185920:intron 30.0%
TACGTACTCTCTTATGTAAA+TGG + chr2_1:520468-520487 Msa0185920:intron 30.0%
! AATTTTCTGTTTCATCACTC+TGG - chr2_1:520851-520870 None:intergenic 30.0%
AACATGGTGGTATTATATCT+TGG - chr2_1:520914-520933 None:intergenic 30.0%
!!! TACCACCATGTTTTGATATA+TGG + chr2_1:520922-520941 Msa0185920:CDS 30.0%
!!! ACCACCATGTTTTGATATAT+GGG + chr2_1:520923-520942 Msa0185920:CDS 30.0%
GCGTAAAATATCCTATTATG+TGG + chr2_1:521039-521058 Msa0185920:CDS 30.0%
TCAAGGATATAATAACCTTC+TGG + chr2_1:521082-521101 Msa0185920:CDS 30.0%
AGAAGAAGAAATATTTGACG+TGG - chr2_1:521120-521139 None:intergenic 30.0%
ACTTGCAATGAATCAAGTAA+AGG - chr2_1:521254-521273 None:intergenic 30.0%
AACATATGAACATGAACATG+TGG + chr2_1:521378-521397 Msa0185920:CDS 30.0%
! TCTTCAGCTGATAATGATGA+CGG - chr2_1:519849-519868 None:intergenic 35.0%
TCATCATTATCAGCTGAAGA+AGG + chr2_1:519849-519868 Msa0185920:CDS 35.0%
GTAGTCTAAAGAAAGGTCAA+TGG + chr2_1:519907-519926 Msa0185920:CDS 35.0%
TCTATGCACTCCTTAATCTA+TGG + chr2_1:520437-520456 Msa0185920:intron 35.0%
TAATGACCCTCCATAGATTA+AGG - chr2_1:520450-520469 None:intergenic 35.0%
CATGTTCATTCCAATGAGAA+AGG - chr2_1:520498-520517 None:intergenic 35.0%
ACACACAAGTAATAGTTACC+AGG - chr2_1:520588-520607 None:intergenic 35.0%
! TTCTTTTCTATTCAGTTGCC+TGG + chr2_1:520675-520694 Msa0185920:intron 35.0%
ATTCTCATTCAATGGTCGTT+TGG - chr2_1:520793-520812 None:intergenic 35.0%
AAATTTGAGTATACCTGACG+TGG + chr2_1:520866-520885 Msa0185920:CDS 35.0%
TAATCTTTGAATTCCACGTC+AGG - chr2_1:520882-520901 None:intergenic 35.0%
ATGGTGGTATTATATCTTGG+CGG - chr2_1:520911-520930 None:intergenic 35.0%
!!! CCACCATGTTTTGATATATG+GGG + chr2_1:520924-520943 Msa0185920:CDS 35.0%
CTTCCCCATATATCAAAACA+TGG - chr2_1:520930-520949 None:intergenic 35.0%
!!! TGTTTTGATATATGGGGAAG+TGG + chr2_1:520930-520949 Msa0185920:CDS 35.0%
! CCTTGATACTGATTAAATGG+AGG - chr2_1:521068-521087 None:intergenic 35.0%
CCTCCATTTAATCAGTATCA+AGG + chr2_1:521065-521084 Msa0185920:CDS 35.0%
GGATATAATAACCTTCTGGT+TGG + chr2_1:521086-521105 Msa0185920:CDS 35.0%
AATGTTGAGTCGGCAAATAT+TGG - chr2_1:521157-521176 None:intergenic 35.0%
GAAGTTAGAACTGACTGATA+AGG - chr2_1:521227-521246 None:intergenic 35.0%
TGCAATGAATCAAGTAAAGG+TGG - chr2_1:521251-521270 None:intergenic 35.0%
GCAAGTGAAAACTGAAACTA+CGG + chr2_1:521268-521287 Msa0185920:CDS 35.0%
ATGAACATGTGGTCAATTGA+TGG + chr2_1:521389-521408 Msa0185920:CDS 35.0%
TGAACATGTGGTCAATTGAT+GGG + chr2_1:521390-521409 Msa0185920:CDS 35.0%
! TCTTCAGCTGATAATGATGA+CGG - chr2_1:519849-519868 None:intergenic 35.0%
TCATCATTATCAGCTGAAGA+AGG + chr2_1:519849-519868 Msa0185920:CDS 35.0%
GTAGTCTAAAGAAAGGTCAA+TGG + chr2_1:519907-519926 Msa0185920:CDS 35.0%
TCTATGCACTCCTTAATCTA+TGG + chr2_1:520437-520456 Msa0185920:intron 35.0%
TAATGACCCTCCATAGATTA+AGG - chr2_1:520450-520469 None:intergenic 35.0%
CATGTTCATTCCAATGAGAA+AGG - chr2_1:520498-520517 None:intergenic 35.0%
ACACACAAGTAATAGTTACC+AGG - chr2_1:520588-520607 None:intergenic 35.0%
! TTCTTTTCTATTCAGTTGCC+TGG + chr2_1:520675-520694 Msa0185920:intron 35.0%
ATTCTCATTCAATGGTCGTT+TGG - chr2_1:520793-520812 None:intergenic 35.0%
AAATTTGAGTATACCTGACG+TGG + chr2_1:520866-520885 Msa0185920:CDS 35.0%
TAATCTTTGAATTCCACGTC+AGG - chr2_1:520882-520901 None:intergenic 35.0%
ATGGTGGTATTATATCTTGG+CGG - chr2_1:520911-520930 None:intergenic 35.0%
!!! CCACCATGTTTTGATATATG+GGG + chr2_1:520924-520943 Msa0185920:CDS 35.0%
CTTCCCCATATATCAAAACA+TGG - chr2_1:520930-520949 None:intergenic 35.0%
!!! TGTTTTGATATATGGGGAAG+TGG + chr2_1:520930-520949 Msa0185920:CDS 35.0%
! CCTTGATACTGATTAAATGG+AGG - chr2_1:521068-521087 None:intergenic 35.0%
CCTCCATTTAATCAGTATCA+AGG + chr2_1:521065-521084 Msa0185920:CDS 35.0%
GGATATAATAACCTTCTGGT+TGG + chr2_1:521086-521105 Msa0185920:CDS 35.0%
AATGTTGAGTCGGCAAATAT+TGG - chr2_1:521157-521176 None:intergenic 35.0%
GAAGTTAGAACTGACTGATA+AGG - chr2_1:521227-521246 None:intergenic 35.0%
TGCAATGAATCAAGTAAAGG+TGG - chr2_1:521251-521270 None:intergenic 35.0%
GCAAGTGAAAACTGAAACTA+CGG + chr2_1:521268-521287 Msa0185920:CDS 35.0%
ATGAACATGTGGTCAATTGA+TGG + chr2_1:521389-521408 Msa0185920:CDS 35.0%
TGAACATGTGGTCAATTGAT+GGG + chr2_1:521390-521409 Msa0185920:CDS 35.0%
AAAGAAAGGTCAATGGACGT+CGG + chr2_1:519914-519933 Msa0185920:CDS 40.0%
! TCATGTTAAAAAGCACGGAG+AGG + chr2_1:519959-519978 Msa0185920:CDS 40.0%
! CATGTTAAAAAGCACGGAGA+GGG + chr2_1:519960-519979 Msa0185920:CDS 40.0%
! AGTGCAGTCCAAAAGTATAC+AGG + chr2_1:519990-520009 Msa0185920:CDS 40.0%
! GAGCAAGTCCTGTATACTTT+TGG - chr2_1:520001-520020 None:intergenic 40.0%
TTCTCAGATCTGGTCTCAAA+TGG - chr2_1:520058-520077 None:intergenic 40.0%
! TTTGAGACCAGATCTGAGAA+AGG + chr2_1:520058-520077 Msa0185920:CDS 40.0%
TTGAGACCAGATCTGAGAAA+GGG + chr2_1:520059-520078 Msa0185920:CDS 40.0%
TAAAGTGCAACTCCAGGATT+CGG - chr2_1:520109-520128 None:intergenic 40.0%
!! CTGGAGTTGCACTTTAAGAT+GGG + chr2_1:520113-520132 Msa0185920:CDS 40.0%
ATGCACTCCTTAATCTATGG+AGG + chr2_1:520440-520459 Msa0185920:intron 40.0%
TGCACTCCTTAATCTATGGA+GGG + chr2_1:520441-520460 Msa0185920:intron 40.0%
! AAATGGAGCACCTTTCTCAT+TGG + chr2_1:520485-520504 Msa0185920:intron 40.0%
CATTACTTCTTAATTGCGCC+TGG + chr2_1:520567-520586 Msa0185920:intron 40.0%
ATCTCATTATCTGTACGTCC+AGG - chr2_1:520696-520715 None:intergenic 40.0%
GTTTGGATCTTGTCTCTTCA+GGG - chr2_1:520776-520795 None:intergenic 40.0%
GGCTTCATTTGTGAATGTGT+CGG - chr2_1:520826-520845 None:intergenic 40.0%
CCCCATATATCAAAACATGG+TGG - chr2_1:520927-520946 None:intergenic 40.0%
AATGGAGGAGACCACATAAT+AGG - chr2_1:521053-521072 None:intergenic 40.0%
TCGGCAAATATTGGAGTGAA+GGG - chr2_1:521148-521167 None:intergenic 40.0%
ACTGACTGATAAGGCTCAAA+CGG - chr2_1:521218-521237 None:intergenic 40.0%
TAAGGGGTTTCAAATGAGTG+GGG - chr2_1:521416-521435 None:intergenic 40.0%
CTAAGGGGTTTCAAATGAGT+GGG - chr2_1:521417-521436 None:intergenic 40.0%
AAAGAAAGGTCAATGGACGT+CGG + chr2_1:519914-519933 Msa0185920:CDS 40.0%
! TCATGTTAAAAAGCACGGAG+AGG + chr2_1:519959-519978 Msa0185920:CDS 40.0%
! CATGTTAAAAAGCACGGAGA+GGG + chr2_1:519960-519979 Msa0185920:CDS 40.0%
! AGTGCAGTCCAAAAGTATAC+AGG + chr2_1:519990-520009 Msa0185920:CDS 40.0%
! GAGCAAGTCCTGTATACTTT+TGG - chr2_1:520001-520020 None:intergenic 40.0%
TTCTCAGATCTGGTCTCAAA+TGG - chr2_1:520058-520077 None:intergenic 40.0%
! TTTGAGACCAGATCTGAGAA+AGG + chr2_1:520058-520077 Msa0185920:CDS 40.0%
TTGAGACCAGATCTGAGAAA+GGG + chr2_1:520059-520078 Msa0185920:CDS 40.0%
TAAAGTGCAACTCCAGGATT+CGG - chr2_1:520109-520128 None:intergenic 40.0%
!! CTGGAGTTGCACTTTAAGAT+GGG + chr2_1:520113-520132 Msa0185920:CDS 40.0%
ATGCACTCCTTAATCTATGG+AGG + chr2_1:520440-520459 Msa0185920:intron 40.0%
TGCACTCCTTAATCTATGGA+GGG + chr2_1:520441-520460 Msa0185920:intron 40.0%
! AAATGGAGCACCTTTCTCAT+TGG + chr2_1:520485-520504 Msa0185920:intron 40.0%
CATTACTTCTTAATTGCGCC+TGG + chr2_1:520567-520586 Msa0185920:intron 40.0%
ATCTCATTATCTGTACGTCC+AGG - chr2_1:520696-520715 None:intergenic 40.0%
GTTTGGATCTTGTCTCTTCA+GGG - chr2_1:520776-520795 None:intergenic 40.0%
GGCTTCATTTGTGAATGTGT+CGG - chr2_1:520826-520845 None:intergenic 40.0%
CCCCATATATCAAAACATGG+TGG - chr2_1:520927-520946 None:intergenic 40.0%
AATGGAGGAGACCACATAAT+AGG - chr2_1:521053-521072 None:intergenic 40.0%
TCGGCAAATATTGGAGTGAA+GGG - chr2_1:521148-521167 None:intergenic 40.0%
ACTGACTGATAAGGCTCAAA+CGG - chr2_1:521218-521237 None:intergenic 40.0%
TAAGGGGTTTCAAATGAGTG+GGG - chr2_1:521416-521435 None:intergenic 40.0%
CTAAGGGGTTTCAAATGAGT+GGG - chr2_1:521417-521436 None:intergenic 40.0%
ATGAGTAGTAGCGCTTCAAG+CGG + chr2_1:519792-519811 Msa0185920:CDS 45.0%
TCAGCTGAAGAAGGTGATCA+AGG + chr2_1:519858-519877 Msa0185920:CDS 45.0%
GGCGAAGGTAGTCTAAAGAA+AGG + chr2_1:519900-519919 Msa0185920:CDS 45.0%
! AAAAGCACGGAGAGGGAAAT+TGG + chr2_1:519967-519986 Msa0185920:CDS 45.0%
! TATACAGGACTTGCTCGTTG+TGG + chr2_1:520005-520024 Msa0185920:CDS 45.0%
! ATACAGGACTTGCTCGTTGT+GGG + chr2_1:520006-520025 Msa0185920:CDS 45.0%
GAAAAGCTGTCGTCTACGAT+GGG + chr2_1:520028-520047 Msa0185920:CDS 45.0%
ATTGCACCCTTTCTCAGATC+TGG - chr2_1:520068-520087 None:intergenic 45.0%
CCATCTTAAAGTGCAACTCC+AGG - chr2_1:520115-520134 None:intergenic 45.0%
! CCTGGAGTTGCACTTTAAGA+TGG + chr2_1:520112-520131 Msa0185920:CDS 45.0%
! ATAACAAGGGACAGTGGACT+AGG - chr2_1:520393-520412 None:intergenic 45.0%
AAGTGCATAACAAGGGACAG+TGG - chr2_1:520399-520418 None:intergenic 45.0%
CGTTTGGATCTTGTCTCTTC+AGG - chr2_1:520777-520796 None:intergenic 45.0%
TTCTGTTTCATCACTCTGGC+TGG - chr2_1:520847-520866 None:intergenic 45.0%
! CGCACTGATCAAATGTTGCT+GGG - chr2_1:521022-521041 None:intergenic 45.0%
! ACGCACTGATCAAATGTTGC+TGG - chr2_1:521023-521042 None:intergenic 45.0%
TGGCATGAATACCAACCAGA+AGG - chr2_1:521100-521119 None:intergenic 45.0%
GTCGGCAAATATTGGAGTGA+AGG - chr2_1:521149-521168 None:intergenic 45.0%
!! TGCCGACTCAACATTATAGC+TGG + chr2_1:521162-521181 Msa0185920:CDS 45.0%
! GCCGACTCAACATTATAGCT+GGG + chr2_1:521163-521182 Msa0185920:CDS 45.0%
CCCCAGCTATAATGTTGAGT+CGG - chr2_1:521167-521186 None:intergenic 45.0%
CCGACTCAACATTATAGCTG+GGG + chr2_1:521164-521183 Msa0185920:CDS 45.0%
GTACTAACGTCCGCTTCATT+GGG - chr2_1:521296-521315 None:intergenic 45.0%
TGTACTAACGTCCGCTTCAT+TGG - chr2_1:521297-521316 None:intergenic 45.0%
AAGCGGACGTTAGTACACAA+TGG + chr2_1:521300-521319 Msa0185920:CDS 45.0%
AGCGGACGTTAGTACACAAT+GGG + chr2_1:521301-521320 Msa0185920:CDS 45.0%
ATGAGTAGTAGCGCTTCAAG+CGG + chr2_1:519792-519811 Msa0185920:CDS 45.0%
TCAGCTGAAGAAGGTGATCA+AGG + chr2_1:519858-519877 Msa0185920:CDS 45.0%
GGCGAAGGTAGTCTAAAGAA+AGG + chr2_1:519900-519919 Msa0185920:CDS 45.0%
! AAAAGCACGGAGAGGGAAAT+TGG + chr2_1:519967-519986 Msa0185920:CDS 45.0%
! TATACAGGACTTGCTCGTTG+TGG + chr2_1:520005-520024 Msa0185920:CDS 45.0%
! ATACAGGACTTGCTCGTTGT+GGG + chr2_1:520006-520025 Msa0185920:CDS 45.0%
GAAAAGCTGTCGTCTACGAT+GGG + chr2_1:520028-520047 Msa0185920:CDS 45.0%
ATTGCACCCTTTCTCAGATC+TGG - chr2_1:520068-520087 None:intergenic 45.0%
CCATCTTAAAGTGCAACTCC+AGG - chr2_1:520115-520134 None:intergenic 45.0%
! CCTGGAGTTGCACTTTAAGA+TGG + chr2_1:520112-520131 Msa0185920:CDS 45.0%
! ATAACAAGGGACAGTGGACT+AGG - chr2_1:520393-520412 None:intergenic 45.0%
AAGTGCATAACAAGGGACAG+TGG - chr2_1:520399-520418 None:intergenic 45.0%
CGTTTGGATCTTGTCTCTTC+AGG - chr2_1:520777-520796 None:intergenic 45.0%
TTCTGTTTCATCACTCTGGC+TGG - chr2_1:520847-520866 None:intergenic 45.0%
! CGCACTGATCAAATGTTGCT+GGG - chr2_1:521022-521041 None:intergenic 45.0%
! ACGCACTGATCAAATGTTGC+TGG - chr2_1:521023-521042 None:intergenic 45.0%
TGGCATGAATACCAACCAGA+AGG - chr2_1:521100-521119 None:intergenic 45.0%
GTCGGCAAATATTGGAGTGA+AGG - chr2_1:521149-521168 None:intergenic 45.0%
!! TGCCGACTCAACATTATAGC+TGG + chr2_1:521162-521181 Msa0185920:CDS 45.0%
! GCCGACTCAACATTATAGCT+GGG + chr2_1:521163-521182 Msa0185920:CDS 45.0%
CCCCAGCTATAATGTTGAGT+CGG - chr2_1:521167-521186 None:intergenic 45.0%
CCGACTCAACATTATAGCTG+GGG + chr2_1:521164-521183 Msa0185920:CDS 45.0%
GTACTAACGTCCGCTTCATT+GGG - chr2_1:521296-521315 None:intergenic 45.0%
TGTACTAACGTCCGCTTCAT+TGG - chr2_1:521297-521316 None:intergenic 45.0%
AAGCGGACGTTAGTACACAA+TGG + chr2_1:521300-521319 Msa0185920:CDS 45.0%
AGCGGACGTTAGTACACAAT+GGG + chr2_1:521301-521320 Msa0185920:CDS 45.0%
TGAGTAGTAGCGCTTCAAGC+GGG + chr2_1:519793-519812 Msa0185920:CDS 50.0%
GATCGCAAAAGGCTAAAGCG+CGG + chr2_1:519822-519841 Msa0185920:CDS 50.0%
GGTGATCAAGGAGATAGCAC+TGG + chr2_1:519870-519889 Msa0185920:CDS 50.0%
! CAAGGAGATAGCACTGGAAG+AGG + chr2_1:519876-519895 Msa0185920:CDS 50.0%
GGAAAAGCTGTCGTCTACGA+TGG + chr2_1:520027-520046 Msa0185920:CDS 50.0%
TGAAGAAGAACGCCGAATCC+TGG + chr2_1:520094-520113 Msa0185920:CDS 50.0%
ATGGGCTCAAATTGCTGCAC+TGG + chr2_1:520142-520161 Msa0185920:CDS 50.0%
CTTGTCTCTTCAGGGTAGAC+TGG - chr2_1:520768-520787 None:intergenic 50.0%
!! ATATGGGGAAGTGGCTTGCT+TGG + chr2_1:520939-520958 Msa0185920:CDS 50.0%
TGATAAGGCTCAAACGGAGG+AGG - chr2_1:521212-521231 None:intergenic 50.0%
GACTGATAAGGCTCAAACGG+AGG - chr2_1:521215-521234 None:intergenic 50.0%
AGCAGACTGATCGTCTAGGT+CGG - chr2_1:521327-521346 None:intergenic 50.0%
AAGCAGCAGACTGATCGTCT+AGG - chr2_1:521331-521350 None:intergenic 50.0%
TGAGTAGTAGCGCTTCAAGC+GGG + chr2_1:519793-519812 Msa0185920:CDS 50.0%
GATCGCAAAAGGCTAAAGCG+CGG + chr2_1:519822-519841 Msa0185920:CDS 50.0%
GGTGATCAAGGAGATAGCAC+TGG + chr2_1:519870-519889 Msa0185920:CDS 50.0%
! CAAGGAGATAGCACTGGAAG+AGG + chr2_1:519876-519895 Msa0185920:CDS 50.0%
GGAAAAGCTGTCGTCTACGA+TGG + chr2_1:520027-520046 Msa0185920:CDS 50.0%
TGAAGAAGAACGCCGAATCC+TGG + chr2_1:520094-520113 Msa0185920:CDS 50.0%
ATGGGCTCAAATTGCTGCAC+TGG + chr2_1:520142-520161 Msa0185920:CDS 50.0%
CTTGTCTCTTCAGGGTAGAC+TGG - chr2_1:520768-520787 None:intergenic 50.0%
!! ATATGGGGAAGTGGCTTGCT+TGG + chr2_1:520939-520958 Msa0185920:CDS 50.0%
TGATAAGGCTCAAACGGAGG+AGG - chr2_1:521212-521231 None:intergenic 50.0%
GACTGATAAGGCTCAAACGG+AGG - chr2_1:521215-521234 None:intergenic 50.0%
AGCAGACTGATCGTCTAGGT+CGG - chr2_1:521327-521346 None:intergenic 50.0%
AAGCAGCAGACTGATCGTCT+AGG - chr2_1:521331-521350 None:intergenic 50.0%
GAGTAGTAGCGCTTCAAGCG+GGG + chr2_1:519794-519813 Msa0185920:CDS 55.0%
GCGGGGATGATGATCGCAAA+AGG + chr2_1:519811-519830 Msa0185920:CDS 55.0%
! GGAGATAGCACTGGAAGAGG+AGG + chr2_1:519879-519898 Msa0185920:CDS 55.0%
AACTACGGCGCCCAATGAAG+CGG + chr2_1:521283-521302 Msa0185920:CDS 55.0%
GAGTAGTAGCGCTTCAAGCG+GGG + chr2_1:519794-519813 Msa0185920:CDS 55.0%
GCGGGGATGATGATCGCAAA+AGG + chr2_1:519811-519830 Msa0185920:CDS 55.0%
! GGAGATAGCACTGGAAGAGG+AGG + chr2_1:519879-519898 Msa0185920:CDS 55.0%
AACTACGGCGCCCAATGAAG+CGG + chr2_1:521283-521302 Msa0185920:CDS 55.0%
! AGCACTGGAAGAGGAGGCGA+AGG + chr2_1:519885-519904 Msa0185920:CDS 60.0%
AGGTCAATGGACGTCGGCAG+AGG + chr2_1:519920-519939 Msa0185920:CDS 60.0%
GGAGGAGGCTGAATCAACGC+AGG - chr2_1:521197-521216 None:intergenic 60.0%
! AGCACTGGAAGAGGAGGCGA+AGG + chr2_1:519885-519904 Msa0185920:CDS 60.0%
AGGTCAATGGACGTCGGCAG+AGG + chr2_1:519920-519939 Msa0185920:CDS 60.0%
GGAGGAGGCTGAATCAACGC+AGG - chr2_1:521197-521216 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 519792 521436 519792 ID=Msa0185920;Name=Msa0185920
chr2_1 mRNA 519792 521436 519792 ID=Msa0185920-mRNA-1;Parent=Msa0185920;Name=Msa0185920-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|372
chr2_1 exon 519792 520163 519792 ID=Msa0185920-mRNA-1:exon:62;Parent=Msa0185920-mRNA-1
chr2_1 exon 520690 521436 520690 ID=Msa0185920-mRNA-1:exon:63;Parent=Msa0185920-mRNA-1
chr2_1 CDS 519792 520163 519792 ID=Msa0185920-mRNA-1:cds;Parent=Msa0185920-mRNA-1
chr2_1 CDS 520690 521436 520690 ID=Msa0185920-mRNA-1:cds;Parent=Msa0185920-mRNA-1
Gene Sequence

>Msa0185920

ATGAGTAGTAGCGCTTCAAGCGGGGATGATGATCGCAAAAGGCTAAAGCGCGGTCCGTCATCATTATCAGCTGAAGAAGGTGATCAAGGAGATAGCACTGGAAGAGGAGGCGAAGGTAGTCTAAAGAAAGGTCAATGGACGTCGGCAGAGGATGATATTTTGATAGCTCATGTTAAAAAGCACGGAGAGGGAAATTGGAGTGCAGTCCAAAAGTATACAGGACTTGCTCGTTGTGGGAAAAGCTGTCGTCTACGATGGGCAAACCATTTGAGACCAGATCTGAGAAAGGGTGCAATTACTGCTGAAGAAGAACGCCGAATCCTGGAGTTGCACTTTAAGATGGGAAATAAATGGGCTCAAATTGCTGCACTGTTGCCTGGACGTACAGATAATGAGATAAAGAACTTTTGGAACACAAGATATAAGAAACGAACACGAGCTAACTTACCAGTCTACCCTGAAGAGACAAGATCCAAACGACCATTGAATGAGAATCAAGAAAATGCCGACACATTCACAAATGAAGCCAGCCAGAGTGATGAAACAGAAAATTTGAGTATACCTGACGTGGAATTCAAAGATTACAAACTCCGCCAAGATATAATACCACCATGTTTTGATATATGGGGAAGTGGCTTGCTTGGACATCGTTCAGATTCAACATGCAATAATTTGTACGGTTGTAGCAGTAGTGCTGCTGTCCCAGCAACATTTGATCAGTGCGTAAAATATCCTATTATGTGGTCTCCTCCATTTAATCAGTATCAAGGATATAATAACCTTCTGGTTGGTATTCATGCCACGTCAAATATTTCTTCTTCTGAGCTCCCTTCACTCCAATATTTGCCGACTCAACATTATAGCTGGGGCTGCATGCCTGCGTTGATTCAGCCTCCTCCGTTTGAGCCTTATCAGTCAGTTCTAACTTCTCCACCTTTACTTGATTCATTGCAAGTGAAAACTGAAACTACGGCGCCCAATGAAGCGGACGTTAGTACACAATGGGCCGACCTAGACGATCAGTCTGCTGCTTCAATTCTGTCATCTGACTATAACACACAACATATGAACATGAACATGTGGTCAATTGATGGGCCCCACTCATTTGAAACCCCTTAG
Protein sequence

>Msa0185920

MSSSASSGDDDRKRLKRGPSSLSAEEGDQGDSTGRGGEGSLKKGQWTSAEDDILIAHVKKHGEGNWSAVQKYTGLARCGKSCRLRWANHLRPDLRKGAITAEEERRILELHFKMGNKWAQIAALLPGRTDNEIKNFWNTRYKKRTRANLPVYPEETRSKRPLNENQENADTFTNEASQSDETENLSIPDVEFKDYKLRQDIIPPCFDIWGSGLLGHRSDSTCNNLYGCSSSAAVPATFDQCVKYPIMWSPPFNQYQGYNNLLVGIHATSNISSSELPSLQYLPTQHYSWGCMPALIQPPPFEPYQSVLTSPPLLDSLQVKTETTAPNEADVSTQWADLDDQSAASILSSDYNTQHMNMNMWSIDGPHSFETP*