Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0192180 | XP_003593604.1 | 85.014 | 347 | 35 | 4 | 1 | 341 | 1 | 336 | 9.24e-160 | 460 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0192180 | sp|Q8LDR0|DOF54_ARATH | 61.957 | 92 | 29 | 2 | 18 | 109 | 44 | 129 | 1.04e-31 | 124 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0192180 | G7ISC2 | 85.014 | 347 | 35 | 4 | 1 | 341 | 1 | 336 | 4.41e-160 | 460 |
Gene ID | Type | Classification |
---|---|---|
Msa0192180 | TF | C2C2-Dof |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0192180 | MtrunA17_Chr2g0282441 | 85.014 | 347 | 35 | 4 | 1 | 341 | 1 | 336 | 8.50e-164 | 460 |
Msa0192180 | MtrunA17_Chr2g0328021 | 64.444 | 90 | 26 | 2 | 12 | 95 | 45 | 134 | 1.61e-33 | 125 |
Msa0192180 | MtrunA17_Chr8g0346551 | 64.706 | 85 | 29 | 1 | 19 | 102 | 17 | 101 | 2.53e-32 | 121 |
Msa0192180 | MtrunA17_Chr8g0367161 | 84.127 | 63 | 9 | 1 | 26 | 88 | 33 | 94 | 4.40e-31 | 120 |
Msa0192180 | MtrunA17_Chr4g0030051 | 76.471 | 68 | 13 | 2 | 11 | 76 | 26 | 92 | 8.20e-31 | 118 |
Msa0192180 | MtrunA17_Chr7g0223311 | 55.882 | 102 | 34 | 2 | 11 | 111 | 62 | 153 | 1.04e-30 | 119 |
Msa0192180 | MtrunA17_Chr2g0326001 | 77.049 | 61 | 11 | 1 | 22 | 79 | 34 | 94 | 1.36e-29 | 115 |
Msa0192180 | MtrunA17_Chr4g0047001 | 64.706 | 85 | 19 | 2 | 26 | 100 | 56 | 139 | 1.62e-29 | 116 |
Msa0192180 | MtrunA17_Chr3g0127201 | 73.846 | 65 | 14 | 1 | 19 | 80 | 18 | 82 | 2.73e-29 | 114 |
Msa0192180 | MtrunA17_Chr3g0126201 | 70.769 | 65 | 16 | 1 | 17 | 81 | 46 | 107 | 6.10e-29 | 114 |
Msa0192180 | MtrunA17_Chr3g0117601 | 81.818 | 55 | 10 | 0 | 21 | 75 | 57 | 111 | 7.39e-29 | 114 |
Msa0192180 | MtrunA17_Chr5g0411951 | 86.792 | 53 | 7 | 0 | 23 | 75 | 41 | 93 | 1.18e-28 | 113 |
Msa0192180 | MtrunA17_Chr7g0237921 | 64.865 | 74 | 25 | 1 | 6 | 79 | 58 | 130 | 1.64e-28 | 113 |
Msa0192180 | MtrunA17_Chr1g0188851 | 65.217 | 69 | 19 | 1 | 18 | 81 | 31 | 99 | 3.28e-28 | 111 |
Msa0192180 | MtrunA17_Chr4g0010151 | 65.333 | 75 | 21 | 2 | 10 | 79 | 62 | 136 | 7.54e-28 | 111 |
Msa0192180 | MtrunA17_Chr4g0061761 | 86.000 | 50 | 7 | 0 | 26 | 75 | 41 | 90 | 8.05e-28 | 110 |
Msa0192180 | MtrunA17_Chr4g0031411 | 40.000 | 175 | 66 | 5 | 22 | 181 | 71 | 221 | 1.50e-27 | 110 |
Msa0192180 | MtrunA17_Chr1g0177251 | 79.245 | 53 | 11 | 0 | 27 | 79 | 14 | 66 | 9.22e-27 | 107 |
Msa0192180 | MtrunA17_Chr2g0308011 | 85.417 | 48 | 7 | 0 | 26 | 73 | 38 | 85 | 1.16e-26 | 105 |
Msa0192180 | MtrunA17_Chr8g0374111 | 62.667 | 75 | 23 | 2 | 22 | 91 | 22 | 96 | 2.98e-26 | 104 |
Msa0192180 | MtrunA17_Chr8g0341671 | 71.186 | 59 | 17 | 0 | 26 | 84 | 21 | 79 | 1.35e-25 | 102 |
Msa0192180 | MtrunA17_Chr2g0282511 | 87.500 | 48 | 6 | 0 | 26 | 73 | 46 | 93 | 1.51e-25 | 104 |
Msa0192180 | MtrunA17_Chr2g0282051 | 62.857 | 70 | 23 | 2 | 14 | 81 | 33 | 101 | 6.62e-24 | 99.0 |
Msa0192180 | MtrunA17_Chr3g0092111 | 66.667 | 57 | 19 | 0 | 27 | 83 | 138 | 194 | 1.33e-23 | 101 |
Msa0192180 | MtrunA17_Chr4g0047761 | 74.545 | 55 | 13 | 1 | 27 | 81 | 74 | 127 | 1.45e-23 | 99.0 |
Msa0192180 | MtrunA17_Chr7g0217581 | 70.370 | 54 | 16 | 0 | 27 | 80 | 234 | 287 | 4.49e-23 | 100 |
Msa0192180 | MtrunA17_Chr4g0042481 | 66.667 | 57 | 19 | 0 | 27 | 83 | 124 | 180 | 6.24e-23 | 99.0 |
Msa0192180 | MtrunA17_Chr7g0254161 | 69.811 | 53 | 16 | 0 | 26 | 78 | 102 | 154 | 6.70e-23 | 98.6 |
Msa0192180 | MtrunA17_Chr6g0453321 | 52.273 | 88 | 33 | 2 | 17 | 95 | 125 | 212 | 1.38e-22 | 98.2 |
Msa0192180 | MtrunA17_Chr8g0355261 | 66.667 | 54 | 18 | 0 | 27 | 80 | 120 | 173 | 1.50e-22 | 97.8 |
Msa0192180 | MtrunA17_Chr2g0283811 | 69.231 | 52 | 16 | 0 | 27 | 78 | 49 | 100 | 2.11e-22 | 92.0 |
Msa0192180 | MtrunA17_Chr6g0460721 | 64.815 | 54 | 19 | 0 | 26 | 79 | 90 | 143 | 3.66e-22 | 95.5 |
Msa0192180 | MtrunA17_Chr6g0460731 | 40.310 | 129 | 59 | 3 | 26 | 151 | 97 | 210 | 3.97e-22 | 95.9 |
Msa0192180 | MtrunA17_Chr5g0417571 | 54.545 | 77 | 31 | 1 | 4 | 80 | 121 | 193 | 9.86e-21 | 91.3 |
Msa0192180 | MtrunA17_Chr5g0417551 | 63.793 | 58 | 21 | 0 | 27 | 84 | 129 | 186 | 7.64e-20 | 89.4 |
Msa0192180 | MtrunA17_Chr5g0417601 | 65.385 | 52 | 18 | 0 | 27 | 78 | 142 | 193 | 9.45e-20 | 89.4 |
Msa0192180 | MtrunA17_Chr5g0417561 | 63.793 | 58 | 21 | 0 | 27 | 84 | 121 | 178 | 1.74e-19 | 88.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0192180 | AT5G60850.1 | 61.957 | 92 | 29 | 2 | 18 | 109 | 44 | 129 | 1.06e-32 | 124 |
Msa0192180 | AT5G60200.1 | 72.059 | 68 | 15 | 1 | 22 | 85 | 48 | 115 | 7.58e-32 | 120 |
Msa0192180 | AT5G62940.1 | 73.913 | 69 | 13 | 1 | 7 | 75 | 60 | 123 | 1.69e-31 | 122 |
Msa0192180 | AT2G28510.1 | 75.806 | 62 | 15 | 0 | 23 | 84 | 46 | 107 | 2.64e-30 | 117 |
Msa0192180 | AT5G65590.1 | 44.578 | 166 | 71 | 5 | 15 | 177 | 31 | 178 | 1.39e-29 | 115 |
Msa0192180 | AT1G07640.1 | 66.216 | 74 | 23 | 1 | 8 | 79 | 2 | 75 | 1.65e-29 | 114 |
Msa0192180 | AT1G51700.1 | 66.667 | 75 | 23 | 1 | 26 | 100 | 34 | 106 | 1.82e-29 | 112 |
Msa0192180 | AT1G07640.2 | 66.216 | 74 | 23 | 1 | 8 | 79 | 58 | 131 | 2.72e-29 | 115 |
Msa0192180 | AT1G07640.3 | 66.216 | 74 | 23 | 1 | 8 | 79 | 66 | 139 | 3.54e-29 | 115 |
Msa0192180 | AT3G52440.1 | 71.212 | 66 | 19 | 0 | 27 | 92 | 27 | 92 | 3.97e-29 | 112 |
Msa0192180 | AT3G61850.2 | 61.176 | 85 | 30 | 2 | 19 | 102 | 55 | 137 | 4.06e-29 | 114 |
Msa0192180 | AT3G61850.3 | 61.176 | 85 | 30 | 2 | 19 | 102 | 55 | 137 | 4.06e-29 | 114 |
Msa0192180 | AT3G52440.2 | 71.212 | 66 | 19 | 0 | 27 | 92 | 46 | 111 | 4.94e-29 | 113 |
Msa0192180 | AT3G61850.1 | 61.176 | 85 | 30 | 2 | 19 | 102 | 67 | 149 | 5.07e-29 | 114 |
Msa0192180 | AT3G61850.5 | 61.176 | 85 | 30 | 2 | 19 | 102 | 55 | 137 | 5.56e-29 | 114 |
Msa0192180 | AT3G45610.1 | 70.312 | 64 | 19 | 0 | 23 | 86 | 38 | 101 | 7.29e-29 | 112 |
Msa0192180 | AT3G61850.4 | 61.176 | 85 | 30 | 2 | 19 | 102 | 67 | 149 | 7.46e-29 | 114 |
Msa0192180 | AT2G28810.2 | 63.380 | 71 | 26 | 0 | 6 | 76 | 58 | 128 | 1.34e-28 | 113 |
Msa0192180 | AT2G37590.1 | 76.786 | 56 | 13 | 0 | 26 | 81 | 90 | 145 | 1.51e-28 | 113 |
Msa0192180 | AT2G28810.1 | 63.380 | 71 | 26 | 0 | 6 | 76 | 75 | 145 | 1.78e-28 | 113 |
Msa0192180 | AT4G21050.1 | 66.176 | 68 | 23 | 0 | 22 | 89 | 21 | 88 | 3.59e-28 | 109 |
Msa0192180 | AT3G55370.1 | 75.000 | 60 | 15 | 0 | 27 | 86 | 78 | 137 | 4.36e-28 | 112 |
Msa0192180 | AT3G55370.2 | 75.000 | 60 | 15 | 0 | 27 | 86 | 78 | 137 | 5.08e-28 | 112 |
Msa0192180 | AT5G66940.1 | 49.091 | 110 | 51 | 3 | 27 | 131 | 34 | 143 | 6.09e-28 | 109 |
Msa0192180 | AT3G55370.3 | 64.384 | 73 | 23 | 1 | 17 | 86 | 110 | 182 | 6.95e-28 | 112 |
Msa0192180 | AT1G21340.1 | 75.862 | 58 | 14 | 0 | 27 | 84 | 40 | 97 | 1.15e-27 | 109 |
Msa0192180 | AT1G28310.1 | 80.357 | 56 | 11 | 0 | 26 | 81 | 28 | 83 | 1.18e-27 | 110 |
Msa0192180 | AT1G28310.2 | 80.357 | 56 | 11 | 0 | 26 | 81 | 52 | 107 | 1.80e-27 | 110 |
Msa0192180 | AT4G00940.1 | 75.439 | 57 | 14 | 0 | 23 | 79 | 66 | 122 | 1.95e-27 | 109 |
Msa0192180 | AT4G00940.3 | 75.439 | 57 | 14 | 0 | 23 | 79 | 66 | 122 | 1.95e-27 | 109 |
Msa0192180 | AT4G00940.2 | 75.439 | 57 | 14 | 0 | 23 | 79 | 66 | 122 | 1.95e-27 | 109 |
Msa0192180 | AT4G38000.1 | 50.833 | 120 | 39 | 3 | 26 | 143 | 42 | 143 | 3.59e-27 | 107 |
Msa0192180 | AT5G02460.1 | 58.696 | 92 | 37 | 1 | 26 | 117 | 96 | 186 | 1.41e-26 | 109 |
Msa0192180 | AT3G21270.1 | 84.314 | 51 | 8 | 0 | 26 | 76 | 30 | 80 | 1.59e-26 | 104 |
Msa0192180 | AT4G24060.1 | 73.684 | 57 | 15 | 0 | 23 | 79 | 51 | 107 | 4.41e-26 | 107 |
Msa0192180 | AT3G50410.1 | 77.193 | 57 | 12 | 1 | 27 | 82 | 32 | 88 | 4.67e-26 | 104 |
Msa0192180 | AT2G46590.1 | 74.545 | 55 | 13 | 1 | 19 | 72 | 61 | 115 | 1.68e-24 | 102 |
Msa0192180 | AT1G47655.1 | 74.510 | 51 | 13 | 0 | 23 | 73 | 27 | 77 | 1.73e-24 | 99.4 |
Msa0192180 | AT1G64620.1 | 66.129 | 62 | 16 | 1 | 18 | 74 | 37 | 98 | 1.88e-24 | 102 |
Msa0192180 | AT2G46590.2 | 74.545 | 55 | 13 | 1 | 19 | 72 | 73 | 127 | 1.98e-24 | 102 |
Msa0192180 | AT5G62430.1 | 52.500 | 80 | 35 | 1 | 2 | 78 | 28 | 107 | 2.90e-23 | 98.2 |
Msa0192180 | AT4G21040.1 | 62.687 | 67 | 25 | 0 | 27 | 93 | 27 | 93 | 4.50e-23 | 96.3 |
Msa0192180 | AT3G47500.1 | 70.370 | 54 | 16 | 0 | 27 | 80 | 112 | 165 | 6.38e-23 | 99.4 |
Msa0192180 | AT1G69570.1 | 58.209 | 67 | 28 | 0 | 12 | 78 | 119 | 185 | 1.35e-22 | 97.8 |
Msa0192180 | AT5G39660.3 | 57.971 | 69 | 25 | 1 | 10 | 78 | 127 | 191 | 2.14e-22 | 97.8 |
Msa0192180 | AT5G39660.1 | 57.971 | 69 | 25 | 1 | 10 | 78 | 127 | 191 | 2.14e-22 | 97.8 |
Msa0192180 | AT5G39660.2 | 57.971 | 69 | 25 | 1 | 10 | 78 | 127 | 191 | 2.14e-22 | 97.8 |
Msa0192180 | AT2G34140.1 | 57.746 | 71 | 27 | 1 | 11 | 78 | 41 | 111 | 4.47e-22 | 92.0 |
Msa0192180 | AT1G29160.1 | 59.701 | 67 | 24 | 1 | 15 | 78 | 49 | 115 | 5.78e-22 | 91.7 |
Msa0192180 | AT4G21080.1 | 71.154 | 52 | 15 | 0 | 27 | 78 | 27 | 78 | 1.18e-21 | 92.8 |
Msa0192180 | AT1G26790.1 | 65.385 | 52 | 18 | 0 | 27 | 78 | 113 | 164 | 1.36e-20 | 92.0 |
Msa0192180 | AT4G21030.1 | 48.611 | 72 | 37 | 0 | 22 | 93 | 18 | 89 | 2.97e-16 | 76.6 |
Find 94 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGCCTCTGATCAATCTTTA+TGG | 0.208599 | 2_1:+7907110 | Msa0192180:CDS |
GGGTAGTGGATCTGCTTCTT+TGG | 0.299081 | 2_1:+7907270 | Msa0192180:CDS |
CAACATTGAAACCTTGTAAA+AGG | 0.337370 | 2_1:-7906865 | None:intergenic |
GGTAGCGGTGATGTTGCTGC+TGG | 0.358687 | 2_1:+7907247 | Msa0192180:CDS |
CTTCTTTGGCTCTGAATCAA+TGG | 0.377878 | 2_1:+7907284 | Msa0192180:CDS |
GTTGGAGTTGGTGTTGGTCT+TGG | 0.379165 | 2_1:+7906824 | Msa0192180:CDS |
TGGTGTTGAGGATGAAGTTT+TGG | 0.384562 | 2_1:-7906552 | None:intergenic |
TTCTTTCAACTAGGTGGTAA+TGG | 0.386741 | 2_1:+7906944 | Msa0192180:CDS |
GTAGCGGTGATGTTGCTGCT+GGG | 0.397946 | 2_1:+7907248 | Msa0192180:CDS |
TTCCCTAAGGAATTACTTGA+TGG | 0.409259 | 2_1:-7906572 | None:intergenic |
TGTTGCGGCGGTGGACGATT+CGG | 0.409978 | 2_1:-7906920 | None:intergenic |
CTGCTACTTATAATGAAAGT+TGG | 0.411866 | 2_1:+7907056 | Msa0192180:CDS |
TGAAAGAATTGTTGCGGCGG+TGG | 0.414683 | 2_1:-7906929 | None:intergenic |
ACACCATCAAGTAATTCCTT+AGG | 0.417503 | 2_1:+7906569 | Msa0192180:CDS |
CCACTATTGATGAAGCTTTG+AGG | 0.422498 | 2_1:-7907079 | None:intergenic |
TGTGCTGAAGAGTGTGTTGA+TGG | 0.423312 | 2_1:-7906773 | None:intergenic |
ATCAACACCACTTCAACTAA+TGG | 0.426570 | 2_1:+7907139 | Msa0192180:CDS |
AATCAATGGCATGATCTGTC+AGG | 0.428092 | 2_1:+7907298 | Msa0192180:CDS |
GTTGGTGTTGGAGTTGGTGT+TGG | 0.430153 | 2_1:+7906818 | Msa0192180:CDS |
GTGGCAGTGTTGGCCGAGAC+AGG | 0.438645 | 2_1:-7906601 | None:intergenic |
GCTGGTGGTAGCCGTGGTGC+TGG | 0.442217 | 2_1:+7907223 | Msa0192180:CDS |
CCATCGCAGCCATGGTCAAC+TGG | 0.443933 | 2_1:-7906634 | None:intergenic |
TATTGGTGGTGGTTGTCGTA+AGG | 0.444825 | 2_1:+7906520 | Msa0192180:CDS |
GCAAAACATGCAGAAGGTAC+TGG | 0.452080 | 2_1:+7906468 | Msa0192180:CDS |
GAATGATTAAATGCCGCAAA+AGG | 0.453309 | 2_1:-7906737 | None:intergenic |
GGTAGTCGTGGTGTTGGTGC+TGG | 0.457080 | 2_1:+7907205 | Msa0192180:CDS |
CAGAATGTTGGTGTTGGAGT+TGG | 0.465123 | 2_1:+7906812 | Msa0192180:CDS |
GTAGCATTAACCATGCTAGA+TGG | 0.472281 | 2_1:-7907013 | None:intergenic |
ATTGGTGTTGGTGCTGATGC+TGG | 0.475218 | 2_1:+7907181 | Msa0192180:CDS |
CACCATCAAGTAATTCCTTA+GGG | 0.476186 | 2_1:+7906570 | Msa0192180:CDS |
TTACGACAACCACCACCAAT+AGG | 0.480617 | 2_1:-7906518 | None:intergenic |
ACATTGAGAAATGTTCCTAT+TGG | 0.486939 | 2_1:+7906503 | Msa0192180:CDS |
TAGGGAATTCTTCCCTGTCT+CGG | 0.487674 | 2_1:+7906588 | Msa0192180:CDS |
TCCACCACCATTAGTTGAAG+TGG | 0.494139 | 2_1:-7907146 | None:intergenic |
CCTCAAAGCTTCATCAATAG+TGG | 0.497822 | 2_1:+7907079 | Msa0192180:CDS |
AGCCGTGGTGCTGGTGGTAG+CGG | 0.499787 | 2_1:+7907232 | Msa0192180:CDS |
CTAGGACACTTCTGAGGTTG+AGG | 0.509691 | 2_1:-7906377 | None:intergenic |
CTCAACCTCAGAAGTGTCCT+AGG | 0.514646 | 2_1:+7906378 | Msa0192180:CDS |
CCGCAACAATTCTTTCAACT+AGG | 0.517280 | 2_1:+7906935 | Msa0192180:CDS |
TTTGAACAGTCTCAGAATGT+TGG | 0.527603 | 2_1:+7906800 | Msa0192180:CDS |
CCAGTTGACCATGGCTGCGA+TGG | 0.534868 | 2_1:+7906634 | Msa0192180:CDS |
ACCACTTCAACTAATGGTGG+TGG | 0.543681 | 2_1:+7907145 | Msa0192180:CDS |
TTTGATTCCTCCATCTAGCA+TGG | 0.549167 | 2_1:+7907003 | Msa0192180:CDS |
ATTGGTGGTGGTTGTCGTAA+GGG | 0.550492 | 2_1:+7906521 | Msa0192180:CDS |
CGCAGCCATGGTCAACTGGT+CGG | 0.551583 | 2_1:-7906630 | None:intergenic |
TTGAGAAATGTTCCTATTGG+TGG | 0.552839 | 2_1:+7906506 | Msa0192180:CDS |
TCGGTTGATTGTGGCAGTGT+TGG | 0.553797 | 2_1:-7906611 | None:intergenic |
TAGCGGTGATGTTGCTGCTG+GGG | 0.555623 | 2_1:+7907249 | Msa0192180:CDS |
GCTGGTGGTAGTCGTGGTGT+TGG | 0.556337 | 2_1:+7907199 | Msa0192180:CDS |
AGAAATGTTCCTATTGGTGG+TGG | 0.559899 | 2_1:+7906509 | Msa0192180:CDS |
AAGAACGTGGTGATGGTGGA+AGG | 0.564755 | 2_1:+7906321 | Msa0192180:CDS |
GTTGTTGTAATAGCAGAACT+TGG | 0.576616 | 2_1:-7906417 | None:intergenic |
TGCAGAAGGTACTGGACTCA+AGG | 0.580923 | 2_1:+7906476 | Msa0192180:CDS |
CGTGGTGATGGTGGAAGGAG+AGG | 0.581943 | 2_1:+7906326 | Msa0192180:CDS |
TGGCAGTGTTGGCCGAGACA+GGG | 0.584331 | 2_1:-7906600 | None:intergenic |
GTCAACTGGTCGGTTGATTG+TGG | 0.591951 | 2_1:-7906620 | None:intergenic |
ATTCAAACCTCGTGGTTCAG+AGG | 0.592802 | 2_1:-7906981 | None:intergenic |
GCTCTTGTAAGCTCATCACA+AGG | 0.593430 | 2_1:+7906896 | Msa0192180:CDS |
GAGCAAGAACGTGGTGATGG+TGG | 0.595958 | 2_1:+7906317 | Msa0192180:CDS |
CAGTCTCAGAATGTTGGTGT+TGG | 0.601097 | 2_1:+7906806 | Msa0192180:CDS |
AGCGGTGATGTTGCTGCTGG+GGG | 0.601330 | 2_1:+7907250 | Msa0192180:CDS |
GGTGGTAGCCGTGGTGCTGG+TGG | 0.612351 | 2_1:+7907226 | Msa0192180:CDS |
CAACAATTCTTTCAACTAGG+TGG | 0.614943 | 2_1:+7906938 | Msa0192180:CDS |
AGTCGTGGTGTTGGTGCTGG+TGG | 0.615015 | 2_1:+7907208 | Msa0192180:CDS |
ATCAATGGCATGATCTGTCA+GGG | 0.615122 | 2_1:+7907299 | Msa0192180:CDS |
GGAATTACTTGATGGTGTTG+AGG | 0.615613 | 2_1:-7906564 | None:intergenic |
TCTTCTGCAAAACATGCAGA+AGG | 0.615692 | 2_1:+7906462 | Msa0192180:CDS |
GTTGGTGCTGGTGGTAGCCG+TGG | 0.616357 | 2_1:+7907217 | Msa0192180:CDS |
GGTGGAAATTCTGAAAGGAT+TGG | 0.619425 | 2_1:+7907163 | Msa0192180:CDS |
AGAAGAAACGAGGCTGAGAG+AGG | 0.619615 | 2_1:-7906445 | None:intergenic |
ATGGAGCAAGAACGTGGTGA+TGG | 0.620486 | 2_1:+7906314 | Msa0192180:CDS |
CGTGGTTCAGAGGTAAACAT+TGG | 0.628309 | 2_1:-7906971 | None:intergenic |
GCTGATGCTGGTGGTAGTCG+TGG | 0.632658 | 2_1:+7907193 | Msa0192180:CDS |
ATGGTGGTGGAAATTCTGAA+AGG | 0.635909 | 2_1:+7907158 | Msa0192180:CDS |
AATTCTGAAAGGATTGGTGT+TGG | 0.637664 | 2_1:+7907169 | Msa0192180:CDS |
AACACCACTTCAACTAATGG+TGG | 0.642679 | 2_1:+7907142 | Msa0192180:CDS |
TTTCAACTAGGTGGTAATGG+AGG | 0.647517 | 2_1:+7906947 | Msa0192180:CDS |
CCTAGTTGAAAGAATTGTTG+CGG | 0.647938 | 2_1:-7906935 | None:intergenic |
CACCGCTACCACCAGCACCA+CGG | 0.647987 | 2_1:-7907234 | None:intergenic |
AGACAGGGAAGAATTCCCTA+AGG | 0.652666 | 2_1:-7906585 | None:intergenic |
GCATTAACCATGCTAGATGG+AGG | 0.653768 | 2_1:-7907010 | None:intergenic |
TCACACCTAGGACACTTCTG+AGG | 0.655155 | 2_1:-7906383 | None:intergenic |
GGTGTTGGTGCTGATGCTGG+TGG | 0.655433 | 2_1:+7907184 | Msa0192180:CDS |
ATCAACCGACCAGTTGACCA+TGG | 0.659300 | 2_1:+7906625 | Msa0192180:CDS |
CATCAACAAGATCACTGAGG+AGG | 0.672156 | 2_1:-7907328 | None:intergenic |
GGAATCAAATTCAAACCTCG+TGG | 0.678570 | 2_1:-7906989 | None:intergenic |
TGAGAGATGGAGCAAGAACG+TGG | 0.685685 | 2_1:+7906308 | None:intergenic |
AGTTGAAAGAATTGTTGCGG+CGG | 0.685998 | 2_1:-7906932 | None:intergenic |
CTCTTGTAAGCTCATCACAA+GGG | 0.687168 | 2_1:+7906897 | Msa0192180:CDS |
ACTCCATAAAGATTGATCAG+AGG | 0.693689 | 2_1:-7907113 | None:intergenic |
GTGTTGAATGAATCACACCT+AGG | 0.703840 | 2_1:-7906395 | None:intergenic |
AGAAGGTACTGGACTCAAGG+TGG | 0.711298 | 2_1:+7906479 | Msa0192180:CDS |
ATGTTTACCTCTGAACCACG+AGG | 0.723992 | 2_1:+7906974 | Msa0192180:CDS |
CAACATCAACAAGATCACTG+AGG | 0.799835 | 2_1:-7907331 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ACATTGAGAAATGTTCCTAT+TGG | + | chr2_1:7906503-7906522 | Msa0192180:CDS | 30.0% | |
! | TCAAATTTGAGCCTTTTACA+AGG | + | chr2_1:7906854-7906873 | Msa0192180:CDS | 30.0% |
CAACATTGAAACCTTGTAAA+AGG | - | chr2_1:7906868-7906887 | None:intergenic | 30.0% | |
! | CTGCTACTTATAATGAAAGT+TGG | + | chr2_1:7907056-7907075 | Msa0192180:CDS | 30.0% |
ACATTGAGAAATGTTCCTAT+TGG | + | chr2_1:7906503-7906522 | Msa0192180:CDS | 30.0% | |
! | TCAAATTTGAGCCTTTTACA+AGG | + | chr2_1:7906854-7906873 | Msa0192180:CDS | 30.0% |
CAACATTGAAACCTTGTAAA+AGG | - | chr2_1:7906868-7906887 | None:intergenic | 30.0% | |
! | CTGCTACTTATAATGAAAGT+TGG | + | chr2_1:7907056-7907075 | Msa0192180:CDS | 30.0% |
GTTGTTGTAATAGCAGAACT+TGG | - | chr2_1:7906420-7906439 | None:intergenic | 35.0% | |
TTGAGAAATGTTCCTATTGG+TGG | + | chr2_1:7906506-7906525 | Msa0192180:CDS | 35.0% | |
ACACCATCAAGTAATTCCTT+AGG | + | chr2_1:7906569-7906588 | Msa0192180:CDS | 35.0% | |
CACCATCAAGTAATTCCTTA+GGG | + | chr2_1:7906570-7906589 | Msa0192180:CDS | 35.0% | |
TTCCCTAAGGAATTACTTGA+TGG | - | chr2_1:7906575-7906594 | None:intergenic | 35.0% | |
TTGATAAAAAGAAGCAGCAG+AGG | - | chr2_1:7906693-7906712 | None:intergenic | 35.0% | |
!! | TCTGCTGCTTCTTTTTATCA+AGG | + | chr2_1:7906692-7906711 | Msa0192180:CDS | 35.0% |
!!! | TTTTATCAAGGAGGTGTTGT+TGG | + | chr2_1:7906704-7906723 | Msa0192180:CDS | 35.0% |
GAATGATTAAATGCCGCAAA+AGG | - | chr2_1:7906740-7906759 | None:intergenic | 35.0% | |
TTTGAACAGTCTCAGAATGT+TGG | + | chr2_1:7906800-7906819 | Msa0192180:CDS | 35.0% | |
CCTAGTTGAAAGAATTGTTG+CGG | - | chr2_1:7906938-7906957 | None:intergenic | 35.0% | |
CAACAATTCTTTCAACTAGG+TGG | + | chr2_1:7906938-7906957 | Msa0192180:CDS | 35.0% | |
TTCTTTCAACTAGGTGGTAA+TGG | + | chr2_1:7906944-7906963 | Msa0192180:CDS | 35.0% | |
ACTCCATAAAGATTGATCAG+AGG | - | chr2_1:7907116-7907135 | None:intergenic | 35.0% | |
ATCAACACCACTTCAACTAA+TGG | + | chr2_1:7907139-7907158 | Msa0192180:CDS | 35.0% | |
! | AATTCTGAAAGGATTGGTGT+TGG | + | chr2_1:7907169-7907188 | Msa0192180:CDS | 35.0% |
GTTGTTGTAATAGCAGAACT+TGG | - | chr2_1:7906420-7906439 | None:intergenic | 35.0% | |
TTGAGAAATGTTCCTATTGG+TGG | + | chr2_1:7906506-7906525 | Msa0192180:CDS | 35.0% | |
ACACCATCAAGTAATTCCTT+AGG | + | chr2_1:7906569-7906588 | Msa0192180:CDS | 35.0% | |
CACCATCAAGTAATTCCTTA+GGG | + | chr2_1:7906570-7906589 | Msa0192180:CDS | 35.0% | |
TTCCCTAAGGAATTACTTGA+TGG | - | chr2_1:7906575-7906594 | None:intergenic | 35.0% | |
TTGATAAAAAGAAGCAGCAG+AGG | - | chr2_1:7906693-7906712 | None:intergenic | 35.0% | |
!! | TCTGCTGCTTCTTTTTATCA+AGG | + | chr2_1:7906692-7906711 | Msa0192180:CDS | 35.0% |
!!! | TTTTATCAAGGAGGTGTTGT+TGG | + | chr2_1:7906704-7906723 | Msa0192180:CDS | 35.0% |
GAATGATTAAATGCCGCAAA+AGG | - | chr2_1:7906740-7906759 | None:intergenic | 35.0% | |
TTTGAACAGTCTCAGAATGT+TGG | + | chr2_1:7906800-7906819 | Msa0192180:CDS | 35.0% | |
CCTAGTTGAAAGAATTGTTG+CGG | - | chr2_1:7906938-7906957 | None:intergenic | 35.0% | |
CAACAATTCTTTCAACTAGG+TGG | + | chr2_1:7906938-7906957 | Msa0192180:CDS | 35.0% | |
TTCTTTCAACTAGGTGGTAA+TGG | + | chr2_1:7906944-7906963 | Msa0192180:CDS | 35.0% | |
ACTCCATAAAGATTGATCAG+AGG | - | chr2_1:7907116-7907135 | None:intergenic | 35.0% | |
ATCAACACCACTTCAACTAA+TGG | + | chr2_1:7907139-7907158 | Msa0192180:CDS | 35.0% | |
! | AATTCTGAAAGGATTGGTGT+TGG | + | chr2_1:7907169-7907188 | Msa0192180:CDS | 35.0% |
GTGTTGAATGAATCACACCT+AGG | - | chr2_1:7906398-7906417 | None:intergenic | 40.0% | |
! | CATGTTTTGCAGAAGAAACG+AGG | - | chr2_1:7906458-7906477 | None:intergenic | 40.0% |
TCTTCTGCAAAACATGCAGA+AGG | + | chr2_1:7906462-7906481 | Msa0192180:CDS | 40.0% | |
AGAAATGTTCCTATTGGTGG+TGG | + | chr2_1:7906509-7906528 | Msa0192180:CDS | 40.0% | |
!! | TGGTGTTGAGGATGAAGTTT+TGG | - | chr2_1:7906555-7906574 | None:intergenic | 40.0% |
!! | GGAATTACTTGATGGTGTTG+AGG | - | chr2_1:7906567-7906586 | None:intergenic | 40.0% |
! | GCTGCTTCTTTTTATCAAGG+AGG | + | chr2_1:7906695-7906714 | Msa0192180:CDS | 40.0% |
CTCTTGTAAGCTCATCACAA+GGG | + | chr2_1:7906897-7906916 | Msa0192180:CDS | 40.0% | |
AGTTGAAAGAATTGTTGCGG+CGG | - | chr2_1:7906935-7906954 | None:intergenic | 40.0% | |
CCGCAACAATTCTTTCAACT+AGG | + | chr2_1:7906935-7906954 | Msa0192180:CDS | 40.0% | |
!! | TTTCAACTAGGTGGTAATGG+AGG | + | chr2_1:7906947-7906966 | Msa0192180:CDS | 40.0% |
GGAATCAAATTCAAACCTCG+TGG | - | chr2_1:7906992-7907011 | None:intergenic | 40.0% | |
TTTGATTCCTCCATCTAGCA+TGG | + | chr2_1:7907003-7907022 | Msa0192180:CDS | 40.0% | |
GTAGCATTAACCATGCTAGA+TGG | - | chr2_1:7907016-7907035 | None:intergenic | 40.0% | |
CCACTATTGATGAAGCTTTG+AGG | - | chr2_1:7907082-7907101 | None:intergenic | 40.0% | |
CCTCAAAGCTTCATCAATAG+TGG | + | chr2_1:7907079-7907098 | Msa0192180:CDS | 40.0% | |
GAGCCTCTGATCAATCTTTA+TGG | + | chr2_1:7907110-7907129 | Msa0192180:CDS | 40.0% | |
AACACCACTTCAACTAATGG+TGG | + | chr2_1:7907142-7907161 | Msa0192180:CDS | 40.0% | |
!! | ATGGTGGTGGAAATTCTGAA+AGG | + | chr2_1:7907158-7907177 | Msa0192180:CDS | 40.0% |
! | GGTGGAAATTCTGAAAGGAT+TGG | + | chr2_1:7907163-7907182 | Msa0192180:CDS | 40.0% |
!! | CTTCTTTGGCTCTGAATCAA+TGG | + | chr2_1:7907284-7907303 | Msa0192180:CDS | 40.0% |
AATCAATGGCATGATCTGTC+AGG | + | chr2_1:7907298-7907317 | Msa0192180:CDS | 40.0% | |
ATCAATGGCATGATCTGTCA+GGG | + | chr2_1:7907299-7907318 | Msa0192180:CDS | 40.0% | |
GTGTTGAATGAATCACACCT+AGG | - | chr2_1:7906398-7906417 | None:intergenic | 40.0% | |
! | CATGTTTTGCAGAAGAAACG+AGG | - | chr2_1:7906458-7906477 | None:intergenic | 40.0% |
TCTTCTGCAAAACATGCAGA+AGG | + | chr2_1:7906462-7906481 | Msa0192180:CDS | 40.0% | |
AGAAATGTTCCTATTGGTGG+TGG | + | chr2_1:7906509-7906528 | Msa0192180:CDS | 40.0% | |
!! | TGGTGTTGAGGATGAAGTTT+TGG | - | chr2_1:7906555-7906574 | None:intergenic | 40.0% |
!! | GGAATTACTTGATGGTGTTG+AGG | - | chr2_1:7906567-7906586 | None:intergenic | 40.0% |
! | GCTGCTTCTTTTTATCAAGG+AGG | + | chr2_1:7906695-7906714 | Msa0192180:CDS | 40.0% |
CTCTTGTAAGCTCATCACAA+GGG | + | chr2_1:7906897-7906916 | Msa0192180:CDS | 40.0% | |
AGTTGAAAGAATTGTTGCGG+CGG | - | chr2_1:7906935-7906954 | None:intergenic | 40.0% | |
CCGCAACAATTCTTTCAACT+AGG | + | chr2_1:7906935-7906954 | Msa0192180:CDS | 40.0% | |
!! | TTTCAACTAGGTGGTAATGG+AGG | + | chr2_1:7906947-7906966 | Msa0192180:CDS | 40.0% |
GGAATCAAATTCAAACCTCG+TGG | - | chr2_1:7906992-7907011 | None:intergenic | 40.0% | |
TTTGATTCCTCCATCTAGCA+TGG | + | chr2_1:7907003-7907022 | Msa0192180:CDS | 40.0% | |
GTAGCATTAACCATGCTAGA+TGG | - | chr2_1:7907016-7907035 | None:intergenic | 40.0% | |
CCACTATTGATGAAGCTTTG+AGG | - | chr2_1:7907082-7907101 | None:intergenic | 40.0% | |
CCTCAAAGCTTCATCAATAG+TGG | + | chr2_1:7907079-7907098 | Msa0192180:CDS | 40.0% | |
GAGCCTCTGATCAATCTTTA+TGG | + | chr2_1:7907110-7907129 | Msa0192180:CDS | 40.0% | |
AACACCACTTCAACTAATGG+TGG | + | chr2_1:7907142-7907161 | Msa0192180:CDS | 40.0% | |
!! | ATGGTGGTGGAAATTCTGAA+AGG | + | chr2_1:7907158-7907177 | Msa0192180:CDS | 40.0% |
! | GGTGGAAATTCTGAAAGGAT+TGG | + | chr2_1:7907163-7907182 | Msa0192180:CDS | 40.0% |
!! | CTTCTTTGGCTCTGAATCAA+TGG | + | chr2_1:7907284-7907303 | Msa0192180:CDS | 40.0% |
AATCAATGGCATGATCTGTC+AGG | + | chr2_1:7907298-7907317 | Msa0192180:CDS | 40.0% | |
ATCAATGGCATGATCTGTCA+GGG | + | chr2_1:7907299-7907318 | Msa0192180:CDS | 40.0% | |
! | GCAAAACATGCAGAAGGTAC+TGG | + | chr2_1:7906468-7906487 | Msa0192180:CDS | 45.0% |
TTACGACAACCACCACCAAT+AGG | - | chr2_1:7906521-7906540 | None:intergenic | 45.0% | |
!! | TATTGGTGGTGGTTGTCGTA+AGG | + | chr2_1:7906520-7906539 | Msa0192180:CDS | 45.0% |
!! | ATTGGTGGTGGTTGTCGTAA+GGG | + | chr2_1:7906521-7906540 | Msa0192180:CDS | 45.0% |
AGACAGGGAAGAATTCCCTA+AGG | - | chr2_1:7906588-7906607 | None:intergenic | 45.0% | |
TAGGGAATTCTTCCCTGTCT+CGG | + | chr2_1:7906588-7906607 | Msa0192180:CDS | 45.0% | |
! | TGGTTACATGTCGCCTTTTG+CGG | + | chr2_1:7906724-7906743 | Msa0192180:CDS | 45.0% |
! | TGTGCTGAAGAGTGTGTTGA+TGG | - | chr2_1:7906776-7906795 | None:intergenic | 45.0% |
CAGTCTCAGAATGTTGGTGT+TGG | + | chr2_1:7906806-7906825 | Msa0192180:CDS | 45.0% | |
!! | CAGAATGTTGGTGTTGGAGT+TGG | + | chr2_1:7906812-7906831 | Msa0192180:CDS | 45.0% |
GCTCTTGTAAGCTCATCACA+AGG | + | chr2_1:7906896-7906915 | Msa0192180:CDS | 45.0% | |
CGTGGTTCAGAGGTAAACAT+TGG | - | chr2_1:7906974-7906993 | None:intergenic | 45.0% | |
ATGTTTACCTCTGAACCACG+AGG | + | chr2_1:7906974-7906993 | Msa0192180:CDS | 45.0% | |
ATTCAAACCTCGTGGTTCAG+AGG | - | chr2_1:7906984-7907003 | None:intergenic | 45.0% | |
GCATTAACCATGCTAGATGG+AGG | - | chr2_1:7907013-7907032 | None:intergenic | 45.0% | |
ACCACTTCAACTAATGGTGG+TGG | + | chr2_1:7907145-7907164 | Msa0192180:CDS | 45.0% | |
TCCACCACCATTAGTTGAAG+TGG | - | chr2_1:7907149-7907168 | None:intergenic | 45.0% | |
! | GCAAAACATGCAGAAGGTAC+TGG | + | chr2_1:7906468-7906487 | Msa0192180:CDS | 45.0% |
TTACGACAACCACCACCAAT+AGG | - | chr2_1:7906521-7906540 | None:intergenic | 45.0% | |
!! | TATTGGTGGTGGTTGTCGTA+AGG | + | chr2_1:7906520-7906539 | Msa0192180:CDS | 45.0% |
!! | ATTGGTGGTGGTTGTCGTAA+GGG | + | chr2_1:7906521-7906540 | Msa0192180:CDS | 45.0% |
AGACAGGGAAGAATTCCCTA+AGG | - | chr2_1:7906588-7906607 | None:intergenic | 45.0% | |
TAGGGAATTCTTCCCTGTCT+CGG | + | chr2_1:7906588-7906607 | Msa0192180:CDS | 45.0% | |
! | TGGTTACATGTCGCCTTTTG+CGG | + | chr2_1:7906724-7906743 | Msa0192180:CDS | 45.0% |
! | TGTGCTGAAGAGTGTGTTGA+TGG | - | chr2_1:7906776-7906795 | None:intergenic | 45.0% |
CAGTCTCAGAATGTTGGTGT+TGG | + | chr2_1:7906806-7906825 | Msa0192180:CDS | 45.0% | |
!! | CAGAATGTTGGTGTTGGAGT+TGG | + | chr2_1:7906812-7906831 | Msa0192180:CDS | 45.0% |
GCTCTTGTAAGCTCATCACA+AGG | + | chr2_1:7906896-7906915 | Msa0192180:CDS | 45.0% | |
CGTGGTTCAGAGGTAAACAT+TGG | - | chr2_1:7906974-7906993 | None:intergenic | 45.0% | |
ATGTTTACCTCTGAACCACG+AGG | + | chr2_1:7906974-7906993 | Msa0192180:CDS | 45.0% | |
ATTCAAACCTCGTGGTTCAG+AGG | - | chr2_1:7906984-7907003 | None:intergenic | 45.0% | |
GCATTAACCATGCTAGATGG+AGG | - | chr2_1:7907013-7907032 | None:intergenic | 45.0% | |
ACCACTTCAACTAATGGTGG+TGG | + | chr2_1:7907145-7907164 | Msa0192180:CDS | 45.0% | |
TCCACCACCATTAGTTGAAG+TGG | - | chr2_1:7907149-7907168 | None:intergenic | 45.0% | |
ATGGAGCAAGAACGTGGTGA+TGG | + | chr2_1:7906314-7906333 | Msa0192180:CDS | 50.0% | |
!! | AAGAACGTGGTGATGGTGGA+AGG | + | chr2_1:7906321-7906340 | Msa0192180:CDS | 50.0% |
!! | CTAGGACACTTCTGAGGTTG+AGG | - | chr2_1:7906380-7906399 | None:intergenic | 50.0% |
!! | CTCAACCTCAGAAGTGTCCT+AGG | + | chr2_1:7906378-7906397 | Msa0192180:CDS | 50.0% |
TCACACCTAGGACACTTCTG+AGG | - | chr2_1:7906386-7906405 | None:intergenic | 50.0% | |
AGAAGAAACGAGGCTGAGAG+AGG | - | chr2_1:7906448-7906467 | None:intergenic | 50.0% | |
!! | TGCAGAAGGTACTGGACTCA+AGG | + | chr2_1:7906476-7906495 | Msa0192180:CDS | 50.0% |
!! | AGAAGGTACTGGACTCAAGG+TGG | + | chr2_1:7906479-7906498 | Msa0192180:CDS | 50.0% |
TCGGTTGATTGTGGCAGTGT+TGG | - | chr2_1:7906614-7906633 | None:intergenic | 50.0% | |
GTCAACTGGTCGGTTGATTG+TGG | - | chr2_1:7906623-7906642 | None:intergenic | 50.0% | |
ATCAACCGACCAGTTGACCA+TGG | + | chr2_1:7906625-7906644 | Msa0192180:CDS | 50.0% | |
!!! | GTTTTTAGCCATCGCAGCCA+TGG | - | chr2_1:7906645-7906664 | None:intergenic | 50.0% |
!! | GTTGGTGTTGGAGTTGGTGT+TGG | + | chr2_1:7906818-7906837 | Msa0192180:CDS | 50.0% |
!! | GTTGGAGTTGGTGTTGGTCT+TGG | + | chr2_1:7906824-7906843 | Msa0192180:CDS | 50.0% |
TGAAAGAATTGTTGCGGCGG+TGG | - | chr2_1:7906932-7906951 | None:intergenic | 50.0% | |
!! | ATTGGTGTTGGTGCTGATGC+TGG | + | chr2_1:7907181-7907200 | Msa0192180:CDS | 50.0% |
!! | GGGTAGTGGATCTGCTTCTT+TGG | + | chr2_1:7907270-7907289 | Msa0192180:CDS | 50.0% |
ATGGAGCAAGAACGTGGTGA+TGG | + | chr2_1:7906314-7906333 | Msa0192180:CDS | 50.0% | |
!! | AAGAACGTGGTGATGGTGGA+AGG | + | chr2_1:7906321-7906340 | Msa0192180:CDS | 50.0% |
!! | CTAGGACACTTCTGAGGTTG+AGG | - | chr2_1:7906380-7906399 | None:intergenic | 50.0% |
!! | CTCAACCTCAGAAGTGTCCT+AGG | + | chr2_1:7906378-7906397 | Msa0192180:CDS | 50.0% |
TCACACCTAGGACACTTCTG+AGG | - | chr2_1:7906386-7906405 | None:intergenic | 50.0% | |
AGAAGAAACGAGGCTGAGAG+AGG | - | chr2_1:7906448-7906467 | None:intergenic | 50.0% | |
!! | TGCAGAAGGTACTGGACTCA+AGG | + | chr2_1:7906476-7906495 | Msa0192180:CDS | 50.0% |
!! | AGAAGGTACTGGACTCAAGG+TGG | + | chr2_1:7906479-7906498 | Msa0192180:CDS | 50.0% |
TCGGTTGATTGTGGCAGTGT+TGG | - | chr2_1:7906614-7906633 | None:intergenic | 50.0% | |
GTCAACTGGTCGGTTGATTG+TGG | - | chr2_1:7906623-7906642 | None:intergenic | 50.0% | |
ATCAACCGACCAGTTGACCA+TGG | + | chr2_1:7906625-7906644 | Msa0192180:CDS | 50.0% | |
!!! | GTTTTTAGCCATCGCAGCCA+TGG | - | chr2_1:7906645-7906664 | None:intergenic | 50.0% |
!! | GTTGGTGTTGGAGTTGGTGT+TGG | + | chr2_1:7906818-7906837 | Msa0192180:CDS | 50.0% |
!! | GTTGGAGTTGGTGTTGGTCT+TGG | + | chr2_1:7906824-7906843 | Msa0192180:CDS | 50.0% |
TGAAAGAATTGTTGCGGCGG+TGG | - | chr2_1:7906932-7906951 | None:intergenic | 50.0% | |
!! | ATTGGTGTTGGTGCTGATGC+TGG | + | chr2_1:7907181-7907200 | Msa0192180:CDS | 50.0% |
!! | GGGTAGTGGATCTGCTTCTT+TGG | + | chr2_1:7907270-7907289 | Msa0192180:CDS | 50.0% |
!! | GAGCAAGAACGTGGTGATGG+TGG | + | chr2_1:7906317-7906336 | Msa0192180:CDS | 55.0% |
GTAGCGGTGATGTTGCTGCT+GGG | + | chr2_1:7907248-7907267 | Msa0192180:CDS | 55.0% | |
TAGCGGTGATGTTGCTGCTG+GGG | + | chr2_1:7907249-7907268 | Msa0192180:CDS | 55.0% | |
!! | GAGCAAGAACGTGGTGATGG+TGG | + | chr2_1:7906317-7906336 | Msa0192180:CDS | 55.0% |
GTAGCGGTGATGTTGCTGCT+GGG | + | chr2_1:7907248-7907267 | Msa0192180:CDS | 55.0% | |
TAGCGGTGATGTTGCTGCTG+GGG | + | chr2_1:7907249-7907268 | Msa0192180:CDS | 55.0% | |
!! | CGTGGTGATGGTGGAAGGAG+AGG | + | chr2_1:7906326-7906345 | Msa0192180:CDS | 60.0% |
!! | TGGCAGTGTTGGCCGAGACA+GGG | - | chr2_1:7906603-7906622 | None:intergenic | 60.0% |
CGCAGCCATGGTCAACTGGT+CGG | - | chr2_1:7906633-7906652 | None:intergenic | 60.0% | |
CCATCGCAGCCATGGTCAAC+TGG | - | chr2_1:7906637-7906656 | None:intergenic | 60.0% | |
CCAGTTGACCATGGCTGCGA+TGG | + | chr2_1:7906634-7906653 | Msa0192180:CDS | 60.0% | |
TGTTGCGGCGGTGGACGATT+CGG | - | chr2_1:7906923-7906942 | None:intergenic | 60.0% | |
!! | GGTGTTGGTGCTGATGCTGG+TGG | + | chr2_1:7907184-7907203 | Msa0192180:CDS | 60.0% |
GCTGATGCTGGTGGTAGTCG+TGG | + | chr2_1:7907193-7907212 | Msa0192180:CDS | 60.0% | |
GCTGGTGGTAGTCGTGGTGT+TGG | + | chr2_1:7907199-7907218 | Msa0192180:CDS | 60.0% | |
!! | GGTAGTCGTGGTGTTGGTGC+TGG | + | chr2_1:7907205-7907224 | Msa0192180:CDS | 60.0% |
!! | AGTCGTGGTGTTGGTGCTGG+TGG | + | chr2_1:7907208-7907227 | Msa0192180:CDS | 60.0% |
! | GGTAGCGGTGATGTTGCTGC+TGG | + | chr2_1:7907247-7907266 | Msa0192180:CDS | 60.0% |
AGCGGTGATGTTGCTGCTGG+GGG | + | chr2_1:7907250-7907269 | Msa0192180:CDS | 60.0% | |
GATGTTGCTGCTGGGGGTAG+TGG | + | chr2_1:7907256-7907275 | Msa0192180:CDS | 60.0% | |
!! | CGTGGTGATGGTGGAAGGAG+AGG | + | chr2_1:7906326-7906345 | Msa0192180:CDS | 60.0% |
!! | TGGCAGTGTTGGCCGAGACA+GGG | - | chr2_1:7906603-7906622 | None:intergenic | 60.0% |
CGCAGCCATGGTCAACTGGT+CGG | - | chr2_1:7906633-7906652 | None:intergenic | 60.0% | |
CCATCGCAGCCATGGTCAAC+TGG | - | chr2_1:7906637-7906656 | None:intergenic | 60.0% | |
CCAGTTGACCATGGCTGCGA+TGG | + | chr2_1:7906634-7906653 | Msa0192180:CDS | 60.0% | |
TGTTGCGGCGGTGGACGATT+CGG | - | chr2_1:7906923-7906942 | None:intergenic | 60.0% | |
!! | GGTGTTGGTGCTGATGCTGG+TGG | + | chr2_1:7907184-7907203 | Msa0192180:CDS | 60.0% |
GCTGATGCTGGTGGTAGTCG+TGG | + | chr2_1:7907193-7907212 | Msa0192180:CDS | 60.0% | |
GCTGGTGGTAGTCGTGGTGT+TGG | + | chr2_1:7907199-7907218 | Msa0192180:CDS | 60.0% | |
!! | GGTAGTCGTGGTGTTGGTGC+TGG | + | chr2_1:7907205-7907224 | Msa0192180:CDS | 60.0% |
!! | AGTCGTGGTGTTGGTGCTGG+TGG | + | chr2_1:7907208-7907227 | Msa0192180:CDS | 60.0% |
! | GGTAGCGGTGATGTTGCTGC+TGG | + | chr2_1:7907247-7907266 | Msa0192180:CDS | 60.0% |
AGCGGTGATGTTGCTGCTGG+GGG | + | chr2_1:7907250-7907269 | Msa0192180:CDS | 60.0% | |
GATGTTGCTGCTGGGGGTAG+TGG | + | chr2_1:7907256-7907275 | Msa0192180:CDS | 60.0% | |
!! | GTGGCAGTGTTGGCCGAGAC+AGG | - | chr2_1:7906604-7906623 | None:intergenic | 65.0% |
!! | GTTGGTGCTGGTGGTAGCCG+TGG | + | chr2_1:7907217-7907236 | Msa0192180:CDS | 65.0% |
!! | AGCCGTGGTGCTGGTGGTAG+CGG | + | chr2_1:7907232-7907251 | Msa0192180:CDS | 65.0% |
CACCGCTACCACCAGCACCA+CGG | - | chr2_1:7907237-7907256 | None:intergenic | 65.0% | |
!! | GTGGCAGTGTTGGCCGAGAC+AGG | - | chr2_1:7906604-7906623 | None:intergenic | 65.0% |
!! | GTTGGTGCTGGTGGTAGCCG+TGG | + | chr2_1:7907217-7907236 | Msa0192180:CDS | 65.0% |
!! | AGCCGTGGTGCTGGTGGTAG+CGG | + | chr2_1:7907232-7907251 | Msa0192180:CDS | 65.0% |
CACCGCTACCACCAGCACCA+CGG | - | chr2_1:7907237-7907256 | None:intergenic | 65.0% | |
GCTGGTGGTAGCCGTGGTGC+TGG | + | chr2_1:7907223-7907242 | Msa0192180:CDS | 70.0% | |
! | GGTGGTAGCCGTGGTGCTGG+TGG | + | chr2_1:7907226-7907245 | Msa0192180:CDS | 70.0% |
GCTGGTGGTAGCCGTGGTGC+TGG | + | chr2_1:7907223-7907242 | Msa0192180:CDS | 70.0% | |
! | GGTGGTAGCCGTGGTGCTGG+TGG | + | chr2_1:7907226-7907245 | Msa0192180:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 7906314 | 7907339 | 7906314 | ID=Msa0192180;Name=Msa0192180 |
chr2_1 | mRNA | 7906314 | 7907339 | 7906314 | ID=Msa0192180-mRNA-1;Parent=Msa0192180;Name=Msa0192180-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|341 |
chr2_1 | exon | 7906314 | 7907339 | 7906314 | ID=Msa0192180-mRNA-1:exon:3667;Parent=Msa0192180-mRNA-1 |
chr2_1 | CDS | 7906314 | 7907339 | 7906314 | ID=Msa0192180-mRNA-1:cds;Parent=Msa0192180-mRNA-1 |
Gene Sequence |
Protein sequence |