Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197070 | XP_024632663.2 | 60.127 | 474 | 117 | 11 | 1 | 421 | 15 | 469 | 3.91e-155 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197070 | A0A072V4M0 | 60.127 | 474 | 117 | 11 | 1 | 421 | 15 | 469 | 1.87e-155 | 457 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0197070 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197070 | MtrunA17_Chr2g0289181 | 49.351 | 231 | 65 | 4 | 243 | 421 | 2 | 232 | 1.24e-58 | 191 |
| Msa0197070 | MtrunA17_Chr6g0470161 | 45.070 | 71 | 39 | 0 | 351 | 421 | 49 | 119 | 3.72e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 116 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTATAATAGTTCCATTTC+CGG | 0.183585 | 2_1:-14711343 | None:intergenic |
| TTTAATAAGAATGTTGTTAT+TGG | 0.185732 | 2_1:+14711213 | Msa0197070:CDS |
| GTACCTCCCATCACAAATTT+AGG | 0.196764 | 2_1:+14711235 | Msa0197070:CDS |
| GGGTGGGGATGGTGGTGGTC+AGG | 0.219889 | 2_1:-14710027 | None:intergenic |
| TTGAGGGAATGCTATGTTAT+TGG | 0.232068 | 2_1:-14709783 | None:intergenic |
| GATATTGTAGGTGGTGGAGG+TGG | 0.278924 | 2_1:-14709996 | None:intergenic |
| GTGGGGATGGTGGTGGTCAG+GGG | 0.289879 | 2_1:-14710025 | None:intergenic |
| ATAAATCCAGTTTCAGAATA+AGG | 0.301581 | 2_1:-14711499 | None:intergenic |
| GGTGATGTGGGTGGGGATGG+TGG | 0.303024 | 2_1:-14710035 | None:intergenic |
| TGGGGATGGTGGTGGTCAGG+GGG | 0.305119 | 2_1:-14710024 | None:intergenic |
| GGTGGGGATGGTGGTGGTCA+GGG | 0.307039 | 2_1:-14710026 | None:intergenic |
| TTCACATAACAACAAGATTA+TGG | 0.327717 | 2_1:+14711420 | Msa0197070:CDS |
| ATGAAGTCATTTGGTTTAAG+TGG | 0.330576 | 2_1:-14709872 | None:intergenic |
| TGGGATATTGTAGGTGGTGG+AGG | 0.330741 | 2_1:-14709999 | None:intergenic |
| AACTTGCCTTATTCTGAAAC+TGG | 0.331215 | 2_1:+14711493 | Msa0197070:CDS |
| ATCAATGCATGCAACAGGTT+TGG | 0.338091 | 2_1:-14710314 | None:intergenic |
| TTGGTTAGATGATTACTTAA+TGG | 0.339688 | 2_1:+14711570 | Msa0197070:CDS |
| CACTAAGCAAATCGAGAAAA+AGG | 0.340079 | 2_1:+14710383 | Msa0197070:CDS |
| ATAGTTCCATTTCCGGATAA+GGG | 0.344415 | 2_1:-14711336 | None:intergenic |
| AATAGTTCCATTTCCGGATA+AGG | 0.348085 | 2_1:-14711337 | None:intergenic |
| GAGTGTTAGGAAATTAAAAT+TGG | 0.348469 | 2_1:-14710242 | None:intergenic |
| GGGGATGGTGGTGGTCAGGG+GGG | 0.349141 | 2_1:-14710023 | None:intergenic |
| TCAATGCATGCAACAGGTTT+GGG | 0.360204 | 2_1:-14710313 | None:intergenic |
| ATTGTAGGTGGTGGAGGTGG+GGG | 0.360558 | 2_1:-14709993 | None:intergenic |
| GATGTGGGTGGGGATGGTGG+TGG | 0.361535 | 2_1:-14710032 | None:intergenic |
| TATTGTAGGTGGTGGAGGTG+GGG | 0.362235 | 2_1:-14709994 | None:intergenic |
| TCTAAATCTATGAAGTCATT+TGG | 0.362957 | 2_1:-14709881 | None:intergenic |
| ATATTGTAGGTGGTGGAGGT+GGG | 0.369979 | 2_1:-14709995 | None:intergenic |
| GTTGGTGATGTGGGTGGGGA+TGG | 0.376997 | 2_1:-14710038 | None:intergenic |
| GTTGTTGTTCCGCGAGTGTT+AGG | 0.379748 | 2_1:-14710255 | None:intergenic |
| GGATGGGATATTGTAGGTGG+TGG | 0.386256 | 2_1:-14710002 | None:intergenic |
| GTAGTGGCCGTATTAGTAAT+GGG | 0.386403 | 2_1:-14710130 | None:intergenic |
| GTGTTCGCAGTAGAGATGAT+AGG | 0.394801 | 2_1:-14710175 | None:intergenic |
| AGTAGCTGGGGTGGAGATAG+TGG | 0.401287 | 2_1:-14709933 | None:intergenic |
| AAACATCCCTTATCCGGAAA+TGG | 0.403232 | 2_1:+14711330 | Msa0197070:CDS |
| TAATGTTGGTGATGTGGGTG+GGG | 0.404886 | 2_1:-14710042 | None:intergenic |
| ATCCACAAATGTTAGAAACT+TGG | 0.408052 | 2_1:+14711396 | Msa0197070:intron |
| GTGGTTGTGGTGGTTTCAAT+CGG | 0.409952 | 2_1:-14709755 | None:intergenic |
| AGGGGTCGGGGTGATTATAT+TGG | 0.410652 | 2_1:-14710155 | None:intergenic |
| GTTTCAATCGGAGGTGGAGG+AGG | 0.417377 | 2_1:-14709743 | None:intergenic |
| TGCTATGTTATTGGCGGTGG+TGG | 0.423738 | 2_1:-14709774 | None:intergenic |
| GTGATATCAATGCATGCAAC+AGG | 0.433021 | 2_1:-14710319 | None:intergenic |
| GTTATTGGCGGTGGTGGTTG+TGG | 0.434702 | 2_1:-14709768 | None:intergenic |
| GACCCAGCTTCTTCGACAAC+GGG | 0.441727 | 2_1:-14711373 | None:intergenic |
| AAAGATGGTGTGGTACTTTG+AGG | 0.441819 | 2_1:-14709800 | None:intergenic |
| AGTGTTAATGTTGGTGATGT+GGG | 0.446897 | 2_1:-14710047 | None:intergenic |
| CAGTAGAGATGATAGGGGTC+GGG | 0.449702 | 2_1:-14710168 | None:intergenic |
| ACCCAAGTTTCTAACATTTG+TGG | 0.449992 | 2_1:-14711398 | None:intergenic |
| ACAACATTCTTATTAAATGT+TGG | 0.455370 | 2_1:-14711207 | None:intergenic |
| CATAGCACACCAATGCCGTT+TGG | 0.457071 | 2_1:-14710548 | None:intergenic |
| TCAATCAAACATCCCTTATC+CGG | 0.460461 | 2_1:+14711324 | Msa0197070:CDS |
| TTAATGTTGGTGATGTGGGT+GGG | 0.467691 | 2_1:-14710043 | None:intergenic |
| TCCACAAATGTTAGAAACTT+GGG | 0.479230 | 2_1:+14711397 | Msa0197070:intron |
| GTGGTTTCAATCGGAGGTGG+AGG | 0.483897 | 2_1:-14709746 | None:intergenic |
| AAGATGGTGTGGTACTTTGA+GGG | 0.484465 | 2_1:-14709799 | None:intergenic |
| TTACCCGTTGTCGAAGAAGC+TGG | 0.488577 | 2_1:+14711370 | Msa0197070:CDS |
| GTTAGGAAATTAAAATTGGT+GGG | 0.494516 | 2_1:-14710238 | None:intergenic |
| TGGGGTGGAGATAGTGGGGA+TGG | 0.497054 | 2_1:-14709927 | None:intergenic |
| AGCAATGCTCAAGTTGTTGT+CGG | 0.499521 | 2_1:+14711463 | Msa0197070:CDS |
| AGTGGTGGGAGTAGTGATGG+TGG | 0.500420 | 2_1:-14710092 | None:intergenic |
| GTAGCTGGGGTGGAGATAGT+GGG | 0.503727 | 2_1:-14709932 | None:intergenic |
| GTTAATGTTGGTGATGTGGG+TGG | 0.504390 | 2_1:-14710044 | None:intergenic |
| ACATGGGCATTGCTGCTCTC+CGG | 0.506612 | 2_1:-14711292 | None:intergenic |
| TGTAGTGGCCGTATTAGTAA+TGG | 0.506802 | 2_1:-14710131 | None:intergenic |
| TGTTCGCAGTAGAGATGATA+GGG | 0.507057 | 2_1:-14710174 | None:intergenic |
| ACTTATATTGTGATATATGA+AGG | 0.513077 | 2_1:+14711165 | Msa0197070:CDS |
| ATGGACTTCAACCGCCTCAA+TGG | 0.514519 | 2_1:+14711589 | Msa0197070:CDS |
| TTGATTGATCAACGAGAACA+TGG | 0.516364 | 2_1:-14711309 | None:intergenic |
| TGAAGTCATTTGGTTTAAGT+GGG | 0.518400 | 2_1:-14709871 | None:intergenic |
| AGGCAAACCTAAATTTGTGA+TGG | 0.518771 | 2_1:-14711242 | None:intergenic |
| TTAAGTGGGATAAAAGAGAA+TGG | 0.519646 | 2_1:-14709857 | None:intergenic |
| GTGGTGGTTTCAATCGGAGG+TGG | 0.519986 | 2_1:-14709749 | None:intergenic |
| GAGTAGTGATGGTGGGAGTG+TGG | 0.520200 | 2_1:-14710084 | None:intergenic |
| GTGAAATCATCAAAGAAAGA+TGG | 0.521869 | 2_1:-14709815 | None:intergenic |
| GTAATAGTATGGAGAGTGGT+GGG | 0.523121 | 2_1:-14710106 | None:intergenic |
| ACATAATAACCAAACGGCAT+TGG | 0.525701 | 2_1:+14710539 | Msa0197070:CDS |
| GAGAGTGGTGGGAGTAGTGA+TGG | 0.528944 | 2_1:-14710095 | None:intergenic |
| TGTTAGGAAATTAAAATTGG+TGG | 0.530065 | 2_1:-14710239 | None:intergenic |
| AGGGAATGCTATGTTATTGG+CGG | 0.530548 | 2_1:-14709780 | None:intergenic |
| GAATGCTATGTTATTGGCGG+TGG | 0.531601 | 2_1:-14709777 | None:intergenic |
| TGATAACAAACATAACAGCT+TGG | 0.533538 | 2_1:+14711551 | Msa0197070:CDS |
| GTGGTGGGAGTAGTGATGGT+GGG | 0.534801 | 2_1:-14710091 | None:intergenic |
| GGTGATTATATTGGTTGTAG+TGG | 0.536550 | 2_1:-14710146 | None:intergenic |
| GGCAAACCTAAATTTGTGAT+GGG | 0.538510 | 2_1:-14711241 | None:intergenic |
| ATTGGCGGTGGTGGTTGTGG+TGG | 0.540132 | 2_1:-14709765 | None:intergenic |
| TAGTGTTAATGTTGGTGATG+TGG | 0.540874 | 2_1:-14710048 | None:intergenic |
| GCAGTAGAGATGATAGGGGT+CGG | 0.543866 | 2_1:-14710169 | None:intergenic |
| GATGTTGTAGTTTGATCATC+CGG | 0.546610 | 2_1:+14711273 | Msa0197070:intron |
| TAAGTGGGATAAAAGAGAAT+GGG | 0.549661 | 2_1:-14709856 | None:intergenic |
| CAGAAAACATAATAACCAAA+CGG | 0.550138 | 2_1:+14710533 | Msa0197070:intron |
| AGATTGTCCAGCAAGAAGAA+AGG | 0.551728 | 2_1:+14711116 | Msa0197070:CDS |
| TACCCGTTGTCGAAGAAGCT+GGG | 0.554513 | 2_1:+14711371 | Msa0197070:CDS |
| AGTAGAGATGATAGGGGTCG+GGG | 0.555014 | 2_1:-14710167 | None:intergenic |
| GTTGTGGTGGTTTCAATCGG+AGG | 0.560812 | 2_1:-14709752 | None:intergenic |
| TGACCCAGCTTCTTCGACAA+CGG | 0.566165 | 2_1:-14711374 | None:intergenic |
| TGGCATACTAGTAGCTGGGG+TGG | 0.566316 | 2_1:-14709942 | None:intergenic |
| CTATTACAAATGTAGCACTT+TGG | 0.573456 | 2_1:+14711092 | Msa0197070:CDS |
| TTAGGAAATTAAAATTGGTG+GGG | 0.575907 | 2_1:-14710237 | None:intergenic |
| TTTCAATCGGAGGTGGAGGA+GGG | 0.591027 | 2_1:-14709742 | None:intergenic |
| GACTTCAACCGCCTCAATGG+TGG | 0.595091 | 2_1:+14711592 | Msa0197070:CDS |
| GGGGTGGAGATAGTGGGGAT+GGG | 0.599391 | 2_1:-14709926 | None:intergenic |
| AGAATAGAGCACCACCATTG+AGG | 0.605565 | 2_1:-14711603 | None:intergenic |
| GATTTGCTTAGTGCAACTGA+TGG | 0.610064 | 2_1:-14710373 | None:intergenic |
| ATGAACACTAGTGTTTGTCA+TGG | 0.612356 | 2_1:-14710200 | None:intergenic |
| TAGCTGGGGTGGAGATAGTG+GGG | 0.614917 | 2_1:-14709931 | None:intergenic |
| ATCATCAAAGAAAGATGGTG+TGG | 0.615055 | 2_1:-14709810 | None:intergenic |
| ATGAACATTAGTGTTAATGT+TGG | 0.619182 | 2_1:-14710056 | None:intergenic |
| GGTAATAGTATGGAGAGTGG+TGG | 0.626131 | 2_1:-14710107 | None:intergenic |
| TAGTGGCCGTATTAGTAATG+GGG | 0.630367 | 2_1:-14710129 | None:intergenic |
| AAACCTAAATTTGTGATGGG+AGG | 0.652334 | 2_1:-14711238 | None:intergenic |
| GGTGGTAGGAGTGGTAAATG+TGG | 0.664560 | 2_1:-14709708 | None:intergenic |
| ATAGAGCACCACCATTGAGG+CGG | 0.679111 | 2_1:-14711600 | None:intergenic |
| TGATTGATCAACGAGAACAT+GGG | 0.680853 | 2_1:-14711308 | None:intergenic |
| AGTGGCCGTATTAGTAATGG+GGG | 0.703018 | 2_1:-14710128 | None:intergenic |
| ACTTGAGCATTGCTACTCTG+TGG | 0.710623 | 2_1:-14711454 | None:intergenic |
| GTTCGCAGTAGAGATGATAG+GGG | 0.735858 | 2_1:-14710173 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATATATAAAATAAT+AGG | - | chr2_1:14710422-14710441 | None:intergenic | 0.0% |
| !! | ATTAAAATATATAAAATAAT+AGG | - | chr2_1:14710422-14710441 | None:intergenic | 0.0% |
| !! | TTAAAAAAGTTATTTATTAG+GGG | - | chr2_1:14710974-14710993 | None:intergenic | 10.0% |
| !! | CTTAAAAAAGTTATTTATTA+GGG | - | chr2_1:14710975-14710994 | None:intergenic | 10.0% |
| !! | TTAAAAAAGTTATTTATTAG+GGG | - | chr2_1:14710974-14710993 | None:intergenic | 10.0% |
| !! | CTTAAAAAAGTTATTTATTA+GGG | - | chr2_1:14710975-14710994 | None:intergenic | 10.0% |
| !! | TTCTAATTAAATTCAACATA+TGG | + | chr2_1:14710790-14710809 | Msa0197070:intron | 15.0% |
| !! | GCTTAAAAAAGTTATTTATT+AGG | - | chr2_1:14710976-14710995 | None:intergenic | 15.0% |
| !! | TTTAATAAGAATGTTGTTAT+TGG | + | chr2_1:14711213-14711232 | Msa0197070:CDS | 15.0% |
| !! | TTCTAATTAAATTCAACATA+TGG | + | chr2_1:14710790-14710809 | Msa0197070:intron | 15.0% |
| !! | GCTTAAAAAAGTTATTTATT+AGG | - | chr2_1:14710976-14710995 | None:intergenic | 15.0% |
| !! | TTTAATAAGAATGTTGTTAT+TGG | + | chr2_1:14711213-14711232 | Msa0197070:CDS | 15.0% |
| !! | TAGAATTATATGCAATGAAT+AGG | - | chr2_1:14710775-14710794 | None:intergenic | 20.0% |
| !! | TAAAGGAAGTAAAAACATAT+TGG | - | chr2_1:14710928-14710947 | None:intergenic | 20.0% |
| !! | ACTTATATTGTGATATATGA+AGG | + | chr2_1:14711165-14711184 | Msa0197070:CDS | 20.0% |
| !! | ACAACATTCTTATTAAATGT+TGG | - | chr2_1:14711210-14711229 | None:intergenic | 20.0% |
| !! | TAGAATTATATGCAATGAAT+AGG | - | chr2_1:14710775-14710794 | None:intergenic | 20.0% |
| !! | TAAAGGAAGTAAAAACATAT+TGG | - | chr2_1:14710928-14710947 | None:intergenic | 20.0% |
| !! | ACTTATATTGTGATATATGA+AGG | + | chr2_1:14711165-14711184 | Msa0197070:CDS | 20.0% |
| !! | ACAACATTCTTATTAAATGT+TGG | - | chr2_1:14711210-14711229 | None:intergenic | 20.0% |
| ! | TCTAAATCTATGAAGTCATT+TGG | - | chr2_1:14709884-14709903 | None:intergenic | 25.0% |
| ! | ATGAACATTAGTGTTAATGT+TGG | - | chr2_1:14710059-14710078 | None:intergenic | 25.0% |
| ! | TTAGGAAATTAAAATTGGTG+GGG | - | chr2_1:14710240-14710259 | None:intergenic | 25.0% |
| ! | GTTAGGAAATTAAAATTGGT+GGG | - | chr2_1:14710241-14710260 | None:intergenic | 25.0% |
| ! | TGTTAGGAAATTAAAATTGG+TGG | - | chr2_1:14710242-14710261 | None:intergenic | 25.0% |
| ! | GAGTGTTAGGAAATTAAAAT+TGG | - | chr2_1:14710245-14710264 | None:intergenic | 25.0% |
| ! | TATTCTTACGTAACTTAACT+CGG | + | chr2_1:14710477-14710496 | Msa0197070:intron | 25.0% |
| !! | TGTTTTCTGTAAGAAAAGAA+AGG | - | chr2_1:14710522-14710541 | None:intergenic | 25.0% |
| ! | CAGAAAACATAATAACCAAA+CGG | + | chr2_1:14710533-14710552 | Msa0197070:intron | 25.0% |
| !! | AATCAATGTTTAAAACTCGA+GGG | - | chr2_1:14710738-14710757 | None:intergenic | 25.0% |
| !!! | GAGTTTTAAACATTGATTGT+AGG | + | chr2_1:14710740-14710759 | Msa0197070:intron | 25.0% |
| ! | AACATATGGTATCTTAATCA+CGG | + | chr2_1:14710804-14710823 | Msa0197070:intron | 25.0% |
| ! | GAAAAATATGGTACACTTAA+AGG | - | chr2_1:14710945-14710964 | None:intergenic | 25.0% |
| !! | AAATTTGTTTATGCTGAAAC+TGG | + | chr2_1:14711023-14711042 | Msa0197070:intron | 25.0% |
| ! | TTCACATAACAACAAGATTA+TGG | + | chr2_1:14711420-14711439 | Msa0197070:CDS | 25.0% |
| ! | ATAAATCCAGTTTCAGAATA+AGG | - | chr2_1:14711502-14711521 | None:intergenic | 25.0% |
| ! | TTGGTTAGATGATTACTTAA+TGG | + | chr2_1:14711570-14711589 | Msa0197070:CDS | 25.0% |
| ! | TCTAAATCTATGAAGTCATT+TGG | - | chr2_1:14709884-14709903 | None:intergenic | 25.0% |
| ! | ATGAACATTAGTGTTAATGT+TGG | - | chr2_1:14710059-14710078 | None:intergenic | 25.0% |
| ! | TTAGGAAATTAAAATTGGTG+GGG | - | chr2_1:14710240-14710259 | None:intergenic | 25.0% |
| ! | GTTAGGAAATTAAAATTGGT+GGG | - | chr2_1:14710241-14710260 | None:intergenic | 25.0% |
| ! | TGTTAGGAAATTAAAATTGG+TGG | - | chr2_1:14710242-14710261 | None:intergenic | 25.0% |
| ! | GAGTGTTAGGAAATTAAAAT+TGG | - | chr2_1:14710245-14710264 | None:intergenic | 25.0% |
| ! | TATTCTTACGTAACTTAACT+CGG | + | chr2_1:14710477-14710496 | Msa0197070:intron | 25.0% |
| !! | TGTTTTCTGTAAGAAAAGAA+AGG | - | chr2_1:14710522-14710541 | None:intergenic | 25.0% |
| ! | CAGAAAACATAATAACCAAA+CGG | + | chr2_1:14710533-14710552 | Msa0197070:intron | 25.0% |
| !! | AATCAATGTTTAAAACTCGA+GGG | - | chr2_1:14710738-14710757 | None:intergenic | 25.0% |
| !!! | GAGTTTTAAACATTGATTGT+AGG | + | chr2_1:14710740-14710759 | Msa0197070:intron | 25.0% |
| ! | AACATATGGTATCTTAATCA+CGG | + | chr2_1:14710804-14710823 | Msa0197070:intron | 25.0% |
| ! | GAAAAATATGGTACACTTAA+AGG | - | chr2_1:14710945-14710964 | None:intergenic | 25.0% |
| !! | AAATTTGTTTATGCTGAAAC+TGG | + | chr2_1:14711023-14711042 | Msa0197070:intron | 25.0% |
| ! | TTCACATAACAACAAGATTA+TGG | + | chr2_1:14711420-14711439 | Msa0197070:CDS | 25.0% |
| ! | ATAAATCCAGTTTCAGAATA+AGG | - | chr2_1:14711502-14711521 | None:intergenic | 25.0% |
| ! | TTGGTTAGATGATTACTTAA+TGG | + | chr2_1:14711570-14711589 | Msa0197070:CDS | 25.0% |
| GTGAAATCATCAAAGAAAGA+TGG | - | chr2_1:14709818-14709837 | None:intergenic | 30.0% | |
| TAAGTGGGATAAAAGAGAAT+GGG | - | chr2_1:14709859-14709878 | None:intergenic | 30.0% | |
| TTAAGTGGGATAAAAGAGAA+TGG | - | chr2_1:14709860-14709879 | None:intergenic | 30.0% | |
| ! | TGAAGTCATTTGGTTTAAGT+GGG | - | chr2_1:14709874-14709893 | None:intergenic | 30.0% |
| ! | ATGAAGTCATTTGGTTTAAG+TGG | - | chr2_1:14709875-14709894 | None:intergenic | 30.0% |
| TATTACCCCCATTACTAATA+CGG | + | chr2_1:14710123-14710142 | Msa0197070:CDS | 30.0% | |
| !!! | TTTTAATTTCCTAACACTCG+CGG | + | chr2_1:14710246-14710265 | Msa0197070:CDS | 30.0% |
| GTATGCATGATAAAAATGAG+CGG | - | chr2_1:14710347-14710366 | None:intergenic | 30.0% | |
| ! | CAATCAATGTTTAAAACTCG+AGG | - | chr2_1:14710739-14710758 | None:intergenic | 30.0% |
| ! | TAAACATTGATTGTAGGCAT+TGG | + | chr2_1:14710746-14710765 | Msa0197070:intron | 30.0% |
| ! | AAACATTGATTGTAGGCATT+GGG | + | chr2_1:14710747-14710766 | Msa0197070:intron | 30.0% |
| TAGGGGCTTAAAGAAAAATA+TGG | - | chr2_1:14710957-14710976 | None:intergenic | 30.0% | |
| ! | TCAGCATAAACAAATTTTGC+AGG | - | chr2_1:14711020-14711039 | None:intergenic | 30.0% |
| TCTTTAATAAATGATGCTGC+AGG | + | chr2_1:14711067-14711086 | Msa0197070:intron | 30.0% | |
| CTATTACAAATGTAGCACTT+TGG | + | chr2_1:14711092-14711111 | Msa0197070:CDS | 30.0% | |
| ! | AAATTTAGGTTTGCCTAATG+TGG | + | chr2_1:14711249-14711268 | Msa0197070:intron | 30.0% |
| CTCTATAATAGTTCCATTTC+CGG | - | chr2_1:14711346-14711365 | None:intergenic | 30.0% | |
| ATCCACAAATGTTAGAAACT+TGG | + | chr2_1:14711396-14711415 | Msa0197070:intron | 30.0% | |
| TCCACAAATGTTAGAAACTT+GGG | + | chr2_1:14711397-14711416 | Msa0197070:intron | 30.0% | |
| TGATAACAAACATAACAGCT+TGG | + | chr2_1:14711551-14711570 | Msa0197070:CDS | 30.0% | |
| GTGAAATCATCAAAGAAAGA+TGG | - | chr2_1:14709818-14709837 | None:intergenic | 30.0% | |
| TAAGTGGGATAAAAGAGAAT+GGG | - | chr2_1:14709859-14709878 | None:intergenic | 30.0% | |
| TTAAGTGGGATAAAAGAGAA+TGG | - | chr2_1:14709860-14709879 | None:intergenic | 30.0% | |
| ! | TGAAGTCATTTGGTTTAAGT+GGG | - | chr2_1:14709874-14709893 | None:intergenic | 30.0% |
| ! | ATGAAGTCATTTGGTTTAAG+TGG | - | chr2_1:14709875-14709894 | None:intergenic | 30.0% |
| TATTACCCCCATTACTAATA+CGG | + | chr2_1:14710123-14710142 | Msa0197070:CDS | 30.0% | |
| !!! | TTTTAATTTCCTAACACTCG+CGG | + | chr2_1:14710246-14710265 | Msa0197070:CDS | 30.0% |
| GTATGCATGATAAAAATGAG+CGG | - | chr2_1:14710347-14710366 | None:intergenic | 30.0% | |
| ! | CAATCAATGTTTAAAACTCG+AGG | - | chr2_1:14710739-14710758 | None:intergenic | 30.0% |
| ! | TAAACATTGATTGTAGGCAT+TGG | + | chr2_1:14710746-14710765 | Msa0197070:intron | 30.0% |
| ! | AAACATTGATTGTAGGCATT+GGG | + | chr2_1:14710747-14710766 | Msa0197070:intron | 30.0% |
| TAGGGGCTTAAAGAAAAATA+TGG | - | chr2_1:14710957-14710976 | None:intergenic | 30.0% | |
| ! | TCAGCATAAACAAATTTTGC+AGG | - | chr2_1:14711020-14711039 | None:intergenic | 30.0% |
| TCTTTAATAAATGATGCTGC+AGG | + | chr2_1:14711067-14711086 | Msa0197070:intron | 30.0% | |
| CTATTACAAATGTAGCACTT+TGG | + | chr2_1:14711092-14711111 | Msa0197070:CDS | 30.0% | |
| ! | AAATTTAGGTTTGCCTAATG+TGG | + | chr2_1:14711249-14711268 | Msa0197070:intron | 30.0% |
| CTCTATAATAGTTCCATTTC+CGG | - | chr2_1:14711346-14711365 | None:intergenic | 30.0% | |
| ATCCACAAATGTTAGAAACT+TGG | + | chr2_1:14711396-14711415 | Msa0197070:intron | 30.0% | |
| TCCACAAATGTTAGAAACTT+GGG | + | chr2_1:14711397-14711416 | Msa0197070:intron | 30.0% | |
| TGATAACAAACATAACAGCT+TGG | + | chr2_1:14711551-14711570 | Msa0197070:CDS | 30.0% | |
| TTGAGGGAATGCTATGTTAT+TGG | - | chr2_1:14709786-14709805 | None:intergenic | 35.0% | |
| ATCATCAAAGAAAGATGGTG+TGG | - | chr2_1:14709813-14709832 | None:intergenic | 35.0% | |
| !! | TTTTTGGCATACTAGTAGCT+GGG | - | chr2_1:14709949-14709968 | None:intergenic | 35.0% |
| !!! | ATTTTTGGCATACTAGTAGC+TGG | - | chr2_1:14709950-14709969 | None:intergenic | 35.0% |
| !!! | GTGGTGATGGTATTGATTTT+TGG | - | chr2_1:14709965-14709984 | None:intergenic | 35.0% |
| !! | AGTGTTAATGTTGGTGATGT+GGG | - | chr2_1:14710050-14710069 | None:intergenic | 35.0% |
| !! | TAGTGTTAATGTTGGTGATG+TGG | - | chr2_1:14710051-14710070 | None:intergenic | 35.0% |
| ! | TAGTAATGGGGGTAATAGTA+TGG | - | chr2_1:14710120-14710139 | None:intergenic | 35.0% |
| ! | GGTGATTATATTGGTTGTAG+TGG | - | chr2_1:14710149-14710168 | None:intergenic | 35.0% |
| ATGAACACTAGTGTTTGTCA+TGG | - | chr2_1:14710203-14710222 | None:intergenic | 35.0% | |
| CACTAAGCAAATCGAGAAAA+AGG | + | chr2_1:14710383-14710402 | Msa0197070:CDS | 35.0% | |
| ACATAATAACCAAACGGCAT+TGG | + | chr2_1:14710539-14710558 | Msa0197070:CDS | 35.0% | |
| TATGGACAGAAACCCATTAA+AGG | + | chr2_1:14710603-14710622 | Msa0197070:intron | 35.0% | |
| ATGGACAGAAACCCATTAAA+GGG | + | chr2_1:14710604-14710623 | Msa0197070:intron | 35.0% | |
| ! | TTTTGAATGTGTGTGAACCT+TGG | - | chr2_1:14710639-14710658 | None:intergenic | 35.0% |
| TTTAAATGTGCAGCTCATTG+TGG | - | chr2_1:14710880-14710899 | None:intergenic | 35.0% | |
| ! | TTTTCTACCTTTCTTCTTGC+TGG | - | chr2_1:14711126-14711145 | None:intergenic | 35.0% |
| ! | AAACCTAAATTTGTGATGGG+AGG | - | chr2_1:14711241-14711260 | None:intergenic | 35.0% |
| GGCAAACCTAAATTTGTGAT+GGG | - | chr2_1:14711244-14711263 | None:intergenic | 35.0% | |
| AGGCAAACCTAAATTTGTGA+TGG | - | chr2_1:14711245-14711264 | None:intergenic | 35.0% | |
| AACTACAACATCACCACATT+AGG | - | chr2_1:14711265-14711284 | None:intergenic | 35.0% | |
| GATGTTGTAGTTTGATCATC+CGG | + | chr2_1:14711273-14711292 | Msa0197070:intron | 35.0% | |
| TGATTGATCAACGAGAACAT+GGG | - | chr2_1:14711311-14711330 | None:intergenic | 35.0% | |
| TTGATTGATCAACGAGAACA+TGG | - | chr2_1:14711312-14711331 | None:intergenic | 35.0% | |
| TCAATCAAACATCCCTTATC+CGG | + | chr2_1:14711324-14711343 | Msa0197070:CDS | 35.0% | |
| ATAGTTCCATTTCCGGATAA+GGG | - | chr2_1:14711339-14711358 | None:intergenic | 35.0% | |
| AATAGTTCCATTTCCGGATA+AGG | - | chr2_1:14711340-14711359 | None:intergenic | 35.0% | |
| ACCCAAGTTTCTAACATTTG+TGG | - | chr2_1:14711401-14711420 | None:intergenic | 35.0% | |
| !! | AACTTGCCTTATTCTGAAAC+TGG | + | chr2_1:14711493-14711512 | Msa0197070:CDS | 35.0% |
| TTGAGGGAATGCTATGTTAT+TGG | - | chr2_1:14709786-14709805 | None:intergenic | 35.0% | |
| ATCATCAAAGAAAGATGGTG+TGG | - | chr2_1:14709813-14709832 | None:intergenic | 35.0% | |
| !! | TTTTTGGCATACTAGTAGCT+GGG | - | chr2_1:14709949-14709968 | None:intergenic | 35.0% |
| !!! | ATTTTTGGCATACTAGTAGC+TGG | - | chr2_1:14709950-14709969 | None:intergenic | 35.0% |
| !!! | GTGGTGATGGTATTGATTTT+TGG | - | chr2_1:14709965-14709984 | None:intergenic | 35.0% |
| !! | AGTGTTAATGTTGGTGATGT+GGG | - | chr2_1:14710050-14710069 | None:intergenic | 35.0% |
| !! | TAGTGTTAATGTTGGTGATG+TGG | - | chr2_1:14710051-14710070 | None:intergenic | 35.0% |
| ! | TAGTAATGGGGGTAATAGTA+TGG | - | chr2_1:14710120-14710139 | None:intergenic | 35.0% |
| ! | GGTGATTATATTGGTTGTAG+TGG | - | chr2_1:14710149-14710168 | None:intergenic | 35.0% |
| ATGAACACTAGTGTTTGTCA+TGG | - | chr2_1:14710203-14710222 | None:intergenic | 35.0% | |
| CACTAAGCAAATCGAGAAAA+AGG | + | chr2_1:14710383-14710402 | Msa0197070:CDS | 35.0% | |
| ACATAATAACCAAACGGCAT+TGG | + | chr2_1:14710539-14710558 | Msa0197070:CDS | 35.0% | |
| TATGGACAGAAACCCATTAA+AGG | + | chr2_1:14710603-14710622 | Msa0197070:intron | 35.0% | |
| ATGGACAGAAACCCATTAAA+GGG | + | chr2_1:14710604-14710623 | Msa0197070:intron | 35.0% | |
| ! | TTTTGAATGTGTGTGAACCT+TGG | - | chr2_1:14710639-14710658 | None:intergenic | 35.0% |
| TTTAAATGTGCAGCTCATTG+TGG | - | chr2_1:14710880-14710899 | None:intergenic | 35.0% | |
| ! | TTTTCTACCTTTCTTCTTGC+TGG | - | chr2_1:14711126-14711145 | None:intergenic | 35.0% |
| ! | AAACCTAAATTTGTGATGGG+AGG | - | chr2_1:14711241-14711260 | None:intergenic | 35.0% |
| GGCAAACCTAAATTTGTGAT+GGG | - | chr2_1:14711244-14711263 | None:intergenic | 35.0% | |
| AGGCAAACCTAAATTTGTGA+TGG | - | chr2_1:14711245-14711264 | None:intergenic | 35.0% | |
| AACTACAACATCACCACATT+AGG | - | chr2_1:14711265-14711284 | None:intergenic | 35.0% | |
| GATGTTGTAGTTTGATCATC+CGG | + | chr2_1:14711273-14711292 | Msa0197070:intron | 35.0% | |
| TGATTGATCAACGAGAACAT+GGG | - | chr2_1:14711311-14711330 | None:intergenic | 35.0% | |
| TTGATTGATCAACGAGAACA+TGG | - | chr2_1:14711312-14711331 | None:intergenic | 35.0% | |
| TCAATCAAACATCCCTTATC+CGG | + | chr2_1:14711324-14711343 | Msa0197070:CDS | 35.0% | |
| ATAGTTCCATTTCCGGATAA+GGG | - | chr2_1:14711339-14711358 | None:intergenic | 35.0% | |
| AATAGTTCCATTTCCGGATA+AGG | - | chr2_1:14711340-14711359 | None:intergenic | 35.0% | |
| ACCCAAGTTTCTAACATTTG+TGG | - | chr2_1:14711401-14711420 | None:intergenic | 35.0% | |
| !! | AACTTGCCTTATTCTGAAAC+TGG | + | chr2_1:14711493-14711512 | Msa0197070:CDS | 35.0% |
| TTCAAAAATGGTGGTAGGAG+TGG | - | chr2_1:14709720-14709739 | None:intergenic | 40.0% | |
| AGGGAATGCTATGTTATTGG+CGG | - | chr2_1:14709783-14709802 | None:intergenic | 40.0% | |
| AAGATGGTGTGGTACTTTGA+GGG | - | chr2_1:14709802-14709821 | None:intergenic | 40.0% | |
| AAAGATGGTGTGGTACTTTG+AGG | - | chr2_1:14709803-14709822 | None:intergenic | 40.0% | |
| !! | AAGAGAATGGGCTCTTTTCA+TGG | - | chr2_1:14709847-14709866 | None:intergenic | 40.0% |
| ! | TTTTGGCATACTAGTAGCTG+GGG | - | chr2_1:14709948-14709967 | None:intergenic | 40.0% |
| !! | TTAATGTTGGTGATGTGGGT+GGG | - | chr2_1:14710046-14710065 | None:intergenic | 40.0% |
| GTAATAGTATGGAGAGTGGT+GGG | - | chr2_1:14710109-14710128 | None:intergenic | 40.0% | |
| TAGTGGCCGTATTAGTAATG+GGG | - | chr2_1:14710132-14710151 | None:intergenic | 40.0% | |
| GTAGTGGCCGTATTAGTAAT+GGG | - | chr2_1:14710133-14710152 | None:intergenic | 40.0% | |
| TGTAGTGGCCGTATTAGTAA+TGG | - | chr2_1:14710134-14710153 | None:intergenic | 40.0% | |
| TGTTCGCAGTAGAGATGATA+GGG | - | chr2_1:14710177-14710196 | None:intergenic | 40.0% | |
| TCAATGCATGCAACAGGTTT+GGG | - | chr2_1:14710316-14710335 | None:intergenic | 40.0% | |
| ATCAATGCATGCAACAGGTT+TGG | - | chr2_1:14710317-14710336 | None:intergenic | 40.0% | |
| GTGATATCAATGCATGCAAC+AGG | - | chr2_1:14710322-14710341 | None:intergenic | 40.0% | |
| ! | GATTTGCTTAGTGCAACTGA+TGG | - | chr2_1:14710376-14710395 | None:intergenic | 40.0% |
| ATGAGCTTTCAAAAGACTCG+TGG | + | chr2_1:14710568-14710587 | Msa0197070:intron | 40.0% | |
| TGAGCTTTCAAAAGACTCGT+GGG | + | chr2_1:14710569-14710588 | Msa0197070:intron | 40.0% | |
| ! | ATGTTTAAAACTCGAGGGTG+CGG | - | chr2_1:14710733-14710752 | None:intergenic | 40.0% |
| GCTCATTGTGGATAATTGAG+TGG | - | chr2_1:14710868-14710887 | None:intergenic | 40.0% | |
| AGATTGTCCAGCAAGAAGAA+AGG | + | chr2_1:14711116-14711135 | Msa0197070:CDS | 40.0% | |
| GTACCTCCCATCACAAATTT+AGG | + | chr2_1:14711235-14711254 | Msa0197070:CDS | 40.0% | |
| AAACATCCCTTATCCGGAAA+TGG | + | chr2_1:14711330-14711349 | Msa0197070:CDS | 40.0% | |
| ! | AGCAATGCTCAAGTTGTTGT+CGG | + | chr2_1:14711463-14711482 | Msa0197070:CDS | 40.0% |
| TTCAAAAATGGTGGTAGGAG+TGG | - | chr2_1:14709720-14709739 | None:intergenic | 40.0% | |
| AGGGAATGCTATGTTATTGG+CGG | - | chr2_1:14709783-14709802 | None:intergenic | 40.0% | |
| AAGATGGTGTGGTACTTTGA+GGG | - | chr2_1:14709802-14709821 | None:intergenic | 40.0% | |
| AAAGATGGTGTGGTACTTTG+AGG | - | chr2_1:14709803-14709822 | None:intergenic | 40.0% | |
| !! | AAGAGAATGGGCTCTTTTCA+TGG | - | chr2_1:14709847-14709866 | None:intergenic | 40.0% |
| ! | TTTTGGCATACTAGTAGCTG+GGG | - | chr2_1:14709948-14709967 | None:intergenic | 40.0% |
| !! | TTAATGTTGGTGATGTGGGT+GGG | - | chr2_1:14710046-14710065 | None:intergenic | 40.0% |
| GTAATAGTATGGAGAGTGGT+GGG | - | chr2_1:14710109-14710128 | None:intergenic | 40.0% | |
| TAGTGGCCGTATTAGTAATG+GGG | - | chr2_1:14710132-14710151 | None:intergenic | 40.0% | |
| GTAGTGGCCGTATTAGTAAT+GGG | - | chr2_1:14710133-14710152 | None:intergenic | 40.0% | |
| TGTAGTGGCCGTATTAGTAA+TGG | - | chr2_1:14710134-14710153 | None:intergenic | 40.0% | |
| TGTTCGCAGTAGAGATGATA+GGG | - | chr2_1:14710177-14710196 | None:intergenic | 40.0% | |
| TCAATGCATGCAACAGGTTT+GGG | - | chr2_1:14710316-14710335 | None:intergenic | 40.0% | |
| ATCAATGCATGCAACAGGTT+TGG | - | chr2_1:14710317-14710336 | None:intergenic | 40.0% | |
| GTGATATCAATGCATGCAAC+AGG | - | chr2_1:14710322-14710341 | None:intergenic | 40.0% | |
| ! | GATTTGCTTAGTGCAACTGA+TGG | - | chr2_1:14710376-14710395 | None:intergenic | 40.0% |
| ATGAGCTTTCAAAAGACTCG+TGG | + | chr2_1:14710568-14710587 | Msa0197070:intron | 40.0% | |
| TGAGCTTTCAAAAGACTCGT+GGG | + | chr2_1:14710569-14710588 | Msa0197070:intron | 40.0% | |
| ! | ATGTTTAAAACTCGAGGGTG+CGG | - | chr2_1:14710733-14710752 | None:intergenic | 40.0% |
| GCTCATTGTGGATAATTGAG+TGG | - | chr2_1:14710868-14710887 | None:intergenic | 40.0% | |
| AGATTGTCCAGCAAGAAGAA+AGG | + | chr2_1:14711116-14711135 | Msa0197070:CDS | 40.0% | |
| GTACCTCCCATCACAAATTT+AGG | + | chr2_1:14711235-14711254 | Msa0197070:CDS | 40.0% | |
| AAACATCCCTTATCCGGAAA+TGG | + | chr2_1:14711330-14711349 | Msa0197070:CDS | 40.0% | |
| ! | AGCAATGCTCAAGTTGTTGT+CGG | + | chr2_1:14711463-14711482 | Msa0197070:CDS | 40.0% |
| GGGTCTTCAAAAATGGTGGT+AGG | - | chr2_1:14709725-14709744 | None:intergenic | 45.0% | |
| AGGAGGGTCTTCAAAAATGG+TGG | - | chr2_1:14709729-14709748 | None:intergenic | 45.0% | |
| TGGAGGAGGGTCTTCAAAAA+TGG | - | chr2_1:14709732-14709751 | None:intergenic | 45.0% | |
| GTGGTTGTGGTGGTTTCAAT+CGG | - | chr2_1:14709758-14709777 | None:intergenic | 45.0% | |
| GAATGCTATGTTATTGGCGG+TGG | - | chr2_1:14709780-14709799 | None:intergenic | 45.0% | |
| !! | ATATTGTAGGTGGTGGAGGT+GGG | - | chr2_1:14709998-14710017 | None:intergenic | 45.0% |
| !! | TAATGTTGGTGATGTGGGTG+GGG | - | chr2_1:14710045-14710064 | None:intergenic | 45.0% |
| !! | GTTAATGTTGGTGATGTGGG+TGG | - | chr2_1:14710047-14710066 | None:intergenic | 45.0% |
| GGTAATAGTATGGAGAGTGG+TGG | - | chr2_1:14710110-14710129 | None:intergenic | 45.0% | |
| AGTGGCCGTATTAGTAATGG+GGG | - | chr2_1:14710131-14710150 | None:intergenic | 45.0% | |
| GTTCGCAGTAGAGATGATAG+GGG | - | chr2_1:14710176-14710195 | None:intergenic | 45.0% | |
| GTGTTCGCAGTAGAGATGAT+AGG | - | chr2_1:14710178-14710197 | None:intergenic | 45.0% | |
| TCGTGGGCATGAAGGAAATA+TGG | + | chr2_1:14710585-14710604 | Msa0197070:intron | 45.0% | |
| GGATGTGGAGACCCTTTAAT+GGG | - | chr2_1:14710618-14710637 | None:intergenic | 45.0% | |
| TGGATGTGGAGACCCTTTAA+TGG | - | chr2_1:14710619-14710638 | None:intergenic | 45.0% | |
| TTAAAGGGTCTCCACATCCA+AGG | + | chr2_1:14710619-14710638 | Msa0197070:intron | 45.0% | |
| ATGTGTGTGAACCTTGGATG+TGG | - | chr2_1:14710633-14710652 | None:intergenic | 45.0% | |
| !! | AGGGTGCGGTTGTTTGTTTT+AGG | - | chr2_1:14710719-14710738 | None:intergenic | 45.0% |
| ! | ACTTGAGCATTGCTACTCTG+TGG | - | chr2_1:14711457-14711476 | None:intergenic | 45.0% |
| ! | AGAATAGAGCACCACCATTG+AGG | - | chr2_1:14711606-14711625 | None:intergenic | 45.0% |
| GGGTCTTCAAAAATGGTGGT+AGG | - | chr2_1:14709725-14709744 | None:intergenic | 45.0% | |
| AGGAGGGTCTTCAAAAATGG+TGG | - | chr2_1:14709729-14709748 | None:intergenic | 45.0% | |
| TGGAGGAGGGTCTTCAAAAA+TGG | - | chr2_1:14709732-14709751 | None:intergenic | 45.0% | |
| GTGGTTGTGGTGGTTTCAAT+CGG | - | chr2_1:14709758-14709777 | None:intergenic | 45.0% | |
| GAATGCTATGTTATTGGCGG+TGG | - | chr2_1:14709780-14709799 | None:intergenic | 45.0% | |
| !! | ATATTGTAGGTGGTGGAGGT+GGG | - | chr2_1:14709998-14710017 | None:intergenic | 45.0% |
| !! | TAATGTTGGTGATGTGGGTG+GGG | - | chr2_1:14710045-14710064 | None:intergenic | 45.0% |
| !! | GTTAATGTTGGTGATGTGGG+TGG | - | chr2_1:14710047-14710066 | None:intergenic | 45.0% |
| GGTAATAGTATGGAGAGTGG+TGG | - | chr2_1:14710110-14710129 | None:intergenic | 45.0% | |
| AGTGGCCGTATTAGTAATGG+GGG | - | chr2_1:14710131-14710150 | None:intergenic | 45.0% | |
| GTTCGCAGTAGAGATGATAG+GGG | - | chr2_1:14710176-14710195 | None:intergenic | 45.0% | |
| GTGTTCGCAGTAGAGATGAT+AGG | - | chr2_1:14710178-14710197 | None:intergenic | 45.0% | |
| TCGTGGGCATGAAGGAAATA+TGG | + | chr2_1:14710585-14710604 | Msa0197070:intron | 45.0% | |
| GGATGTGGAGACCCTTTAAT+GGG | - | chr2_1:14710618-14710637 | None:intergenic | 45.0% | |
| TGGATGTGGAGACCCTTTAA+TGG | - | chr2_1:14710619-14710638 | None:intergenic | 45.0% | |
| TTAAAGGGTCTCCACATCCA+AGG | + | chr2_1:14710619-14710638 | Msa0197070:intron | 45.0% | |
| ATGTGTGTGAACCTTGGATG+TGG | - | chr2_1:14710633-14710652 | None:intergenic | 45.0% | |
| !! | AGGGTGCGGTTGTTTGTTTT+AGG | - | chr2_1:14710719-14710738 | None:intergenic | 45.0% |
| ! | ACTTGAGCATTGCTACTCTG+TGG | - | chr2_1:14711457-14711476 | None:intergenic | 45.0% |
| ! | AGAATAGAGCACCACCATTG+AGG | - | chr2_1:14711606-14711625 | None:intergenic | 45.0% |
| !! | AAATAATATCAATTTATTAT+TGG | + | chr2_1:14710900-14710919 | Msa0197070:intron | 5.0% |
| !! | AAATAATATCAATTTATTAT+TGG | + | chr2_1:14710900-14710919 | Msa0197070:intron | 5.0% |
| GGTGGTAGGAGTGGTAAATG+TGG | - | chr2_1:14709711-14709730 | None:intergenic | 50.0% | |
| TTTCAATCGGAGGTGGAGGA+GGG | - | chr2_1:14709745-14709764 | None:intergenic | 50.0% | |
| GTTGTGGTGGTTTCAATCGG+AGG | - | chr2_1:14709755-14709774 | None:intergenic | 50.0% | |
| TGCTATGTTATTGGCGGTGG+TGG | - | chr2_1:14709777-14709796 | None:intergenic | 50.0% | |
| !! | TATTGTAGGTGGTGGAGGTG+GGG | - | chr2_1:14709997-14710016 | None:intergenic | 50.0% |
| !! | GATATTGTAGGTGGTGGAGG+TGG | - | chr2_1:14709999-14710018 | None:intergenic | 50.0% |
| ! | TGGGATATTGTAGGTGGTGG+AGG | - | chr2_1:14710002-14710021 | None:intergenic | 50.0% |
| GGATGGGATATTGTAGGTGG+TGG | - | chr2_1:14710005-14710024 | None:intergenic | 50.0% | |
| GGGGGTAATAGTATGGAGAG+TGG | - | chr2_1:14710113-14710132 | None:intergenic | 50.0% | |
| AGGGGTCGGGGTGATTATAT+TGG | - | chr2_1:14710158-14710177 | None:intergenic | 50.0% | |
| AGTAGAGATGATAGGGGTCG+GGG | - | chr2_1:14710170-14710189 | None:intergenic | 50.0% | |
| CAGTAGAGATGATAGGGGTC+GGG | - | chr2_1:14710171-14710190 | None:intergenic | 50.0% | |
| GCAGTAGAGATGATAGGGGT+CGG | - | chr2_1:14710172-14710191 | None:intergenic | 50.0% | |
| ! | GTTGTTGTTCCGCGAGTGTT+AGG | - | chr2_1:14710258-14710277 | None:intergenic | 50.0% |
| CATAGCACACCAATGCCGTT+TGG | - | chr2_1:14710551-14710570 | None:intergenic | 50.0% | |
| CAAAAGACTCGTGGGCATGA+AGG | + | chr2_1:14710577-14710596 | Msa0197070:intron | 50.0% | |
| TTACCCGTTGTCGAAGAAGC+TGG | + | chr2_1:14711370-14711389 | Msa0197070:CDS | 50.0% | |
| TACCCGTTGTCGAAGAAGCT+GGG | + | chr2_1:14711371-14711390 | Msa0197070:CDS | 50.0% | |
| TGACCCAGCTTCTTCGACAA+CGG | - | chr2_1:14711377-14711396 | None:intergenic | 50.0% | |
| ATGGACTTCAACCGCCTCAA+TGG | + | chr2_1:14711589-14711608 | Msa0197070:CDS | 50.0% | |
| ! | ATAGAGCACCACCATTGAGG+CGG | - | chr2_1:14711603-14711622 | None:intergenic | 50.0% |
| GGTGGTAGGAGTGGTAAATG+TGG | - | chr2_1:14709711-14709730 | None:intergenic | 50.0% | |
| TTTCAATCGGAGGTGGAGGA+GGG | - | chr2_1:14709745-14709764 | None:intergenic | 50.0% | |
| GTTGTGGTGGTTTCAATCGG+AGG | - | chr2_1:14709755-14709774 | None:intergenic | 50.0% | |
| TGCTATGTTATTGGCGGTGG+TGG | - | chr2_1:14709777-14709796 | None:intergenic | 50.0% | |
| !! | TATTGTAGGTGGTGGAGGTG+GGG | - | chr2_1:14709997-14710016 | None:intergenic | 50.0% |
| !! | GATATTGTAGGTGGTGGAGG+TGG | - | chr2_1:14709999-14710018 | None:intergenic | 50.0% |
| ! | TGGGATATTGTAGGTGGTGG+AGG | - | chr2_1:14710002-14710021 | None:intergenic | 50.0% |
| GGATGGGATATTGTAGGTGG+TGG | - | chr2_1:14710005-14710024 | None:intergenic | 50.0% | |
| GGGGGTAATAGTATGGAGAG+TGG | - | chr2_1:14710113-14710132 | None:intergenic | 50.0% | |
| AGGGGTCGGGGTGATTATAT+TGG | - | chr2_1:14710158-14710177 | None:intergenic | 50.0% | |
| AGTAGAGATGATAGGGGTCG+GGG | - | chr2_1:14710170-14710189 | None:intergenic | 50.0% | |
| CAGTAGAGATGATAGGGGTC+GGG | - | chr2_1:14710171-14710190 | None:intergenic | 50.0% | |
| GCAGTAGAGATGATAGGGGT+CGG | - | chr2_1:14710172-14710191 | None:intergenic | 50.0% | |
| ! | GTTGTTGTTCCGCGAGTGTT+AGG | - | chr2_1:14710258-14710277 | None:intergenic | 50.0% |
| CATAGCACACCAATGCCGTT+TGG | - | chr2_1:14710551-14710570 | None:intergenic | 50.0% | |
| CAAAAGACTCGTGGGCATGA+AGG | + | chr2_1:14710577-14710596 | Msa0197070:intron | 50.0% | |
| TTACCCGTTGTCGAAGAAGC+TGG | + | chr2_1:14711370-14711389 | Msa0197070:CDS | 50.0% | |
| TACCCGTTGTCGAAGAAGCT+GGG | + | chr2_1:14711371-14711390 | Msa0197070:CDS | 50.0% | |
| TGACCCAGCTTCTTCGACAA+CGG | - | chr2_1:14711377-14711396 | None:intergenic | 50.0% | |
| ATGGACTTCAACCGCCTCAA+TGG | + | chr2_1:14711589-14711608 | Msa0197070:CDS | 50.0% | |
| ! | ATAGAGCACCACCATTGAGG+CGG | - | chr2_1:14711603-14711622 | None:intergenic | 50.0% |
| GTTTCAATCGGAGGTGGAGG+AGG | - | chr2_1:14709746-14709765 | None:intergenic | 55.0% | |
| GTGGTTTCAATCGGAGGTGG+AGG | - | chr2_1:14709749-14709768 | None:intergenic | 55.0% | |
| GTGGTGGTTTCAATCGGAGG+TGG | - | chr2_1:14709752-14709771 | None:intergenic | 55.0% | |
| ! | GTTATTGGCGGTGGTGGTTG+TGG | - | chr2_1:14709771-14709790 | None:intergenic | 55.0% |
| TAGCTGGGGTGGAGATAGTG+GGG | - | chr2_1:14709934-14709953 | None:intergenic | 55.0% | |
| GTAGCTGGGGTGGAGATAGT+GGG | - | chr2_1:14709935-14709954 | None:intergenic | 55.0% | |
| AGTAGCTGGGGTGGAGATAG+TGG | - | chr2_1:14709936-14709955 | None:intergenic | 55.0% | |
| TGGCATACTAGTAGCTGGGG+TGG | - | chr2_1:14709945-14709964 | None:intergenic | 55.0% | |
| !! | ATTGTAGGTGGTGGAGGTGG+GGG | - | chr2_1:14709996-14710015 | None:intergenic | 55.0% |
| GGGGGATGGGATATTGTAGG+TGG | - | chr2_1:14710008-14710027 | None:intergenic | 55.0% | |
| CAGGGGGGATGGGATATTGT+AGG | - | chr2_1:14710011-14710030 | None:intergenic | 55.0% | |
| !! | GAGTAGTGATGGTGGGAGTG+TGG | - | chr2_1:14710087-14710106 | None:intergenic | 55.0% |
| ! | GTGGTGGGAGTAGTGATGGT+GGG | - | chr2_1:14710094-14710113 | None:intergenic | 55.0% |
| ! | AGTGGTGGGAGTAGTGATGG+TGG | - | chr2_1:14710095-14710114 | None:intergenic | 55.0% |
| ! | GAGAGTGGTGGGAGTAGTGA+TGG | - | chr2_1:14710098-14710117 | None:intergenic | 55.0% |
| ! | ACATGGGCATTGCTGCTCTC+CGG | - | chr2_1:14711295-14711314 | None:intergenic | 55.0% |
| GACCCAGCTTCTTCGACAAC+GGG | - | chr2_1:14711376-14711395 | None:intergenic | 55.0% | |
| GACTTCAACCGCCTCAATGG+TGG | + | chr2_1:14711592-14711611 | Msa0197070:CDS | 55.0% | |
| GTTTCAATCGGAGGTGGAGG+AGG | - | chr2_1:14709746-14709765 | None:intergenic | 55.0% | |
| GTGGTTTCAATCGGAGGTGG+AGG | - | chr2_1:14709749-14709768 | None:intergenic | 55.0% | |
| GTGGTGGTTTCAATCGGAGG+TGG | - | chr2_1:14709752-14709771 | None:intergenic | 55.0% | |
| ! | GTTATTGGCGGTGGTGGTTG+TGG | - | chr2_1:14709771-14709790 | None:intergenic | 55.0% |
| TAGCTGGGGTGGAGATAGTG+GGG | - | chr2_1:14709934-14709953 | None:intergenic | 55.0% | |
| GTAGCTGGGGTGGAGATAGT+GGG | - | chr2_1:14709935-14709954 | None:intergenic | 55.0% | |
| AGTAGCTGGGGTGGAGATAG+TGG | - | chr2_1:14709936-14709955 | None:intergenic | 55.0% | |
| TGGCATACTAGTAGCTGGGG+TGG | - | chr2_1:14709945-14709964 | None:intergenic | 55.0% | |
| !! | ATTGTAGGTGGTGGAGGTGG+GGG | - | chr2_1:14709996-14710015 | None:intergenic | 55.0% |
| GGGGGATGGGATATTGTAGG+TGG | - | chr2_1:14710008-14710027 | None:intergenic | 55.0% | |
| CAGGGGGGATGGGATATTGT+AGG | - | chr2_1:14710011-14710030 | None:intergenic | 55.0% | |
| !! | GAGTAGTGATGGTGGGAGTG+TGG | - | chr2_1:14710087-14710106 | None:intergenic | 55.0% |
| ! | GTGGTGGGAGTAGTGATGGT+GGG | - | chr2_1:14710094-14710113 | None:intergenic | 55.0% |
| ! | AGTGGTGGGAGTAGTGATGG+TGG | - | chr2_1:14710095-14710114 | None:intergenic | 55.0% |
| ! | GAGAGTGGTGGGAGTAGTGA+TGG | - | chr2_1:14710098-14710117 | None:intergenic | 55.0% |
| ! | ACATGGGCATTGCTGCTCTC+CGG | - | chr2_1:14711295-14711314 | None:intergenic | 55.0% |
| GACCCAGCTTCTTCGACAAC+GGG | - | chr2_1:14711376-14711395 | None:intergenic | 55.0% | |
| GACTTCAACCGCCTCAATGG+TGG | + | chr2_1:14711592-14711611 | Msa0197070:CDS | 55.0% | |
| ! | ATTGGCGGTGGTGGTTGTGG+TGG | - | chr2_1:14709768-14709787 | None:intergenic | 60.0% |
| !! | GGGGTGGAGATAGTGGGGAT+GGG | - | chr2_1:14709929-14709948 | None:intergenic | 60.0% |
| !! | TGGGGTGGAGATAGTGGGGA+TGG | - | chr2_1:14709930-14709949 | None:intergenic | 60.0% |
| ! | GGGGGAAGATGTGGTGGTGA+TGG | - | chr2_1:14709978-14709997 | None:intergenic | 60.0% |
| !! | GTTGGTGATGTGGGTGGGGA+TGG | - | chr2_1:14710041-14710060 | None:intergenic | 60.0% |
| ! | ATTGGCGGTGGTGGTTGTGG+TGG | - | chr2_1:14709768-14709787 | None:intergenic | 60.0% |
| !! | GGGGTGGAGATAGTGGGGAT+GGG | - | chr2_1:14709929-14709948 | None:intergenic | 60.0% |
| !! | TGGGGTGGAGATAGTGGGGA+TGG | - | chr2_1:14709930-14709949 | None:intergenic | 60.0% |
| ! | GGGGGAAGATGTGGTGGTGA+TGG | - | chr2_1:14709978-14709997 | None:intergenic | 60.0% |
| !! | GTTGGTGATGTGGGTGGGGA+TGG | - | chr2_1:14710041-14710060 | None:intergenic | 60.0% |
| GGAGGTGGGGGAAGATGTGG+TGG | - | chr2_1:14709984-14710003 | None:intergenic | 65.0% | |
| GGTGGAGGTGGGGGAAGATG+TGG | - | chr2_1:14709987-14710006 | None:intergenic | 65.0% | |
| !! | TGGTGGTGGTCAGGGGGGAT+GGG | - | chr2_1:14710021-14710040 | None:intergenic | 65.0% |
| !! | ATGGTGGTGGTCAGGGGGGA+TGG | - | chr2_1:14710022-14710041 | None:intergenic | 65.0% |
| !! | TGGGGATGGTGGTGGTCAGG+GGG | - | chr2_1:14710027-14710046 | None:intergenic | 65.0% |
| !! | GTGGGGATGGTGGTGGTCAG+GGG | - | chr2_1:14710028-14710047 | None:intergenic | 65.0% |
| !! | GGTGGGGATGGTGGTGGTCA+GGG | - | chr2_1:14710029-14710048 | None:intergenic | 65.0% |
| ! | GATGTGGGTGGGGATGGTGG+TGG | - | chr2_1:14710035-14710054 | None:intergenic | 65.0% |
| GGTGATGTGGGTGGGGATGG+TGG | - | chr2_1:14710038-14710057 | None:intergenic | 65.0% | |
| GGAGGTGGGGGAAGATGTGG+TGG | - | chr2_1:14709984-14710003 | None:intergenic | 65.0% | |
| GGTGGAGGTGGGGGAAGATG+TGG | - | chr2_1:14709987-14710006 | None:intergenic | 65.0% | |
| !! | TGGTGGTGGTCAGGGGGGAT+GGG | - | chr2_1:14710021-14710040 | None:intergenic | 65.0% |
| !! | ATGGTGGTGGTCAGGGGGGA+TGG | - | chr2_1:14710022-14710041 | None:intergenic | 65.0% |
| !! | TGGGGATGGTGGTGGTCAGG+GGG | - | chr2_1:14710027-14710046 | None:intergenic | 65.0% |
| !! | GTGGGGATGGTGGTGGTCAG+GGG | - | chr2_1:14710028-14710047 | None:intergenic | 65.0% |
| !! | GGTGGGGATGGTGGTGGTCA+GGG | - | chr2_1:14710029-14710048 | None:intergenic | 65.0% |
| ! | GATGTGGGTGGGGATGGTGG+TGG | - | chr2_1:14710035-14710054 | None:intergenic | 65.0% |
| GGTGATGTGGGTGGGGATGG+TGG | - | chr2_1:14710038-14710057 | None:intergenic | 65.0% | |
| !! | GGGGATGGTGGTGGTCAGGG+GGG | - | chr2_1:14710026-14710045 | None:intergenic | 70.0% |
| !! | GGGTGGGGATGGTGGTGGTC+AGG | - | chr2_1:14710030-14710049 | None:intergenic | 70.0% |
| !! | GGGGATGGTGGTGGTCAGGG+GGG | - | chr2_1:14710026-14710045 | None:intergenic | 70.0% |
| !! | GGGTGGGGATGGTGGTGGTC+AGG | - | chr2_1:14710030-14710049 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 14709698 | 14711627 | 14709698 | ID=Msa0197070;Name=Msa0197070 |
| chr2_1 | mRNA | 14709698 | 14711627 | 14709698 | ID=Msa0197070-mRNA-1;Parent=Msa0197070;Name=Msa0197070-mRNA-1;_AED=0.05;_eAED=0.14;_QI=0|0|0|1|0|0.2|5|0|422 |
| chr2_1 | exon | 14709698 | 14710404 | 14709698 | ID=Msa0197070-mRNA-1:exon:6258;Parent=Msa0197070-mRNA-1 |
| chr2_1 | exon | 14710536 | 14710586 | 14710536 | ID=Msa0197070-mRNA-1:exon:6259;Parent=Msa0197070-mRNA-1 |
| chr2_1 | exon | 14711089 | 14711256 | 14711089 | ID=Msa0197070-mRNA-1:exon:6260;Parent=Msa0197070-mRNA-1 |
| chr2_1 | exon | 14711283 | 14711405 | 14711283 | ID=Msa0197070-mRNA-1:exon:6261;Parent=Msa0197070-mRNA-1 |
| chr2_1 | exon | 14711411 | 14711627 | 14711411 | ID=Msa0197070-mRNA-1:exon:6262;Parent=Msa0197070-mRNA-1 |
| chr2_1 | CDS | 14709698 | 14710404 | 14709698 | ID=Msa0197070-mRNA-1:cds;Parent=Msa0197070-mRNA-1 |
| chr2_1 | CDS | 14710536 | 14710586 | 14710536 | ID=Msa0197070-mRNA-1:cds;Parent=Msa0197070-mRNA-1 |
| chr2_1 | CDS | 14711089 | 14711256 | 14711089 | ID=Msa0197070-mRNA-1:cds;Parent=Msa0197070-mRNA-1 |
| chr2_1 | CDS | 14711283 | 14711405 | 14711283 | ID=Msa0197070-mRNA-1:cds;Parent=Msa0197070-mRNA-1 |
| chr2_1 | CDS | 14711411 | 14711627 | 14711411 | ID=Msa0197070-mRNA-1:cds;Parent=Msa0197070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
