Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194050 | XP_003593809.2 | 77.518 | 427 | 51 | 3 | 1 | 427 | 2 | 383 | 0.0 | 631 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194050 | sp|O49403|HFA4A_ARATH | 43.902 | 328 | 164 | 8 | 2 | 320 | 3 | 319 | 2.43e-70 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194050 | G7ILT3 | 77.518 | 427 | 51 | 3 | 1 | 427 | 2 | 383 | 0.0 | 631 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0194050 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194050 | MtrunA17_Chr2g0284481 | 77.518 | 427 | 51 | 3 | 1 | 427 | 2 | 383 | 0.0 | 631 |
| Msa0194050 | MtrunA17_Chr8g0379701 | 47.879 | 330 | 161 | 4 | 1 | 329 | 1 | 320 | 9.50e-101 | 306 |
| Msa0194050 | MtrunA17_Chr5g0410881 | 43.684 | 190 | 98 | 3 | 13 | 198 | 31 | 215 | 1.52e-49 | 175 |
| Msa0194050 | MtrunA17_Chr4g0039891 | 39.175 | 194 | 102 | 3 | 12 | 198 | 10 | 194 | 2.13e-44 | 161 |
| Msa0194050 | MtrunA17_Chr3g0135831 | 39.151 | 212 | 109 | 6 | 13 | 216 | 45 | 244 | 4.45e-42 | 152 |
| Msa0194050 | MtrunA17_Chr7g0260331 | 40.323 | 186 | 106 | 1 | 13 | 198 | 48 | 228 | 1.01e-41 | 151 |
| Msa0194050 | MtrunA17_Chr2g0301521 | 54.676 | 139 | 63 | 0 | 103 | 241 | 1 | 139 | 4.36e-41 | 144 |
| Msa0194050 | MtrunA17_Chr4g0071051 | 40.580 | 207 | 105 | 5 | 13 | 219 | 100 | 288 | 1.47e-40 | 149 |
| Msa0194050 | MtrunA17_Chr6g0467041 | 58.407 | 113 | 42 | 1 | 4 | 116 | 12 | 119 | 2.30e-40 | 146 |
| Msa0194050 | MtrunA17_Chr2g0330821 | 39.706 | 204 | 105 | 4 | 1 | 198 | 60 | 251 | 5.32e-40 | 146 |
| Msa0194050 | MtrunA17_Chr1g0204741 | 37.306 | 193 | 112 | 2 | 5 | 197 | 31 | 214 | 1.68e-39 | 144 |
| Msa0194050 | MtrunA17_Chr8g0378061 | 38.426 | 216 | 101 | 7 | 15 | 218 | 23 | 218 | 1.28e-38 | 145 |
| Msa0194050 | MtrunA17_Chr8g0392001 | 42.932 | 191 | 100 | 3 | 12 | 198 | 20 | 205 | 3.03e-38 | 142 |
| Msa0194050 | MtrunA17_Chr6g0485571 | 39.247 | 186 | 101 | 3 | 12 | 197 | 9 | 182 | 2.52e-37 | 139 |
| Msa0194050 | MtrunA17_Chr5g0402291 | 40.449 | 178 | 71 | 3 | 14 | 161 | 9 | 181 | 1.12e-36 | 135 |
| Msa0194050 | MtrunA17_Chr1g0185131 | 36.788 | 193 | 103 | 3 | 5 | 197 | 23 | 196 | 3.27e-36 | 135 |
| Msa0194050 | MtrunA17_Chr8g0375041 | 40.606 | 165 | 77 | 4 | 12 | 161 | 7 | 165 | 1.39e-35 | 132 |
| Msa0194050 | MtrunA17_Chr5g0397881 | 54.464 | 112 | 45 | 2 | 2 | 112 | 11 | 117 | 5.04e-35 | 133 |
| Msa0194050 | MtrunA17_Chr3g0134031 | 58.095 | 105 | 38 | 2 | 8 | 111 | 17 | 116 | 1.62e-33 | 129 |
| Msa0194050 | MtrunA17_Chr1g0203601 | 52.252 | 111 | 47 | 2 | 3 | 112 | 6 | 111 | 1.29e-32 | 125 |
| Msa0194050 | MtrunA17_Chr5g0441531 | 54.286 | 105 | 42 | 2 | 8 | 111 | 18 | 117 | 6.68e-31 | 119 |
| Msa0194050 | MtrunA17_Chr6g0472421 | 53.608 | 97 | 40 | 1 | 14 | 110 | 33 | 124 | 1.77e-29 | 117 |
| Msa0194050 | MtrunA17_Chr7g0257331 | 45.455 | 110 | 55 | 1 | 14 | 123 | 22 | 126 | 2.01e-29 | 114 |
| Msa0194050 | MtrunA17_Chr4g0023771 | 65.385 | 78 | 26 | 1 | 1 | 77 | 2 | 79 | 1.11e-28 | 108 |
| Msa0194050 | MtrunA17_Chr4g0047421 | 33.516 | 182 | 96 | 5 | 14 | 188 | 33 | 196 | 1.24e-24 | 100 |
| Msa0194050 | MtrunA17_Chr4g0023781 | 50.000 | 116 | 41 | 2 | 294 | 409 | 3 | 101 | 1.94e-24 | 97.1 |
| Msa0194050 | MtrunA17_Chr1g0179321 | 59.677 | 62 | 25 | 0 | 12 | 73 | 47 | 108 | 1.95e-22 | 91.7 |
| Msa0194050 | MtrunA17_Chr2g0330841 | 27.805 | 205 | 116 | 7 | 77 | 262 | 39 | 230 | 2.05e-13 | 71.6 |
| Msa0194050 | MtrunA17_Chr1g0179311 | 25.954 | 131 | 89 | 2 | 70 | 197 | 2 | 127 | 3.66e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0194050 | AT4G18880.1 | 43.902 | 328 | 164 | 8 | 2 | 320 | 3 | 319 | 2.47e-71 | 230 |
| Msa0194050 | AT5G45710.3 | 39.466 | 337 | 155 | 7 | 1 | 337 | 1 | 288 | 8.88e-63 | 206 |
| Msa0194050 | AT5G45710.1 | 39.466 | 337 | 155 | 7 | 1 | 337 | 1 | 288 | 8.88e-63 | 206 |
| Msa0194050 | AT4G17750.1 | 41.837 | 196 | 98 | 2 | 13 | 197 | 51 | 241 | 1.57e-47 | 170 |
| Msa0194050 | AT2G26150.1 | 38.679 | 212 | 114 | 3 | 13 | 216 | 43 | 246 | 9.20e-46 | 162 |
| Msa0194050 | AT2G26150.4 | 38.679 | 212 | 114 | 3 | 13 | 216 | 43 | 246 | 9.20e-46 | 162 |
| Msa0194050 | AT1G32330.2 | 40.306 | 196 | 106 | 3 | 8 | 197 | 31 | 221 | 9.13e-44 | 159 |
| Msa0194050 | AT1G32330.1 | 40.306 | 196 | 106 | 3 | 8 | 197 | 31 | 221 | 1.03e-43 | 159 |
| Msa0194050 | AT3G02990.1 | 39.894 | 188 | 107 | 2 | 12 | 198 | 21 | 203 | 4.80e-43 | 157 |
| Msa0194050 | AT4G13980.1 | 38.756 | 209 | 109 | 4 | 15 | 217 | 24 | 219 | 2.69e-42 | 155 |
| Msa0194050 | AT5G16820.1 | 38.743 | 191 | 110 | 2 | 10 | 198 | 23 | 208 | 6.10e-42 | 154 |
| Msa0194050 | AT5G16820.2 | 38.743 | 191 | 110 | 2 | 10 | 198 | 23 | 208 | 6.10e-42 | 154 |
| Msa0194050 | AT5G03720.2 | 37.234 | 188 | 106 | 3 | 12 | 198 | 53 | 229 | 1.99e-40 | 149 |
| Msa0194050 | AT5G03720.1 | 37.234 | 188 | 106 | 3 | 12 | 198 | 53 | 229 | 1.99e-40 | 149 |
| Msa0194050 | AT3G22830.1 | 38.624 | 189 | 107 | 2 | 13 | 197 | 60 | 243 | 8.76e-40 | 147 |
| Msa0194050 | AT3G24520.1 | 39.247 | 186 | 82 | 4 | 12 | 197 | 15 | 169 | 2.95e-37 | 139 |
| Msa0194050 | AT5G62020.1 | 49.275 | 138 | 57 | 3 | 1 | 137 | 9 | 134 | 6.46e-37 | 137 |
| Msa0194050 | AT5G43840.1 | 40.314 | 191 | 86 | 5 | 11 | 197 | 14 | 180 | 1.01e-36 | 136 |
| Msa0194050 | AT1G67970.1 | 39.216 | 204 | 114 | 6 | 12 | 213 | 17 | 212 | 2.98e-36 | 137 |
| Msa0194050 | AT3G51910.1 | 35.233 | 193 | 102 | 3 | 5 | 197 | 20 | 189 | 2.36e-35 | 132 |
| Msa0194050 | AT3G63350.1 | 38.220 | 191 | 92 | 4 | 14 | 197 | 28 | 199 | 2.84e-35 | 132 |
| Msa0194050 | AT1G46264.1 | 57.143 | 112 | 39 | 3 | 1 | 111 | 23 | 126 | 1.51e-34 | 132 |
| Msa0194050 | AT5G54070.1 | 35.407 | 209 | 109 | 6 | 12 | 218 | 69 | 253 | 2.41e-32 | 125 |
| Msa0194050 | AT4G36990.1 | 55.340 | 103 | 41 | 1 | 14 | 116 | 14 | 111 | 4.52e-32 | 123 |
| Msa0194050 | AT2G41690.1 | 50.926 | 108 | 47 | 2 | 13 | 119 | 39 | 141 | 2.09e-31 | 120 |
| Msa0194050 | AT4G11660.1 | 55.670 | 97 | 38 | 1 | 14 | 110 | 59 | 150 | 2.87e-31 | 123 |
| Msa0194050 | AT5G45710.4 | 32.340 | 235 | 116 | 5 | 103 | 337 | 1 | 192 | 2.22e-24 | 101 |
| Msa0194050 | AT5G45710.2 | 32.340 | 235 | 116 | 5 | 103 | 337 | 1 | 192 | 2.22e-24 | 101 |
| Msa0194050 | AT4G18870.1 | 42.593 | 108 | 51 | 3 | 1 | 106 | 1 | 99 | 6.97e-20 | 89.7 |
| Msa0194050 | AT4G18870.1 | 46.237 | 93 | 45 | 1 | 14 | 106 | 146 | 233 | 1.09e-19 | 89.4 |
| Msa0194050 | AT2G26150.3 | 28.667 | 150 | 96 | 2 | 75 | 216 | 45 | 191 | 3.75e-16 | 79.0 |
| Msa0194050 | AT2G26150.2 | 28.667 | 150 | 96 | 2 | 75 | 216 | 45 | 191 | 3.75e-16 | 79.0 |
| Msa0194050 | AT1G77570.1 | 35.789 | 95 | 53 | 3 | 15 | 106 | 27 | 116 | 4.63e-13 | 67.0 |
| Msa0194050 | AT4G19630.1 | 32.609 | 92 | 60 | 1 | 15 | 106 | 12 | 101 | 2.07e-11 | 61.6 |
Find 85 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATTATAATAATGAATTT+TGG | 0.102504 | 2_1:-9913837 | Msa0194050:CDS |
| CAACTGATGACATTGTTTCT+TGG | 0.248061 | 2_1:-9915540 | Msa0194050:CDS |
| AGTTGCATACAAGATGTTAT+TGG | 0.278275 | 2_1:+9914132 | None:intergenic |
| AAAGGTACTTTAGACTCTTT+TGG | 0.279505 | 2_1:+9913747 | None:intergenic |
| AACTGATGACATTGTTTCTT+GGG | 0.286701 | 2_1:-9915539 | Msa0194050:CDS |
| TCTCACTAAGACTTATGATA+TGG | 0.289830 | 2_1:-9915575 | Msa0194050:CDS |
| GTTACGACGGATTGTTCTTC+TGG | 0.294091 | 2_1:+9913874 | None:intergenic |
| TCTTCTGGTTCAACAAAATC+AGG | 0.301153 | 2_1:+9913889 | None:intergenic |
| TGAAACTTGAGAAGTTATTA+TGG | 0.310950 | 2_1:+9915443 | None:intergenic |
| ATGCTAGCTACATTACAAAA+AGG | 0.320103 | 2_1:+9914357 | None:intergenic |
| TTATTATAATCAGTGGTAAC+CGG | 0.352910 | 2_1:+9913847 | None:intergenic |
| AGCTCAGTTGCATCATGATT+AGG | 0.360536 | 2_1:+9914006 | None:intergenic |
| GGCTCAGTTGCAACTGGATT+AGG | 0.367439 | 2_1:+9913967 | None:intergenic |
| CGGATGTCTTTGAAAATAAG+AGG | 0.384067 | 2_1:+9914194 | None:intergenic |
| AAGAAACCTGGGAATGAGTT+AGG | 0.397323 | 2_1:-9914435 | Msa0194050:CDS |
| CATGTCGACTTCTGGTGACC+TGG | 0.398347 | 2_1:+9914092 | None:intergenic |
| ACAGTACTCGAAGGGTCATT+TGG | 0.400137 | 2_1:-9914511 | Msa0194050:CDS |
| TGTCGATCGGATTCTGCTAA+TGG | 0.402849 | 2_1:+9914636 | None:intergenic |
| GGCTCAGTTGCAACTGGATC+AGG | 0.407148 | 2_1:+9914045 | None:intergenic |
| CTAGTCGAGTTGGCCAATAT+TGG | 0.417340 | 2_1:-9913774 | Msa0194050:CDS |
| GTTTCTTGAAATTCAGAGAA+AGG | 0.442458 | 2_1:-9914565 | Msa0194050:CDS |
| ACTGCTGGCTCAGTTGCAAC+TGG | 0.444286 | 2_1:+9913961 | None:intergenic |
| GGGAATGATGGAAGAAGCTC+AGG | 0.447000 | 2_1:-9915626 | None:intergenic |
| GAGAAAAGGAGGCACCTTAT+CGG | 0.448416 | 2_1:+9915594 | None:intergenic |
| CAATATTGGCCAACTCGACT+AGG | 0.462218 | 2_1:+9913775 | None:intergenic |
| CGAATCATCAATGACGAGTT+GGG | 0.464732 | 2_1:-9914241 | Msa0194050:CDS |
| TTGCAGAATGCTCATGGCCA+AGG | 0.472660 | 2_1:-9914669 | Msa0194050:CDS |
| ACATCCGGCTCAGTTGCAAC+TGG | 0.474094 | 2_1:+9914039 | None:intergenic |
| ATGGAGTTCATGTCGACTTC+TGG | 0.480577 | 2_1:+9914084 | None:intergenic |
| GATGACTCAATGAATTATGT+AGG | 0.484303 | 2_1:-9914159 | Msa0194050:CDS |
| ACAATACTTGCAGGACGAAT+CGG | 0.489021 | 2_1:-9913812 | Msa0194050:CDS |
| CATATACCTAACTCATTCCC+AGG | 0.495219 | 2_1:+9914429 | None:intergenic |
| GAGTCATCAAAATCTACATT+CGG | 0.497020 | 2_1:+9914174 | None:intergenic |
| TCATAAGTCTTAGTGAGAAA+AGG | 0.497418 | 2_1:+9915580 | None:intergenic |
| TGAAATTCAGAGAAAGGAAG+AGG | 0.498215 | 2_1:-9914559 | Msa0194050:CDS |
| GGTCAAGTGCTGAAGAAACC+TGG | 0.503718 | 2_1:-9914447 | Msa0194050:CDS |
| TTATTATGGTTAAAGTATTG+AGG | 0.507346 | 2_1:+9915457 | None:intergenic |
| TATTATAATCAGTGGTAACC+GGG | 0.513074 | 2_1:+9913848 | None:intergenic |
| TGCAGAATGCTCATGGCCAA+GGG | 0.514039 | 2_1:-9914668 | Msa0194050:CDS |
| GTCGAGTTGGCCAATATTGG+CGG | 0.514135 | 2_1:-9913771 | Msa0194050:CDS |
| GAAACAATGTCATCAGTTGA+AGG | 0.519956 | 2_1:+9915544 | None:intergenic |
| TCGAATCATCAATGACGAGT+TGG | 0.521047 | 2_1:-9914242 | Msa0194050:CDS |
| TGATCCAGTTGCAACTGAGC+CGG | 0.522036 | 2_1:-9914043 | Msa0194050:CDS |
| CATGAGCATTCTGCAAAGAA+TGG | 0.524881 | 2_1:+9914676 | None:intergenic |
| CATTCTTTGCAGAATGCTCA+TGG | 0.525994 | 2_1:-9914675 | Msa0194050:CDS |
| ACAATCCGTCGTAACGTCCC+CGG | 0.533897 | 2_1:-9913866 | Msa0194050:CDS |
| CTAATGGAGCAGCAACCCCT+TGG | 0.536840 | 2_1:+9914652 | None:intergenic |
| ATGTCGACTTCTGGTGACCT+GGG | 0.544064 | 2_1:+9914093 | None:intergenic |
| TCAGGGTAGTAGTTCCGATA+AGG | 0.544906 | 2_1:-9915608 | Msa0194050:CDS |
| TCGGAAGCATCGATTACTGC+TGG | 0.547244 | 2_1:+9913946 | None:intergenic |
| TTAGGATTAACAACTACATC+CGG | 0.548377 | 2_1:+9914024 | None:intergenic |
| GAAGATATCCCTAGTCGAGT+TGG | 0.551653 | 2_1:-9913784 | Msa0194050:CDS |
| CAAAGTGTGCTCTCTTATGT+TGG | 0.554182 | 2_1:-9914468 | Msa0194050:CDS |
| TACATTAAAGCCGCTTACAT+AGG | 0.564491 | 2_1:+9915405 | None:intergenic |
| TAAGACTTATGATATGGTTG+AGG | 0.565627 | 2_1:-9915569 | Msa0194050:CDS |
| TGGCTCAACTGCAACAAGAT+CGG | 0.566890 | 2_1:+9913927 | None:intergenic |
| ATCAATGACGAGTTGGGAGA+AGG | 0.568099 | 2_1:-9914235 | Msa0194050:CDS |
| AGCATTCAATGTCTGTCGAT+CGG | 0.568118 | 2_1:+9914623 | None:intergenic |
| AGCTAGCATTGAAGATCATG+TGG | 0.568546 | 2_1:-9914343 | Msa0194050:CDS |
| CAGCTTAATACCTATGTAAG+CGG | 0.572467 | 2_1:-9915415 | Msa0194050:CDS |
| AATATTGGCCAACTCGACTA+GGG | 0.574698 | 2_1:+9913776 | None:intergenic |
| GGATCAGGAACAACTACCAC+TGG | 0.574913 | 2_1:+9914060 | None:intergenic |
| AAATTCATTATTATAATCAG+TGG | 0.577476 | 2_1:+9913840 | None:intergenic |
| GATAAAATTACAGTACTCGA+AGG | 0.578742 | 2_1:-9914520 | Msa0194050:CDS |
| ACTGATGACATTGTTTCTTG+GGG | 0.579964 | 2_1:-9915538 | Msa0194050:CDS |
| GTCAAGTGCTGAAGAAACCT+GGG | 0.583533 | 2_1:-9914446 | Msa0194050:CDS |
| TCAGGGACAACTGCAACAGT+TGG | 0.589380 | 2_1:+9913907 | None:intergenic |
| TAATGATAGAAGAGACACAC+TGG | 0.597081 | 2_1:+9914287 | None:intergenic |
| AGGAACAACTACCACTGGCA+TGG | 0.597086 | 2_1:+9914065 | None:intergenic |
| CTTCTGGTTCAACAAAATCA+GGG | 0.603287 | 2_1:+9913890 | None:intergenic |
| GTCATTTGGAAACAGTGGAA+AGG | 0.611941 | 2_1:-9914497 | Msa0194050:CDS |
| TAAGTCTTAGTGAGAAAAGG+AGG | 0.624943 | 2_1:+9915583 | None:intergenic |
| TAGATGTTGAAGTTCAGCCC+AGG | 0.629376 | 2_1:-9914110 | Msa0194050:CDS |
| ATCTTATGAAGAATATCCAA+AGG | 0.635890 | 2_1:-9914716 | Msa0194050:CDS |
| ATAAAATTACAGTACTCGAA+GGG | 0.640506 | 2_1:-9914519 | Msa0194050:CDS |
| GTCTCTTCTATCATTAAACG+TGG | 0.666811 | 2_1:-9914280 | Msa0194050:CDS |
| CGACATGAACTCCATGCCAG+TGG | 0.675176 | 2_1:-9914076 | Msa0194050:CDS |
| GGTAACCGGGGACGTTACGA+CGG | 0.675622 | 2_1:+9913861 | None:intergenic |
| GCTAGCATTGAAGATCATGT+GGG | 0.675912 | 2_1:-9914342 | Msa0194050:CDS |
| AATGATAGAAGAGACACACT+GGG | 0.677326 | 2_1:+9914288 | None:intergenic |
| GCAGAATGCTCATGGCCAAG+GGG | 0.680435 | 2_1:-9914667 | Msa0194050:CDS |
| GAAGGGTCATTTGGAAACAG+TGG | 0.685082 | 2_1:-9914502 | Msa0194050:CDS |
| ATTATAATCAGTGGTAACCG+GGG | 0.701620 | 2_1:+9913849 | None:intergenic |
| GGAATGATGGAAGAAGCTCA+GGG | 0.733848 | 2_1:-9915625 | None:intergenic |
| ATGATAGAAGAGACACACTG+GGG | 0.819436 | 2_1:+9914289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGTTTTTTTATTAAGT+TGG | + | chr2_1:9914407-9914426 | None:intergenic | 10.0% |
| !!! | TGATTATAATAATGAATTTT+GGG | - | chr2_1:9915539-9915558 | Msa0194050:CDS | 10.0% |
| !!! | TTATTGTTTTTTTATTAAGT+TGG | + | chr2_1:9914407-9914426 | None:intergenic | 10.0% |
| !!! | TGATTATAATAATGAATTTT+GGG | - | chr2_1:9915539-9915558 | Msa0194050:CDS | 10.0% |
| !! | AAATTCATTATTATAATCAG+TGG | + | chr2_1:9915538-9915557 | None:intergenic | 15.0% |
| !!! | CTGATTATAATAATGAATTT+TGG | - | chr2_1:9915538-9915557 | Msa0194050:CDS | 15.0% |
| !!! | GATTATAATAATGAATTTTG+GGG | - | chr2_1:9915540-9915559 | Msa0194050:CDS | 15.0% |
| !! | AAATTCATTATTATAATCAG+TGG | + | chr2_1:9915538-9915557 | None:intergenic | 15.0% |
| !!! | CTGATTATAATAATGAATTT+TGG | - | chr2_1:9915538-9915557 | Msa0194050:CDS | 15.0% |
| !!! | GATTATAATAATGAATTTTG+GGG | - | chr2_1:9915540-9915559 | Msa0194050:CDS | 15.0% |
| !!! | TTATTATGGTTAAAGTATTG+AGG | + | chr2_1:9913921-9913940 | None:intergenic | 20.0% |
| !! | TTTAATCATTCATTCCATTA+AGG | - | chr2_1:9914078-9914097 | Msa0194050:CDS | 20.0% |
| !! | AAGCAATAAAAAAACCTTAA+TGG | + | chr2_1:9914095-9914114 | None:intergenic | 20.0% |
| !!! | TTAAGCTTATGTATTTTCAT+AGG | - | chr2_1:9914211-9914230 | Msa0194050:CDS | 20.0% |
| !! | ATAAAAGAACAAAGCTTAAT+TGG | + | chr2_1:9914362-9914381 | None:intergenic | 20.0% |
| !! | AAAAATTGATACACAACTAT+GGG | - | chr2_1:9914600-9914619 | Msa0194050:CDS | 20.0% |
| !!! | TTATTATGGTTAAAGTATTG+AGG | + | chr2_1:9913921-9913940 | None:intergenic | 20.0% |
| !! | TTTAATCATTCATTCCATTA+AGG | - | chr2_1:9914078-9914097 | Msa0194050:CDS | 20.0% |
| !! | AAGCAATAAAAAAACCTTAA+TGG | + | chr2_1:9914095-9914114 | None:intergenic | 20.0% |
| !!! | TTAAGCTTATGTATTTTCAT+AGG | - | chr2_1:9914211-9914230 | Msa0194050:CDS | 20.0% |
| !! | ATAAAAGAACAAAGCTTAAT+TGG | + | chr2_1:9914362-9914381 | None:intergenic | 20.0% |
| !! | AAAAATTGATACACAACTAT+GGG | - | chr2_1:9914600-9914619 | Msa0194050:CDS | 20.0% |
| !!! | CTGATGAAAGTTTTATTGTT+TGG | - | chr2_1:9913865-9913884 | Msa0194050:CDS | 25.0% |
| ! | TGAAACTTGAGAAGTTATTA+TGG | + | chr2_1:9913935-9913954 | None:intergenic | 25.0% |
| ! | CTTTAATGTACTTCATTTCA+TGG | - | chr2_1:9913983-9914002 | Msa0194050:CDS | 25.0% |
| ! | AGCATTCAATAAACCTTAAT+GGG | + | chr2_1:9914541-9914560 | None:intergenic | 25.0% |
| ! | AAGCATTCAATAAACCTTAA+TGG | + | chr2_1:9914542-9914561 | None:intergenic | 25.0% |
| ! | GAAAAATTGATACACAACTA+TGG | - | chr2_1:9914599-9914618 | Msa0194050:CDS | 25.0% |
| ! | ATCTTATGAAGAATATCCAA+AGG | - | chr2_1:9914659-9914678 | Msa0194050:CDS | 25.0% |
| ! | ATAAAATTACAGTACTCGAA+GGG | - | chr2_1:9914856-9914875 | Msa0194050:intron | 25.0% |
| !! | TTACAAAAAGGATTGTTTCT+CGG | + | chr2_1:9915009-9915028 | None:intergenic | 25.0% |
| ! | TTATTATAATCAGTGGTAAC+CGG | + | chr2_1:9915531-9915550 | None:intergenic | 25.0% |
| !!! | CTGATGAAAGTTTTATTGTT+TGG | - | chr2_1:9913865-9913884 | Msa0194050:CDS | 25.0% |
| ! | TGAAACTTGAGAAGTTATTA+TGG | + | chr2_1:9913935-9913954 | None:intergenic | 25.0% |
| ! | CTTTAATGTACTTCATTTCA+TGG | - | chr2_1:9913983-9914002 | Msa0194050:CDS | 25.0% |
| ! | AGCATTCAATAAACCTTAAT+GGG | + | chr2_1:9914541-9914560 | None:intergenic | 25.0% |
| ! | AAGCATTCAATAAACCTTAA+TGG | + | chr2_1:9914542-9914561 | None:intergenic | 25.0% |
| ! | GAAAAATTGATACACAACTA+TGG | - | chr2_1:9914599-9914618 | Msa0194050:CDS | 25.0% |
| ! | ATCTTATGAAGAATATCCAA+AGG | - | chr2_1:9914659-9914678 | Msa0194050:CDS | 25.0% |
| ! | ATAAAATTACAGTACTCGAA+GGG | - | chr2_1:9914856-9914875 | Msa0194050:intron | 25.0% |
| !! | TTACAAAAAGGATTGTTTCT+CGG | + | chr2_1:9915009-9915028 | None:intergenic | 25.0% |
| ! | TTATTATAATCAGTGGTAAC+CGG | + | chr2_1:9915531-9915550 | None:intergenic | 25.0% |
| TCATAAGTCTTAGTGAGAAA+AGG | + | chr2_1:9913798-9913817 | None:intergenic | 30.0% | |
| TCTCACTAAGACTTATGATA+TGG | - | chr2_1:9913800-9913819 | Msa0194050:CDS | 30.0% | |
| TAAGACTTATGATATGGTTG+AGG | - | chr2_1:9913806-9913825 | Msa0194050:CDS | 30.0% | |
| ! | AACTGATGACATTGTTTCTT+GGG | - | chr2_1:9913836-9913855 | Msa0194050:CDS | 30.0% |
| GTTAGCAAAATTGATCATTG+TGG | - | chr2_1:9914148-9914167 | Msa0194050:CDS | 30.0% | |
| !!! | TTGCTTTTTATCACCCATTA+AGG | - | chr2_1:9914525-9914544 | Msa0194050:CDS | 30.0% |
| ! | TTGAACTGTCTTATGGTTTT+TGG | - | chr2_1:9914560-9914579 | Msa0194050:CDS | 30.0% |
| !!! | TTATGGTTTTTGGTTTGATC+AGG | - | chr2_1:9914570-9914589 | Msa0194050:CDS | 30.0% |
| !!! | TATGGTTTTTGGTTTGATCA+GGG | - | chr2_1:9914571-9914590 | Msa0194050:CDS | 30.0% |
| GTTTCTTGAAATTCAGAGAA+AGG | - | chr2_1:9914810-9914829 | Msa0194050:intron | 30.0% | |
| GATAAAATTACAGTACTCGA+AGG | - | chr2_1:9914855-9914874 | Msa0194050:intron | 30.0% | |
| CAAAAACTACAAAGCGAAAA+AGG | - | chr2_1:9914977-9914996 | Msa0194050:intron | 30.0% | |
| ATGCTAGCTACATTACAAAA+AGG | + | chr2_1:9915021-9915040 | None:intergenic | 30.0% | |
| GAGAAGGTTAAAAATGATCT+TGG | - | chr2_1:9915156-9915175 | Msa0194050:intron | 30.0% | |
| GAGTCATCAAAATCTACATT+CGG | + | chr2_1:9915204-9915223 | None:intergenic | 30.0% | |
| GATGACTCAATGAATTATGT+AGG | - | chr2_1:9915216-9915235 | Msa0194050:intron | 30.0% | |
| AGTTGCATACAAGATGTTAT+TGG | + | chr2_1:9915246-9915265 | None:intergenic | 30.0% | |
| TTAGGATTAACAACTACATC+CGG | + | chr2_1:9915354-9915373 | None:intergenic | 30.0% | |
| TATTATAATCAGTGGTAACC+GGG | + | chr2_1:9915530-9915549 | None:intergenic | 30.0% | |
| TCATAAGTCTTAGTGAGAAA+AGG | + | chr2_1:9913798-9913817 | None:intergenic | 30.0% | |
| TCTCACTAAGACTTATGATA+TGG | - | chr2_1:9913800-9913819 | Msa0194050:CDS | 30.0% | |
| TAAGACTTATGATATGGTTG+AGG | - | chr2_1:9913806-9913825 | Msa0194050:CDS | 30.0% | |
| ! | AACTGATGACATTGTTTCTT+GGG | - | chr2_1:9913836-9913855 | Msa0194050:CDS | 30.0% |
| GTTAGCAAAATTGATCATTG+TGG | - | chr2_1:9914148-9914167 | Msa0194050:CDS | 30.0% | |
| !!! | TTGCTTTTTATCACCCATTA+AGG | - | chr2_1:9914525-9914544 | Msa0194050:CDS | 30.0% |
| ! | TTGAACTGTCTTATGGTTTT+TGG | - | chr2_1:9914560-9914579 | Msa0194050:CDS | 30.0% |
| !!! | TTATGGTTTTTGGTTTGATC+AGG | - | chr2_1:9914570-9914589 | Msa0194050:CDS | 30.0% |
| !!! | TATGGTTTTTGGTTTGATCA+GGG | - | chr2_1:9914571-9914590 | Msa0194050:CDS | 30.0% |
| GTTTCTTGAAATTCAGAGAA+AGG | - | chr2_1:9914810-9914829 | Msa0194050:intron | 30.0% | |
| GATAAAATTACAGTACTCGA+AGG | - | chr2_1:9914855-9914874 | Msa0194050:intron | 30.0% | |
| CAAAAACTACAAAGCGAAAA+AGG | - | chr2_1:9914977-9914996 | Msa0194050:intron | 30.0% | |
| ATGCTAGCTACATTACAAAA+AGG | + | chr2_1:9915021-9915040 | None:intergenic | 30.0% | |
| GAGAAGGTTAAAAATGATCT+TGG | - | chr2_1:9915156-9915175 | Msa0194050:intron | 30.0% | |
| GAGTCATCAAAATCTACATT+CGG | + | chr2_1:9915204-9915223 | None:intergenic | 30.0% | |
| GATGACTCAATGAATTATGT+AGG | - | chr2_1:9915216-9915235 | Msa0194050:intron | 30.0% | |
| AGTTGCATACAAGATGTTAT+TGG | + | chr2_1:9915246-9915265 | None:intergenic | 30.0% | |
| TTAGGATTAACAACTACATC+CGG | + | chr2_1:9915354-9915373 | None:intergenic | 30.0% | |
| TATTATAATCAGTGGTAACC+GGG | + | chr2_1:9915530-9915549 | None:intergenic | 30.0% | |
| TAAGTCTTAGTGAGAAAAGG+AGG | + | chr2_1:9913795-9913814 | None:intergenic | 35.0% | |
| GAAACAATGTCATCAGTTGA+AGG | + | chr2_1:9913834-9913853 | None:intergenic | 35.0% | |
| ! | CAACTGATGACATTGTTTCT+TGG | - | chr2_1:9913835-9913854 | Msa0194050:CDS | 35.0% |
| ! | ACTGATGACATTGTTTCTTG+GGG | - | chr2_1:9913837-9913856 | Msa0194050:CDS | 35.0% |
| CAGCTTAATACCTATGTAAG+CGG | - | chr2_1:9913960-9913979 | Msa0194050:CDS | 35.0% | |
| TACATTAAAGCCGCTTACAT+AGG | + | chr2_1:9913973-9913992 | None:intergenic | 35.0% | |
| TGAATGCTTGAACTGTCTTA+TGG | - | chr2_1:9914553-9914572 | Msa0194050:CDS | 35.0% | |
| ! | TATAAACTGTTTTGCGCCTT+TGG | + | chr2_1:9914678-9914697 | None:intergenic | 35.0% |
| TGAAATTCAGAGAAAGGAAG+AGG | - | chr2_1:9914816-9914835 | Msa0194050:intron | 35.0% | |
| AAACTACAAAGCGAAAAAGG+AGG | - | chr2_1:9914980-9914999 | Msa0194050:intron | 35.0% | |
| AATGATAGAAGAGACACACT+GGG | + | chr2_1:9915090-9915109 | None:intergenic | 35.0% | |
| TAATGATAGAAGAGACACAC+TGG | + | chr2_1:9915091-9915110 | None:intergenic | 35.0% | |
| GTCTCTTCTATCATTAAACG+TGG | - | chr2_1:9915095-9915114 | Msa0194050:intron | 35.0% | |
| ! | CGGATGTCTTTGAAAATAAG+AGG | + | chr2_1:9915184-9915203 | None:intergenic | 35.0% |
| !! | CTTCTGGTTCAACAAAATCA+GGG | + | chr2_1:9915488-9915507 | None:intergenic | 35.0% |
| !! | TCTTCTGGTTCAACAAAATC+AGG | + | chr2_1:9915489-9915508 | None:intergenic | 35.0% |
| ATTATAATCAGTGGTAACCG+GGG | + | chr2_1:9915529-9915548 | None:intergenic | 35.0% | |
| TAAGTCTTAGTGAGAAAAGG+AGG | + | chr2_1:9913795-9913814 | None:intergenic | 35.0% | |
| GAAACAATGTCATCAGTTGA+AGG | + | chr2_1:9913834-9913853 | None:intergenic | 35.0% | |
| ! | CAACTGATGACATTGTTTCT+TGG | - | chr2_1:9913835-9913854 | Msa0194050:CDS | 35.0% |
| ! | ACTGATGACATTGTTTCTTG+GGG | - | chr2_1:9913837-9913856 | Msa0194050:CDS | 35.0% |
| CAGCTTAATACCTATGTAAG+CGG | - | chr2_1:9913960-9913979 | Msa0194050:CDS | 35.0% | |
| TACATTAAAGCCGCTTACAT+AGG | + | chr2_1:9913973-9913992 | None:intergenic | 35.0% | |
| TGAATGCTTGAACTGTCTTA+TGG | - | chr2_1:9914553-9914572 | Msa0194050:CDS | 35.0% | |
| ! | TATAAACTGTTTTGCGCCTT+TGG | + | chr2_1:9914678-9914697 | None:intergenic | 35.0% |
| TGAAATTCAGAGAAAGGAAG+AGG | - | chr2_1:9914816-9914835 | Msa0194050:intron | 35.0% | |
| AAACTACAAAGCGAAAAAGG+AGG | - | chr2_1:9914980-9914999 | Msa0194050:intron | 35.0% | |
| AATGATAGAAGAGACACACT+GGG | + | chr2_1:9915090-9915109 | None:intergenic | 35.0% | |
| TAATGATAGAAGAGACACAC+TGG | + | chr2_1:9915091-9915110 | None:intergenic | 35.0% | |
| GTCTCTTCTATCATTAAACG+TGG | - | chr2_1:9915095-9915114 | Msa0194050:intron | 35.0% | |
| ! | CGGATGTCTTTGAAAATAAG+AGG | + | chr2_1:9915184-9915203 | None:intergenic | 35.0% |
| !! | CTTCTGGTTCAACAAAATCA+GGG | + | chr2_1:9915488-9915507 | None:intergenic | 35.0% |
| !! | TCTTCTGGTTCAACAAAATC+AGG | + | chr2_1:9915489-9915508 | None:intergenic | 35.0% |
| ATTATAATCAGTGGTAACCG+GGG | + | chr2_1:9915529-9915548 | None:intergenic | 35.0% | |
| CATGAGCATTCTGCAAAGAA+TGG | + | chr2_1:9914702-9914721 | None:intergenic | 40.0% | |
| CATTCTTTGCAGAATGCTCA+TGG | - | chr2_1:9914700-9914719 | Msa0194050:CDS | 40.0% | |
| AGCATTCAATGTCTGTCGAT+CGG | + | chr2_1:9914755-9914774 | None:intergenic | 40.0% | |
| GTCATTTGGAAACAGTGGAA+AGG | - | chr2_1:9914878-9914897 | Msa0194050:intron | 40.0% | |
| CAAAGTGTGCTCTCTTATGT+TGG | - | chr2_1:9914907-9914926 | Msa0194050:intron | 40.0% | |
| AAGAAACCTGGGAATGAGTT+AGG | - | chr2_1:9914940-9914959 | Msa0194050:intron | 40.0% | |
| CATATACCTAACTCATTCCC+AGG | + | chr2_1:9914949-9914968 | None:intergenic | 40.0% | |
| ! | CGCTTTGTAGTTTTTGTCAG+CGG | + | chr2_1:9914973-9914992 | None:intergenic | 40.0% |
| ! | AGCTAGCATTGAAGATCATG+TGG | - | chr2_1:9915032-9915051 | Msa0194050:intron | 40.0% |
| ! | GCTAGCATTGAAGATCATGT+GGG | - | chr2_1:9915033-9915052 | Msa0194050:intron | 40.0% |
| ATGATAGAAGAGACACACTG+GGG | + | chr2_1:9915089-9915108 | None:intergenic | 40.0% | |
| TCGAATCATCAATGACGAGT+TGG | - | chr2_1:9915133-9915152 | Msa0194050:intron | 40.0% | |
| CGAATCATCAATGACGAGTT+GGG | - | chr2_1:9915134-9915153 | Msa0194050:intron | 40.0% | |
| AGCTCAGTTGCATCATGATT+AGG | + | chr2_1:9915372-9915391 | None:intergenic | 40.0% | |
| !! | ATTTTGGGGACAATACTTGC+AGG | - | chr2_1:9915554-9915573 | Msa0194050:CDS | 40.0% |
| ACAATACTTGCAGGACGAAT+CGG | - | chr2_1:9915563-9915582 | Msa0194050:CDS | 40.0% | |
| AATATTGGCCAACTCGACTA+GGG | + | chr2_1:9915602-9915621 | None:intergenic | 40.0% | |
| CATGAGCATTCTGCAAAGAA+TGG | + | chr2_1:9914702-9914721 | None:intergenic | 40.0% | |
| CATTCTTTGCAGAATGCTCA+TGG | - | chr2_1:9914700-9914719 | Msa0194050:CDS | 40.0% | |
| AGCATTCAATGTCTGTCGAT+CGG | + | chr2_1:9914755-9914774 | None:intergenic | 40.0% | |
| GTCATTTGGAAACAGTGGAA+AGG | - | chr2_1:9914878-9914897 | Msa0194050:intron | 40.0% | |
| CAAAGTGTGCTCTCTTATGT+TGG | - | chr2_1:9914907-9914926 | Msa0194050:intron | 40.0% | |
| AAGAAACCTGGGAATGAGTT+AGG | - | chr2_1:9914940-9914959 | Msa0194050:intron | 40.0% | |
| CATATACCTAACTCATTCCC+AGG | + | chr2_1:9914949-9914968 | None:intergenic | 40.0% | |
| ! | CGCTTTGTAGTTTTTGTCAG+CGG | + | chr2_1:9914973-9914992 | None:intergenic | 40.0% |
| ! | AGCTAGCATTGAAGATCATG+TGG | - | chr2_1:9915032-9915051 | Msa0194050:intron | 40.0% |
| ! | GCTAGCATTGAAGATCATGT+GGG | - | chr2_1:9915033-9915052 | Msa0194050:intron | 40.0% |
| ATGATAGAAGAGACACACTG+GGG | + | chr2_1:9915089-9915108 | None:intergenic | 40.0% | |
| TCGAATCATCAATGACGAGT+TGG | - | chr2_1:9915133-9915152 | Msa0194050:intron | 40.0% | |
| CGAATCATCAATGACGAGTT+GGG | - | chr2_1:9915134-9915153 | Msa0194050:intron | 40.0% | |
| AGCTCAGTTGCATCATGATT+AGG | + | chr2_1:9915372-9915391 | None:intergenic | 40.0% | |
| !! | ATTTTGGGGACAATACTTGC+AGG | - | chr2_1:9915554-9915573 | Msa0194050:CDS | 40.0% |
| ACAATACTTGCAGGACGAAT+CGG | - | chr2_1:9915563-9915582 | Msa0194050:CDS | 40.0% | |
| AATATTGGCCAACTCGACTA+GGG | + | chr2_1:9915602-9915621 | None:intergenic | 40.0% | |
| TCAGGGTAGTAGTTCCGATA+AGG | - | chr2_1:9913767-9913786 | Msa0194050:CDS | 45.0% | |
| !! | GAGAAAAGGAGGCACCTTAT+CGG | + | chr2_1:9913784-9913803 | None:intergenic | 45.0% |
| TGTCGATCGGATTCTGCTAA+TGG | + | chr2_1:9914742-9914761 | None:intergenic | 45.0% | |
| ACAGTACTCGAAGGGTCATT+TGG | - | chr2_1:9914864-9914883 | Msa0194050:intron | 45.0% | |
| GAAGGGTCATTTGGAAACAG+TGG | - | chr2_1:9914873-9914892 | Msa0194050:intron | 45.0% | |
| !! | GTCAAGTGCTGAAGAAACCT+GGG | - | chr2_1:9914929-9914948 | Msa0194050:intron | 45.0% |
| ! | ATCAATGACGAGTTGGGAGA+AGG | - | chr2_1:9915140-9915159 | Msa0194050:intron | 45.0% |
| TAGATGTTGAAGTTCAGCCC+AGG | - | chr2_1:9915265-9915284 | Msa0194050:intron | 45.0% | |
| !! | ATGGAGTTCATGTCGACTTC+TGG | + | chr2_1:9915294-9915313 | None:intergenic | 45.0% |
| TGGCTCAACTGCAACAAGAT+CGG | + | chr2_1:9915451-9915470 | None:intergenic | 45.0% | |
| !! | GTTACGACGGATTGTTCTTC+TGG | + | chr2_1:9915504-9915523 | None:intergenic | 45.0% |
| GAAGATATCCCTAGTCGAGT+TGG | - | chr2_1:9915591-9915610 | Msa0194050:CDS | 45.0% | |
| CAATATTGGCCAACTCGACT+AGG | + | chr2_1:9915603-9915622 | None:intergenic | 45.0% | |
| !! | CTAGTCGAGTTGGCCAATAT+TGG | - | chr2_1:9915601-9915620 | Msa0194050:CDS | 45.0% |
| ! | CTCTTTTGGTCCGCCAATAT+TGG | + | chr2_1:9915617-9915636 | None:intergenic | 45.0% |
| TCAGGGTAGTAGTTCCGATA+AGG | - | chr2_1:9913767-9913786 | Msa0194050:CDS | 45.0% | |
| !! | GAGAAAAGGAGGCACCTTAT+CGG | + | chr2_1:9913784-9913803 | None:intergenic | 45.0% |
| TGTCGATCGGATTCTGCTAA+TGG | + | chr2_1:9914742-9914761 | None:intergenic | 45.0% | |
| ACAGTACTCGAAGGGTCATT+TGG | - | chr2_1:9914864-9914883 | Msa0194050:intron | 45.0% | |
| GAAGGGTCATTTGGAAACAG+TGG | - | chr2_1:9914873-9914892 | Msa0194050:intron | 45.0% | |
| !! | GTCAAGTGCTGAAGAAACCT+GGG | - | chr2_1:9914929-9914948 | Msa0194050:intron | 45.0% |
| ! | ATCAATGACGAGTTGGGAGA+AGG | - | chr2_1:9915140-9915159 | Msa0194050:intron | 45.0% |
| TAGATGTTGAAGTTCAGCCC+AGG | - | chr2_1:9915265-9915284 | Msa0194050:intron | 45.0% | |
| !! | ATGGAGTTCATGTCGACTTC+TGG | + | chr2_1:9915294-9915313 | None:intergenic | 45.0% |
| TGGCTCAACTGCAACAAGAT+CGG | + | chr2_1:9915451-9915470 | None:intergenic | 45.0% | |
| !! | GTTACGACGGATTGTTCTTC+TGG | + | chr2_1:9915504-9915523 | None:intergenic | 45.0% |
| GAAGATATCCCTAGTCGAGT+TGG | - | chr2_1:9915591-9915610 | Msa0194050:CDS | 45.0% | |
| CAATATTGGCCAACTCGACT+AGG | + | chr2_1:9915603-9915622 | None:intergenic | 45.0% | |
| !! | CTAGTCGAGTTGGCCAATAT+TGG | - | chr2_1:9915601-9915620 | Msa0194050:CDS | 45.0% |
| ! | CTCTTTTGGTCCGCCAATAT+TGG | + | chr2_1:9915617-9915636 | None:intergenic | 45.0% |
| TTGCAGAATGCTCATGGCCA+AGG | - | chr2_1:9914706-9914725 | Msa0194050:CDS | 50.0% | |
| TGCAGAATGCTCATGGCCAA+GGG | - | chr2_1:9914707-9914726 | Msa0194050:CDS | 50.0% | |
| !! | GGTCAAGTGCTGAAGAAACC+TGG | - | chr2_1:9914928-9914947 | Msa0194050:intron | 50.0% |
| !! | ATGTCGACTTCTGGTGACCT+GGG | + | chr2_1:9915285-9915304 | None:intergenic | 50.0% |
| AGGAACAACTACCACTGGCA+TGG | + | chr2_1:9915313-9915332 | None:intergenic | 50.0% | |
| GGATCAGGAACAACTACCAC+TGG | + | chr2_1:9915318-9915337 | None:intergenic | 50.0% | |
| TGATCCAGTTGCAACTGAGC+CGG | - | chr2_1:9915332-9915351 | Msa0194050:intron | 50.0% | |
| GGCTCAGTTGCAACTGGATT+AGG | + | chr2_1:9915411-9915430 | None:intergenic | 50.0% | |
| !! | TCGGAAGCATCGATTACTGC+TGG | + | chr2_1:9915432-9915451 | None:intergenic | 50.0% |
| TCAGGGACAACTGCAACAGT+TGG | + | chr2_1:9915471-9915490 | None:intergenic | 50.0% | |
| !! | GTCGAGTTGGCCAATATTGG+CGG | - | chr2_1:9915604-9915623 | Msa0194050:CDS | 50.0% |
| TTGCAGAATGCTCATGGCCA+AGG | - | chr2_1:9914706-9914725 | Msa0194050:CDS | 50.0% | |
| TGCAGAATGCTCATGGCCAA+GGG | - | chr2_1:9914707-9914726 | Msa0194050:CDS | 50.0% | |
| !! | GGTCAAGTGCTGAAGAAACC+TGG | - | chr2_1:9914928-9914947 | Msa0194050:intron | 50.0% |
| !! | ATGTCGACTTCTGGTGACCT+GGG | + | chr2_1:9915285-9915304 | None:intergenic | 50.0% |
| AGGAACAACTACCACTGGCA+TGG | + | chr2_1:9915313-9915332 | None:intergenic | 50.0% | |
| GGATCAGGAACAACTACCAC+TGG | + | chr2_1:9915318-9915337 | None:intergenic | 50.0% | |
| TGATCCAGTTGCAACTGAGC+CGG | - | chr2_1:9915332-9915351 | Msa0194050:intron | 50.0% | |
| GGCTCAGTTGCAACTGGATT+AGG | + | chr2_1:9915411-9915430 | None:intergenic | 50.0% | |
| !! | TCGGAAGCATCGATTACTGC+TGG | + | chr2_1:9915432-9915451 | None:intergenic | 50.0% |
| TCAGGGACAACTGCAACAGT+TGG | + | chr2_1:9915471-9915490 | None:intergenic | 50.0% | |
| !! | GTCGAGTTGGCCAATATTGG+CGG | - | chr2_1:9915604-9915623 | Msa0194050:CDS | 50.0% |
| GCAGAATGCTCATGGCCAAG+GGG | - | chr2_1:9914708-9914727 | Msa0194050:CDS | 55.0% | |
| CTAATGGAGCAGCAACCCCT+TGG | + | chr2_1:9914726-9914745 | None:intergenic | 55.0% | |
| !! | CATGTCGACTTCTGGTGACC+TGG | + | chr2_1:9915286-9915305 | None:intergenic | 55.0% |
| CGACATGAACTCCATGCCAG+TGG | - | chr2_1:9915299-9915318 | Msa0194050:intron | 55.0% | |
| GGCTCAGTTGCAACTGGATC+AGG | + | chr2_1:9915333-9915352 | None:intergenic | 55.0% | |
| ACATCCGGCTCAGTTGCAAC+TGG | + | chr2_1:9915339-9915358 | None:intergenic | 55.0% | |
| !! | ACTGCTGGCTCAGTTGCAAC+TGG | + | chr2_1:9915417-9915436 | None:intergenic | 55.0% |
| ACAATCCGTCGTAACGTCCC+CGG | - | chr2_1:9915509-9915528 | Msa0194050:CDS | 55.0% | |
| GCAGAATGCTCATGGCCAAG+GGG | - | chr2_1:9914708-9914727 | Msa0194050:CDS | 55.0% | |
| CTAATGGAGCAGCAACCCCT+TGG | + | chr2_1:9914726-9914745 | None:intergenic | 55.0% | |
| !! | CATGTCGACTTCTGGTGACC+TGG | + | chr2_1:9915286-9915305 | None:intergenic | 55.0% |
| CGACATGAACTCCATGCCAG+TGG | - | chr2_1:9915299-9915318 | Msa0194050:intron | 55.0% | |
| GGCTCAGTTGCAACTGGATC+AGG | + | chr2_1:9915333-9915352 | None:intergenic | 55.0% | |
| ACATCCGGCTCAGTTGCAAC+TGG | + | chr2_1:9915339-9915358 | None:intergenic | 55.0% | |
| !! | ACTGCTGGCTCAGTTGCAAC+TGG | + | chr2_1:9915417-9915436 | None:intergenic | 55.0% |
| ACAATCCGTCGTAACGTCCC+CGG | - | chr2_1:9915509-9915528 | Msa0194050:CDS | 55.0% | |
| GGTAACCGGGGACGTTACGA+CGG | + | chr2_1:9915517-9915536 | None:intergenic | 60.0% | |
| GGTAACCGGGGACGTTACGA+CGG | + | chr2_1:9915517-9915536 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 9913756 | 9915641 | 9913756 | ID=Msa0194050;Name=Msa0194050 |
| chr2_1 | mRNA | 9913756 | 9915641 | 9913756 | ID=Msa0194050-mRNA-1;Parent=Msa0194050;Name=Msa0194050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|427 |
| chr2_1 | exon | 9915408 | 9915641 | 9915408 | ID=Msa0194050-mRNA-1:exon:4520;Parent=Msa0194050-mRNA-1 |
| chr2_1 | exon | 9913756 | 9914805 | 9913756 | ID=Msa0194050-mRNA-1:exon:4519;Parent=Msa0194050-mRNA-1 |
| chr2_1 | CDS | 9915408 | 9915641 | 9915408 | ID=Msa0194050-mRNA-1:cds;Parent=Msa0194050-mRNA-1 |
| chr2_1 | CDS | 9913756 | 9914805 | 9913756 | ID=Msa0194050-mRNA-1:cds;Parent=Msa0194050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
