Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196640 | XP_013462829.1 | 75.728 | 206 | 41 | 3 | 157 | 358 | 31 | 231 | 3.41e-90 | 281 |
| Msa0196640 | XP_013462829.1 | 84.672 | 137 | 16 | 1 | 26 | 162 | 69 | 200 | 3.57e-74 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196640 | sp|Q9ZVL3|NFYC3_ARATH | 48.193 | 166 | 77 | 3 | 192 | 356 | 51 | 208 | 8.79e-45 | 156 |
| Msa0196640 | sp|Q9ZVL3|NFYC3_ARATH | 59.836 | 122 | 46 | 2 | 28 | 148 | 56 | 175 | 2.72e-39 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196640 | I3TAY7 | 75.728 | 206 | 41 | 3 | 157 | 358 | 31 | 231 | 1.63e-90 | 281 |
| Msa0196640 | I3TAY7 | 84.672 | 137 | 16 | 1 | 26 | 162 | 69 | 200 | 1.70e-74 | 240 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0196640 | TF | NF-YC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196640 | MtrunA17_Chr2g0288481 | 75.728 | 206 | 41 | 3 | 157 | 358 | 31 | 231 | 3.14e-94 | 281 |
| Msa0196640 | MtrunA17_Chr2g0288481 | 84.672 | 137 | 16 | 1 | 26 | 162 | 69 | 200 | 3.28e-78 | 240 |
| Msa0196640 | MtrunA17_Chr7g0272991 | 47.727 | 176 | 82 | 5 | 192 | 360 | 82 | 254 | 8.81e-51 | 170 |
| Msa0196640 | MtrunA17_Chr7g0272991 | 44.886 | 176 | 85 | 4 | 28 | 200 | 87 | 253 | 1.26e-42 | 149 |
| Msa0196640 | MtrunA17_Chr8g0376351 | 88.372 | 86 | 9 | 1 | 60 | 144 | 1 | 86 | 1.36e-46 | 153 |
| Msa0196640 | MtrunA17_Chr8g0376351 | 90.244 | 82 | 8 | 0 | 229 | 310 | 1 | 82 | 1.96e-46 | 153 |
| Msa0196640 | MtrunA17_Chr1g0191681 | 59.167 | 120 | 47 | 2 | 192 | 311 | 82 | 199 | 1.63e-45 | 156 |
| Msa0196640 | MtrunA17_Chr1g0191681 | 57.252 | 131 | 53 | 3 | 26 | 156 | 85 | 212 | 9.89e-44 | 152 |
| Msa0196640 | MtrunA17_Chr2g0310741 | 49.367 | 158 | 75 | 2 | 193 | 347 | 85 | 240 | 4.66e-45 | 155 |
| Msa0196640 | MtrunA17_Chr2g0310741 | 51.034 | 145 | 59 | 3 | 24 | 164 | 85 | 221 | 1.35e-41 | 146 |
| Msa0196640 | MtrunA17_Chr3g0132191 | 65.657 | 99 | 34 | 0 | 193 | 291 | 37 | 135 | 2.21e-41 | 144 |
| Msa0196640 | MtrunA17_Chr3g0132191 | 57.025 | 121 | 48 | 1 | 28 | 148 | 41 | 157 | 1.10e-38 | 137 |
| Msa0196640 | MtrunA17_Chr2g0318881 | 51.648 | 91 | 43 | 1 | 210 | 299 | 21 | 111 | 1.28e-22 | 91.7 |
| Msa0196640 | MtrunA17_Chr2g0318881 | 50.549 | 91 | 44 | 1 | 41 | 130 | 21 | 111 | 6.05e-22 | 89.7 |
| Msa0196640 | MtrunA17_Chr2g0318921 | 58.228 | 79 | 32 | 1 | 210 | 287 | 21 | 99 | 1.68e-22 | 91.3 |
| Msa0196640 | MtrunA17_Chr2g0318921 | 56.962 | 79 | 33 | 1 | 41 | 118 | 21 | 99 | 7.94e-22 | 89.4 |
| Msa0196640 | MtrunA17_Chr3g0081161 | 42.308 | 78 | 45 | 0 | 43 | 120 | 9 | 86 | 1.92e-11 | 64.3 |
| Msa0196640 | MtrunA17_Chr3g0081161 | 42.308 | 78 | 45 | 0 | 212 | 289 | 9 | 86 | 1.92e-11 | 64.3 |
| Msa0196640 | MtrunA17_Chr8g0354151 | 39.744 | 78 | 47 | 0 | 43 | 120 | 9 | 86 | 6.90e-11 | 62.8 |
| Msa0196640 | MtrunA17_Chr8g0354151 | 39.744 | 78 | 47 | 0 | 212 | 289 | 9 | 86 | 6.90e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196640 | AT1G54830.2 | 48.193 | 166 | 77 | 3 | 192 | 356 | 51 | 208 | 8.93e-46 | 156 |
| Msa0196640 | AT1G54830.2 | 59.836 | 122 | 46 | 2 | 28 | 148 | 56 | 175 | 2.77e-40 | 142 |
| Msa0196640 | AT1G54830.3 | 48.193 | 166 | 77 | 3 | 192 | 356 | 51 | 208 | 8.93e-46 | 156 |
| Msa0196640 | AT1G54830.3 | 59.836 | 122 | 46 | 2 | 28 | 148 | 56 | 175 | 2.77e-40 | 142 |
| Msa0196640 | AT1G54830.1 | 48.193 | 166 | 77 | 3 | 192 | 356 | 51 | 208 | 8.93e-46 | 156 |
| Msa0196640 | AT1G54830.1 | 59.836 | 122 | 46 | 2 | 28 | 148 | 56 | 175 | 2.77e-40 | 142 |
| Msa0196640 | AT1G08970.3 | 52.096 | 167 | 65 | 6 | 193 | 353 | 62 | 219 | 4.69e-45 | 154 |
| Msa0196640 | AT1G08970.3 | 61.864 | 118 | 38 | 2 | 27 | 144 | 65 | 175 | 2.62e-40 | 142 |
| Msa0196640 | AT1G08970.4 | 52.096 | 167 | 65 | 6 | 193 | 353 | 62 | 219 | 4.69e-45 | 154 |
| Msa0196640 | AT1G08970.4 | 61.864 | 118 | 38 | 2 | 27 | 144 | 65 | 175 | 2.62e-40 | 142 |
| Msa0196640 | AT1G08970.2 | 52.096 | 167 | 65 | 6 | 193 | 353 | 62 | 219 | 4.69e-45 | 154 |
| Msa0196640 | AT1G08970.2 | 61.864 | 118 | 38 | 2 | 27 | 144 | 65 | 175 | 2.62e-40 | 142 |
| Msa0196640 | AT1G08970.1 | 52.096 | 167 | 65 | 6 | 193 | 353 | 62 | 219 | 4.69e-45 | 154 |
| Msa0196640 | AT1G08970.1 | 61.864 | 118 | 38 | 2 | 27 | 144 | 65 | 175 | 2.62e-40 | 142 |
| Msa0196640 | AT1G56170.1 | 51.389 | 144 | 62 | 1 | 190 | 333 | 55 | 190 | 1.30e-44 | 152 |
| Msa0196640 | AT1G56170.1 | 56.911 | 123 | 48 | 3 | 26 | 146 | 60 | 179 | 2.83e-40 | 141 |
| Msa0196640 | AT1G56170.2 | 51.389 | 144 | 62 | 1 | 190 | 333 | 55 | 190 | 1.30e-44 | 152 |
| Msa0196640 | AT1G56170.2 | 56.911 | 123 | 48 | 3 | 26 | 146 | 60 | 179 | 2.83e-40 | 141 |
| Msa0196640 | AT5G63470.2 | 49.068 | 161 | 69 | 2 | 193 | 345 | 60 | 215 | 3.75e-42 | 147 |
| Msa0196640 | AT5G63470.2 | 57.258 | 124 | 50 | 1 | 28 | 148 | 64 | 187 | 5.80e-40 | 142 |
| Msa0196640 | AT5G63470.1 | 49.068 | 161 | 69 | 2 | 193 | 345 | 60 | 215 | 3.75e-42 | 147 |
| Msa0196640 | AT5G63470.1 | 57.258 | 124 | 50 | 1 | 28 | 148 | 64 | 187 | 5.80e-40 | 142 |
| Msa0196640 | AT3G48590.1 | 57.025 | 121 | 47 | 1 | 193 | 308 | 47 | 167 | 5.30e-42 | 147 |
| Msa0196640 | AT3G48590.1 | 57.025 | 121 | 52 | 0 | 28 | 148 | 51 | 171 | 4.46e-41 | 144 |
| Msa0196640 | AT5G50480.1 | 45.946 | 148 | 68 | 3 | 189 | 327 | 35 | 179 | 2.89e-35 | 128 |
| Msa0196640 | AT5G50480.1 | 51.639 | 122 | 53 | 3 | 30 | 148 | 42 | 160 | 3.10e-34 | 125 |
| Msa0196640 | AT5G27910.1 | 53.061 | 98 | 43 | 1 | 188 | 285 | 16 | 110 | 4.50e-29 | 111 |
| Msa0196640 | AT5G27910.1 | 58.750 | 80 | 33 | 0 | 37 | 116 | 31 | 110 | 5.98e-26 | 103 |
| Msa0196640 | AT5G50490.1 | 42.857 | 112 | 61 | 1 | 180 | 291 | 8 | 116 | 3.15e-25 | 101 |
| Msa0196640 | AT5G50490.1 | 50.000 | 84 | 42 | 0 | 39 | 122 | 33 | 116 | 3.06e-22 | 93.2 |
| Msa0196640 | AT5G50470.1 | 43.966 | 116 | 59 | 1 | 37 | 146 | 58 | 173 | 4.55e-23 | 96.3 |
| Msa0196640 | AT5G50470.1 | 37.500 | 144 | 80 | 3 | 189 | 325 | 44 | 184 | 8.53e-23 | 95.5 |
| Msa0196640 | AT5G38140.1 | 39.806 | 103 | 60 | 1 | 186 | 288 | 44 | 144 | 6.96e-21 | 89.7 |
| Msa0196640 | AT5G38140.1 | 45.455 | 77 | 42 | 0 | 43 | 119 | 68 | 144 | 1.60e-18 | 83.2 |
Find 76 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTTAATCCTTGTTAA+AGG | 0.176954 | 2_1:+13998092 | None:intergenic |
| ATTGGGACACTTTCTCTTCT+TGG | 0.187927 | 2_1:+13997825 | None:intergenic |
| ATTGGGACACCTTCTCTTCT+TGG | 0.200965 | 2_1:+13996801 | None:intergenic |
| AATGGAGCGTGACATATTTA+TGG | 0.230451 | 2_1:-13996829 | Msa0196640:CDS |
| AATGGAGCGTGACATATTTA+TGG | 0.230451 | 2_1:-13997853 | Msa0196640:CDS |
| TTTCTTGCTTTCTTTGGGTT+TGG | 0.260736 | 2_1:+13996645 | None:intergenic |
| GGCATGTGAAATGTTTATTA+TGG | 0.268895 | 2_1:-13996985 | Msa0196640:CDS |
| GGCATGTGAAATGTTTATTA+TGG | 0.268895 | 2_1:-13998009 | Msa0196640:CDS |
| TGCCTCCACACGGATGCTTA+TGG | 0.278314 | 2_1:-13996736 | Msa0196640:CDS |
| ATCGATGATTTCAAAACTAA+TGG | 0.318284 | 2_1:-13998119 | Msa0196640:CDS |
| TAATAAGGAACATTTCCTAT+TGG | 0.333389 | 2_1:+13997807 | None:intergenic |
| GTTCTTGTTGTTTCTGTTGC+CGG | 0.334605 | 2_1:+13998194 | None:intergenic |
| GCCTCCACACGGATGCTTAT+GGG | 0.341965 | 2_1:-13996735 | Msa0196640:CDS |
| GTTGCCGGTGAGAGAATTCT+TGG | 0.343143 | 2_1:+13998209 | None:intergenic |
| AAGGAACATATATTCCCTAT+TGG | 0.345891 | 2_1:+13996783 | None:intergenic |
| AATAAGGAACATTTCCTATT+GGG | 0.368793 | 2_1:+13997808 | None:intergenic |
| ATCTTCTTAATCCTTGCTAA+TGG | 0.378288 | 2_1:+13997068 | None:intergenic |
| GGAAACATTGGATTAGCAAA+AGG | 0.383920 | 2_1:+13996666 | None:intergenic |
| AGAAGAGAAGGTGTCCCAAT+AGG | 0.387819 | 2_1:-13996798 | Msa0196640:CDS |
| TTCTTTGGGTTTGGAAACAT+TGG | 0.395372 | 2_1:+13996654 | None:intergenic |
| GCCGGCATAGGCACATAATA+AGG | 0.398907 | 2_1:+13996764 | None:intergenic |
| GCCGGCATAGGCACATAATA+AGG | 0.398907 | 2_1:+13997792 | None:intergenic |
| ACTGTTGATTTCAAAAGTAA+TGG | 0.437192 | 2_1:-13997095 | Msa0196640:CDS |
| AGGAACATATATTCCCTATT+GGG | 0.437588 | 2_1:+13996784 | None:intergenic |
| ATGGAGCGTGACATATTTAT+GGG | 0.438860 | 2_1:-13996828 | Msa0196640:CDS |
| ATGGAGCGTGACATATTTAT+GGG | 0.438860 | 2_1:-13997852 | Msa0196640:CDS |
| GAAACATTGGATTAGCAAAA+GGG | 0.448257 | 2_1:+13996667 | None:intergenic |
| GAAGAGAAGGTGTCCCAATA+GGG | 0.451739 | 2_1:-13996797 | Msa0196640:CDS |
| AGAAGAGAAAGTGTCCCAAT+AGG | 0.459132 | 2_1:-13997822 | Msa0196640:CDS |
| TCCTTATTATGTGCCTATGC+CGG | 0.483112 | 2_1:-13996765 | Msa0196640:CDS |
| TCCTTATTATGTGCCTATGC+CGG | 0.483112 | 2_1:-13997793 | Msa0196640:CDS |
| CATGCCTTAGCAAACAGAAT+AGG | 0.486382 | 2_1:+13997002 | None:intergenic |
| CATGCCTTAGCAAACAGAAT+AGG | 0.486382 | 2_1:+13998026 | None:intergenic |
| CCTAGTTGATATTGTCCCTA+GGG | 0.487741 | 2_1:-13996859 | Msa0196640:CDS |
| CCTAGTTGATATTGTCCCTA+GGG | 0.487741 | 2_1:-13997883 | Msa0196640:CDS |
| CTCTACTCAAGTAGGATGAA+AGG | 0.497261 | 2_1:+13997216 | None:intergenic |
| TGGAGCTAGCAACAAGGTCA+TGG | 0.501489 | 2_1:-13996965 | Msa0196640:CDS |
| TGGAGCTAGCAACAAGGTCA+TGG | 0.501489 | 2_1:-13997989 | Msa0196640:CDS |
| TCAACCAACGTAATTACAAC+GGG | 0.501937 | 2_1:-13996701 | Msa0196640:CDS |
| TCTACTCAAGTAGGATGAAA+GGG | 0.502919 | 2_1:+13997217 | None:intergenic |
| AAGATCATGAAAACAGAAGA+AGG | 0.505724 | 2_1:-13997050 | Msa0196640:CDS |
| CCCTAGGGACAATATCAACT+AGG | 0.511793 | 2_1:+13996859 | None:intergenic |
| CCCTAGGGACAATATCAACT+AGG | 0.511793 | 2_1:+13997883 | None:intergenic |
| GAGTTGAACTCTACTCAAGT+AGG | 0.528625 | 2_1:+13997208 | None:intergenic |
| GGCACCTATTCTGTTTGCTA+AGG | 0.530640 | 2_1:-13997006 | Msa0196640:CDS |
| GGCACCTATTCTGTTTGCTA+AGG | 0.530640 | 2_1:-13998030 | Msa0196640:CDS |
| CCGTGTGGAGGCATATGAGC+CGG | 0.534035 | 2_1:+13996746 | None:intergenic |
| TACTGAGGTGGCATATGAGC+CGG | 0.534480 | 2_1:+13997774 | None:intergenic |
| CTAATGGCTTACCTTTAACA+AGG | 0.540251 | 2_1:-13998103 | Msa0196640:CDS |
| ATGCCACCTCAGTATGATGC+AGG | 0.555708 | 2_1:-13997765 | Msa0196640:intron |
| TCCTAGTTGATATTGTCCCT+AGG | 0.558927 | 2_1:-13996860 | Msa0196640:CDS |
| TCCTAGTTGATATTGTCCCT+AGG | 0.558927 | 2_1:-13997884 | Msa0196640:CDS |
| TCCCATAAGCATCCGTGTGG+AGG | 0.573460 | 2_1:+13996734 | None:intergenic |
| AAGATCATGAAAGCAGAGGA+AGG | 0.574009 | 2_1:-13998074 | Msa0196640:CDS |
| GGTGGCATATGAGCCGGCAT+AGG | 0.576392 | 2_1:+13997780 | None:intergenic |
| GGAGGCATATGAGCCGGCAT+AGG | 0.579113 | 2_1:+13996752 | None:intergenic |
| GGAGCTAGCAACAAGGTCAT+GGG | 0.582315 | 2_1:-13996964 | Msa0196640:CDS |
| GGAGCTAGCAACAAGGTCAT+GGG | 0.582315 | 2_1:-13997988 | Msa0196640:CDS |
| AACTCCAAGAATTCTCTCAC+CGG | 0.591510 | 2_1:-13998213 | Msa0196640:CDS |
| GTAATGGCTTGCCATTAGCA+AGG | 0.597965 | 2_1:-13997079 | Msa0196640:CDS |
| GCTGCCCGTTGTAATTACGT+TGG | 0.611424 | 2_1:+13996697 | None:intergenic |
| ATGGGTATACCAAGAAGAGA+AGG | 0.611937 | 2_1:-13996810 | Msa0196640:CDS |
| CTCAACCAACGTAATTACAA+CGG | 0.619206 | 2_1:-13996702 | Msa0196640:CDS |
| TAAGAAGATCATGAAAGCAG+AGG | 0.623782 | 2_1:-13998078 | Msa0196640:CDS |
| AAGGTCATGGGCTAATACAG+AGG | 0.637560 | 2_1:-13996952 | Msa0196640:CDS |
| AAGGTCATGGGCTAATACAG+AGG | 0.637560 | 2_1:-13997976 | Msa0196640:CDS |
| ATTGGATTAGCAAAAGGGTG+TGG | 0.642492 | 2_1:+13996672 | None:intergenic |
| CCGGCTCATATGCCTCCACA+CGG | 0.643904 | 2_1:-13996746 | Msa0196640:CDS |
| GGATTAGCAAAAGGGTGTGG+TGG | 0.678099 | 2_1:+13996675 | None:intergenic |
| AGTGAGTATGATATCAGCTG+AGG | 0.690629 | 2_1:-13997027 | Msa0196640:CDS |
| AGTGAGTATGATATCAGCTG+AGG | 0.690629 | 2_1:-13998051 | Msa0196640:CDS |
| TTATTATGGAGCTAGCAACA+AGG | 0.697305 | 2_1:-13996971 | Msa0196640:CDS |
| TTATTATGGAGCTAGCAACA+AGG | 0.697305 | 2_1:-13997995 | Msa0196640:CDS |
| GGACCTGCATCATACTGAGG+TGG | 0.712395 | 2_1:+13997762 | None:intergenic |
| TCTTCCCATAAGCATCCGTG+TGG | 0.713204 | 2_1:+13996731 | None:intergenic |
| GATGGACCTGCATCATACTG+AGG | 0.765521 | 2_1:+13997759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCAAAATCAACATAA+TGG | + | chr2_1:13997340-13997359 | None:intergenic | 15.0% |
| !! | AAGAAAATTAAATTATTGCA+AGG | + | chr2_1:13997508-13997527 | None:intergenic | 15.0% |
| !!! | ATTTTTCAAAATCAACATAA+TGG | + | chr2_1:13997340-13997359 | None:intergenic | 15.0% |
| !! | AAGAAAATTAAATTATTGCA+AGG | + | chr2_1:13997508-13997527 | None:intergenic | 15.0% |
| !! | CATAGTTTAAACAATTCAAT+CGG | + | chr2_1:13997428-13997447 | None:intergenic | 20.0% |
| !!! | TATAGAAATGTTTTGAAAAG+AGG | + | chr2_1:13997473-13997492 | None:intergenic | 20.0% |
| !!! | TTTGATACATATTGTTGTTA+TGG | + | chr2_1:13997596-13997615 | None:intergenic | 20.0% |
| !!! | CTATTTAGTTTGATTGATTT+TGG | + | chr2_1:13997677-13997696 | None:intergenic | 20.0% |
| !! | CATAGTTTAAACAATTCAAT+CGG | + | chr2_1:13997428-13997447 | None:intergenic | 20.0% |
| !!! | TATAGAAATGTTTTGAAAAG+AGG | + | chr2_1:13997473-13997492 | None:intergenic | 20.0% |
| !!! | TTTGATACATATTGTTGTTA+TGG | + | chr2_1:13997596-13997615 | None:intergenic | 20.0% |
| !!! | CTATTTAGTTTGATTGATTT+TGG | + | chr2_1:13997677-13997696 | None:intergenic | 20.0% |
| !!! | CTATTTGGTTTAATTGGTTT+TGG | + | chr2_1:13996654-13996673 | None:intergenic | 25.0% |
| ! | ATCGATGATTTCAAAACTAA+TGG | - | chr2_1:13996837-13996856 | Msa0196640:CDS | 25.0% |
| ! | ATCTTCTTAATCCTTGTTAA+AGG | + | chr2_1:13996867-13996886 | None:intergenic | 25.0% |
| ! | AATAAGGAACATTTCCTATT+GGG | + | chr2_1:13997151-13997170 | None:intergenic | 25.0% |
| ! | TAATAAGGAACATTTCCTAT+TGG | + | chr2_1:13997152-13997171 | None:intergenic | 25.0% |
| ! | GAATTGTTTAAACTATGACT+TGG | - | chr2_1:13997431-13997450 | Msa0196640:intron | 25.0% |
| !!! | ATTCTTGTTGTTTTTGTTGT+CGG | + | chr2_1:13997788-13997807 | None:intergenic | 25.0% |
| !!! | ACTGTTGATTTCAAAAGTAA+TGG | - | chr2_1:13997861-13997880 | Msa0196640:CDS | 25.0% |
| !!! | CTATTTGGTTTAATTGGTTT+TGG | + | chr2_1:13996654-13996673 | None:intergenic | 25.0% |
| ! | ATCGATGATTTCAAAACTAA+TGG | - | chr2_1:13996837-13996856 | Msa0196640:CDS | 25.0% |
| ! | ATCTTCTTAATCCTTGTTAA+AGG | + | chr2_1:13996867-13996886 | None:intergenic | 25.0% |
| ! | AATAAGGAACATTTCCTATT+GGG | + | chr2_1:13997151-13997170 | None:intergenic | 25.0% |
| ! | TAATAAGGAACATTTCCTAT+TGG | + | chr2_1:13997152-13997171 | None:intergenic | 25.0% |
| ! | GAATTGTTTAAACTATGACT+TGG | - | chr2_1:13997431-13997450 | Msa0196640:intron | 25.0% |
| !!! | ATTCTTGTTGTTTTTGTTGT+CGG | + | chr2_1:13997788-13997807 | None:intergenic | 25.0% |
| !!! | ACTGTTGATTTCAAAAGTAA+TGG | - | chr2_1:13997861-13997880 | Msa0196640:CDS | 25.0% |
| ! | GTGACACTATTTGGTTTAAT+TGG | + | chr2_1:13996660-13996679 | None:intergenic | 30.0% |
| ! | AGAAAAAACTTGGCATCTTT+TGG | - | chr2_1:13996788-13996807 | Msa0196640:CDS | 30.0% |
| ! | GAAAAAACTTGGCATCTTTT+GGG | - | chr2_1:13996789-13996808 | Msa0196640:CDS | 30.0% |
| GGCATGTGAAATGTTTATTA+TGG | - | chr2_1:13996947-13996966 | Msa0196640:CDS | 30.0% | |
| !! | GAAACATTTGATTTGCAAGA+GGG | + | chr2_1:13997295-13997314 | None:intergenic | 30.0% |
| TATGTATCAAAACACACAAG+AGG | - | chr2_1:13997605-13997624 | Msa0196640:intron | 30.0% | |
| !!! | TTCATTTTGTTTTGACCAGA+AGG | + | chr2_1:13997829-13997848 | None:intergenic | 30.0% |
| ATCTTCTTAATCCTTGCTAA+TGG | + | chr2_1:13997891-13997910 | None:intergenic | 30.0% | |
| AAGATCATGAAAACAGAAGA+AGG | - | chr2_1:13997906-13997925 | Msa0196640:CDS | 30.0% | |
| GGCATGTGAAATGTTTATTA+TGG | - | chr2_1:13996947-13996966 | Msa0196640:CDS | 30.0% | |
| AGGAACATATATTCCCTATT+GGG | + | chr2_1:13998175-13998194 | None:intergenic | 30.0% | |
| AAGGAACATATATTCCCTAT+TGG | + | chr2_1:13998176-13998195 | None:intergenic | 30.0% | |
| !! | GAAACATTGGATTAGCAAAA+GGG | + | chr2_1:13998292-13998311 | None:intergenic | 30.0% |
| ! | GTGACACTATTTGGTTTAAT+TGG | + | chr2_1:13996660-13996679 | None:intergenic | 30.0% |
| ! | AGAAAAAACTTGGCATCTTT+TGG | - | chr2_1:13996788-13996807 | Msa0196640:CDS | 30.0% |
| ! | GAAAAAACTTGGCATCTTTT+GGG | - | chr2_1:13996789-13996808 | Msa0196640:CDS | 30.0% |
| GGCATGTGAAATGTTTATTA+TGG | - | chr2_1:13996947-13996966 | Msa0196640:CDS | 30.0% | |
| !! | GAAACATTTGATTTGCAAGA+GGG | + | chr2_1:13997295-13997314 | None:intergenic | 30.0% |
| TATGTATCAAAACACACAAG+AGG | - | chr2_1:13997605-13997624 | Msa0196640:intron | 30.0% | |
| !!! | TTCATTTTGTTTTGACCAGA+AGG | + | chr2_1:13997829-13997848 | None:intergenic | 30.0% |
| ATCTTCTTAATCCTTGCTAA+TGG | + | chr2_1:13997891-13997910 | None:intergenic | 30.0% | |
| AAGATCATGAAAACAGAAGA+AGG | - | chr2_1:13997906-13997925 | Msa0196640:CDS | 30.0% | |
| GGCATGTGAAATGTTTATTA+TGG | - | chr2_1:13996947-13996966 | Msa0196640:CDS | 30.0% | |
| AGGAACATATATTCCCTATT+GGG | + | chr2_1:13998175-13998194 | None:intergenic | 30.0% | |
| AAGGAACATATATTCCCTAT+TGG | + | chr2_1:13998176-13998195 | None:intergenic | 30.0% | |
| !! | GAAACATTGGATTAGCAAAA+GGG | + | chr2_1:13998292-13998311 | None:intergenic | 30.0% |
| CATCAACAGTGTGAAACAAA+GGG | + | chr2_1:13996690-13996709 | None:intergenic | 35.0% | |
| TCTACTCATGTAGGATGAAA+AGG | + | chr2_1:13996719-13996738 | None:intergenic | 35.0% | |
| CAAGAACTGCAGAAAAAACT+TGG | - | chr2_1:13996778-13996797 | Msa0196640:CDS | 35.0% | |
| CTAATGGCTTACCTTTAACA+AGG | - | chr2_1:13996853-13996872 | Msa0196640:CDS | 35.0% | |
| TAAGAAGATCATGAAAGCAG+AGG | - | chr2_1:13996878-13996897 | Msa0196640:CDS | 35.0% | |
| TTATTATGGAGCTAGCAACA+AGG | - | chr2_1:13996961-13996980 | Msa0196640:CDS | 35.0% | |
| AATGGAGCGTGACATATTTA+TGG | - | chr2_1:13997103-13997122 | Msa0196640:CDS | 35.0% | |
| ATGGAGCGTGACATATTTAT+GGG | - | chr2_1:13997104-13997123 | Msa0196640:CDS | 35.0% | |
| ATTCTTGGAGGACTATATGA+TGG | + | chr2_1:13997218-13997237 | None:intergenic | 35.0% | |
| !! | GGAAACATTTGATTTGCAAG+AGG | + | chr2_1:13997296-13997315 | None:intergenic | 35.0% |
| AATGTTTCCAATCCAAAAGC+AGG | - | chr2_1:13997307-13997326 | Msa0196640:intron | 35.0% | |
| !! | TCATTTTCCTGCTTTTGGAT+TGG | + | chr2_1:13997317-13997336 | None:intergenic | 35.0% |
| !! | AATGGTCATTTTCCTGCTTT+TGG | + | chr2_1:13997322-13997341 | None:intergenic | 35.0% |
| TCTACTCAAGTAGGATGAAA+GGG | + | chr2_1:13997742-13997761 | None:intergenic | 35.0% | |
| AGAAAAAACTTGACACCTTC+TGG | - | chr2_1:13997811-13997830 | Msa0196640:CDS | 35.0% | |
| TTATTATGGAGCTAGCAACA+AGG | - | chr2_1:13996961-13996980 | Msa0196640:CDS | 35.0% | |
| AATGGAGCGTGACATATTTA+TGG | - | chr2_1:13997103-13997122 | Msa0196640:CDS | 35.0% | |
| ATGGAGCGTGACATATTTAT+GGG | - | chr2_1:13997104-13997123 | Msa0196640:CDS | 35.0% | |
| CTCAACCAACGTAATTACAA+CGG | - | chr2_1:13998254-13998273 | Msa0196640:intron | 35.0% | |
| TCAACCAACGTAATTACAAC+GGG | - | chr2_1:13998255-13998274 | Msa0196640:intron | 35.0% | |
| !! | GGAAACATTGGATTAGCAAA+AGG | + | chr2_1:13998293-13998312 | None:intergenic | 35.0% |
| ! | TTCTTTGGGTTTGGAAACAT+TGG | + | chr2_1:13998305-13998324 | None:intergenic | 35.0% |
| ! | TTTCTTGCTTTCTTTGGGTT+TGG | + | chr2_1:13998314-13998333 | None:intergenic | 35.0% |
| CATCAACAGTGTGAAACAAA+GGG | + | chr2_1:13996690-13996709 | None:intergenic | 35.0% | |
| TCTACTCATGTAGGATGAAA+AGG | + | chr2_1:13996719-13996738 | None:intergenic | 35.0% | |
| CAAGAACTGCAGAAAAAACT+TGG | - | chr2_1:13996778-13996797 | Msa0196640:CDS | 35.0% | |
| CTAATGGCTTACCTTTAACA+AGG | - | chr2_1:13996853-13996872 | Msa0196640:CDS | 35.0% | |
| TAAGAAGATCATGAAAGCAG+AGG | - | chr2_1:13996878-13996897 | Msa0196640:CDS | 35.0% | |
| TTATTATGGAGCTAGCAACA+AGG | - | chr2_1:13996961-13996980 | Msa0196640:CDS | 35.0% | |
| AATGGAGCGTGACATATTTA+TGG | - | chr2_1:13997103-13997122 | Msa0196640:CDS | 35.0% | |
| ATGGAGCGTGACATATTTAT+GGG | - | chr2_1:13997104-13997123 | Msa0196640:CDS | 35.0% | |
| ATTCTTGGAGGACTATATGA+TGG | + | chr2_1:13997218-13997237 | None:intergenic | 35.0% | |
| !! | GGAAACATTTGATTTGCAAG+AGG | + | chr2_1:13997296-13997315 | None:intergenic | 35.0% |
| AATGTTTCCAATCCAAAAGC+AGG | - | chr2_1:13997307-13997326 | Msa0196640:intron | 35.0% | |
| !! | TCATTTTCCTGCTTTTGGAT+TGG | + | chr2_1:13997317-13997336 | None:intergenic | 35.0% |
| !! | AATGGTCATTTTCCTGCTTT+TGG | + | chr2_1:13997322-13997341 | None:intergenic | 35.0% |
| TCTACTCAAGTAGGATGAAA+GGG | + | chr2_1:13997742-13997761 | None:intergenic | 35.0% | |
| AGAAAAAACTTGACACCTTC+TGG | - | chr2_1:13997811-13997830 | Msa0196640:CDS | 35.0% | |
| TTATTATGGAGCTAGCAACA+AGG | - | chr2_1:13996961-13996980 | Msa0196640:CDS | 35.0% | |
| AATGGAGCGTGACATATTTA+TGG | - | chr2_1:13997103-13997122 | Msa0196640:CDS | 35.0% | |
| ATGGAGCGTGACATATTTAT+GGG | - | chr2_1:13997104-13997123 | Msa0196640:CDS | 35.0% | |
| CTCAACCAACGTAATTACAA+CGG | - | chr2_1:13998254-13998273 | Msa0196640:intron | 35.0% | |
| TCAACCAACGTAATTACAAC+GGG | - | chr2_1:13998255-13998274 | Msa0196640:intron | 35.0% | |
| !! | GGAAACATTGGATTAGCAAA+AGG | + | chr2_1:13998293-13998312 | None:intergenic | 35.0% |
| ! | TTCTTTGGGTTTGGAAACAT+TGG | + | chr2_1:13998305-13998324 | None:intergenic | 35.0% |
| ! | TTTCTTGCTTTCTTTGGGTT+TGG | + | chr2_1:13998314-13998333 | None:intergenic | 35.0% |
| GCATCAACAGTGTGAAACAA+AGG | + | chr2_1:13996691-13996710 | None:intergenic | 40.0% | |
| AACTCCAAGAATTCTCTCAC+CGG | - | chr2_1:13996743-13996762 | Msa0196640:CDS | 40.0% | |
| !! | GTTCTTGTTGTTTCTGTTGC+CGG | + | chr2_1:13996765-13996784 | None:intergenic | 40.0% |
| AAGATCATGAAAGCAGAGGA+AGG | - | chr2_1:13996882-13996901 | Msa0196640:CDS | 40.0% | |
| AGTGAGTATGATATCAGCTG+AGG | - | chr2_1:13996905-13996924 | Msa0196640:CDS | 40.0% | |
| CATGCCTTAGCAAACAGAAT+AGG | + | chr2_1:13996933-13996952 | None:intergenic | 40.0% | |
| ! | TCCTAGTTGATATTGTCCCT+AGG | - | chr2_1:13997072-13997091 | Msa0196640:CDS | 40.0% |
| ! | CCTAGTTGATATTGTCCCTA+GGG | - | chr2_1:13997073-13997092 | Msa0196640:CDS | 40.0% |
| TGTCCCTAGGGAAAAAACAA+TGG | - | chr2_1:13997085-13997104 | Msa0196640:CDS | 40.0% | |
| !!! | GCTCCATTGTTTTTTCCCTA+GGG | + | chr2_1:13997091-13997110 | None:intergenic | 40.0% |
| ATTGGGACACTTTCTCTTCT+TGG | + | chr2_1:13997134-13997153 | None:intergenic | 40.0% | |
| !! | AGAAGAGAAAGTGTCCCAAT+AGG | - | chr2_1:13997134-13997153 | Msa0196640:CDS | 40.0% |
| TCCTTATTATGTGCCTATGC+CGG | - | chr2_1:13997163-13997182 | Msa0196640:CDS | 40.0% | |
| TAGTCCTCCAAGAATGCTTA+TGG | - | chr2_1:13997223-13997242 | Msa0196640:CDS | 40.0% | |
| AGTCCTCCAAGAATGCTTAT+GGG | - | chr2_1:13997224-13997243 | Msa0196640:CDS | 40.0% | |
| TTATGAGGCTGATTGAGAGA+AGG | + | chr2_1:13997254-13997273 | None:intergenic | 40.0% | |
| TCAATCAGCCTCATAACAAC+AGG | - | chr2_1:13997258-13997277 | Msa0196640:intron | 40.0% | |
| AAAACACACAAGAGGAACGA+AGG | - | chr2_1:13997613-13997632 | Msa0196640:intron | 40.0% | |
| CACCTGCAGTGTAAAACAAA+GGG | + | chr2_1:13997713-13997732 | None:intergenic | 40.0% | |
| CTCTACTCAAGTAGGATGAA+AGG | + | chr2_1:13997743-13997762 | None:intergenic | 40.0% | |
| GAGTTGAACTCTACTCAAGT+AGG | + | chr2_1:13997751-13997770 | None:intergenic | 40.0% | |
| !!! | GTTGTCGGTGAGAGATTTTT+TGG | + | chr2_1:13997773-13997792 | None:intergenic | 40.0% |
| AGTGAGTATGATATCAGCTG+AGG | - | chr2_1:13996905-13996924 | Msa0196640:CDS | 40.0% | |
| CATGCCTTAGCAAACAGAAT+AGG | + | chr2_1:13996933-13996952 | None:intergenic | 40.0% | |
| ! | TCCTAGTTGATATTGTCCCT+AGG | - | chr2_1:13997072-13997091 | Msa0196640:CDS | 40.0% |
| ! | CCTAGTTGATATTGTCCCTA+GGG | - | chr2_1:13997073-13997092 | Msa0196640:CDS | 40.0% |
| TGTCCCTAGGGAAAAAACAA+TGG | - | chr2_1:13997085-13997104 | Msa0196640:CDS | 40.0% | |
| !!! | GCTCCATTGTTTTTTCCCTA+GGG | + | chr2_1:13997091-13997110 | None:intergenic | 40.0% |
| ATGGGTATACCAAGAAGAGA+AGG | - | chr2_1:13997122-13997141 | Msa0196640:CDS | 40.0% | |
| TCCTTATTATGTGCCTATGC+CGG | - | chr2_1:13997163-13997182 | Msa0196640:CDS | 40.0% | |
| !! | ATTGGATTAGCAAAAGGGTG+TGG | + | chr2_1:13998287-13998306 | None:intergenic | 40.0% |
| GCATCAACAGTGTGAAACAA+AGG | + | chr2_1:13996691-13996710 | None:intergenic | 40.0% | |
| AACTCCAAGAATTCTCTCAC+CGG | - | chr2_1:13996743-13996762 | Msa0196640:CDS | 40.0% | |
| !! | GTTCTTGTTGTTTCTGTTGC+CGG | + | chr2_1:13996765-13996784 | None:intergenic | 40.0% |
| AAGATCATGAAAGCAGAGGA+AGG | - | chr2_1:13996882-13996901 | Msa0196640:CDS | 40.0% | |
| AGTGAGTATGATATCAGCTG+AGG | - | chr2_1:13996905-13996924 | Msa0196640:CDS | 40.0% | |
| CATGCCTTAGCAAACAGAAT+AGG | + | chr2_1:13996933-13996952 | None:intergenic | 40.0% | |
| ! | TCCTAGTTGATATTGTCCCT+AGG | - | chr2_1:13997072-13997091 | Msa0196640:CDS | 40.0% |
| ! | CCTAGTTGATATTGTCCCTA+GGG | - | chr2_1:13997073-13997092 | Msa0196640:CDS | 40.0% |
| TGTCCCTAGGGAAAAAACAA+TGG | - | chr2_1:13997085-13997104 | Msa0196640:CDS | 40.0% | |
| !!! | GCTCCATTGTTTTTTCCCTA+GGG | + | chr2_1:13997091-13997110 | None:intergenic | 40.0% |
| ATTGGGACACTTTCTCTTCT+TGG | + | chr2_1:13997134-13997153 | None:intergenic | 40.0% | |
| !! | AGAAGAGAAAGTGTCCCAAT+AGG | - | chr2_1:13997134-13997153 | Msa0196640:CDS | 40.0% |
| TCCTTATTATGTGCCTATGC+CGG | - | chr2_1:13997163-13997182 | Msa0196640:CDS | 40.0% | |
| TAGTCCTCCAAGAATGCTTA+TGG | - | chr2_1:13997223-13997242 | Msa0196640:CDS | 40.0% | |
| AGTCCTCCAAGAATGCTTAT+GGG | - | chr2_1:13997224-13997243 | Msa0196640:CDS | 40.0% | |
| TTATGAGGCTGATTGAGAGA+AGG | + | chr2_1:13997254-13997273 | None:intergenic | 40.0% | |
| TCAATCAGCCTCATAACAAC+AGG | - | chr2_1:13997258-13997277 | Msa0196640:intron | 40.0% | |
| AAAACACACAAGAGGAACGA+AGG | - | chr2_1:13997613-13997632 | Msa0196640:intron | 40.0% | |
| CACCTGCAGTGTAAAACAAA+GGG | + | chr2_1:13997713-13997732 | None:intergenic | 40.0% | |
| CTCTACTCAAGTAGGATGAA+AGG | + | chr2_1:13997743-13997762 | None:intergenic | 40.0% | |
| GAGTTGAACTCTACTCAAGT+AGG | + | chr2_1:13997751-13997770 | None:intergenic | 40.0% | |
| !!! | GTTGTCGGTGAGAGATTTTT+TGG | + | chr2_1:13997773-13997792 | None:intergenic | 40.0% |
| AGTGAGTATGATATCAGCTG+AGG | - | chr2_1:13996905-13996924 | Msa0196640:CDS | 40.0% | |
| CATGCCTTAGCAAACAGAAT+AGG | + | chr2_1:13996933-13996952 | None:intergenic | 40.0% | |
| ! | TCCTAGTTGATATTGTCCCT+AGG | - | chr2_1:13997072-13997091 | Msa0196640:CDS | 40.0% |
| ! | CCTAGTTGATATTGTCCCTA+GGG | - | chr2_1:13997073-13997092 | Msa0196640:CDS | 40.0% |
| TGTCCCTAGGGAAAAAACAA+TGG | - | chr2_1:13997085-13997104 | Msa0196640:CDS | 40.0% | |
| !!! | GCTCCATTGTTTTTTCCCTA+GGG | + | chr2_1:13997091-13997110 | None:intergenic | 40.0% |
| ATGGGTATACCAAGAAGAGA+AGG | - | chr2_1:13997122-13997141 | Msa0196640:CDS | 40.0% | |
| TCCTTATTATGTGCCTATGC+CGG | - | chr2_1:13997163-13997182 | Msa0196640:CDS | 40.0% | |
| !! | ATTGGATTAGCAAAAGGGTG+TGG | + | chr2_1:13998287-13998306 | None:intergenic | 40.0% |
| GGCGAGATAGTGACACTATT+TGG | + | chr2_1:13996669-13996688 | None:intergenic | 45.0% | |
| GAGTTGAGCTCTACTCATGT+AGG | + | chr2_1:13996728-13996747 | None:intergenic | 45.0% | |
| ! | GGCACCTATTCTGTTTGCTA+AGG | - | chr2_1:13996926-13996945 | Msa0196640:CDS | 45.0% |
| ! | AAGGTCATGGGCTAATACAG+AGG | - | chr2_1:13996980-13996999 | Msa0196640:CDS | 45.0% |
| CCCTAGGGACAATATCAACT+AGG | + | chr2_1:13997076-13997095 | None:intergenic | 45.0% | |
| !!! | CGCTCCATTGTTTTTTCCCT+AGG | + | chr2_1:13997092-13997111 | None:intergenic | 45.0% |
| GTTCCCATAAGCATTCTTGG+AGG | + | chr2_1:13997230-13997249 | None:intergenic | 45.0% | |
| GGTGTTCCCATAAGCATTCT+TGG | + | chr2_1:13997233-13997252 | None:intergenic | 45.0% | |
| ! | TGATTTGCAAGAGGGTGTGA+GGG | + | chr2_1:13997287-13997306 | None:intergenic | 45.0% |
| !! | TTGATTTGCAAGAGGGTGTG+AGG | + | chr2_1:13997288-13997307 | None:intergenic | 45.0% |
| CCACTTGCTTGTGTTTGTGT+TGG | + | chr2_1:13997648-13997667 | None:intergenic | 45.0% | |
| CCAACACAAACACAAGCAAG+TGG | - | chr2_1:13997645-13997664 | Msa0196640:intron | 45.0% | |
| GCACCTGCAGTGTAAAACAA+AGG | + | chr2_1:13997714-13997733 | None:intergenic | 45.0% | |
| ! | GTAATGGCTTGCCATTAGCA+AGG | - | chr2_1:13997877-13997896 | Msa0196640:CDS | 45.0% |
| ! | GGCACCTATTCTGTTTGCTA+AGG | - | chr2_1:13996926-13996945 | Msa0196640:CDS | 45.0% |
| ! | AAGGTCATGGGCTAATACAG+AGG | - | chr2_1:13996980-13996999 | Msa0196640:CDS | 45.0% |
| CCCTAGGGACAATATCAACT+AGG | + | chr2_1:13997076-13997095 | None:intergenic | 45.0% | |
| !!! | CGCTCCATTGTTTTTTCCCT+AGG | + | chr2_1:13997092-13997111 | None:intergenic | 45.0% |
| ATTGGGACACCTTCTCTTCT+TGG | + | chr2_1:13998158-13998177 | None:intergenic | 45.0% | |
| !! | AGAAGAGAAGGTGTCCCAAT+AGG | - | chr2_1:13998158-13998177 | Msa0196640:CDS | 45.0% |
| !! | GAAGAGAAGGTGTCCCAATA+GGG | - | chr2_1:13998159-13998178 | Msa0196640:CDS | 45.0% |
| GGCGAGATAGTGACACTATT+TGG | + | chr2_1:13996669-13996688 | None:intergenic | 45.0% | |
| GAGTTGAGCTCTACTCATGT+AGG | + | chr2_1:13996728-13996747 | None:intergenic | 45.0% | |
| ! | GGCACCTATTCTGTTTGCTA+AGG | - | chr2_1:13996926-13996945 | Msa0196640:CDS | 45.0% |
| ! | AAGGTCATGGGCTAATACAG+AGG | - | chr2_1:13996980-13996999 | Msa0196640:CDS | 45.0% |
| CCCTAGGGACAATATCAACT+AGG | + | chr2_1:13997076-13997095 | None:intergenic | 45.0% | |
| !!! | CGCTCCATTGTTTTTTCCCT+AGG | + | chr2_1:13997092-13997111 | None:intergenic | 45.0% |
| GTTCCCATAAGCATTCTTGG+AGG | + | chr2_1:13997230-13997249 | None:intergenic | 45.0% | |
| GGTGTTCCCATAAGCATTCT+TGG | + | chr2_1:13997233-13997252 | None:intergenic | 45.0% | |
| ! | TGATTTGCAAGAGGGTGTGA+GGG | + | chr2_1:13997287-13997306 | None:intergenic | 45.0% |
| !! | TTGATTTGCAAGAGGGTGTG+AGG | + | chr2_1:13997288-13997307 | None:intergenic | 45.0% |
| CCACTTGCTTGTGTTTGTGT+TGG | + | chr2_1:13997648-13997667 | None:intergenic | 45.0% | |
| CCAACACAAACACAAGCAAG+TGG | - | chr2_1:13997645-13997664 | Msa0196640:intron | 45.0% | |
| GCACCTGCAGTGTAAAACAA+AGG | + | chr2_1:13997714-13997733 | None:intergenic | 45.0% | |
| ! | GTAATGGCTTGCCATTAGCA+AGG | - | chr2_1:13997877-13997896 | Msa0196640:CDS | 45.0% |
| ! | GGCACCTATTCTGTTTGCTA+AGG | - | chr2_1:13996926-13996945 | Msa0196640:CDS | 45.0% |
| ! | AAGGTCATGGGCTAATACAG+AGG | - | chr2_1:13996980-13996999 | Msa0196640:CDS | 45.0% |
| CCCTAGGGACAATATCAACT+AGG | + | chr2_1:13997076-13997095 | None:intergenic | 45.0% | |
| !!! | CGCTCCATTGTTTTTTCCCT+AGG | + | chr2_1:13997092-13997111 | None:intergenic | 45.0% |
| ATTGGGACACCTTCTCTTCT+TGG | + | chr2_1:13998158-13998177 | None:intergenic | 45.0% | |
| !! | AGAAGAGAAGGTGTCCCAAT+AGG | - | chr2_1:13998158-13998177 | Msa0196640:CDS | 45.0% |
| !! | GAAGAGAAGGTGTCCCAATA+GGG | - | chr2_1:13998159-13998178 | Msa0196640:CDS | 45.0% |
| GTTGCCGGTGAGAGAATTCT+TGG | + | chr2_1:13996750-13996769 | None:intergenic | 50.0% | |
| TGGAGCTAGCAACAAGGTCA+TGG | - | chr2_1:13996967-13996986 | Msa0196640:CDS | 50.0% | |
| GGAGCTAGCAACAAGGTCAT+GGG | - | chr2_1:13996968-13996987 | Msa0196640:CDS | 50.0% | |
| GCCGGCATAGGCACATAATA+AGG | + | chr2_1:13997167-13997186 | None:intergenic | 50.0% | |
| TACTGAGGTGGCATATGAGC+CGG | + | chr2_1:13997185-13997204 | None:intergenic | 50.0% | |
| ATGCCACCTCAGTATGATGC+AGG | - | chr2_1:13997191-13997210 | Msa0196640:CDS | 50.0% | |
| GATGGACCTGCATCATACTG+AGG | + | chr2_1:13997200-13997219 | None:intergenic | 50.0% | |
| !!! | CGCCCTTTGTTTTACACTGC+AGG | - | chr2_1:13997708-13997727 | Msa0196640:intron | 50.0% |
| TGGAGCTAGCAACAAGGTCA+TGG | - | chr2_1:13996967-13996986 | Msa0196640:CDS | 50.0% | |
| GGAGCTAGCAACAAGGTCAT+GGG | - | chr2_1:13996968-13996987 | Msa0196640:CDS | 50.0% | |
| GCCGGCATAGGCACATAATA+AGG | + | chr2_1:13997167-13997186 | None:intergenic | 50.0% | |
| TCTTCCCATAAGCATCCGTG+TGG | + | chr2_1:13998228-13998247 | None:intergenic | 50.0% | |
| GCTGCCCGTTGTAATTACGT+TGG | + | chr2_1:13998262-13998281 | None:intergenic | 50.0% | |
| ! | GGATTAGCAAAAGGGTGTGG+TGG | + | chr2_1:13998284-13998303 | None:intergenic | 50.0% |
| GTTGCCGGTGAGAGAATTCT+TGG | + | chr2_1:13996750-13996769 | None:intergenic | 50.0% | |
| TGGAGCTAGCAACAAGGTCA+TGG | - | chr2_1:13996967-13996986 | Msa0196640:CDS | 50.0% | |
| GGAGCTAGCAACAAGGTCAT+GGG | - | chr2_1:13996968-13996987 | Msa0196640:CDS | 50.0% | |
| GCCGGCATAGGCACATAATA+AGG | + | chr2_1:13997167-13997186 | None:intergenic | 50.0% | |
| TACTGAGGTGGCATATGAGC+CGG | + | chr2_1:13997185-13997204 | None:intergenic | 50.0% | |
| ATGCCACCTCAGTATGATGC+AGG | - | chr2_1:13997191-13997210 | Msa0196640:CDS | 50.0% | |
| GATGGACCTGCATCATACTG+AGG | + | chr2_1:13997200-13997219 | None:intergenic | 50.0% | |
| !!! | CGCCCTTTGTTTTACACTGC+AGG | - | chr2_1:13997708-13997727 | Msa0196640:intron | 50.0% |
| TGGAGCTAGCAACAAGGTCA+TGG | - | chr2_1:13996967-13996986 | Msa0196640:CDS | 50.0% | |
| GGAGCTAGCAACAAGGTCAT+GGG | - | chr2_1:13996968-13996987 | Msa0196640:CDS | 50.0% | |
| GCCGGCATAGGCACATAATA+AGG | + | chr2_1:13997167-13997186 | None:intergenic | 50.0% | |
| TCTTCCCATAAGCATCCGTG+TGG | + | chr2_1:13998228-13998247 | None:intergenic | 50.0% | |
| GCTGCCCGTTGTAATTACGT+TGG | + | chr2_1:13998262-13998281 | None:intergenic | 50.0% | |
| ! | GGATTAGCAAAAGGGTGTGG+TGG | + | chr2_1:13998284-13998303 | None:intergenic | 50.0% |
| GGACCTGCATCATACTGAGG+TGG | + | chr2_1:13997197-13997216 | None:intergenic | 55.0% | |
| GAGGGCTGCCTGTTGTTATG+AGG | + | chr2_1:13997269-13997288 | None:intergenic | 55.0% | |
| TGCCTCCACACGGATGCTTA+TGG | - | chr2_1:13998220-13998239 | Msa0196640:CDS | 55.0% | |
| GCCTCCACACGGATGCTTAT+GGG | - | chr2_1:13998221-13998240 | Msa0196640:CDS | 55.0% | |
| TCCCATAAGCATCCGTGTGG+AGG | + | chr2_1:13998225-13998244 | None:intergenic | 55.0% | |
| GGACCTGCATCATACTGAGG+TGG | + | chr2_1:13997197-13997216 | None:intergenic | 55.0% | |
| GAGGGCTGCCTGTTGTTATG+AGG | + | chr2_1:13997269-13997288 | None:intergenic | 55.0% | |
| TGCCTCCACACGGATGCTTA+TGG | - | chr2_1:13998220-13998239 | Msa0196640:CDS | 55.0% | |
| GCCTCCACACGGATGCTTAT+GGG | - | chr2_1:13998221-13998240 | Msa0196640:CDS | 55.0% | |
| TCCCATAAGCATCCGTGTGG+AGG | + | chr2_1:13998225-13998244 | None:intergenic | 55.0% | |
| GGTGGCATATGAGCCGGCAT+AGG | + | chr2_1:13997179-13997198 | None:intergenic | 60.0% | |
| ! | GGAGGCATATGAGCCGGCAT+AGG | + | chr2_1:13998207-13998226 | None:intergenic | 60.0% |
| ! | CCGTGTGGAGGCATATGAGC+CGG | + | chr2_1:13998213-13998232 | None:intergenic | 60.0% |
| CCGGCTCATATGCCTCCACA+CGG | - | chr2_1:13998210-13998229 | Msa0196640:CDS | 60.0% | |
| GGTGGCATATGAGCCGGCAT+AGG | + | chr2_1:13997179-13997198 | None:intergenic | 60.0% | |
| ! | GGAGGCATATGAGCCGGCAT+AGG | + | chr2_1:13998207-13998226 | None:intergenic | 60.0% |
| ! | CCGTGTGGAGGCATATGAGC+CGG | + | chr2_1:13998213-13998232 | None:intergenic | 60.0% |
| CCGGCTCATATGCCTCCACA+CGG | - | chr2_1:13998210-13998229 | Msa0196640:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 13996641 | 13998337 | 13996641 | ID=Msa0196640;Name=Msa0196640 |
| chr2_1 | mRNA | 13996641 | 13998337 | 13996641 | ID=Msa0196640-mRNA-1;Parent=Msa0196640;Name=Msa0196640-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|3|0|361 |
| chr2_1 | exon | 13998335 | 13998337 | 13998335 | ID=Msa0196640-mRNA-1:exon:6042;Parent=Msa0196640-mRNA-1 |
| chr2_1 | exon | 13997766 | 13998240 | 13997766 | ID=Msa0196640-mRNA-1:exon:6041;Parent=Msa0196640-mRNA-1 |
| chr2_1 | exon | 13996641 | 13997248 | 13996641 | ID=Msa0196640-mRNA-1:exon:6040;Parent=Msa0196640-mRNA-1 |
| chr2_1 | CDS | 13998335 | 13998337 | 13998335 | ID=Msa0196640-mRNA-1:cds;Parent=Msa0196640-mRNA-1 |
| chr2_1 | CDS | 13997766 | 13998240 | 13997766 | ID=Msa0196640-mRNA-1:cds;Parent=Msa0196640-mRNA-1 |
| chr2_1 | CDS | 13996641 | 13997248 | 13996641 | ID=Msa0196640-mRNA-1:cds;Parent=Msa0196640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
