Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187840 | XP_013464888.1 | 86.098 | 410 | 41 | 3 | 1 | 395 | 1 | 409 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187840 | sp|F4JYC8|PTM_ARATH | 42.857 | 413 | 193 | 7 | 23 | 395 | 28 | 437 | 2.50e-81 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187840 | A0A072VBZ5 | 86.098 | 410 | 41 | 3 | 1 | 395 | 1 | 409 | 0.0 | 676 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0187840 | TR | DDT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187840 | MtrunA17_Chr2g0320731 | 86.098 | 410 | 41 | 3 | 1 | 395 | 1 | 409 | 0.0 | 676 |
| Msa0187840 | MtrunA17_Chr2g0320741 | 85.926 | 405 | 42 | 2 | 6 | 395 | 22 | 426 | 0.0 | 617 |
| Msa0187840 | MtrunA17_Chr4g0027391 | 53.086 | 405 | 146 | 4 | 35 | 395 | 38 | 442 | 9.65e-121 | 384 |
| Msa0187840 | MtrunA17_Chr4g0038871 | 40.467 | 257 | 116 | 6 | 156 | 395 | 489 | 725 | 2.72e-46 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187840 | AT5G22760.2 | 44.310 | 413 | 190 | 5 | 23 | 395 | 27 | 439 | 8.21e-99 | 318 |
| Msa0187840 | AT5G22760.1 | 44.310 | 413 | 190 | 5 | 23 | 395 | 27 | 439 | 3.04e-97 | 318 |
| Msa0187840 | AT5G35210.1 | 42.857 | 413 | 193 | 7 | 23 | 395 | 28 | 437 | 3.31e-82 | 275 |
| Msa0187840 | AT5G35210.2 | 42.857 | 413 | 193 | 7 | 23 | 395 | 28 | 437 | 3.92e-82 | 275 |
| Msa0187840 | AT5G12400.1 | 36.782 | 261 | 125 | 7 | 154 | 395 | 395 | 634 | 9.57e-38 | 146 |
| Msa0187840 | AT5G22760.3 | 43.713 | 167 | 75 | 3 | 244 | 395 | 2 | 164 | 8.52e-34 | 134 |
Find 82 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGTTAATGGATACATTA+AGG | 0.206270 | 2_1:-2607650 | Msa0187840:intron |
| GACAATCCTCCTGCTGAAAA+TGG | 0.248296 | 2_1:-2607448 | Msa0187840:CDS |
| ACAGCATCAAGCAACGTATT+TGG | 0.301592 | 2_1:+2608693 | None:intergenic |
| TTGGAGTTACCGCCGTCTTC+AGG | 0.306101 | 2_1:-2608849 | Msa0187840:CDS |
| ATGTTATGGACGATGATTCT+AGG | 0.319694 | 2_1:-2608935 | Msa0187840:CDS |
| CGTGGTCGACCTCTCCGTTT+TGG | 0.321778 | 2_1:+2609284 | None:intergenic |
| AATTCTTTGCGAGAATGTTT+TGG | 0.326104 | 2_1:-2607542 | Msa0187840:CDS |
| ATCCTGGCAATCGGTAGTTT+TGG | 0.329749 | 2_1:+2607399 | None:intergenic |
| ATTAGAATTGCCGCCGCCTT+TGG | 0.346275 | 2_1:-2608868 | Msa0187840:CDS |
| ATTACTAACTTCCTACTTGC+AGG | 0.351171 | 2_1:+2607571 | None:intergenic |
| GTTTCTTTATCCGTTTAGTT+TGG | 0.363228 | 2_1:-2608748 | Msa0187840:CDS |
| GATTCGAAGAAAGAATGAAT+TGG | 0.374606 | 2_1:-2609030 | Msa0187840:CDS |
| AAGAAGCCGATTGTATTGAT+TGG | 0.385934 | 2_1:-2609221 | Msa0187840:CDS |
| GCAGTTAATGGATACATTAA+GGG | 0.392194 | 2_1:-2607649 | Msa0187840:intron |
| TGAGATGCCGGTTGAATTGC+CGG | 0.396649 | 2_1:-2608895 | Msa0187840:CDS |
| GGGACCTTGCTTTGTTGTGA+TGG | 0.406109 | 2_1:-2607268 | Msa0187840:CDS |
| AGAGGAATCACGAGATGTTA+TGG | 0.406645 | 2_1:-2608949 | Msa0187840:CDS |
| CCGCCGTCTTCAGGAACTAT+TGG | 0.425427 | 2_1:-2608840 | Msa0187840:CDS |
| TCGGACAGCGTTGTTCGAAT+CGG | 0.448579 | 2_1:-2609176 | Msa0187840:CDS |
| ATACCGATGGCGCCACCACC+GGG | 0.452939 | 2_1:-2609326 | None:intergenic |
| GTCCCGCTGCTTATCATTCA+AGG | 0.454495 | 2_1:-2607243 | Msa0187840:CDS |
| TGTCGCCTCTGTGGCATGGA+TGG | 0.465410 | 2_1:-2607289 | Msa0187840:CDS |
| TGATTCTAGGGATTCATGTT+CGG | 0.471641 | 2_1:-2608922 | Msa0187840:CDS |
| AATGCCACCGGCAATTCAAC+CGG | 0.482469 | 2_1:+2608888 | None:intergenic |
| TGCCAAAACTACCGATTGCC+AGG | 0.482705 | 2_1:-2607401 | Msa0187840:CDS |
| CGATTGCATCTCGATGCCTT+AGG | 0.482999 | 2_1:-2608608 | Msa0187840:CDS |
| GATACCGATGGCGCCACCAC+CGG | 0.484635 | 2_1:-2609327 | None:intergenic |
| TTAGTTTGGATGATTTCGTC+GGG | 0.486533 | 2_1:-2608734 | Msa0187840:CDS |
| TATTATGCTTCTTCCTACTC+AGG | 0.497050 | 2_1:-2608585 | Msa0187840:intron |
| AGGTTCTTCATCCTGGCAAT+CGG | 0.497547 | 2_1:+2607390 | None:intergenic |
| TTCAGGAACTATTGGTGTGC+CGG | 0.500613 | 2_1:-2608832 | Msa0187840:CDS |
| ACGAAATCATCCAAACTAAA+CGG | 0.505403 | 2_1:+2608738 | None:intergenic |
| ACTTTGTAGGTTCTTCATCC+TGG | 0.512096 | 2_1:+2607383 | None:intergenic |
| GAGGACGAGGTTGACAAGAA+TGG | 0.523257 | 2_1:-2607319 | Msa0187840:CDS |
| TCTTGAACATCTTGCATCTG+AGG | 0.524195 | 2_1:-2608637 | Msa0187840:CDS |
| TTTAGTTTGGATGATTTCGT+CGG | 0.530079 | 2_1:-2608735 | Msa0187840:CDS |
| TGTTATGGACGATGATTCTA+GGG | 0.530361 | 2_1:-2608934 | Msa0187840:CDS |
| AGTCGTCCAATCAATACAAT+CGG | 0.532838 | 2_1:+2609215 | None:intergenic |
| AATCGGCTTCTTCAATTCAA+CGG | 0.540573 | 2_1:+2609232 | None:intergenic |
| CTTGAACATCTTGCATCTGA+GGG | 0.543535 | 2_1:-2608636 | Msa0187840:CDS |
| TTTGATGCTGTGAACTTACC+TGG | 0.548270 | 2_1:-2607349 | Msa0187840:CDS |
| GGCGGCAATTCTAATGCCAC+CGG | 0.549212 | 2_1:+2608876 | None:intergenic |
| GGTTCCGACGCAAGATCCCC+CGG | 0.549423 | 2_1:+2609308 | None:intergenic |
| TTCAGCAGGAGGATTGTCCT+CGG | 0.555733 | 2_1:+2607453 | None:intergenic |
| AGGAAGAAGCATAATACCTA+AGG | 0.558298 | 2_1:+2608592 | None:intergenic |
| GTCGCCTCTGTGGCATGGAT+GGG | 0.558996 | 2_1:-2607288 | Msa0187840:CDS |
| AAGTACGGAACATACTTCTC+CGG | 0.559098 | 2_1:+2608813 | None:intergenic |
| TACAGAGTAGAGTATGAAAA+CGG | 0.559177 | 2_1:-2609125 | Msa0187840:CDS |
| ATGCGTAAAGAGTCAGAGCT+CGG | 0.562795 | 2_1:-2607490 | Msa0187840:CDS |
| AATCATAAATTAACCTGAGT+AGG | 0.568473 | 2_1:+2608572 | None:intergenic |
| TTGCGTCGGAACCACCAAAA+CGG | 0.570245 | 2_1:-2609298 | Msa0187840:CDS |
| CCATATACCGAAAACAAGTA+CGG | 0.572436 | 2_1:+2608798 | None:intergenic |
| TGCGTAAAGAGTCAGAGCTC+GGG | 0.572586 | 2_1:-2607489 | Msa0187840:CDS |
| GGCGGTAACTCCAAAGGCGG+CGG | 0.576075 | 2_1:+2608858 | None:intergenic |
| ATTACTCATTGCCTGCAAGT+AGG | 0.576799 | 2_1:-2607582 | Msa0187840:CDS |
| CACCTTGAATGATAAGCAGC+GGG | 0.578435 | 2_1:+2607241 | None:intergenic |
| ATGTTCGGATGCTGAGATGC+CGG | 0.583176 | 2_1:-2608907 | Msa0187840:CDS |
| ATTGAATGCGGAAGATCAAG+AGG | 0.592826 | 2_1:-2608967 | Msa0187840:CDS |
| ACCTGGTAATTCTGAGGACG+AGG | 0.593787 | 2_1:-2607332 | Msa0187840:CDS |
| TGAATGTCGCCTCTGTGGCA+TGG | 0.601735 | 2_1:-2607293 | Msa0187840:CDS |
| ACCGATGGCGCCACCACCGG+GGG | 0.602951 | 2_1:-2609324 | None:intergenic |
| CAGTTAATGGATACATTAAG+GGG | 0.611318 | 2_1:-2607648 | Msa0187840:CDS |
| GAAGACGGCGGTAACTCCAA+AGG | 0.615168 | 2_1:+2608852 | None:intergenic |
| ACCTCGTCCTCAGAATTACC+AGG | 0.623027 | 2_1:+2607331 | None:intergenic |
| ATTAAGGGGTCTGAGTGGAA+AGG | 0.624469 | 2_1:-2607634 | Msa0187840:CDS |
| ACATCCATCACAACAAAGCA+AGG | 0.634622 | 2_1:+2607264 | None:intergenic |
| CAAAACGGAGAGGTCGACCA+CGG | 0.642565 | 2_1:-2609283 | Msa0187840:CDS |
| GAACTTACCTGGTAATTCTG+AGG | 0.643510 | 2_1:-2607338 | Msa0187840:CDS |
| TACCGATGGCGCCACCACCG+GGG | 0.647579 | 2_1:-2609325 | None:intergenic |
| CGGGAAGAATTACGATGCCG+AGG | 0.652952 | 2_1:-2607470 | Msa0187840:CDS |
| GATACATTAAGGGGTCTGAG+TGG | 0.669370 | 2_1:-2607639 | Msa0187840:CDS |
| ACACCAATAGTTCCTGAAGA+CGG | 0.670443 | 2_1:+2608837 | None:intergenic |
| GACGGCGGTAACTCCAAAGG+CGG | 0.674003 | 2_1:+2608855 | None:intergenic |
| ACACCTTGAATGATAAGCAG+CGG | 0.681733 | 2_1:+2607240 | None:intergenic |
| GGAGATGAATGTCGCCTCTG+TGG | 0.692374 | 2_1:-2607298 | Msa0187840:CDS |
| AGAATCTAGAGAATTGAATG+CGG | 0.696860 | 2_1:-2608979 | Msa0187840:CDS |
| TAGTTTGGATGATTTCGTCG+GGG | 0.718879 | 2_1:-2608733 | Msa0187840:CDS |
| AGGTCCCATCCATGCCACAG+AGG | 0.721119 | 2_1:+2607284 | None:intergenic |
| TCGGAACCACCAAAACGGAG+AGG | 0.732835 | 2_1:-2609293 | Msa0187840:CDS |
| CCAATAGTTCCTGAAGACGG+CGG | 0.742850 | 2_1:+2608840 | None:intergenic |
| GATGCCGGTTGAATTGCCGG+TGG | 0.761237 | 2_1:-2608892 | Msa0187840:CDS |
| TATTCGTAGAAGTCTCATCG+AGG | 0.769196 | 2_1:-2609075 | Msa0187840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATAGAAATATTCTCT+TGG | - | chr2_1:2608627-2608646 | Msa0187840:CDS | 15.0% |
| !! | TAAAATAGAAATATTCTCTT+GGG | - | chr2_1:2608628-2608647 | Msa0187840:CDS | 15.0% |
| !!! | ATTTTAATATGTATTATTCC+AGG | - | chr2_1:2608804-2608823 | Msa0187840:CDS | 15.0% |
| !! | TTAAAATAGAAATATTCTCT+TGG | - | chr2_1:2608627-2608646 | Msa0187840:CDS | 15.0% |
| !! | TAAAATAGAAATATTCTCTT+GGG | - | chr2_1:2608628-2608647 | Msa0187840:CDS | 15.0% |
| !!! | ATTTTAATATGTATTATTCC+AGG | - | chr2_1:2608804-2608823 | Msa0187840:CDS | 15.0% |
| !!! | AAAGTTTTGAGTTACAAAAT+CGG | - | chr2_1:2607384-2607403 | Msa0187840:CDS | 20.0% |
| !!! | TCATTTTATGAGGTTATTAT+TGG | - | chr2_1:2608562-2608581 | Msa0187840:intron | 20.0% |
| !!! | CATTTTATGAGGTTATTATT+GGG | - | chr2_1:2608563-2608582 | Msa0187840:intron | 20.0% |
| !!! | TCTATTTTAATTTCCTTAAC+AGG | + | chr2_1:2608617-2608636 | None:intergenic | 20.0% |
| !! | AAATATTCGATTAAGAAAAC+AGG | + | chr2_1:2608866-2608885 | None:intergenic | 20.0% |
| !!! | AATTTTGAAACAAACTTTGT+AGG | + | chr2_1:2609169-2609188 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGAGTTACAAAAT+CGG | - | chr2_1:2607384-2607403 | Msa0187840:CDS | 20.0% |
| !!! | TCATTTTATGAGGTTATTAT+TGG | - | chr2_1:2608562-2608581 | Msa0187840:intron | 20.0% |
| !!! | CATTTTATGAGGTTATTATT+GGG | - | chr2_1:2608563-2608582 | Msa0187840:intron | 20.0% |
| !!! | TCTATTTTAATTTCCTTAAC+AGG | + | chr2_1:2608617-2608636 | None:intergenic | 20.0% |
| !! | AAATATTCGATTAAGAAAAC+AGG | + | chr2_1:2608866-2608885 | None:intergenic | 20.0% |
| !!! | AATTTTGAAACAAACTTTGT+AGG | + | chr2_1:2609169-2609188 | None:intergenic | 20.0% |
| ! | AATCATAAATTAACCTGAGT+AGG | + | chr2_1:2607967-2607986 | None:intergenic | 25.0% |
| !!! | TTTTTGACTAGTTTTTACAG+AGG | - | chr2_1:2608453-2608472 | Msa0187840:intron | 25.0% |
| ! | ATCGAATATTTAGCAGTTAA+TGG | - | chr2_1:2608875-2608894 | Msa0187840:CDS | 25.0% |
| ! | AATCATAAATTAACCTGAGT+AGG | + | chr2_1:2607967-2607986 | None:intergenic | 25.0% |
| !!! | TTTTTGACTAGTTTTTACAG+AGG | - | chr2_1:2608453-2608472 | Msa0187840:intron | 25.0% |
| ! | ATCGAATATTTAGCAGTTAA+TGG | - | chr2_1:2608875-2608894 | Msa0187840:CDS | 25.0% |
| ! | ACAGTTTCTTCTTTTCTTCT+TGG | + | chr2_1:2607282-2607301 | None:intergenic | 30.0% |
| ! | ACTCATTTCGAAAGAGTTTT+CGG | - | chr2_1:2607341-2607360 | Msa0187840:CDS | 30.0% |
| TACAGAGTAGAGTATGAAAA+CGG | - | chr2_1:2607411-2607430 | Msa0187840:CDS | 30.0% | |
| GATTCGAAGAAAGAATGAAT+TGG | - | chr2_1:2607506-2607525 | Msa0187840:CDS | 30.0% | |
| AGAATCTAGAGAATTGAATG+CGG | - | chr2_1:2607557-2607576 | Msa0187840:CDS | 30.0% | |
| GTTTCTTTATCCGTTTAGTT+TGG | - | chr2_1:2607788-2607807 | Msa0187840:intron | 30.0% | |
| ACGAAATCATCCAAACTAAA+CGG | + | chr2_1:2607801-2607820 | None:intergenic | 30.0% | |
| !! | TTTAGTTTGGATGATTTCGT+CGG | - | chr2_1:2607801-2607820 | Msa0187840:intron | 30.0% |
| !! | CTACTGTTTCTAATGGAATA+GGG | + | chr2_1:2608027-2608046 | None:intergenic | 30.0% |
| !! | ACTACTGTTTCTAATGGAAT+AGG | + | chr2_1:2608028-2608047 | None:intergenic | 30.0% |
| TACAGAATCTACAGTAACTA+GGG | + | chr2_1:2608180-2608199 | None:intergenic | 30.0% | |
| !!! | CTCATCTTTCATGCTATTTT+CGG | + | chr2_1:2608216-2608235 | None:intergenic | 30.0% |
| AAGTTCTGCAAAAGTAGTTA+TGG | - | chr2_1:2608246-2608265 | Msa0187840:intron | 30.0% | |
| TTCATAGATTACAGGATCAT+AGG | + | chr2_1:2608310-2608329 | None:intergenic | 30.0% | |
| CATACAGTTTCATAGATTAC+AGG | + | chr2_1:2608318-2608337 | None:intergenic | 30.0% | |
| ATTAGTCGACCTAATATAAC+TGG | - | chr2_1:2608376-2608395 | Msa0187840:intron | 30.0% | |
| TTAGTCGACCTAATATAACT+GGG | - | chr2_1:2608377-2608396 | Msa0187840:intron | 30.0% | |
| TTCCTCTATAGCAAATTCTA+AGG | + | chr2_1:2608407-2608426 | None:intergenic | 30.0% | |
| !!! | CTGGTGTTATTCATTTTATG+AGG | - | chr2_1:2608552-2608571 | Msa0187840:intron | 30.0% |
| AGAAATATTCTCTTGGGAAA+TGG | - | chr2_1:2608634-2608653 | Msa0187840:CDS | 30.0% | |
| ! | AGCAGTTAATGGATACATTA+AGG | - | chr2_1:2608886-2608905 | Msa0187840:CDS | 30.0% |
| ! | GCAGTTAATGGATACATTAA+GGG | - | chr2_1:2608887-2608906 | Msa0187840:CDS | 30.0% |
| ! | CAGTTAATGGATACATTAAG+GGG | - | chr2_1:2608888-2608907 | Msa0187840:CDS | 30.0% |
| ! | TTCTACGACGAGATTTTTAA+CGG | - | chr2_1:2608926-2608945 | Msa0187840:CDS | 30.0% |
| ! | AATTCTTTGCGAGAATGTTT+TGG | - | chr2_1:2608994-2609013 | Msa0187840:CDS | 30.0% |
| ! | ACAGTTTCTTCTTTTCTTCT+TGG | + | chr2_1:2607282-2607301 | None:intergenic | 30.0% |
| ! | ACTCATTTCGAAAGAGTTTT+CGG | - | chr2_1:2607341-2607360 | Msa0187840:CDS | 30.0% |
| TACAGAGTAGAGTATGAAAA+CGG | - | chr2_1:2607411-2607430 | Msa0187840:CDS | 30.0% | |
| GATTCGAAGAAAGAATGAAT+TGG | - | chr2_1:2607506-2607525 | Msa0187840:CDS | 30.0% | |
| AGAATCTAGAGAATTGAATG+CGG | - | chr2_1:2607557-2607576 | Msa0187840:CDS | 30.0% | |
| GTTTCTTTATCCGTTTAGTT+TGG | - | chr2_1:2607788-2607807 | Msa0187840:intron | 30.0% | |
| ACGAAATCATCCAAACTAAA+CGG | + | chr2_1:2607801-2607820 | None:intergenic | 30.0% | |
| !! | TTTAGTTTGGATGATTTCGT+CGG | - | chr2_1:2607801-2607820 | Msa0187840:intron | 30.0% |
| !! | CTACTGTTTCTAATGGAATA+GGG | + | chr2_1:2608027-2608046 | None:intergenic | 30.0% |
| !! | ACTACTGTTTCTAATGGAAT+AGG | + | chr2_1:2608028-2608047 | None:intergenic | 30.0% |
| TACAGAATCTACAGTAACTA+GGG | + | chr2_1:2608180-2608199 | None:intergenic | 30.0% | |
| !!! | CTCATCTTTCATGCTATTTT+CGG | + | chr2_1:2608216-2608235 | None:intergenic | 30.0% |
| AAGTTCTGCAAAAGTAGTTA+TGG | - | chr2_1:2608246-2608265 | Msa0187840:intron | 30.0% | |
| TTCATAGATTACAGGATCAT+AGG | + | chr2_1:2608310-2608329 | None:intergenic | 30.0% | |
| CATACAGTTTCATAGATTAC+AGG | + | chr2_1:2608318-2608337 | None:intergenic | 30.0% | |
| ATTAGTCGACCTAATATAAC+TGG | - | chr2_1:2608376-2608395 | Msa0187840:intron | 30.0% | |
| TTAGTCGACCTAATATAACT+GGG | - | chr2_1:2608377-2608396 | Msa0187840:intron | 30.0% | |
| TTCCTCTATAGCAAATTCTA+AGG | + | chr2_1:2608407-2608426 | None:intergenic | 30.0% | |
| !!! | CTGGTGTTATTCATTTTATG+AGG | - | chr2_1:2608552-2608571 | Msa0187840:intron | 30.0% |
| AGAAATATTCTCTTGGGAAA+TGG | - | chr2_1:2608634-2608653 | Msa0187840:CDS | 30.0% | |
| ! | AGCAGTTAATGGATACATTA+AGG | - | chr2_1:2608886-2608905 | Msa0187840:CDS | 30.0% |
| ! | GCAGTTAATGGATACATTAA+GGG | - | chr2_1:2608887-2608906 | Msa0187840:CDS | 30.0% |
| ! | CAGTTAATGGATACATTAAG+GGG | - | chr2_1:2608888-2608907 | Msa0187840:CDS | 30.0% |
| ! | TTCTACGACGAGATTTTTAA+CGG | - | chr2_1:2608926-2608945 | Msa0187840:CDS | 30.0% |
| ! | AATTCTTTGCGAGAATGTTT+TGG | - | chr2_1:2608994-2609013 | Msa0187840:CDS | 30.0% |
| ! | AATCGGCTTCTTCAATTCAA+CGG | + | chr2_1:2607307-2607326 | None:intergenic | 35.0% |
| ! | AAGAAGCCGATTGTATTGAT+TGG | - | chr2_1:2607315-2607334 | Msa0187840:CDS | 35.0% |
| AGTCGTCCAATCAATACAAT+CGG | + | chr2_1:2607324-2607343 | None:intergenic | 35.0% | |
| ! | GTATGAAAACGGTGATTTTG+AGG | - | chr2_1:2607422-2607441 | Msa0187840:CDS | 35.0% |
| !! | AAACGGTGATTTTGAGGATT+TGG | - | chr2_1:2607428-2607447 | Msa0187840:CDS | 35.0% |
| ATGTTATGGACGATGATTCT+AGG | - | chr2_1:2607601-2607620 | Msa0187840:CDS | 35.0% | |
| TGTTATGGACGATGATTCTA+GGG | - | chr2_1:2607602-2607621 | Msa0187840:CDS | 35.0% | |
| ! | TGATTCTAGGGATTCATGTT+CGG | - | chr2_1:2607614-2607633 | Msa0187840:CDS | 35.0% |
| !! | GTATGTTCCGTACTTGTTTT+CGG | - | chr2_1:2607731-2607750 | Msa0187840:intron | 35.0% |
| CCATATACCGAAAACAAGTA+CGG | + | chr2_1:2607741-2607760 | None:intergenic | 35.0% | |
| ! | TTAGTTTGGATGATTTCGTC+GGG | - | chr2_1:2607802-2607821 | Msa0187840:intron | 35.0% |
| ! | AGGAAGAAGCATAATACCTA+AGG | + | chr2_1:2607947-2607966 | None:intergenic | 35.0% |
| TATTATGCTTCTTCCTACTC+AGG | - | chr2_1:2607951-2607970 | Msa0187840:intron | 35.0% | |
| !! | GGTTACACTACTGTTTCTAA+TGG | + | chr2_1:2608034-2608053 | None:intergenic | 35.0% |
| AGTGTAACCTGATATAGCAT+TGG | - | chr2_1:2608045-2608064 | Msa0187840:intron | 35.0% | |
| GTGTAACCTGATATAGCATT+GGG | - | chr2_1:2608046-2608065 | Msa0187840:intron | 35.0% | |
| ! | ATTTTGCCCAATGCTATATC+AGG | + | chr2_1:2608055-2608074 | None:intergenic | 35.0% |
| ATGTTGTCAATTGCAGATTG+CGG | + | chr2_1:2608147-2608166 | None:intergenic | 35.0% | |
| CTACAGAATCTACAGTAACT+AGG | + | chr2_1:2608181-2608200 | None:intergenic | 35.0% | |
| ! | TACTTTTGCAGAACTTCCTT+CGG | + | chr2_1:2608242-2608261 | None:intergenic | 35.0% |
| !! | CACCTTAGAATTTGCTATAG+AGG | - | chr2_1:2608402-2608421 | Msa0187840:intron | 35.0% |
| ! | TTTCCTTAACAGGTGTCATA+AGG | + | chr2_1:2608607-2608626 | None:intergenic | 35.0% |
| ATTACTAACTTCCTACTTGC+AGG | + | chr2_1:2608968-2608987 | None:intergenic | 35.0% | |
| ! | AATCGGCTTCTTCAATTCAA+CGG | + | chr2_1:2607307-2607326 | None:intergenic | 35.0% |
| ! | AAGAAGCCGATTGTATTGAT+TGG | - | chr2_1:2607315-2607334 | Msa0187840:CDS | 35.0% |
| AGTCGTCCAATCAATACAAT+CGG | + | chr2_1:2607324-2607343 | None:intergenic | 35.0% | |
| ! | GTATGAAAACGGTGATTTTG+AGG | - | chr2_1:2607422-2607441 | Msa0187840:CDS | 35.0% |
| !! | AAACGGTGATTTTGAGGATT+TGG | - | chr2_1:2607428-2607447 | Msa0187840:CDS | 35.0% |
| ATGTTATGGACGATGATTCT+AGG | - | chr2_1:2607601-2607620 | Msa0187840:CDS | 35.0% | |
| TGTTATGGACGATGATTCTA+GGG | - | chr2_1:2607602-2607621 | Msa0187840:CDS | 35.0% | |
| ! | TGATTCTAGGGATTCATGTT+CGG | - | chr2_1:2607614-2607633 | Msa0187840:CDS | 35.0% |
| !! | GTATGTTCCGTACTTGTTTT+CGG | - | chr2_1:2607731-2607750 | Msa0187840:intron | 35.0% |
| CCATATACCGAAAACAAGTA+CGG | + | chr2_1:2607741-2607760 | None:intergenic | 35.0% | |
| ! | TTAGTTTGGATGATTTCGTC+GGG | - | chr2_1:2607802-2607821 | Msa0187840:intron | 35.0% |
| ! | AGGAAGAAGCATAATACCTA+AGG | + | chr2_1:2607947-2607966 | None:intergenic | 35.0% |
| TATTATGCTTCTTCCTACTC+AGG | - | chr2_1:2607951-2607970 | Msa0187840:intron | 35.0% | |
| !! | GGTTACACTACTGTTTCTAA+TGG | + | chr2_1:2608034-2608053 | None:intergenic | 35.0% |
| AGTGTAACCTGATATAGCAT+TGG | - | chr2_1:2608045-2608064 | Msa0187840:intron | 35.0% | |
| GTGTAACCTGATATAGCATT+GGG | - | chr2_1:2608046-2608065 | Msa0187840:intron | 35.0% | |
| ! | ATTTTGCCCAATGCTATATC+AGG | + | chr2_1:2608055-2608074 | None:intergenic | 35.0% |
| ATGTTGTCAATTGCAGATTG+CGG | + | chr2_1:2608147-2608166 | None:intergenic | 35.0% | |
| CTACAGAATCTACAGTAACT+AGG | + | chr2_1:2608181-2608200 | None:intergenic | 35.0% | |
| ! | TACTTTTGCAGAACTTCCTT+CGG | + | chr2_1:2608242-2608261 | None:intergenic | 35.0% |
| !! | CACCTTAGAATTTGCTATAG+AGG | - | chr2_1:2608402-2608421 | Msa0187840:intron | 35.0% |
| ! | TTTCCTTAACAGGTGTCATA+AGG | + | chr2_1:2608607-2608626 | None:intergenic | 35.0% |
| ATTACTAACTTCCTACTTGC+AGG | + | chr2_1:2608968-2608987 | None:intergenic | 35.0% | |
| ! | TCTTTTCTTCTTGGTTTCCG+TGG | + | chr2_1:2607273-2607292 | None:intergenic | 40.0% |
| TATTCGTAGAAGTCTCATCG+AGG | - | chr2_1:2607461-2607480 | Msa0187840:CDS | 40.0% | |
| ATTGAATGCGGAAGATCAAG+AGG | - | chr2_1:2607569-2607588 | Msa0187840:CDS | 40.0% | |
| AGAGGAATCACGAGATGTTA+TGG | - | chr2_1:2607587-2607606 | Msa0187840:CDS | 40.0% | |
| ACACCAATAGTTCCTGAAGA+CGG | + | chr2_1:2607702-2607721 | None:intergenic | 40.0% | |
| AAGTACGGAACATACTTCTC+CGG | + | chr2_1:2607726-2607745 | None:intergenic | 40.0% | |
| !! | CCGTACTTGTTTTCGGTATA+TGG | - | chr2_1:2607738-2607757 | Msa0187840:intron | 40.0% |
| TAGTTTGGATGATTTCGTCG+GGG | - | chr2_1:2607803-2607822 | Msa0187840:intron | 40.0% | |
| ACAGCATCAAGCAACGTATT+TGG | + | chr2_1:2607846-2607865 | None:intergenic | 40.0% | |
| TCTTGAACATCTTGCATCTG+AGG | - | chr2_1:2607899-2607918 | Msa0187840:intron | 40.0% | |
| CTTGAACATCTTGCATCTGA+GGG | - | chr2_1:2607900-2607919 | Msa0187840:intron | 40.0% | |
| CATGAAAGATGAGATTCCGA+AGG | - | chr2_1:2608223-2608242 | Msa0187840:intron | 40.0% | |
| !!! | TGGACAGTTGTCACTTTTAG+TGG | - | chr2_1:2608266-2608285 | Msa0187840:intron | 40.0% |
| AAGGTGTGCCCAGTTATATT+AGG | + | chr2_1:2608388-2608407 | None:intergenic | 40.0% | |
| !! | CTAGTTTTTACAGAGGAGAG+AGG | - | chr2_1:2608460-2608479 | Msa0187840:intron | 40.0% |
| TGTCCTTATGACACCTGTTA+AGG | - | chr2_1:2608601-2608620 | Msa0187840:CDS | 40.0% | |
| ATTATTCCAGGTGCAGTGAA+TGG | - | chr2_1:2608816-2608835 | Msa0187840:CDS | 40.0% | |
| GCTTGCTTGATACATTGACA+TGG | - | chr2_1:2608840-2608859 | Msa0187840:CDS | 40.0% | |
| ATTACTCATTGCCTGCAAGT+AGG | - | chr2_1:2608954-2608973 | Msa0187840:CDS | 40.0% | |
| !! | CTTTTAGGTCCATTTTCAGC+AGG | + | chr2_1:2609100-2609119 | None:intergenic | 40.0% |
| !! | TATCGTCGATGGACTCTTTT+AGG | + | chr2_1:2609115-2609134 | None:intergenic | 40.0% |
| !!! | TAGTTTTGGCATATCGTCGA+TGG | + | chr2_1:2609126-2609145 | None:intergenic | 40.0% |
| ACTTTGTAGGTTCTTCATCC+TGG | + | chr2_1:2609156-2609175 | None:intergenic | 40.0% | |
| TTTGATGCTGTGAACTTACC+TGG | - | chr2_1:2609187-2609206 | Msa0187840:CDS | 40.0% | |
| GAACTTACCTGGTAATTCTG+AGG | - | chr2_1:2609198-2609217 | Msa0187840:CDS | 40.0% | |
| ACATCCATCACAACAAAGCA+AGG | + | chr2_1:2609275-2609294 | None:intergenic | 40.0% | |
| ACACCTTGAATGATAAGCAG+CGG | + | chr2_1:2609299-2609318 | None:intergenic | 40.0% | |
| ! | TCTTTTCTTCTTGGTTTCCG+TGG | + | chr2_1:2607273-2607292 | None:intergenic | 40.0% |
| TATTCGTAGAAGTCTCATCG+AGG | - | chr2_1:2607461-2607480 | Msa0187840:CDS | 40.0% | |
| ATTGAATGCGGAAGATCAAG+AGG | - | chr2_1:2607569-2607588 | Msa0187840:CDS | 40.0% | |
| AGAGGAATCACGAGATGTTA+TGG | - | chr2_1:2607587-2607606 | Msa0187840:CDS | 40.0% | |
| ACACCAATAGTTCCTGAAGA+CGG | + | chr2_1:2607702-2607721 | None:intergenic | 40.0% | |
| AAGTACGGAACATACTTCTC+CGG | + | chr2_1:2607726-2607745 | None:intergenic | 40.0% | |
| !! | CCGTACTTGTTTTCGGTATA+TGG | - | chr2_1:2607738-2607757 | Msa0187840:intron | 40.0% |
| TAGTTTGGATGATTTCGTCG+GGG | - | chr2_1:2607803-2607822 | Msa0187840:intron | 40.0% | |
| ACAGCATCAAGCAACGTATT+TGG | + | chr2_1:2607846-2607865 | None:intergenic | 40.0% | |
| TCTTGAACATCTTGCATCTG+AGG | - | chr2_1:2607899-2607918 | Msa0187840:intron | 40.0% | |
| CTTGAACATCTTGCATCTGA+GGG | - | chr2_1:2607900-2607919 | Msa0187840:intron | 40.0% | |
| CATGAAAGATGAGATTCCGA+AGG | - | chr2_1:2608223-2608242 | Msa0187840:intron | 40.0% | |
| !!! | TGGACAGTTGTCACTTTTAG+TGG | - | chr2_1:2608266-2608285 | Msa0187840:intron | 40.0% |
| AAGGTGTGCCCAGTTATATT+AGG | + | chr2_1:2608388-2608407 | None:intergenic | 40.0% | |
| !! | CTAGTTTTTACAGAGGAGAG+AGG | - | chr2_1:2608460-2608479 | Msa0187840:intron | 40.0% |
| TGTCCTTATGACACCTGTTA+AGG | - | chr2_1:2608601-2608620 | Msa0187840:CDS | 40.0% | |
| ATTATTCCAGGTGCAGTGAA+TGG | - | chr2_1:2608816-2608835 | Msa0187840:CDS | 40.0% | |
| GCTTGCTTGATACATTGACA+TGG | - | chr2_1:2608840-2608859 | Msa0187840:CDS | 40.0% | |
| ATTACTCATTGCCTGCAAGT+AGG | - | chr2_1:2608954-2608973 | Msa0187840:CDS | 40.0% | |
| !! | CTTTTAGGTCCATTTTCAGC+AGG | + | chr2_1:2609100-2609119 | None:intergenic | 40.0% |
| !! | TATCGTCGATGGACTCTTTT+AGG | + | chr2_1:2609115-2609134 | None:intergenic | 40.0% |
| !!! | TAGTTTTGGCATATCGTCGA+TGG | + | chr2_1:2609126-2609145 | None:intergenic | 40.0% |
| ACTTTGTAGGTTCTTCATCC+TGG | + | chr2_1:2609156-2609175 | None:intergenic | 40.0% | |
| TTTGATGCTGTGAACTTACC+TGG | - | chr2_1:2609187-2609206 | Msa0187840:CDS | 40.0% | |
| GAACTTACCTGGTAATTCTG+AGG | - | chr2_1:2609198-2609217 | Msa0187840:CDS | 40.0% | |
| ACATCCATCACAACAAAGCA+AGG | + | chr2_1:2609275-2609294 | None:intergenic | 40.0% | |
| ACACCTTGAATGATAAGCAG+CGG | + | chr2_1:2609299-2609318 | None:intergenic | 40.0% | |
| TTCAGGAACTATTGGTGTGC+CGG | - | chr2_1:2607704-2607723 | Msa0187840:intron | 45.0% | |
| TAACACCAGTGCATGTGTGT+TGG | + | chr2_1:2608541-2608560 | None:intergenic | 45.0% | |
| ! | GTTTTCTCAACAAGTGCCCA+AGG | - | chr2_1:2608721-2608740 | Msa0187840:CDS | 45.0% |
| GTCTTGCTAACAAGTGCCTT+GGG | + | chr2_1:2608740-2608759 | None:intergenic | 45.0% | |
| AGTCTTGCTAACAAGTGCCT+TGG | + | chr2_1:2608741-2608760 | None:intergenic | 45.0% | |
| GATACATTAAGGGGTCTGAG+TGG | - | chr2_1:2608897-2608916 | Msa0187840:CDS | 45.0% | |
| ATTAAGGGGTCTGAGTGGAA+AGG | - | chr2_1:2608902-2608921 | Msa0187840:CDS | 45.0% | |
| !!! | CGAGAATGTTTTGGAGTCTG+AGG | - | chr2_1:2609003-2609022 | Msa0187840:CDS | 45.0% |
| ATGCGTAAAGAGTCAGAGCT+CGG | - | chr2_1:2609046-2609065 | Msa0187840:CDS | 45.0% | |
| GACAATCCTCCTGCTGAAAA+TGG | - | chr2_1:2609088-2609107 | Msa0187840:CDS | 45.0% | |
| ! | TTAGGTCCATTTTCAGCAGG+AGG | + | chr2_1:2609097-2609116 | None:intergenic | 45.0% |
| ! | ATCCTGGCAATCGGTAGTTT+TGG | + | chr2_1:2609140-2609159 | None:intergenic | 45.0% |
| AGGTTCTTCATCCTGGCAAT+CGG | + | chr2_1:2609149-2609168 | None:intergenic | 45.0% | |
| CACCTTGAATGATAAGCAGC+GGG | + | chr2_1:2609298-2609317 | None:intergenic | 45.0% | |
| TTCAGGAACTATTGGTGTGC+CGG | - | chr2_1:2607704-2607723 | Msa0187840:intron | 45.0% | |
| TAACACCAGTGCATGTGTGT+TGG | + | chr2_1:2608541-2608560 | None:intergenic | 45.0% | |
| ! | GTTTTCTCAACAAGTGCCCA+AGG | - | chr2_1:2608721-2608740 | Msa0187840:CDS | 45.0% |
| GTCTTGCTAACAAGTGCCTT+GGG | + | chr2_1:2608740-2608759 | None:intergenic | 45.0% | |
| AGTCTTGCTAACAAGTGCCT+TGG | + | chr2_1:2608741-2608760 | None:intergenic | 45.0% | |
| GATACATTAAGGGGTCTGAG+TGG | - | chr2_1:2608897-2608916 | Msa0187840:CDS | 45.0% | |
| ATTAAGGGGTCTGAGTGGAA+AGG | - | chr2_1:2608902-2608921 | Msa0187840:CDS | 45.0% | |
| !!! | CGAGAATGTTTTGGAGTCTG+AGG | - | chr2_1:2609003-2609022 | Msa0187840:CDS | 45.0% |
| ATGCGTAAAGAGTCAGAGCT+CGG | - | chr2_1:2609046-2609065 | Msa0187840:CDS | 45.0% | |
| GACAATCCTCCTGCTGAAAA+TGG | - | chr2_1:2609088-2609107 | Msa0187840:CDS | 45.0% | |
| ! | TTAGGTCCATTTTCAGCAGG+AGG | + | chr2_1:2609097-2609116 | None:intergenic | 45.0% |
| ! | ATCCTGGCAATCGGTAGTTT+TGG | + | chr2_1:2609140-2609159 | None:intergenic | 45.0% |
| AGGTTCTTCATCCTGGCAAT+CGG | + | chr2_1:2609149-2609168 | None:intergenic | 45.0% | |
| CACCTTGAATGATAAGCAGC+GGG | + | chr2_1:2609298-2609317 | None:intergenic | 45.0% | |
| TTGCGTCGGAACCACCAAAA+CGG | - | chr2_1:2607238-2607257 | Msa0187840:CDS | 50.0% | |
| TCGGACAGCGTTGTTCGAAT+CGG | - | chr2_1:2607360-2607379 | Msa0187840:CDS | 50.0% | |
| ATGTTCGGATGCTGAGATGC+CGG | - | chr2_1:2607629-2607648 | Msa0187840:CDS | 50.0% | |
| ! | TGAGATGCCGGTTGAATTGC+CGG | - | chr2_1:2607641-2607660 | Msa0187840:CDS | 50.0% |
| AATGCCACCGGCAATTCAAC+CGG | + | chr2_1:2607651-2607670 | None:intergenic | 50.0% | |
| ATTAGAATTGCCGCCGCCTT+TGG | - | chr2_1:2607668-2607687 | Msa0187840:intron | 50.0% | |
| CCAATAGTTCCTGAAGACGG+CGG | + | chr2_1:2607699-2607718 | None:intergenic | 50.0% | |
| CGATTGCATCTCGATGCCTT+AGG | - | chr2_1:2607928-2607947 | Msa0187840:intron | 50.0% | |
| GTTCACCAACACACATGCAC+TGG | - | chr2_1:2608533-2608552 | Msa0187840:intron | 50.0% | |
| TGCGTAAAGAGTCAGAGCTC+GGG | - | chr2_1:2609047-2609066 | Msa0187840:CDS | 50.0% | |
| TTCAGCAGGAGGATTGTCCT+CGG | + | chr2_1:2609086-2609105 | None:intergenic | 50.0% | |
| ! | TGCCAAAACTACCGATTGCC+AGG | - | chr2_1:2609135-2609154 | Msa0187840:CDS | 50.0% |
| ! | ACCTGGTAATTCTGAGGACG+AGG | - | chr2_1:2609204-2609223 | Msa0187840:CDS | 50.0% |
| ACCTCGTCCTCAGAATTACC+AGG | + | chr2_1:2609208-2609227 | None:intergenic | 50.0% | |
| GAGGACGAGGTTGACAAGAA+TGG | - | chr2_1:2609217-2609236 | Msa0187840:CDS | 50.0% | |
| ! | GGGACCTTGCTTTGTTGTGA+TGG | - | chr2_1:2609268-2609287 | Msa0187840:CDS | 50.0% |
| GTCCCGCTGCTTATCATTCA+AGG | - | chr2_1:2609293-2609312 | Msa0187840:CDS | 50.0% | |
| TTGCGTCGGAACCACCAAAA+CGG | - | chr2_1:2607238-2607257 | Msa0187840:CDS | 50.0% | |
| TCGGACAGCGTTGTTCGAAT+CGG | - | chr2_1:2607360-2607379 | Msa0187840:CDS | 50.0% | |
| ATGTTCGGATGCTGAGATGC+CGG | - | chr2_1:2607629-2607648 | Msa0187840:CDS | 50.0% | |
| ! | TGAGATGCCGGTTGAATTGC+CGG | - | chr2_1:2607641-2607660 | Msa0187840:CDS | 50.0% |
| AATGCCACCGGCAATTCAAC+CGG | + | chr2_1:2607651-2607670 | None:intergenic | 50.0% | |
| ATTAGAATTGCCGCCGCCTT+TGG | - | chr2_1:2607668-2607687 | Msa0187840:intron | 50.0% | |
| CCAATAGTTCCTGAAGACGG+CGG | + | chr2_1:2607699-2607718 | None:intergenic | 50.0% | |
| CGATTGCATCTCGATGCCTT+AGG | - | chr2_1:2607928-2607947 | Msa0187840:intron | 50.0% | |
| GTTCACCAACACACATGCAC+TGG | - | chr2_1:2608533-2608552 | Msa0187840:intron | 50.0% | |
| TGCGTAAAGAGTCAGAGCTC+GGG | - | chr2_1:2609047-2609066 | Msa0187840:CDS | 50.0% | |
| TTCAGCAGGAGGATTGTCCT+CGG | + | chr2_1:2609086-2609105 | None:intergenic | 50.0% | |
| ! | TGCCAAAACTACCGATTGCC+AGG | - | chr2_1:2609135-2609154 | Msa0187840:CDS | 50.0% |
| ! | ACCTGGTAATTCTGAGGACG+AGG | - | chr2_1:2609204-2609223 | Msa0187840:CDS | 50.0% |
| ACCTCGTCCTCAGAATTACC+AGG | + | chr2_1:2609208-2609227 | None:intergenic | 50.0% | |
| GAGGACGAGGTTGACAAGAA+TGG | - | chr2_1:2609217-2609236 | Msa0187840:CDS | 50.0% | |
| ! | GGGACCTTGCTTTGTTGTGA+TGG | - | chr2_1:2609268-2609287 | Msa0187840:CDS | 50.0% |
| GTCCCGCTGCTTATCATTCA+AGG | - | chr2_1:2609293-2609312 | Msa0187840:CDS | 50.0% | |
| TCGGAACCACCAAAACGGAG+AGG | - | chr2_1:2607243-2607262 | Msa0187840:CDS | 55.0% | |
| CAAAACGGAGAGGTCGACCA+CGG | - | chr2_1:2607253-2607272 | Msa0187840:CDS | 55.0% | |
| GGCGGCAATTCTAATGCCAC+CGG | + | chr2_1:2607663-2607682 | None:intergenic | 55.0% | |
| GAAGACGGCGGTAACTCCAA+AGG | + | chr2_1:2607687-2607706 | None:intergenic | 55.0% | |
| TTGGAGTTACCGCCGTCTTC+AGG | - | chr2_1:2607687-2607706 | Msa0187840:intron | 55.0% | |
| CCGCCGTCTTCAGGAACTAT+TGG | - | chr2_1:2607696-2607715 | Msa0187840:intron | 55.0% | |
| CAAGCTCCATTCACTGCACC+TGG | + | chr2_1:2608825-2608844 | None:intergenic | 55.0% | |
| CGGGAAGAATTACGATGCCG+AGG | - | chr2_1:2609066-2609085 | Msa0187840:CDS | 55.0% | |
| GGAGATGAATGTCGCCTCTG+TGG | - | chr2_1:2609238-2609257 | Msa0187840:CDS | 55.0% | |
| TGAATGTCGCCTCTGTGGCA+TGG | - | chr2_1:2609243-2609262 | Msa0187840:CDS | 55.0% | |
| TCGGAACCACCAAAACGGAG+AGG | - | chr2_1:2607243-2607262 | Msa0187840:CDS | 55.0% | |
| CAAAACGGAGAGGTCGACCA+CGG | - | chr2_1:2607253-2607272 | Msa0187840:CDS | 55.0% | |
| GGCGGCAATTCTAATGCCAC+CGG | + | chr2_1:2607663-2607682 | None:intergenic | 55.0% | |
| GAAGACGGCGGTAACTCCAA+AGG | + | chr2_1:2607687-2607706 | None:intergenic | 55.0% | |
| TTGGAGTTACCGCCGTCTTC+AGG | - | chr2_1:2607687-2607706 | Msa0187840:intron | 55.0% | |
| CCGCCGTCTTCAGGAACTAT+TGG | - | chr2_1:2607696-2607715 | Msa0187840:intron | 55.0% | |
| CAAGCTCCATTCACTGCACC+TGG | + | chr2_1:2608825-2608844 | None:intergenic | 55.0% | |
| CGGGAAGAATTACGATGCCG+AGG | - | chr2_1:2609066-2609085 | Msa0187840:CDS | 55.0% | |
| GGAGATGAATGTCGCCTCTG+TGG | - | chr2_1:2609238-2609257 | Msa0187840:CDS | 55.0% | |
| TGAATGTCGCCTCTGTGGCA+TGG | - | chr2_1:2609243-2609262 | Msa0187840:CDS | 55.0% | |
| ! | GGTCGACCTCTCCGTTTTGG+TGG | + | chr2_1:2607252-2607271 | None:intergenic | 60.0% |
| ! | CGTGGTCGACCTCTCCGTTT+TGG | + | chr2_1:2607255-2607274 | None:intergenic | 60.0% |
| ! | GATGCCGGTTGAATTGCCGG+TGG | - | chr2_1:2607644-2607663 | Msa0187840:CDS | 60.0% |
| GACGGCGGTAACTCCAAAGG+CGG | + | chr2_1:2607684-2607703 | None:intergenic | 60.0% | |
| TCCGCTGCGCTATAGCAGAG+CGG | + | chr2_1:2608103-2608122 | None:intergenic | 60.0% | |
| TGTCGCCTCTGTGGCATGGA+TGG | - | chr2_1:2609247-2609266 | Msa0187840:CDS | 60.0% | |
| GTCGCCTCTGTGGCATGGAT+GGG | - | chr2_1:2609248-2609267 | Msa0187840:CDS | 60.0% | |
| AGGTCCCATCCATGCCACAG+AGG | + | chr2_1:2609255-2609274 | None:intergenic | 60.0% | |
| ! | GGTCGACCTCTCCGTTTTGG+TGG | + | chr2_1:2607252-2607271 | None:intergenic | 60.0% |
| ! | CGTGGTCGACCTCTCCGTTT+TGG | + | chr2_1:2607255-2607274 | None:intergenic | 60.0% |
| ! | GATGCCGGTTGAATTGCCGG+TGG | - | chr2_1:2607644-2607663 | Msa0187840:CDS | 60.0% |
| GACGGCGGTAACTCCAAAGG+CGG | + | chr2_1:2607684-2607703 | None:intergenic | 60.0% | |
| TCCGCTGCGCTATAGCAGAG+CGG | + | chr2_1:2608103-2608122 | None:intergenic | 60.0% | |
| TGTCGCCTCTGTGGCATGGA+TGG | - | chr2_1:2609247-2609266 | Msa0187840:CDS | 60.0% | |
| GTCGCCTCTGTGGCATGGAT+GGG | - | chr2_1:2609248-2609267 | Msa0187840:CDS | 60.0% | |
| AGGTCCCATCCATGCCACAG+AGG | + | chr2_1:2609255-2609274 | None:intergenic | 60.0% | |
| ACCACCGGGGGATCTTGCGT+CGG | - | chr2_1:2607224-2607243 | Msa0187840:CDS | 65.0% | |
| GGTTCCGACGCAAGATCCCC+CGG | + | chr2_1:2607231-2607250 | None:intergenic | 65.0% | |
| GGCGGTAACTCCAAAGGCGG+CGG | + | chr2_1:2607681-2607700 | None:intergenic | 65.0% | |
| GCCGCTCTGCTATAGCGCAG+CGG | - | chr2_1:2608099-2608118 | Msa0187840:intron | 65.0% | |
| ACCACCGGGGGATCTTGCGT+CGG | - | chr2_1:2607224-2607243 | Msa0187840:CDS | 65.0% | |
| GGTTCCGACGCAAGATCCCC+CGG | + | chr2_1:2607231-2607250 | None:intergenic | 65.0% | |
| GGCGGTAACTCCAAAGGCGG+CGG | + | chr2_1:2607681-2607700 | None:intergenic | 65.0% | |
| GCCGCTCTGCTATAGCGCAG+CGG | - | chr2_1:2608099-2608118 | Msa0187840:intron | 65.0% | |
| GACGCAAGATCCCCCGGTGG+TGG | + | chr2_1:2607225-2607244 | None:intergenic | 70.0% | |
| TCCGACGCAAGATCCCCCGG+TGG | + | chr2_1:2607228-2607247 | None:intergenic | 70.0% | |
| GACGCAAGATCCCCCGGTGG+TGG | + | chr2_1:2607225-2607244 | None:intergenic | 70.0% | |
| TCCGACGCAAGATCCCCCGG+TGG | + | chr2_1:2607228-2607247 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 2607216 | 2609342 | 2607216 | ID=Msa0187840;Name=Msa0187840 |
| chr2_1 | mRNA | 2607216 | 2609342 | 2607216 | ID=Msa0187840-mRNA-1;Parent=Msa0187840;Name=Msa0187840-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|2|0|402 |
| chr2_1 | exon | 2608586 | 2609342 | 2608586 | ID=Msa0187840-mRNA-1:exon:1240;Parent=Msa0187840-mRNA-1 |
| chr2_1 | exon | 2607216 | 2607667 | 2607216 | ID=Msa0187840-mRNA-1:exon:1239;Parent=Msa0187840-mRNA-1 |
| chr2_1 | CDS | 2608586 | 2609342 | 2608586 | ID=Msa0187840-mRNA-1:cds;Parent=Msa0187840-mRNA-1 |
| chr2_1 | CDS | 2607216 | 2607667 | 2607216 | ID=Msa0187840-mRNA-1:cds;Parent=Msa0187840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
