AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0199790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0199790 MtrunA17_Chr2g0294461 84.245 603 46 10 435 1006 3 587 0.0 976
Msa0199790 MtrunA17_Chr2g0294461 72.769 437 65 6 50 442 139 565 0.0 592
Msa0199790 MtrunA17_Chr2g0294461 64.062 64 23 0 4 67 26 89 2.39e-17 87.0
Msa0199790 MtrunA17_Chr2g0294471 75.815 583 102 10 454 1006 5 578 0.0 852
Msa0199790 MtrunA17_Chr2g0294471 71.396 437 78 7 50 442 123 556 0.0 579
Msa0199790 MtrunA17_Chr2g0294471 76.316 38 9 0 14 51 17 54 3.45e-11 67.0
Msa0199790 MtrunA17_Chr7g0270031 45.148 474 237 6 535 1006 104 556 5.94e-127 397
Msa0199790 MtrunA17_Chr7g0270031 40.678 413 191 9 74 442 132 534 1.00e-81 276
Msa0199790 MtrunA17_Chr1g0194621 44.930 503 245 10 512 1006 42 520 2.97e-125 391
Msa0199790 MtrunA17_Chr1g0194621 38.274 452 218 13 41 442 58 498 3.79e-75 256
Msa0199790 MtrunA17_Chr8g0376381 31.969 391 236 8 620 1005 158 523 6.67e-53 194
Msa0199790 MtrunA17_Chr8g0376381 28.090 356 193 9 153 474 203 529 8.49e-32 131
Msa0199790 MtrunA17_Chr3g0110971 28.074 431 272 9 593 1005 178 588 1.44e-50 189
Msa0199790 MtrunA17_Chr3g0110971 26.627 338 177 8 153 442 253 567 4.86e-29 123
Msa0199790 MtrunA17_Chr2g0306641 28.788 396 251 8 621 1006 115 489 1.32e-42 163
Msa0199790 MtrunA17_Chr2g0306641 27.726 321 180 9 153 438 161 464 8.63e-27 115
Msa0199790 MtrunA17_Chr4g0057891 30.000 400 252 11 621 1004 133 520 1.06e-41 160
Msa0199790 MtrunA17_Chr4g0057891 25.574 305 177 9 154 418 184 478 5.80e-21 97.8
Msa0199790 MtrunA17_Chr7g0224271 29.851 402 252 9 618 1004 287 673 6.96e-41 161
Msa0199790 MtrunA17_Chr7g0224271 26.994 326 179 12 153 433 334 645 6.21e-24 108
Msa0199790 MtrunA17_Chr8g0357601 29.250 400 242 12 624 1004 175 552 7.94e-39 153
Msa0199790 MtrunA17_Chr8g0357601 29.060 234 137 6 226 433 294 524 4.14e-20 95.5
Msa0199790 MtrunA17_Chr4g0031711 28.861 395 256 10 621 1003 351 732 5.41e-37 149
Msa0199790 MtrunA17_Chr4g0031711 27.217 327 186 9 134 417 372 689 7.64e-23 105
Msa0199790 MtrunA17_Chr4g0031741 29.381 388 247 12 626 1003 279 649 2.47e-36 147
Msa0199790 MtrunA17_Chr4g0031741 26.087 322 187 9 149 432 314 622 2.15e-23 106
Msa0199790 MtrunA17_Chr2g0290241 26.098 387 265 7 626 1004 52 425 6.75e-36 141
Msa0199790 MtrunA17_Chr2g0290241 25.078 319 193 8 149 431 88 396 4.88e-22 100
Msa0199790 MtrunA17_Chr4g0038761 28.723 376 241 10 635 1004 88 442 4.76e-35 139
Msa0199790 MtrunA17_Chr4g0038761 28.399 331 181 11 154 448 119 429 4.58e-25 109
Msa0199790 MtrunA17_Chr4g0076091 26.166 386 264 8 626 1003 170 542 6.83e-35 140
Msa0199790 MtrunA17_Chr4g0076091 23.197 319 199 8 149 431 206 514 1.00e-20 97.4
Msa0199790 MtrunA17_Chr5g0445331 27.763 389 255 10 628 1004 158 532 1.57e-34 139
Msa0199790 MtrunA17_Chr7g0238891 27.877 391 261 8 622 1004 363 740 2.09e-34 141
Msa0199790 MtrunA17_Chr7g0238891 25.633 316 183 10 150 424 399 703 8.50e-18 89.0
Msa0199790 MtrunA17_Chr7g0245601 28.877 374 239 12 635 1004 442 792 2.18e-34 142
Msa0199790 MtrunA17_Chr7g0245601 29.226 349 190 14 114 432 442 763 1.03e-23 107
Msa0199790 MtrunA17_Chr2g0328431 28.900 391 244 10 626 1003 284 653 3.13e-34 140
Msa0199790 MtrunA17_Chr2g0328431 26.183 317 177 9 153 429 323 622 5.08e-20 95.9
Msa0199790 MtrunA17_Chr4g0057291 27.792 385 255 11 632 1006 293 664 1.03e-33 139
Msa0199790 MtrunA17_Chr4g0057291 28.076 317 184 8 153 435 326 632 9.71e-25 110
Msa0199790 MtrunA17_Chr2g0328411 28.021 389 250 9 626 1003 284 653 3.97e-33 137
Msa0199790 MtrunA17_Chr2g0328411 25.949 316 181 8 153 430 323 623 2.55e-20 96.7
Msa0199790 MtrunA17_Chr5g0447691 27.219 338 222 8 632 959 178 501 4.00e-33 135
Msa0199790 MtrunA17_Chr5g0447691 24.675 308 180 9 149 417 207 501 9.66e-20 94.4
Msa0199790 MtrunA17_Chr4g0031701 27.461 386 257 9 620 994 243 616 8.60e-33 135
Msa0199790 MtrunA17_Chr4g0031701 25.301 332 192 10 130 416 261 581 8.37e-20 95.1
Msa0199790 MtrunA17_Chr4g0031721 25.823 395 254 8 626 1003 311 683 1.03e-32 135
Msa0199790 MtrunA17_Chr4g0031721 25.316 316 186 9 135 410 328 633 4.02e-20 96.3
Msa0199790 MtrunA17_Chr3g0101141 27.202 386 257 8 628 1004 172 542 1.62e-32 134
Msa0199790 MtrunA17_Chr3g0101141 24.918 305 183 8 149 417 205 499 7.06e-18 88.6
Msa0199790 MtrunA17_Chr2g0328391 26.750 400 254 9 622 1003 290 668 2.98e-32 134
Msa0199790 MtrunA17_Chr2g0328391 25.079 315 190 9 139 416 319 624 1.55e-17 87.8
Msa0199790 MtrunA17_Chr4g0031731 27.344 384 260 8 620 994 243 616 1.05e-31 132
Msa0199790 MtrunA17_Chr4g0031731 25.602 332 191 10 130 416 261 581 4.80e-19 92.4
Msa0199790 MtrunA17_Chr3g0085681 26.757 441 227 10 632 1005 26 437 1.75e-31 129
Msa0199790 MtrunA17_Chr3g0114841 25.693 397 274 9 621 1003 110 499 1.22e-30 127
Msa0199790 MtrunA17_Chr3g0114841 26.503 366 193 16 147 460 152 493 2.11e-19 93.2
Msa0199790 MtrunA17_Chr4g0039661 26.425 386 255 10 628 1004 190 555 2.25e-30 127
Msa0199790 MtrunA17_Chr4g0039661 24.633 341 203 10 124 427 196 519 5.07e-20 95.1
Msa0199790 MtrunA17_Chr2g0319091 26.042 384 262 9 628 1003 209 578 3.43e-30 127
Msa0199790 MtrunA17_Chr1g0183641 25.610 410 267 13 601 1003 98 476 1.26e-29 124
Msa0199790 MtrunA17_Chr1g0183641 28.797 316 172 13 147 431 153 446 3.85e-21 98.2
Msa0199790 MtrunA17_Chr2g0328341 25.000 388 270 8 623 1003 264 637 1.57e-29 125
Msa0199790 MtrunA17_Chr2g0328341 23.473 311 185 9 134 404 283 580 1.57e-16 84.3
Msa0199790 MtrunA17_Chr2g0328381 25.000 388 270 8 623 1003 267 640 2.45e-29 125
Msa0199790 MtrunA17_Chr2g0328381 24.759 311 181 10 134 404 286 583 4.63e-17 86.3
Msa0199790 MtrunA17_Chr3g0125811 26.209 393 244 11 632 1004 204 570 7.78e-29 122
Msa0199790 MtrunA17_Chr3g0125811 26.513 347 186 12 114 417 207 527 3.73e-20 95.9
Msa0199790 MtrunA17_Chr2g0328401 27.566 341 212 8 626 952 285 604 6.83e-28 120
Msa0199790 MtrunA17_Chr2g0328401 25.472 318 180 10 135 410 302 604 3.40e-19 93.2
Msa0199790 MtrunA17_Chr1g0159461 24.870 386 258 9 632 1004 226 592 7.21e-28 120
Msa0199790 MtrunA17_Chr1g0159461 24.496 347 193 13 114 417 229 549 3.23e-17 86.7
Msa0199790 MtrunA17_Chr5g0424131 25.185 405 266 11 620 1003 110 498 1.26e-26 115
Msa0199790 MtrunA17_Chr1g0200401 26.024 415 261 13 616 1004 65 459 1.36e-26 114
Msa0199790 MtrunA17_Chr1g0200401 24.260 338 196 11 134 429 95 414 2.39e-15 80.1
Msa0199790 MtrunA17_Chr3g0085361 25.948 343 191 7 716 1005 19 351 4.54e-25 108
Msa0199790 MtrunA17_Chr3g0085361 29.032 124 81 1 315 431 199 322 8.70e-11 64.7
Msa0199790 MtrunA17_Chr4g0038851 35.762 151 96 1 854 1004 320 469 5.19e-23 103
Msa0199790 MtrunA17_Chr4g0038851 27.336 289 179 10 592 866 1 272 9.84e-15 78.2
Msa0199790 MtrunA17_Chr4g0038851 35.821 134 75 2 311 437 312 441 1.09e-14 77.8
Msa0199790 MtrunA17_Chr2g0328371 28.017 232 157 5 720 946 13 239 1.96e-22 97.8
Msa0199790 MtrunA17_Chr2g0328371 25.238 210 123 6 225 404 34 239 2.69e-14 73.9
Msa0199790 MtrunA17_Chr8g0383981 26.617 402 247 15 618 1003 126 495 2.57e-22 102
Msa0199790 MtrunA17_Chr5g0396491 32.895 152 101 1 853 1004 328 478 3.05e-22 101
Msa0199790 MtrunA17_Chr5g0396491 28.745 247 156 7 611 852 33 264 1.69e-17 87.0
Msa0199790 MtrunA17_Chr5g0396491 34.146 123 74 1 318 433 328 450 2.64e-15 80.1
Msa0199790 MtrunA17_Chr2g0328361 24.112 394 241 10 623 1003 266 614 1.11e-21 100
Msa0199790 MtrunA17_Chr2g0328361 25.094 267 155 8 134 368 285 538 6.81e-14 75.9
Msa0199790 MtrunA17_Chr7g0236851 25.250 400 276 9 613 1003 271 656 1.36e-20 97.4
Msa0199790 MtrunA17_Chr7g0236851 28.862 246 135 8 224 438 397 633 9.76e-12 68.9
Msa0199790 MtrunA17_Chr5g0401131 23.256 387 272 9 632 1004 115 490 5.35e-19 91.7
Msa0199790 MtrunA17_Chr6g0468561 29.032 279 162 10 745 1004 401 662 5.32e-18 89.4
Msa0199790 MtrunA17_Chr6g0468561 27.066 351 195 13 121 436 305 629 7.36e-13 72.8
Msa0199790 MtrunA17_Chr4g0012071 24.740 384 259 13 627 1004 192 551 1.65e-17 87.4
Msa0199790 MtrunA17_Chr4g0012071 24.854 342 202 12 150 460 227 544 4.13e-11 67.0
Msa0199790 MtrunA17_Chr2g0329591 30.435 207 127 7 719 915 152 351 1.89e-16 83.2
Msa0199790 MtrunA17_Chr7g0230731 23.885 381 267 9 627 1004 368 728 8.33e-16 82.4
Msa0199790 MtrunA17_Chr7g0230771 23.360 381 269 10 627 1004 371 731 8.18e-15 79.3
Msa0199790 MtrunA17_Chr8g0344101 19.802 404 285 10 624 1005 215 601 1.07e-13 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0199790 AT3G03450.1 29.771 393 255 8 618 1005 170 546 8.35e-51 189
Msa0199790 AT3G03450.1 28.696 345 192 10 150 460 214 538 1.85e-31 130
Msa0199790 AT2G01570.1 29.082 392 254 7 618 1005 211 582 3.07e-50 188
Msa0199790 AT2G01570.1 26.913 379 211 12 129 471 237 585 7.64e-30 126
Msa0199790 AT1G14920.1 29.517 393 251 8 618 1005 159 530 9.27e-49 182
Msa0199790 AT1G14920.1 27.707 314 177 9 153 434 206 501 6.89e-28 120
Msa0199790 AT5G17490.1 29.049 389 249 9 622 1005 151 517 2.39e-48 181
Msa0199790 AT5G17490.1 27.479 353 200 11 150 470 191 519 3.34e-29 124
Msa0199790 AT1G66350.1 29.049 389 248 7 620 1005 144 507 4.39e-48 180
Msa0199790 AT1G66350.1 23.591 479 278 19 19 460 72 499 1.44e-26 115
Msa0199790 AT5G41920.1 29.723 397 253 11 613 1004 25 400 5.22e-40 153
Msa0199790 AT5G41920.1 30.368 326 169 13 143 432 68 371 4.83e-27 115
Msa0199790 AT1G07530.1 29.073 399 261 7 614 1003 379 764 3.38e-39 157
Msa0199790 AT1G07530.1 26.403 303 178 7 150 416 427 720 7.89e-21 99.0
Msa0199790 AT3G46600.2 30.469 384 239 10 632 1004 5 371 5.60e-39 149
Msa0199790 AT3G46600.2 27.414 321 185 9 148 431 33 342 7.95e-23 102
Msa0199790 AT3G46600.1 30.102 392 246 10 624 1004 205 579 4.46e-38 151
Msa0199790 AT3G46600.1 27.414 321 185 9 148 431 241 550 5.05e-23 105
Msa0199790 AT3G46600.3 30.102 392 246 10 624 1004 173 547 4.67e-38 151
Msa0199790 AT3G46600.3 27.414 321 185 9 148 431 209 518 1.72e-22 103
Msa0199790 AT1G55580.1 29.474 380 224 11 660 1004 75 445 8.38e-38 148
Msa0199790 AT1G55580.1 26.012 346 182 8 150 429 75 412 4.32e-24 107
Msa0199790 AT5G59450.1 30.612 392 244 12 626 1004 222 598 1.89e-37 150
Msa0199790 AT5G59450.1 28.616 318 179 10 153 431 261 569 6.07e-25 111
Msa0199790 AT4G17230.1 27.720 386 255 9 628 1004 155 525 4.43e-37 147
Msa0199790 AT4G17230.1 23.100 329 207 8 139 431 178 496 2.00e-19 93.6
Msa0199790 AT4G17230.2 27.720 386 255 9 628 1004 155 525 4.43e-37 147
Msa0199790 AT4G17230.2 23.100 329 207 8 139 431 178 496 2.00e-19 93.6
Msa0199790 AT2G29060.2 28.389 391 258 8 623 1003 276 654 1.86e-36 147
Msa0199790 AT2G29060.2 25.949 316 178 10 153 429 318 616 8.59e-20 95.5
Msa0199790 AT2G29060.1 28.389 391 258 8 623 1003 313 691 2.57e-36 147
Msa0199790 AT2G29060.1 25.949 316 178 10 153 429 355 653 7.64e-20 95.9
Msa0199790 AT2G29065.1 26.963 382 262 8 632 1003 253 627 7.18e-35 142
Msa0199790 AT2G29065.1 21.672 323 198 9 154 431 287 599 4.72e-18 89.7
Msa0199790 AT1G50420.1 26.804 485 260 15 595 1004 15 479 1.98e-34 139
Msa0199790 AT1G50420.1 30.201 149 91 3 319 460 330 472 1.24e-12 72.0
Msa0199790 AT3G54220.1 29.032 372 242 10 635 1003 297 649 3.18e-34 140
Msa0199790 AT3G54220.1 28.689 366 203 14 114 447 297 636 9.46e-25 111
Msa0199790 AT1G07520.2 26.804 388 254 10 632 1003 155 528 9.87e-34 137
Msa0199790 AT1G07520.2 23.492 315 189 10 148 416 179 487 3.15e-16 83.6
Msa0199790 AT1G07520.4 26.804 388 254 10 632 1003 155 528 9.87e-34 137
Msa0199790 AT1G07520.4 23.492 315 189 10 148 416 179 487 3.15e-16 83.6
Msa0199790 AT1G07520.1 26.804 388 254 10 632 1003 319 692 1.66e-33 139
Msa0199790 AT1G07520.1 23.492 315 189 10 148 416 343 651 2.92e-16 84.3
Msa0199790 AT1G07520.3 26.804 388 254 10 632 1003 320 693 1.69e-33 139
Msa0199790 AT1G07520.3 23.492 315 189 10 148 416 344 652 3.03e-16 84.3
Msa0199790 AT5G66770.1 27.387 398 260 10 619 1004 204 584 1.67e-32 134
Msa0199790 AT5G66770.1 25.240 313 185 9 150 427 250 548 6.48e-20 95.5
Msa0199790 AT1G63100.1 26.065 399 263 9 623 1003 244 628 2.07e-32 135
Msa0199790 AT1G63100.1 26.426 333 198 9 148 446 282 601 1.90e-27 119
Msa0199790 AT1G63100.2 26.065 399 263 9 623 1003 269 653 2.14e-32 135
Msa0199790 AT1G63100.2 26.426 333 198 9 148 446 307 626 2.01e-27 119
Msa0199790 AT5G48150.1 27.246 334 223 8 628 954 119 439 7.64e-32 131
Msa0199790 AT5G48150.1 24.333 300 179 8 149 412 152 439 5.14e-20 95.1
Msa0199790 AT5G48150.4 27.246 334 223 8 628 954 119 439 7.64e-32 131
Msa0199790 AT5G48150.4 24.333 300 179 8 149 412 152 439 5.14e-20 95.1
Msa0199790 AT5G48150.2 27.246 334 223 8 628 954 119 439 7.64e-32 131
Msa0199790 AT5G48150.2 24.333 300 179 8 149 412 152 439 5.14e-20 95.1
Msa0199790 AT5G48150.3 27.246 334 223 8 628 954 119 439 7.64e-32 131
Msa0199790 AT5G48150.3 24.333 300 179 8 149 412 152 439 5.14e-20 95.1
Msa0199790 AT1G50600.3 25.964 389 250 11 632 1004 160 526 2.74e-31 130
Msa0199790 AT1G50600.3 23.810 315 194 7 139 417 179 483 1.40e-17 87.8
Msa0199790 AT1G50600.2 26.371 383 256 9 632 1004 235 601 6.52e-31 130
Msa0199790 AT1G50600.2 24.127 315 193 8 139 417 254 558 3.17e-17 87.0
Msa0199790 AT1G50600.1 26.371 383 256 9 632 1004 231 597 6.79e-31 130
Msa0199790 AT1G50600.1 23.810 315 194 7 139 417 250 554 2.93e-17 87.0
Msa0199790 AT2G37650.2 28.070 399 248 12 622 1004 326 701 1.54e-30 129
Msa0199790 AT2G37650.2 25.676 296 174 7 154 414 370 654 5.28e-17 86.7
Msa0199790 AT2G37650.1 28.070 399 248 12 622 1004 338 713 1.54e-30 129
Msa0199790 AT2G37650.1 25.676 296 174 7 154 414 382 666 4.72e-17 86.7
Msa0199790 AT2G04890.1 24.538 379 261 8 632 1004 54 413 2.67e-30 125
Msa0199790 AT2G04890.1 25.000 304 177 9 149 417 83 370 2.74e-17 85.9
Msa0199790 AT3G50650.1 28.011 357 231 9 657 1004 203 542 4.56e-30 126
Msa0199790 AT3G50650.1 27.044 318 179 9 148 427 204 506 1.28e-20 97.4
Msa0199790 AT4G08250.1 26.420 405 269 12 612 1003 88 476 7.39e-28 119
Msa0199790 AT4G08250.1 26.140 329 186 14 179 460 152 470 2.21e-13 74.3
Msa0199790 AT1G21450.1 25.989 354 231 10 623 961 214 551 1.03e-21 101
Msa0199790 AT1G21450.1 24.451 364 210 12 97 419 212 551 1.84e-13 75.1
Msa0199790 AT2G45160.1 25.562 356 235 9 656 1004 307 639 2.25e-20 97.4
Msa0199790 AT2G45160.1 25.137 366 215 11 130 460 291 632 2.16e-14 78.2
Msa0199790 AT4G00150.1 27.318 399 223 18 626 1004 203 554 5.51e-18 89.4
Msa0199790 AT4G37650.1 21.739 391 280 10 632 1004 147 529 1.50e-16 84.7
Msa0199790 AT3G60630.1 24.918 305 207 8 711 1004 329 622 1.52e-16 85.1
Msa0199790 AT3G60630.1 25.253 297 175 11 201 460 329 615 2.97e-11 67.8
Msa0199790 AT3G49950.1 26.688 311 198 11 713 1003 107 407 3.53e-16 82.4
Msa0199790 AT5G52510.1 25.080 311 206 8 715 1004 336 640 5.65e-16 83.2

Find 131 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATCCTGTTAATGATTT+TGG 0.104811 2_1:-19157415 Msa0199790:CDS
CTTCATCCAGTTAATGATTT+TGG 0.114608 2_1:-19163153 Msa0199790:CDS
AACCATTACTATAGGGTTTA+TGG 0.150240 2_1:+19162243 None:intergenic
CACATGTGTACAAGCTTTAT+TGG 0.155746 2_1:-19156912 Msa0199790:CDS
AACCATTACTATAGGATTTA+TGG 0.158396 2_1:+19156508 None:intergenic
AATGGTCATTGTCTTCTTAT+TGG 0.198735 2_1:-19156143 Msa0199790:CDS
TAAGCGCGTGGTTCATTATT+TGG 0.210057 2_1:-19157104 Msa0199790:CDS
TAATGAACCACGCGCTTAAC+TGG 0.226146 2_1:+19162844 None:intergenic
TTTCATTTCACTAAGTTTCT+TGG 0.235784 2_1:+19157723 None:intergenic
CTTCAAAGTGTCTATGTTTC+CGG 0.238242 2_1:+19162486 None:intergenic
TAATGAACCACGCGCTTAAC+CGG 0.242805 2_1:+19157109 None:intergenic
ATTCTAGAGTCAATGTATTT+TGG 0.251777 2_1:-19156356 Msa0199790:CDS
GAGTCTCTTTGCTCTAATTT+TGG 0.258364 2_1:-19163438 Msa0199790:CDS
TTTCATTTCACCAAGTTTCT+TGG 0.264601 2_1:+19163509 None:intergenic
TTGATTCTTAATCACCCTTT+TGG 0.265653 2_1:-19157280 Msa0199790:CDS
GTTGACATATTGAAGAATTA+TGG 0.268072 2_1:-19157481 Msa0199790:CDS
CAAACAGAAACAGAGTTAAT+TGG 0.268686 2_1:+19156107 None:intergenic
TTGATTCCTAATCACCCTTT+TGG 0.281331 2_1:-19163021 Msa0199790:CDS
AGATCCTTGCTAACCTCTTC+AGG 0.285294 2_1:+19156992 None:intergenic
GAAACGGTTCACAAAAGATT+TGG 0.292025 2_1:+19156457 None:intergenic
TTGTCCATTGTAACCCTTTA+CGG 0.295916 2_1:+19162578 None:intergenic
ATAACTATATCGAACGAAAA+AGG 0.330493 2_1:+19156671 None:intergenic
CAATTAACTCTGTTTCTGTT+TGG 0.337936 2_1:-19156106 Msa0199790:CDS
TCGATTGAAGTGCTTGCATT+AGG 0.355406 2_1:+19156819 None:intergenic
TCGATTGAAGTGCTTGCATT+AGG 0.355406 2_1:+19162554 None:intergenic
CCGTGACAACCATTACTATA+GGG 0.362305 2_1:+19162236 None:intergenic
CTGTTTCTTTGTCGATTGTT+TGG 0.363324 2_1:+19157068 None:intergenic
ATCAAACCAAAATCATTAAC+TGG 0.365703 2_1:+19163147 None:intergenic
ACTAAACCAAAATCATTAAC+AGG 0.373883 2_1:+19157409 None:intergenic
ACCTCTTGAGGATCAAATAA+AGG 0.383647 2_1:+19162739 None:intergenic
TCGGCGACAACCATTACTAT+AGG 0.401197 2_1:+19156500 None:intergenic
GACAAACAATATGCAAAAGA+TGG 0.402851 2_1:-19162764 Msa0199790:CDS
TCTTGCACATTTGATATGAA+TGG 0.412387 2_1:-19161896 Msa0199790:intron
CAAAGAATCGACAAAGAAAC+AGG 0.414068 2_1:-19162802 Msa0199790:CDS
GTCATTGTCTTCTTATTGGA+TGG 0.423148 2_1:-19156139 Msa0199790:CDS
CAAACAATCGACAAAGAAAC+AGG 0.431920 2_1:-19157067 Msa0199790:CDS
GATTCTTTGTTGAAGAGCTT+CGG 0.433882 2_1:+19162816 None:intergenic
ATGATTGTTTCGAGTTTGTC+TGG 0.434303 2_1:+19156545 None:intergenic
GTCTTTGTATCAAGCTGAAT+TGG 0.435480 2_1:-19156210 Msa0199790:CDS
GTCTTTGTATCAAGCTGAAT+TGG 0.435480 2_1:-19161945 Msa0199790:CDS
GATGTTGGTGATGATACTTT+AGG 0.436439 2_1:+19157647 None:intergenic
AGGATTTCTCCTTCATCATC+AGG 0.437722 2_1:+19157436 None:intergenic
TCTTCGTCGCAATCTGCATC+AGG 0.438613 2_1:-19163045 Msa0199790:CDS
GGAATGTAAAGATTGATGTT+TGG 0.438820 2_1:-19156283 Msa0199790:CDS
TAATTCTTCAATATGTCAAC+TGG 0.440835 2_1:+19157484 None:intergenic
AAGGAGATTGGTAGAATGAT+TGG 0.442242 2_1:+19157512 None:intergenic
TCGTAAAGCGCGATCATGGC+CGG 0.445620 2_1:+19156965 None:intergenic
ATTGATCTCGAAATTCGAAA+AGG 0.450113 2_1:-19156857 Msa0199790:CDS
AGGAATATTGTGGCTGAAGA+AGG 0.454210 2_1:-19156323 Msa0199790:CDS
CTCTCATGATTGTTTCAAGT+TGG 0.456214 2_1:+19162275 None:intergenic
ATCTTCGTAAAGCGCGATCA+TGG 0.461018 2_1:+19156961 None:intergenic
AGGAAATCATCTTCTTCTGA+TGG 0.462485 2_1:+19163399 None:intergenic
AGGAATATTGTGGCTGAAGA+AGG 0.463268 2_1:-19162058 Msa0199790:CDS
AATATGTCAACTGGTGCTAA+AGG 0.468976 2_1:+19157493 None:intergenic
CAAAATCATTAACTGGATGA+AGG 0.470878 2_1:+19163154 None:intergenic
ATCCAACAACATGCAAAAGA+TGG 0.471694 2_1:-19157029 Msa0199790:CDS
AAATTCGAAAAGGGTGTCAA+TGG 0.472001 2_1:-19156847 Msa0199790:CDS
GAAGATATCATGAAGATAGC+TGG 0.473521 2_1:-19163090 Msa0199790:CDS
TCCGTGACAACCATTACTAT+AGG 0.473792 2_1:+19162235 None:intergenic
TGTCTTCTTATTGGATGGAA+AGG 0.484516 2_1:-19156134 Msa0199790:CDS
TCTTGCACATTTGATATGAA+TGG 0.485082 2_1:-19156161 Msa0199790:CDS
AGATCCTTGGTTACCTCTTG+AGG 0.485987 2_1:+19162727 None:intergenic
TCTTCGTCGGAATCTGCATC+AGG 0.487554 2_1:-19157304 Msa0199790:CDS
ATTGTGATTAGCTTCATTCT+CGG 0.488910 2_1:+19156481 None:intergenic
TTGATCTCGAAATCCGTAAA+GGG 0.491083 2_1:-19162591 Msa0199790:CDS
ATAGAGATCATGAAGCTAGC+TGG 0.499759 2_1:-19157349 Msa0199790:CDS
AAGCGCTGGATTTAGATCCT+TGG 0.500832 2_1:+19162714 None:intergenic
AATATTGAAACTTGACTGAA+TGG 0.501754 2_1:+19156935 None:intergenic
CCCTATAGTAATGGTTGTCA+CGG 0.506352 2_1:-19162236 Msa0199790:CDS
TTTGTTATATATAGAGAATG+TGG 0.509515 2_1:-19163685 None:intergenic
CGTAAAGCGCGATCATGGCC+GGG 0.510453 2_1:+19156966 None:intergenic
GGACACTGGTAAAAGATTGA+AGG 0.513135 2_1:-19156717 Msa0199790:CDS
CAAATCGAGTCTTCGAAGAC+AGG 0.515563 2_1:-19157136 Msa0199790:CDS
GATATGATTCTTGTTGATGT+TGG 0.515959 2_1:+19157632 None:intergenic
TTGATCTCGAAATTCGAAAA+GGG 0.518620 2_1:-19156856 Msa0199790:CDS
GTCTTCGAAGACAGGTAACC+CGG 0.520861 2_1:-19157128 Msa0199790:CDS
CAACTGGTGCTAAAGGAGAT+TGG 0.521179 2_1:+19157500 None:intergenic
CCTTGAGCTTCTAAAGATAA+CGG 0.522684 2_1:-19162518 Msa0199790:CDS
AATGAACCACGCGCTTAACC+GGG 0.523855 2_1:+19157110 None:intergenic
CAAAATCATTAACAGGATGA+AGG 0.525196 2_1:+19157416 None:intergenic
CCGTTATCTTTAGAAGCTCA+AGG 0.526773 2_1:+19162518 None:intergenic
CGTTATCTTTAGAAGCTCAA+GGG 0.529843 2_1:+19162519 None:intergenic
TGACACTGGTAAAAGATTGA+AGG 0.529885 2_1:-19162452 Msa0199790:CDS
AAAATCATTAACTGGATGAA+GGG 0.532257 2_1:+19163155 None:intergenic
ATTGATCTCGAAATCCGTAA+AGG 0.532305 2_1:-19162592 Msa0199790:CDS
AAGATAACGGCTATTGTGAC+CGG 0.536013 2_1:-19162505 Msa0199790:CDS
AACCATAAATCCTATAGTAA+TGG 0.541375 2_1:-19156510 Msa0199790:CDS
AACCATAAACCCTATAGTAA+TGG 0.546098 2_1:-19162245 Msa0199790:CDS
TTTGTATCAAGCTGAATTGG+TGG 0.548313 2_1:-19156207 Msa0199790:CDS
TTTGTATCAAGCTGAATTGG+TGG 0.548313 2_1:-19161942 Msa0199790:CDS
ACAAACAATATGCAAAAGAT+GGG 0.551770 2_1:-19162763 Msa0199790:CDS
AAGAGGTTACTACCTGATGA+AGG 0.555954 2_1:-19163183 Msa0199790:intron
GAAGATCTAGGAGACTGTAA+TGG 0.557911 2_1:-19163465 Msa0199790:CDS
ATCTTTATTTGATCCTGAAG+AGG 0.563321 2_1:-19157005 Msa0199790:CDS
TTTCACAAGATTTGGAATGG+TGG 0.567481 2_1:-19156252 Msa0199790:CDS
ACCTTTATTTGATCCTCAAG+AGG 0.572203 2_1:-19162740 Msa0199790:CDS
CATACAATCATCATCTTCGT+CGG 0.575813 2_1:-19157317 Msa0199790:CDS
AAGGAGCTGAAAGAAAGAGT+AGG 0.577054 2_1:-19156304 Msa0199790:CDS
AATGAACCACGCGCTTAACT+GGG 0.580982 2_1:+19162845 None:intergenic
GAAGATCTAGGAGACTATCA+TGG 0.581000 2_1:-19157679 Msa0199790:CDS
AGACTCTGAGGAAACTGTTG+TGG 0.581099 2_1:-19162341 Msa0199790:CDS
AGGTTATTACCTGATGATGA+AGG 0.583580 2_1:-19157445 Msa0199790:CDS
TCATGGTATTAGGAATATTG+TGG 0.583709 2_1:-19162068 Msa0199790:CDS
AGTGAACCATGTCAAAGTGT+AGG 0.587676 2_1:+19157587 None:intergenic
TGATCCTGAAGAGGTTAGCA+AGG 0.599740 2_1:-19156996 Msa0199790:CDS
TTAGCTTGTGCTGAGAAAGT+CGG 0.613798 2_1:-19157196 Msa0199790:CDS
TTAGCTTGTGCTGAGAAAGT+CGG 0.613798 2_1:-19162937 Msa0199790:intron
TGATAACCTACACTTTGACA+TGG 0.617264 2_1:-19157593 Msa0199790:CDS
GTTATCTTTAGAAGCTCGAG+TGG 0.620777 2_1:+19156785 None:intergenic
TCATGAAGCTAGCTGGAACA+AGG 0.621798 2_1:-19157342 Msa0199790:CDS
GTGGCTAAAAGATTTCCTTG+TGG 0.623390 2_1:-19161923 Msa0199790:CDS
AAATCCGTAAAGGGTTACAA+TGG 0.629230 2_1:-19162582 Msa0199790:CDS
GTTATCTTTAGAAGCTCAAG+GGG 0.629469 2_1:+19162520 None:intergenic
CACTTCGAAGCATATAGTTG+AGG 0.629728 2_1:-19156738 Msa0199790:CDS
AGGTAACCCGGTTAAGCGCG+TGG 0.630069 2_1:-19157116 Msa0199790:CDS
AAGCATATAGTTGATGACAC+TGG 0.630401 2_1:-19162466 Msa0199790:CDS
TCATGAAGATAGCTGGAACA+AGG 0.635820 2_1:-19163083 Msa0199790:CDS
TCATGGAATTAGGAATATTG+TGG 0.639538 2_1:-19156333 Msa0199790:CDS
ATATTGAAGAATTATGGCAA+AGG 0.640071 2_1:-19157475 Msa0199790:CDS
AAGATAACAGCTATTGAGAG+CGG 0.640580 2_1:-19156770 Msa0199790:CDS
AAGCATATAGTTGAGGACAC+TGG 0.647935 2_1:-19156731 Msa0199790:CDS
GGTTAGCAAGGATCTAAACC+CGG 0.656322 2_1:-19156984 Msa0199790:CDS
GAAATGTGAAGATTGATGTG+TGG 0.658264 2_1:-19162018 Msa0199790:CDS
ATTATGGCAAAGGATTCAAG+AGG 0.672484 2_1:-19157465 Msa0199790:CDS
TGATCCTCAAGAGGTAACCA+AGG 0.673485 2_1:-19162731 Msa0199790:CDS
GTGGCTAAAAGATTTCCTTG+TGG 0.676872 2_1:-19156188 Msa0199790:CDS
AGGTAACCCAGTTAAGCGCG+TGG 0.690106 2_1:-19162851 Msa0199790:CDS
AGATTCGGAAGAAACAGTCG+CGG 0.728949 2_1:-19156606 Msa0199790:CDS
AATGTGCAAGAACATCCACA+AGG 0.743242 2_1:+19156173 None:intergenic
AATGTGCAAGAATTTCCACA+AGG 0.746520 2_1:+19161908 None:intergenic
TTATCTTTAGAAGCTCAAGG+GGG 0.784856 2_1:+19162521 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTATATTAAAAT+AGG - chr2_1:19159145-19159164 Msa0199790:intron 0.0%
!!! AGGATTTTTTTTTTTTTTAA+AGG - chr2_1:19158200-19158219 Msa0199790:intron 10.0%
!!! GTATAAATTTTATTTTTCAA+GGG + chr2_1:19158778-19158797 None:intergenic 10.0%
!!! AGTATAAATTTTATTTTTCA+AGG + chr2_1:19158779-19158798 None:intergenic 10.0%
!!! ACATATTCTAATTTTATTTT+GGG - chr2_1:19159043-19159062 Msa0199790:intron 10.0%
!!! ATTATAGAAAAATTTGTTTA+AGG - chr2_1:19160058-19160077 Msa0199790:intron 10.0%
!!! AACATTGAAATTTTACAAAA+TGG + chr2_1:19157101-19157120 None:intergenic 15.0%
!! ATAATTGTATCAAATACAAA+AGG + chr2_1:19157365-19157384 None:intergenic 15.0%
!! ATTTGATACAATTATTGTAT+CGG - chr2_1:19157370-19157389 Msa0199790:CDS 15.0%
!!! TATTACTTTTAATACATGAT+AGG + chr2_1:19158128-19158147 None:intergenic 15.0%
!!! CAAGTATTAAAAGTAAATTT+TGG - chr2_1:19158245-19158264 Msa0199790:intron 15.0%
!! AGTGCATATTTAATTATTAA+GGG + chr2_1:19158838-19158857 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG + chr2_1:19158839-19158858 None:intergenic 15.0%
!!! ATGAATTAATTTTTCTTGAA+TGG + chr2_1:19158917-19158936 None:intergenic 15.0%
!!! CACATATTCTAATTTTATTT+TGG - chr2_1:19159042-19159061 Msa0199790:intron 15.0%
!!! TTGTTTCATATTTTACAATA+GGG - chr2_1:19159066-19159085 Msa0199790:intron 15.0%
!! ACTCAAAAAATTATGTATAT+AGG - chr2_1:19159402-19159421 Msa0199790:intron 15.0%
!!! AGATAAATTCAAGTTAATTA+AGG - chr2_1:19159500-19159519 Msa0199790:intron 15.0%
!! CTATAATAATGTTATATTGT+TGG + chr2_1:19160045-19160064 None:intergenic 15.0%
!!! TCAAATAATCTAAAACTTTT+TGG + chr2_1:19160230-19160249 None:intergenic 15.0%
!! CTGATATATTTCATAAAAAA+AGG + chr2_1:19161154-19161173 None:intergenic 15.0%
!!! AAATTAATTTTGATACTTCT+TGG - chr2_1:19161224-19161243 Msa0199790:intron 15.0%
!! ATATAATGCACTTAATAAAA+TGG - chr2_1:19161365-19161384 Msa0199790:intron 15.0%
!! TATAATGCACTTAATAAAAT+GGG - chr2_1:19161366-19161385 Msa0199790:intron 15.0%
!!! TAACACTTATTCTAAAAAAA+AGG - chr2_1:19161688-19161707 Msa0199790:intron 15.0%
!!! AAACTTTTCTTTAGTATTAT+TGG + chr2_1:19161927-19161946 None:intergenic 15.0%
!!! ATTGAAACTAACTTTTCTTT+CGG + chr2_1:19156148-19156167 None:intergenic 20.0%
!!! AAAGAAAAGTTAGTTTCAAT+TGG - chr2_1:19156148-19156167 Msa0199790:CDS 20.0%
!!! TTCATCCAATGATATTTTTT+TGG - chr2_1:19156232-19156251 Msa0199790:CDS 20.0%
!!! TCATCCAATGATATTTTTTT+GGG - chr2_1:19156233-19156252 Msa0199790:CDS 20.0%
!! ATAGTAATGATAAGAGTTAA+AGG + chr2_1:19158164-19158183 None:intergenic 20.0%
!!! CTATTTTCAACTTAAGATAT+AGG - chr2_1:19158180-19158199 Msa0199790:intron 20.0%
!!! TGTATATTTTAACATAAGAG+AGG + chr2_1:19158748-19158767 None:intergenic 20.0%
!!! TAAATTTTATTTTTCAAGGG+AGG + chr2_1:19158775-19158794 None:intergenic 20.0%
!!! AATTAATTTTTCTTGAATGG+TGG + chr2_1:19158914-19158933 None:intergenic 20.0%
!!! GTTGTTTCATATTTTACAAT+AGG - chr2_1:19159065-19159084 Msa0199790:intron 20.0%
!!! TCTAATAAGTTTTGAATAAG+AGG - chr2_1:19159331-19159350 Msa0199790:intron 20.0%
!!! CTAATAAGTTTTGAATAAGA+GGG - chr2_1:19159332-19159351 Msa0199790:intron 20.0%
!!! TAATAAGTTTTGAATAAGAG+GGG - chr2_1:19159333-19159352 Msa0199790:intron 20.0%
!!! TAAATTCAAGTTAATTAAGG+TGG - chr2_1:19159503-19159522 Msa0199790:intron 20.0%
!!! TCTTTTACTATGTTTTCATT+TGG - chr2_1:19159664-19159683 Msa0199790:intron 20.0%
!! ATTTAAACCATTAAGAATCA+TGG + chr2_1:19159758-19159777 None:intergenic 20.0%
!! TATTATTGTTGTCATTGAAA+AGG + chr2_1:19159987-19160006 None:intergenic 20.0%
!!! TAAAGAGAATAGAAGATTTT+GGG + chr2_1:19160114-19160133 None:intergenic 20.0%
!!! ATAAAGAGAATAGAAGATTT+TGG + chr2_1:19160115-19160134 None:intergenic 20.0%
!!! GTTTTAGATTATTTGATCTT+TGG - chr2_1:19160234-19160253 Msa0199790:intron 20.0%
!!! TTTTTTTTACAATGCTAAAG+AGG - chr2_1:19160274-19160293 Msa0199790:intron 20.0%
!!! GTGAACATGATAATTTTTTT+TGG - chr2_1:19160359-19160378 Msa0199790:intron 20.0%
!! TAAGTCAAATGATATTTGAT+TGG + chr2_1:19160637-19160656 None:intergenic 20.0%
!!! ATCAAATATCATTTGACTTA+TGG - chr2_1:19160637-19160656 Msa0199790:intron 20.0%
!! TAGAGAGATATAGAAAAAAA+AGG - chr2_1:19160701-19160720 Msa0199790:intron 20.0%
!!! TAACGATCGATTATTTTAAA+GGG + chr2_1:19160938-19160957 None:intergenic 20.0%
!!! ATAACGATCGATTATTTTAA+AGG + chr2_1:19160939-19160958 None:intergenic 20.0%
!!! TATATTTTTTTTTGCGATGA+TGG + chr2_1:19161045-19161064 None:intergenic 20.0%
!! AAAAAATATACATTGAAGTC+TGG - chr2_1:19161055-19161074 Msa0199790:intron 20.0%
!! ATAATGCACTTAATAAAATG+GGG - chr2_1:19161367-19161386 Msa0199790:intron 20.0%
!!! ACTTATTTTATTTTAGGCTA+AGG + chr2_1:19161405-19161424 None:intergenic 20.0%
!!! CCTTGAACTTATTTTATTTT+AGG + chr2_1:19161411-19161430 None:intergenic 20.0%
!! CCTAAAATAAAATAAGTTCA+AGG - chr2_1:19161408-19161427 Msa0199790:intron 20.0%
!!! TTTTGAACTTGGTTTAATTT+GGG + chr2_1:19161566-19161585 None:intergenic 20.0%
!!! ATTTTGAACTTGGTTTAATT+TGG + chr2_1:19161567-19161586 None:intergenic 20.0%
!!! GAATTTTAACATTTTGAACT+TGG + chr2_1:19161577-19161596 None:intergenic 20.0%
!!! TATTCTAAAAAAAAGGATCA+AGG - chr2_1:19161695-19161714 Msa0199790:intron 20.0%
!!! TTTGTTGATTAAGTGAATTA+AGG + chr2_1:19161784-19161803 None:intergenic 20.0%
!! TTAATTCACTTAATCAACAA+AGG - chr2_1:19161783-19161802 Msa0199790:intron 20.0%
!!! TTCATCCAATGATATTTTTT+GGG - chr2_1:19156232-19156251 Msa0199790:CDS 20.0%
! GTTTCCCAAAAAAATATCAT+TGG + chr2_1:19156240-19156259 None:intergenic 25.0%
! TAGTTCTTCAATATATCAAC+TGG + chr2_1:19156552-19156571 None:intergenic 25.0%
! GTTGATATATTGAAGAACTA+TGG - chr2_1:19156552-19156571 Msa0199790:CDS 25.0%
! AAAATCATTAACTGGATGAA+GGG + chr2_1:19156616-19156635 None:intergenic 25.0%
! ATCAAACCAAAATCATTAAC+TGG + chr2_1:19156624-19156643 None:intergenic 25.0%
! ACAAACAATATGCAAAAGAT+GGG - chr2_1:19157005-19157024 Msa0199790:CDS 25.0%
!!! AAAAAAGTGCTTTGATGAAA+CGG + chr2_1:19157595-19157614 None:intergenic 25.0%
!!! TGTATTTTAGTCATGGTATT+AGG - chr2_1:19157690-19157709 Msa0199790:CDS 25.0%
!! ATTTTTCACAAGATTTGGAA+TGG - chr2_1:19157778-19157797 Msa0199790:intron 25.0%
! TCAACAAGAATATGCTAATT+AGG - chr2_1:19158389-19158408 Msa0199790:intron 25.0%
! GTAATTCAAGAATCTTTGAA+GGG + chr2_1:19158717-19158736 None:intergenic 25.0%
! TGTAATTCAAGAATCTTTGA+AGG + chr2_1:19158718-19158737 None:intergenic 25.0%
!!! TATTTTAACATAAGAGAGGA+GGG + chr2_1:19158744-19158763 None:intergenic 25.0%
!!! ATATTTTAACATAAGAGAGG+AGG + chr2_1:19158745-19158764 None:intergenic 25.0%
! TATTTAATTATTAAGGGAGG+AGG + chr2_1:19158832-19158851 None:intergenic 25.0%
! GCATATTTAATTATTAAGGG+AGG + chr2_1:19158835-19158854 None:intergenic 25.0%
! CTTCGAAAAAATAGTATTGT+GGG + chr2_1:19159171-19159190 None:intergenic 25.0%
! ACTTCGAAAAAATAGTATTG+TGG + chr2_1:19159172-19159191 None:intergenic 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG - chr2_1:19159237-19159256 Msa0199790:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG - chr2_1:19159238-19159257 Msa0199790:intron 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG - chr2_1:19159239-19159258 Msa0199790:intron 25.0%
! CGAAAGGTTTAAATCTTTAA+GGG + chr2_1:19159449-19159468 None:intergenic 25.0%
! TCGAAAGGTTTAAATCTTTA+AGG + chr2_1:19159450-19159469 None:intergenic 25.0%
!! AGTGTTTCTGATAAAATACT+TGG - chr2_1:19159476-19159495 Msa0199790:intron 25.0%
! TAGAGTTAATTACTCACTTT+AGG - chr2_1:19159545-19159564 Msa0199790:intron 25.0%
! TATAATTACTAGCGAAAAGA+CGG - chr2_1:19159802-19159821 Msa0199790:intron 25.0%
!! TGATCTTTGGTTTATTACTT+TGG - chr2_1:19160247-19160266 Msa0199790:intron 25.0%
! TTGAAAGATATCAACACAAA+GGG - chr2_1:19160415-19160434 Msa0199790:intron 25.0%
!!! AAATGATATTTGATTGGCTT+TGG + chr2_1:19160631-19160650 None:intergenic 25.0%
! GATACAAAGTCAAAATTTGA+AGG + chr2_1:19160888-19160907 None:intergenic 25.0%
!!! AATTTTGACTTTGTATCACT+CGG - chr2_1:19160891-19160910 Msa0199790:intron 25.0%
!! ATGGTAATGAGATAAAAGTT+CGG + chr2_1:19161026-19161045 None:intergenic 25.0%
! ACAAGATTGTGATAATTTAG+TGG + chr2_1:19161127-19161146 None:intergenic 25.0%
!!! TTTGAACTTGGTTTAATTTG+GGG + chr2_1:19161565-19161584 None:intergenic 25.0%
! TCAAAATGTTAAAATTCAGC+CGG - chr2_1:19161580-19161599 Msa0199790:intron 25.0%
!! AAGTTTGTTTCAATTTGTGA+TGG - chr2_1:19161941-19161960 Msa0199790:CDS 25.0%
!!! GTTCATCCAATGATATTTTT+TGG - chr2_1:19156231-19156250 Msa0199790:CDS 25.0%
! TTTCATTTCACTAAGTTTCT+TGG + chr2_1:19162048-19162067 None:intergenic 25.0%
!! TAAAGTGGAAGAATTCTTTT+AGG + chr2_1:19162221-19162240 None:intergenic 25.0%
! TAATTCTTCAATATGTCAAC+TGG + chr2_1:19162287-19162306 None:intergenic 25.0%
! GTTGACATATTGAAGAATTA+TGG - chr2_1:19162287-19162306 Msa0199790:CDS 25.0%
! ATATTGAAGAATTATGGCAA+AGG - chr2_1:19162293-19162312 Msa0199790:CDS 25.0%
! ACTAAACCAAAATCATTAAC+AGG + chr2_1:19162362-19162381 None:intergenic 25.0%
! AATATTGAAACTTGACTGAA+TGG + chr2_1:19162836-19162855 None:intergenic 25.0%
! ATAACTATATCGAACGAAAA+AGG + chr2_1:19163100-19163119 None:intergenic 25.0%
!!! AGATCTTTTCAAGATAGATT+CGG - chr2_1:19163147-19163166 Msa0199790:CDS 25.0%
! AACCATAAATCCTATAGTAA+TGG - chr2_1:19163258-19163277 Msa0199790:intron 25.0%
! AACCATTACTATAGGATTTA+TGG + chr2_1:19163263-19163282 None:intergenic 25.0%
!!! TGTTTTGAGAATTGTATGAA+AGG - chr2_1:19163370-19163389 Msa0199790:intron 25.0%
!!! ATTCTAGAGTCAATGTATTT+TGG - chr2_1:19157677-19157696 Msa0199790:CDS 25.0%
!! ATTTTTCACAAGATTTGGAA+TGG - chr2_1:19157778-19157797 Msa0199790:intron 25.0%
! AAGTTAGTTTCAATTGGTGA+TGG - chr2_1:19156154-19156173 Msa0199790:CDS 30.0%
! ATGGAAAACTTGTGCAATTT+TGG - chr2_1:19156173-19156192 Msa0199790:CDS 30.0%
TTTCATTTCACCAAGTTTCT+TGG + chr2_1:19156262-19156281 None:intergenic 30.0%
! TTTTCTGTAGAAGAAGATCT+AGG - chr2_1:19156291-19156310 Msa0199790:CDS 30.0%
AAGGAATTTGGTAGAATTGT+TGG + chr2_1:19156524-19156543 None:intergenic 30.0%
! AATATATCAACTGGTGCTAA+AGG + chr2_1:19156543-19156562 None:intergenic 30.0%
CAAAATCATTAACTGGATGA+AGG + chr2_1:19156617-19156636 None:intergenic 30.0%
! CTTCATCCAGTTAATGATTT+TGG - chr2_1:19156615-19156634 Msa0199790:CDS 30.0%
CAGAGAAACAAAAACCAAAA+GGG + chr2_1:19156764-19156783 None:intergenic 30.0%
GACAAACAATATGCAAAAGA+TGG - chr2_1:19157004-19157023 Msa0199790:CDS 30.0%
AACCATAAACCCTATAGTAA+TGG - chr2_1:19157523-19157542 Msa0199790:CDS 30.0%
AACCATTACTATAGGGTTTA+TGG + chr2_1:19157528-19157547 None:intergenic 30.0%
!! TGCATTTTTCGATAGTTTTG+AGG - chr2_1:19157622-19157641 Msa0199790:CDS 30.0%
!!! AGTTTTGAGGATTGTATGAA+AGG - chr2_1:19157635-19157654 Msa0199790:CDS 30.0%
!!! GAGTCAATGTATTTTAGTCA+TGG - chr2_1:19157683-19157702 Msa0199790:CDS 30.0%
TCATGGTATTAGGAATATTG+TGG - chr2_1:19157700-19157719 Msa0199790:CDS 30.0%
!! AGAGCATTTTTCACAAGATT+TGG - chr2_1:19157773-19157792 Msa0199790:intron 30.0%
TCTTGCACATTTGATATGAA+TGG - chr2_1:19157872-19157891 Msa0199790:intron 30.0%
CAAACAGAAACAGAGTTAAT+TGG + chr2_1:19157929-19157948 None:intergenic 30.0%
!! CAATTAACTCTGTTTCTGTT+TGG - chr2_1:19157927-19157946 Msa0199790:intron 30.0%
TTGGAAATTCCTTTGATCAT+TGG - chr2_1:19157946-19157965 Msa0199790:intron 30.0%
CAACTAACTACACATGTATT+TGG + chr2_1:19158003-19158022 None:intergenic 30.0%
ATTTAGTGTATGACTGTCAT+AGG + chr2_1:19158504-19158523 None:intergenic 30.0%
AAACCTTAAATCACCAAACT+GGG - chr2_1:19158531-19158550 Msa0199790:intron 30.0%
TTGCAAGAGAAATATCTTGT+TGG + chr2_1:19158568-19158587 None:intergenic 30.0%
!!! TGCGGTTTTTTAAGAGTTAT+GGG + chr2_1:19158615-19158634 None:intergenic 30.0%
!! ATTTTAACATAAGAGAGGAG+GGG + chr2_1:19158743-19158762 None:intergenic 30.0%
ATGTAATTCAAGCTTCTCTT+AGG - chr2_1:19159268-19159287 Msa0199790:intron 30.0%
TGTAATTCAAGCTTCTCTTA+GGG - chr2_1:19159269-19159288 Msa0199790:intron 30.0%
ATTTATGATCTTTCTCCCTT+CGG - chr2_1:19159730-19159749 Msa0199790:intron 30.0%
CGTTAGCACAATAAAAAGAA+CGG + chr2_1:19159838-19159857 None:intergenic 30.0%
ACTGGGAAAAAGATTAAACT+AGG - chr2_1:19160312-19160331 Msa0199790:intron 30.0%
!! GTGTTGATATCTTTCAAGTT+TGG + chr2_1:19160412-19160431 None:intergenic 30.0%
CTTGAAAGATATCAACACAA+AGG - chr2_1:19160414-19160433 Msa0199790:intron 30.0%
TGTTGATGTTTGATTGTCAA+TGG - chr2_1:19160504-19160523 Msa0199790:intron 30.0%
!!! TATTGGTCTTTAACCCTTTT+TGG + chr2_1:19160530-19160549 None:intergenic 30.0%
TTCATGGTCATTGAAGATAT+TGG + chr2_1:19160547-19160566 None:intergenic 30.0%
!! TTGGTTTTCTTCTCTTGATT+TGG + chr2_1:19160612-19160631 None:intergenic 30.0%
ATTGTATATCCTCTAAGTTG+CGG - chr2_1:19160766-19160785 Msa0199790:intron 30.0%
TCGGTCAACATTCAAAAAAT+TGG + chr2_1:19161007-19161026 None:intergenic 30.0%
AAATGGAGATTGATACTTTG+CGG + chr2_1:19161268-19161287 None:intergenic 30.0%
GTTCAGTTTCAATATAGTTG+AGG - chr2_1:19161986-19162005 Msa0199790:CDS 30.0%
GGTTTCCCAAAAAATATCAT+TGG + chr2_1:19162027-19162046 None:intergenic 30.0%
GATATGATTCTTGTTGATGT+TGG + chr2_1:19162139-19162158 None:intergenic 30.0%
TCCACTTTATGACACAAAAA+AGG - chr2_1:19162232-19162251 Msa0199790:CDS 30.0%
!!! TCCTTTTTTGTGTCATAAAG+TGG + chr2_1:19162236-19162255 None:intergenic 30.0%
CAAAATCATTAACAGGATGA+AGG + chr2_1:19162355-19162374 None:intergenic 30.0%
! CTTCATCCTGTTAATGATTT+TGG - chr2_1:19162353-19162372 Msa0199790:intron 30.0%
! TTGATTCTTAATCACCCTTT+TGG - chr2_1:19162488-19162507 Msa0199790:CDS 30.0%
ACGAGAAAGAAAAACCAAAA+GGG + chr2_1:19162505-19162524 None:intergenic 30.0%
! ATCTTTATTTGATCCTGAAG+AGG - chr2_1:19162763-19162782 Msa0199790:CDS 30.0%
ATTGATCTCGAAATTCGAAA+AGG - chr2_1:19162911-19162930 Msa0199790:CDS 30.0%
TTGATCTCGAAATTCGAAAA+GGG - chr2_1:19162912-19162931 Msa0199790:CDS 30.0%
!! ATTGTGATTAGCTTCATTCT+CGG + chr2_1:19163290-19163309 None:intergenic 30.0%
!! AAAAAAGTGCTTCGATGAAA+CGG + chr2_1:19163330-19163349 None:intergenic 30.0%
!!! TGTATTTTGGTCATGGAATT+AGG - chr2_1:19163425-19163444 Msa0199790:CDS 30.0%
TCATGGAATTAGGAATATTG+TGG - chr2_1:19163435-19163454 Msa0199790:CDS 30.0%
GGAATGTAAAGATTGATGTT+TGG - chr2_1:19163485-19163504 Msa0199790:CDS 30.0%
!! AGAGCATTTTTCACAAGATT+TGG - chr2_1:19157773-19157792 Msa0199790:intron 30.0%
TCTTGCACATTTGATATGAA+TGG - chr2_1:19157872-19157891 Msa0199790:intron 30.0%
AATGGTCATTGTCTTCTTAT+TGG - chr2_1:19163625-19163644 Msa0199790:intron 30.0%
CAAACAGAAACAGAGTTAAT+TGG + chr2_1:19157929-19157948 None:intergenic 30.0%
!! CAATTAACTCTGTTTCTGTT+TGG - chr2_1:19157927-19157946 Msa0199790:intron 30.0%
!! TTTTGGGAAACCAAGAAACT+TGG - chr2_1:19156249-19156268 Msa0199790:CDS 35.0%
! GAGTCTCTTTGCTCTAATTT+TGG - chr2_1:19156330-19156349 Msa0199790:CDS 35.0%
AGGAAATCATCTTCTTCTGA+TGG + chr2_1:19156372-19156391 None:intergenic 35.0%
!! GTTCTTGGTGATGATACTTT+AGG + chr2_1:19156392-19156411 None:intergenic 35.0%
AAGTATCATCACCAAGAACA+AGG - chr2_1:19156393-19156412 Msa0199790:CDS 35.0%
CTTGATATGATCCTTGTTCT+TGG + chr2_1:19156407-19156426 None:intergenic 35.0%
TGATAACCTACACTTTGACA+TGG - chr2_1:19156440-19156459 Msa0199790:CDS 35.0%
AATGAACCATGTCAAAGTGT+AGG + chr2_1:19156449-19156468 None:intergenic 35.0%
! TTTTTGTGTCACAAAGTGGA+GGG + chr2_1:19156497-19156516 None:intergenic 35.0%
!!! TTTTTTGTGTCACAAAGTGG+AGG + chr2_1:19156498-19156517 None:intergenic 35.0%
TCCACTTTGTGACACAAAAA+AGG - chr2_1:19156497-19156516 Msa0199790:CDS 35.0%
!!! TCCTTTTTTGTGTCACAAAG+TGG + chr2_1:19156501-19156520 None:intergenic 35.0%
GAAGATATCATGAAGATAGC+TGG - chr2_1:19156678-19156697 Msa0199790:CDS 35.0%
! TTGATTCCTAATCACCCTTT+TGG - chr2_1:19156747-19156766 Msa0199790:CDS 35.0%
CAAAAACCAAAAGGGTGATT+AGG + chr2_1:19156756-19156775 None:intergenic 35.0%
CCAGAGAAACAAAAACCAAA+AGG + chr2_1:19156765-19156784 None:intergenic 35.0%
!!! CCTTTTGGTTTTTGTTTCTC+TGG - chr2_1:19156762-19156781 Msa0199790:CDS 35.0%
GATTCTTTGTTGAAGAGCTT+CGG + chr2_1:19156955-19156974 None:intergenic 35.0%
CAAAGAATCGACAAAGAAAC+AGG - chr2_1:19156966-19156985 Msa0199790:CDS 35.0%
! ACCTTTATTTGATCCTCAAG+AGG - chr2_1:19157028-19157047 Msa0199790:CDS 35.0%
ACCTCTTGAGGATCAAATAA+AGG + chr2_1:19157032-19157051 None:intergenic 35.0%
GACATGAATCTTCTTAGCAT+CGG + chr2_1:19157156-19157175 None:intergenic 35.0%
ATTGATCTCGAAATCCGTAA+AGG - chr2_1:19157176-19157195 Msa0199790:CDS 35.0%
TTGATCTCGAAATCCGTAAA+GGG - chr2_1:19157177-19157196 Msa0199790:CDS 35.0%
AAATCCGTAAAGGGTTACAA+TGG - chr2_1:19157186-19157205 Msa0199790:CDS 35.0%
TTGTCCATTGTAACCCTTTA+CGG + chr2_1:19157193-19157212 None:intergenic 35.0%
! TTATCTTTAGAAGCTCAAGG+GGG + chr2_1:19157250-19157269 None:intergenic 35.0%
! GTTATCTTTAGAAGCTCAAG+GGG + chr2_1:19157251-19157270 None:intergenic 35.0%
! CGTTATCTTTAGAAGCTCAA+GGG + chr2_1:19157252-19157271 None:intergenic 35.0%
! CCTTGAGCTTCTAAAGATAA+CGG - chr2_1:19157250-19157269 Msa0199790:CDS 35.0%
! CTTCAAAGTGTCTATGTTTC+CGG + chr2_1:19157285-19157304 None:intergenic 35.0%
!! AAGCATATAGTTGATGACAC+TGG - chr2_1:19157302-19157321 Msa0199790:CDS 35.0%
TGACACTGGTAAAAGATTGA+AGG - chr2_1:19157316-19157335 Msa0199790:CDS 35.0%
!! TCTTTTCAAGATAGACTCTG+AGG - chr2_1:19157415-19157434 Msa0199790:CDS 35.0%
! CTCTCATGATTGTTTCAAGT+TGG + chr2_1:19157496-19157515 None:intergenic 35.0%
GAAATGTGAAGATTGATGTG+TGG - chr2_1:19157750-19157769 Msa0199790:CDS 35.0%
GTCTTTGTATCAAGCTGAAT+TGG - chr2_1:19157823-19157842 Msa0199790:intron 35.0%
TTTGTATCAAGCTGAATTGG+TGG - chr2_1:19157826-19157845 Msa0199790:intron 35.0%
AATGTGCAAGAATTTCCACA+AGG + chr2_1:19157863-19157882 None:intergenic 35.0%
AATGGTCATTGTCTTCTTGT+TGG - chr2_1:19157890-19157909 Msa0199790:intron 35.0%
TTGCATTCACCAATGATCAA+AGG + chr2_1:19157958-19157977 None:intergenic 35.0%
! TAGTTAGTTGATGTGAGCAT+AGG - chr2_1:19158013-19158032 Msa0199790:intron 35.0%
! AGTTAGTTGATGTGAGCATA+GGG - chr2_1:19158014-19158033 Msa0199790:intron 35.0%
!! GGGTTCAAATCTTTTGAAGA+CGG - chr2_1:19158034-19158053 Msa0199790:intron 35.0%
TGAATGGTTATTCCTCCAAA+AGG - chr2_1:19158472-19158491 Msa0199790:intron 35.0%
! TGTCATAGGAGAATACCTTT+TGG + chr2_1:19158490-19158509 None:intergenic 35.0%
! CAGTTTGGTGATTTAAGGTT+TGG + chr2_1:19158532-19158551 None:intergenic 35.0%
CAAACCTTAAATCACCAAAC+TGG - chr2_1:19158530-19158549 Msa0199790:intron 35.0%
! AAACCCAGTTTGGTGATTTA+AGG + chr2_1:19158537-19158556 None:intergenic 35.0%
!!! GCGGTTTTTTAAGAGTTATG+GGG + chr2_1:19158614-19158633 None:intergenic 35.0%
!!! GTGCGGTTTTTTAAGAGTTA+TGG + chr2_1:19158616-19158635 None:intergenic 35.0%
! ACTACACTTTCAAGTAAGTG+CGG + chr2_1:19158633-19158652 None:intergenic 35.0%
TCAAGCATCATATAAGCGAA+GGG + chr2_1:19158802-19158821 None:intergenic 35.0%
TTCAAGCATCATATAAGCGA+AGG + chr2_1:19158803-19158822 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGTG+CGG - chr2_1:19159244-19159263 Msa0199790:intron 35.0%
!!! TAAGTTTTGAATAAGAGGGG+AGG - chr2_1:19159336-19159355 Msa0199790:intron 35.0%
!!! AAGTTTTGAATAAGAGGGGA+GGG - chr2_1:19159337-19159356 Msa0199790:intron 35.0%
GTAATTCAAGCATCTTTGAG+AGG - chr2_1:19159364-19159383 Msa0199790:intron 35.0%
AGAAACACTTGTACATCGAA+AGG + chr2_1:19159465-19159484 None:intergenic 35.0%
ACACTACTAACTAACTAGTG+TGG + chr2_1:19159581-19159600 None:intergenic 35.0%
AGCACATAGTTGTATTCATG+AGG + chr2_1:19159697-19159716 None:intergenic 35.0%
TTAAGAATCATGGAACCGAA+GGG + chr2_1:19159748-19159767 None:intergenic 35.0%
ATTAAGAATCATGGAACCGA+AGG + chr2_1:19159749-19159768 None:intergenic 35.0%
TTCGGTTCCATGATTCTTAA+TGG - chr2_1:19159748-19159767 Msa0199790:intron 35.0%
TTTATTGTGCTAACGCATGT+AGG - chr2_1:19159843-19159862 Msa0199790:intron 35.0%
ATGCTAAAGAGGAAAGAAAG+CGG - chr2_1:19160285-19160304 Msa0199790:intron 35.0%
TTGATTGTCAATGGCCAAAA+AGG - chr2_1:19160513-19160532 Msa0199790:intron 35.0%
TGATTGTCAATGGCCAAAAA+GGG - chr2_1:19160514-19160533 Msa0199790:intron 35.0%
CTTAGAGGATATACAATGAG+AGG + chr2_1:19160763-19160782 None:intergenic 35.0%
TCGATCGTTATCACTATGTT+AGG - chr2_1:19160948-19160967 Msa0199790:intron 35.0%
! ATTGAAGTCTGGTTCATCAA+GGG - chr2_1:19161066-19161085 Msa0199790:intron 35.0%
GATGTCAATGATGCAATTCA+AGG + chr2_1:19161103-19161122 None:intergenic 35.0%
!!! TCTCCATTTTTGAAGTATCG+AGG - chr2_1:19161279-19161298 Msa0199790:intron 35.0%
!!! CTCCATTTTTGAAGTATCGA+GGG - chr2_1:19161280-19161299 Msa0199790:intron 35.0%
ATGCACTTAATAAAATGGGG+AGG - chr2_1:19161370-19161389 Msa0199790:intron 35.0%
TGCACTTAATAAAATGGGGA+GGG - chr2_1:19161371-19161390 Msa0199790:intron 35.0%
TCATACCAACGTGAATACAT+CGG - chr2_1:19161431-19161450 Msa0199790:intron 35.0%
CACAGTTGTTAAACGTGTTA+GGG - chr2_1:19161469-19161488 Msa0199790:intron 35.0%
!! ATAATGGGTCGATATGATCA+AGG + chr2_1:19161645-19161664 None:intergenic 35.0%
ATATCGACCCATTATCATGA+TGG - chr2_1:19161650-19161669 Msa0199790:intron 35.0%
GTACTCACCATCATGATAAT+GGG + chr2_1:19161660-19161679 None:intergenic 35.0%
TGTACTCACCATCATGATAA+TGG + chr2_1:19161661-19161680 None:intergenic 35.0%
!! GATGTTGGTGATGATACTTT+AGG + chr2_1:19162124-19162143 None:intergenic 35.0%
TGATAACCTACACTTTGACA+TGG - chr2_1:19156440-19156459 Msa0199790:CDS 35.0%
AAGGAGATTGGTAGAATGAT+TGG + chr2_1:19162259-19162278 None:intergenic 35.0%
! AATATGTCAACTGGTGCTAA+AGG + chr2_1:19162278-19162297 None:intergenic 35.0%
ATTATGGCAAAGGATTCAAG+AGG - chr2_1:19162303-19162322 Msa0199790:CDS 35.0%
! AGGTTATTACCTGATGATGA+AGG - chr2_1:19162323-19162342 Msa0199790:CDS 35.0%
CATACAATCATCATCTTCGT+CGG - chr2_1:19156710-19156729 Msa0199790:CDS 35.0%
CACGAGAAAGAAAAACCAAA+AGG + chr2_1:19162506-19162525 None:intergenic 35.0%
! CTGTTTCTTTGTCGATTGTT+TGG + chr2_1:19162703-19162722 None:intergenic 35.0%
CAAACAATCGACAAAGAAAC+AGG - chr2_1:19162701-19162720 Msa0199790:CDS 35.0%
ATCCAACAACATGCAAAAGA+TGG - chr2_1:19162739-19162758 Msa0199790:CDS 35.0%
! TTCCATCTTTTGCATGTTGT+TGG + chr2_1:19162744-19162763 None:intergenic 35.0%
! CACATGTGTACAAGCTTTAT+TGG - chr2_1:19162856-19162875 Msa0199790:intron 35.0%
!! AAATTCGAAAAGGGTGTCAA+TGG - chr2_1:19162921-19162940 Msa0199790:CDS 35.0%
AAGATAACAGCTATTGAGAG+CGG - chr2_1:19162998-19163017 Msa0199790:CDS 35.0%
!! ATGATTGTTTCGAGTTTGTC+TGG + chr2_1:19163226-19163245 None:intergenic 35.0%
GAAACGGTTCACAAAAGATT+TGG + chr2_1:19157579-19157598 None:intergenic 35.0%
!!! GAGTCAATGTATTTTGGTCA+TGG - chr2_1:19163418-19163437 Msa0199790:CDS 35.0%
! TTTCACAAGATTTGGAATGG+TGG - chr2_1:19157781-19157800 Msa0199790:intron 35.0%
GTCTTTGTATCAAGCTGAAT+TGG - chr2_1:19157823-19157842 Msa0199790:intron 35.0%
TTTGTATCAAGCTGAATTGG+TGG - chr2_1:19157826-19157845 Msa0199790:intron 35.0%
GTCATTGTCTTCTTATTGGA+TGG - chr2_1:19163629-19163648 Msa0199790:intron 35.0%
TGTCTTCTTATTGGATGGAA+AGG - chr2_1:19163634-19163653 Msa0199790:intron 35.0%
GAAGATCTAGGAGACTGTAA+TGG - chr2_1:19156303-19156322 Msa0199790:CDS 40.0%
! CAACTGGTGCTAAAGGAATT+TGG + chr2_1:19156536-19156555 None:intergenic 40.0%
ACTATGGCAAATGCTTCAAG+AGG - chr2_1:19156568-19156587 Msa0199790:CDS 40.0%
AAGAGGTTACTACCTGATGA+AGG - chr2_1:19156585-19156604 Msa0199790:CDS 40.0%
! TGAAGGGTTTTTCCTTCATC+AGG + chr2_1:19156600-19156619 None:intergenic 40.0%
TCATGAAGATAGCTGGAACA+AGG - chr2_1:19156685-19156704 Msa0199790:CDS 40.0%
!! TTAGCTTGTGCTGAGAAAGT+CGG - chr2_1:19156831-19156850 Msa0199790:CDS 40.0%
GAGTCTTTATCTTCGAAGAC+AGG - chr2_1:19156897-19156916 Msa0199790:CDS 40.0%
! TCGATTGAAGTGCTTGCATT+AGG + chr2_1:19157217-19157236 None:intergenic 40.0%
! CCGTTATCTTTAGAAGCTCA+AGG + chr2_1:19157253-19157272 None:intergenic 40.0%
! AAGATAACGGCTATTGTGAC+CGG - chr2_1:19157263-19157282 Msa0199790:CDS 40.0%
CCGTGACAACCATTACTATA+GGG + chr2_1:19157535-19157554 None:intergenic 40.0%
CCCTATAGTAATGGTTGTCA+CGG - chr2_1:19157532-19157551 Msa0199790:CDS 40.0%
TCCGTGACAACCATTACTAT+AGG + chr2_1:19157536-19157555 None:intergenic 40.0%
AGGAATATTGTGGCTGAAGA+AGG - chr2_1:19157710-19157729 Msa0199790:CDS 40.0%
GTGGCTAAAAGATTTCCTTG+TGG - chr2_1:19157845-19157864 Msa0199790:intron 40.0%
GTCATTGTCTTCTTGTTGGA+TGG - chr2_1:19157894-19157913 Msa0199790:intron 40.0%
TTGTCTTCTTGTTGGATGGA+AGG - chr2_1:19157898-19157917 Msa0199790:intron 40.0%
TGTCTTCTTGTTGGATGGAA+GGG - chr2_1:19157899-19157918 Msa0199790:intron 40.0%
! CATAGGAGAATACCTTTTGG+AGG + chr2_1:19158487-19158506 None:intergenic 40.0%
GGAAGAGATAAAACCCAGTT+TGG + chr2_1:19158547-19158566 None:intergenic 40.0%
! TCAAGAATCTTTGAAGGGAG+AGG + chr2_1:19158712-19158731 None:intergenic 40.0%
ATTCAAGCTTCTCTTAGGGA+AGG - chr2_1:19159273-19159292 Msa0199790:intron 40.0%
TTCAAGCTTCTCTTAGGGAA+GGG - chr2_1:19159274-19159293 Msa0199790:intron 40.0%
!!! AGTTTTGAATAAGAGGGGAG+GGG - chr2_1:19159338-19159357 Msa0199790:intron 40.0%
GTTAGTTAGTAGTGTCACAG+AGG - chr2_1:19159586-19159605 Msa0199790:intron 40.0%
AGGAAAGAAAGCGGAAAAAC+TGG - chr2_1:19160294-19160313 Msa0199790:intron 40.0%
GGAAAGAAAGCGGAAAAACT+GGG - chr2_1:19160295-19160314 Msa0199790:intron 40.0%
CTTGAAGAAACTATCCGTTC+AGG + chr2_1:19160446-19160465 None:intergenic 40.0%
CTTCAATGACCATGAAGTCA+TGG - chr2_1:19160551-19160570 Msa0199790:intron 40.0%
GAGAGTCAAAGACTGTAAGT+TGG - chr2_1:19160583-19160602 Msa0199790:intron 40.0%
TCTAATGATCCGCAACTTAG+AGG + chr2_1:19160778-19160797 None:intergenic 40.0%
! CATTGAAGTCTGGTTCATCA+AGG - chr2_1:19161065-19161084 Msa0199790:intron 40.0%
GTCCCTCGATACTTCAAAAA+TGG + chr2_1:19161285-19161304 None:intergenic 40.0%
GCACTTAATAAAATGGGGAG+GGG - chr2_1:19161372-19161391 Msa0199790:intron 40.0%
CCTAACACGTTTAACAACTG+TGG + chr2_1:19161471-19161490 None:intergenic 40.0%
CCACAGTTGTTAAACGTGTT+AGG - chr2_1:19161468-19161487 Msa0199790:intron 40.0%
! TTTTCTGCAGCAGAAGATCT+AGG - chr2_1:19162077-19162096 Msa0199790:CDS 40.0%
GAAGATCTAGGAGACTATCA+TGG - chr2_1:19162089-19162108 Msa0199790:CDS 40.0%
AGTGAACCATGTCAAAGTGT+AGG + chr2_1:19162184-19162203 None:intergenic 40.0%
AGGATTTCTCCTTCATCATC+AGG + chr2_1:19162335-19162354 None:intergenic 40.0%
ATAGAGATCATGAAGCTAGC+TGG - chr2_1:19162419-19162438 Msa0199790:intron 40.0%
!! TTAGCTTGTGCTGAGAAAGT+CGG - chr2_1:19156831-19156850 Msa0199790:CDS 40.0%
TAAGCGCGTGGTTCATTATT+TGG - chr2_1:19156929-19156948 Msa0199790:CDS 40.0%
! TCGATTGAAGTGCTTGCATT+AGG + chr2_1:19157217-19157236 None:intergenic 40.0%
! GTTATCTTTAGAAGCTCGAG+TGG + chr2_1:19162986-19163005 None:intergenic 40.0%
CACTTCGAAGCATATAGTTG+AGG - chr2_1:19163030-19163049 Msa0199790:CDS 40.0%
AAGCATATAGTTGAGGACAC+TGG - chr2_1:19163037-19163056 Msa0199790:CDS 40.0%
GGACACTGGTAAAAGATTGA+AGG - chr2_1:19163051-19163070 Msa0199790:CDS 40.0%
AGGAATATTGTGGCTGAAGA+AGG - chr2_1:19157710-19157729 Msa0199790:CDS 40.0%
AAGGAGCTGAAAGAAAGAGT+AGG - chr2_1:19157729-19157748 Msa0199790:CDS 40.0%
GTGGCTAAAAGATTTCCTTG+TGG - chr2_1:19157845-19157864 Msa0199790:intron 40.0%
AATGTGCAAGAACATCCACA+AGG + chr2_1:19163598-19163617 None:intergenic 40.0%
! CAAAGTGGAGGGTCTTTTGT+TGG + chr2_1:19156486-19156505 None:intergenic 45.0%
AATGAACCACGCGCTTAACT+GGG + chr2_1:19156926-19156945 None:intergenic 45.0%
TAATGAACCACGCGCTTAAC+TGG + chr2_1:19156927-19156946 None:intergenic 45.0%
TGATCCTCAAGAGGTAACCA+AGG - chr2_1:19157037-19157056 Msa0199790:CDS 45.0%
AGATCCTTGGTTACCTCTTG+AGG + chr2_1:19157044-19157063 None:intergenic 45.0%
!! AAGCGCTGGATTTAGATCCT+TGG + chr2_1:19157057-19157076 None:intergenic 45.0%
! AGACTCTGAGGAAACTGTTG+TGG - chr2_1:19157427-19157446 Msa0199790:CDS 45.0%
! TCAAGCATCTTTGAGAGGAG+AGG - chr2_1:19159369-19159388 Msa0199790:intron 45.0%
GTTCACATAGCTCACACTCT+CGG + chr2_1:19160345-19160364 None:intergenic 45.0%
!! GAAGTATCGAGGGACTTCAT+AGG - chr2_1:19161290-19161309 Msa0199790:intron 45.0%
GAGATCCGATGTATTCACGT+TGG + chr2_1:19161439-19161458 None:intergenic 45.0%
GGCGTAAGTGATGACATTAC+CGG + chr2_1:19161602-19161621 None:intergenic 45.0%
ATCACTTACGCCATCTTTGC+TGG - chr2_1:19161610-19161629 Msa0199790:intron 45.0%
GTGGTATAAGCCAGCAAAGA+TGG + chr2_1:19161623-19161642 None:intergenic 45.0%
ATGGGTCGATATGATCAAGG+TGG + chr2_1:19161642-19161661 None:intergenic 45.0%
! CAACTGGTGCTAAAGGAGAT+TGG + chr2_1:19162271-19162290 None:intergenic 45.0%
TCATGAAGCTAGCTGGAACA+AGG - chr2_1:19162426-19162445 Msa0199790:CDS 45.0%
CAAATCGAGTCTTCGAAGAC+AGG - chr2_1:19162632-19162651 Msa0199790:intron 45.0%
TAATGAACCACGCGCTTAAC+CGG + chr2_1:19156927-19156946 None:intergenic 45.0%
TGATCCTGAAGAGGTTAGCA+AGG - chr2_1:19162772-19162791 Msa0199790:CDS 45.0%
AGATCCTTGCTAACCTCTTC+AGG + chr2_1:19162779-19162798 None:intergenic 45.0%
GGTTAGCAAGGATCTAAACC+CGG - chr2_1:19162784-19162803 Msa0199790:CDS 45.0%
ATCTTCGTAAAGCGCGATCA+TGG + chr2_1:19162810-19162829 None:intergenic 45.0%
AGATTCGGAAGAAACAGTCG+CGG - chr2_1:19163162-19163181 Msa0199790:CDS 45.0%
TCGGCGACAACCATTACTAT+AGG + chr2_1:19163271-19163290 None:intergenic 45.0%
!! ATATATTTAAAAAAAATGAA+TGG - chr2_1:19158456-19158475 Msa0199790:intron 5.0%
!! ATAAAAAAAATTAATATTGA+AGG - chr2_1:19159209-19159228 Msa0199790:intron 5.0%
!!! ACATTATATAATATTTTTTA+AGG - chr2_1:19161338-19161357 Msa0199790:intron 5.0%
!!! CATTATATAATATTTTTTAA+GGG - chr2_1:19161339-19161358 Msa0199790:intron 5.0%
TCTTCGTCGCAATCTGCATC+AGG - chr2_1:19156723-19156742 Msa0199790:CDS 50.0%
TCAAAAAACGCGACAAGCGC+TGG + chr2_1:19157071-19157090 None:intergenic 50.0%
GGAAGGGCAAGCTTCTCTTA+GGG - chr2_1:19159290-19159309 Msa0199790:intron 50.0%
GGCAAGCTTCTCTTAGGGAA+GGG - chr2_1:19159295-19159314 Msa0199790:intron 50.0%
GCAAGCTTCTCTTAGGGAAG+GGG - chr2_1:19159296-19159315 Msa0199790:intron 50.0%
CACAAAGGGCAGATCCTGAA+CGG - chr2_1:19160429-19160448 Msa0199790:intron 50.0%
TCTTCGTCGGAATCTGCATC+AGG - chr2_1:19162464-19162483 Msa0199790:CDS 50.0%
GTCTTCGAAGACAGGTAACC+CGG - chr2_1:19162640-19162659 Msa0199790:intron 50.0%
AATGAACCACGCGCTTAACC+GGG + chr2_1:19162661-19162680 None:intergenic 50.0%
AGGTAACCCAGTTAAGCGCG+TGG - chr2_1:19156917-19156936 Msa0199790:CDS 55.0%
GGGAAGGGCAAGCTTCTCTT+AGG - chr2_1:19159289-19159308 Msa0199790:intron 55.0%
GGGCAAGCTTCTCTTAGGGA+AGG - chr2_1:19159294-19159313 Msa0199790:intron 55.0%
AGCTCTGCGCCATGACTTCA+TGG + chr2_1:19160563-19160582 None:intergenic 55.0%
TCGTAAAGCGCGATCATGGC+CGG + chr2_1:19162806-19162825 None:intergenic 55.0%
AGGTAACCCGGTTAAGCGCG+TGG - chr2_1:19162652-19162671 Msa0199790:CDS 60.0%
CGTAAAGCGCGATCATGGCC+GGG + chr2_1:19162805-19162824 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 19156097 19163693 19156097 ID=Msa0199790;Name=Msa0199790
chr2_1 mRNA 19156097 19163693 19156097 ID=Msa0199790-mRNA-1;Parent=Msa0199790;Name=Msa0199790-mRNA-1;_AED=0.07;_eAED=0.10;_QI=32|0|0|0.88|0|0|9|0|1006
chr2_1 exon 19163686 19163693 19163686 ID=Msa0199790-mRNA-1:exon:8014;Parent=Msa0199790-mRNA-1
chr2_1 exon 19163396 19163574 19163396 ID=Msa0199790-mRNA-1:exon:8013;Parent=Msa0199790-mRNA-1
chr2_1 exon 19162972 19163200 19162972 ID=Msa0199790-mRNA-1:exon:8012;Parent=Msa0199790-mRNA-1
chr2_1 exon 19162892 19162955 19162892 ID=Msa0199790-mRNA-1:exon:8011;Parent=Msa0199790-mRNA-1
chr2_1 exon 19162642 19162871 19162642 ID=Msa0199790-mRNA-1:exon:8010;Parent=Msa0199790-mRNA-1
chr2_1 exon 19162423 19162623 19162423 ID=Msa0199790-mRNA-1:exon:8009;Parent=Msa0199790-mRNA-1
chr2_1 exon 19162155 19162365 19162155 ID=Msa0199790-mRNA-1:exon:8008;Parent=Msa0199790-mRNA-1
chr2_1 exon 19161897 19162133 19161897 ID=Msa0199790-mRNA-1:exon:8007;Parent=Msa0199790-mRNA-1
chr2_1 exon 19156097 19157787 19156097 ID=Msa0199790-mRNA-1:exon:8006;Parent=Msa0199790-mRNA-1
chr2_1 five_prime_UTR 19163686 19163693 19163686 ID=Msa0199790-mRNA-1:five_prime_utr;Parent=Msa0199790-mRNA-1
chr2_1 five_prime_UTR 19163551 19163574 19163551 ID=Msa0199790-mRNA-1:five_prime_utr;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19163396 19163550 19163396 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19162972 19163200 19162972 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19162892 19162955 19162892 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19162642 19162871 19162642 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19162423 19162623 19162423 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19162155 19162365 19162155 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19161897 19162133 19161897 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
chr2_1 CDS 19156097 19157787 19156097 ID=Msa0199790-mRNA-1:cds;Parent=Msa0199790-mRNA-1
Gene Sequence

>Msa0199790

ATGATATTTTTTTGGGAAACCAAGAAACTTGGTGAAATGAAAAATGTTCAATTTTCTGTAGAAGAAGATCTAGGAGACTGTAATGGAATTGAGTCTCTTTGCTCTAATTTTGGTCTCTTTCAAGATGTTCCATCAGAAGAAGATGATTTCCTAAAGTTACTACCTGATGAAGGAAAAACCCTTCATCCAGTTAATGATTTTGGTTTGATCACAGATAATGAAAATGAGAGTAAGTTGTCAACTGAAGATATCATGAAGATAGCTGGAACAAGGTTCATACAATCATCATCTTCGTCGCAATCTGCATCAGGTTTGATTCCTAATCACCCTTTTGGTTTTTGTTTCTCTGGTTTATCTGATGAAGAGAAAGAAGATGTTTCACTTCTTGTGCTGAGAAAGTCGGATATCAACAATATCAACGCGCTAGAAAATTGTTATTACAAATCGAGTAACCCAGTTAAGCGCGTGGTTCATTATTTTGCCGAAGCTCTTCAACAAAGAATCGACAAAGAAACAGGAAGAGTTTCTGTTTTGACAAACAATATGCAAAAGATGGGACCTTTATTTGATCCTCAAGAGGTAACCAAGGATCTAAATCCAGCGCTTGTCGCGTTTTTTGAAGATCTTCCATTTTGTAAAATTTCAATGTTCACATGTGTACAAACTTTAATAGAAAATATTCATGTCATTGATCTCGAAATCCGTAAAGGGTTACAATGGACAATCCTAATGCAAGCACTTCAATCGAGAAACAAATGCCCCCTTGAGCTTCTAAAGATAACGGCTATTGTGACCGGAAACATAGACACTTTGAAGCATATAGTTGATGACACTGGTAAAAGATTGAAGGACTTTGCGCGATATTTGAACATACCTTTTATAGACTCTGAGGAAACTGTTGTGGTTTACTCTCAGTTTGCGCTTCGAAGCAAGATTCAACAATCAGACCAACTTGAAACAATCATGAGAGTAGTTAGAACCATAAACCCTATAGTAATGGTTGTCACGGAGATTGAAGCTAATCACAATTCTAAATCTTTTGTGAACCGTTTCATCAAAGCACTTTTTTACTTTAGTGCATTTTTCGATAGTGATGAGAAAAACAGATTTATTCTAGAGTCAATGTATTTTAGTCATGGTATTAGGAATATTGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTGAAGATTGATGTGTGGAGAGCATTTTTCACAAGATTTGGAATGGTTGAAACAGAATTGAGTATGAAGTCTTTGTATCAAGCTGAATTGGTGGCTAAAAGATTTCCTTGTGGAAATTCTTGCACATTTGATATGAATGTTGAGGATAAACTTAGTTCATCCAATGATATTTTTTGGGAAACCAAGAAACTTAGTGAAATGAAAAATGTTAAATTTTCTGCAGCAGAAGATCTAGGAGACTATCATGGAATTGAGTTCCTAAAGTATCATCACCAACATCAACAAGAATCATATCAAGATTATGAAACTTTTGATAACCTACACTTTGACATGGTTCACTTTGATGAACAATGTCCTAAAAGAATTCTTCCACTTTATGACACAAAAAAGGACCAATCATTCTACCAATCTCCTTTAGCACCAGTTGACATATTGAAGAATTATGGCAAAGGATTCAAGAGGTTATTACCTGATGATGAAGGAGAAATCCTTCATCCTGTTAATGATTTTGGTTTAGTCACAAATAATGAAAATGAGAAAAAGTTGTTGTCAACTATAGAGATCATGAAGCTAGCTGGAACAAGGTTCATACAATCATCATCTTCGTCGGAATCTGCATCAGGTTTGATTCTTAATCACCCTTTTGGTTTTTCTTTCTCGTGTTTATCTGATGAAGAGAAAGAAGATGTTTCGCTTGCTGAATCACTCTTAGCTTGTGCTGAGAAAGTCGGATATCAACAATATGAACGCGCTAGAAAATTGTTATCACAAATCGAGTCTTCGAAGACAGGTAACCCGGTTAAGCGCGTGGTTCATTATTTGGCTGAAGCTCTTCGCCAAACAATCGACAAAGAAACAGGACGATTTTCTGTTTCATCCAACAACATGCAAAAGATGGAATCTTTATTTGATCCTGAAGAGGTTAGCAAGGATCTAAACCCGGCCATGATCGCGCTTTACGAAGATCTTCCATTCAGTCAAGTTTCAATATTCACATGTGTACAAGCTTTATTGGAAAATGTAAATGATGCAAAGAAGATTCATGTTATTGATCTCGAAATTCGAAAAGGGTGTCAATGGACAATCCTAATGCAAGCACTTCAATCGAGAAACGAATGTCCACTCGAGCTTCTAAAGATAACAGCTATTGAGAGCGGAAACTCAGACACTTCGAAGCATATAGTTGAGGACACTGGTAAAAGATTGAAGGATTTTGCGCAAAGTTTGAACATACCTTTTTCGTTCGATATAGTTATTGTATCTGATTTGTTAAATATAAGAGAAGATCTTTTCAAGATAGATTCGGAAGAAACAGTCGCGGTTTATTCTCAATTTGCGCTTAGAAGCAAAATTCAACAACCAGACAAACTCGAAACAATCATGAGAGTGATTAGAACCATAAATCCTATAGTAATGGTTGTCGCCGAGAATGAAGCTAATCACAATTCCAAATCTTTTGTGAACCGTTTCATCGAAGCACTTTTTTACTTTAGTGCATACTTTGATTGTTTTGAGAATTGTATGAAAGGTGATGAGAAAAACAGATTTATTCTAGAGTCAATGTATTTTGGTCATGGAATTAGGAATATTGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGGAATGTAAAGATTGATGTTTGGAGAGCATTTTTCACAAGATTTGGAATGGTGGAAACAGAATTGAGTATGAAGTCTTTGTATCAAGCTGAATTGGTGGCTAAAAGATTTCCTTGTGGATGTTCTTGCACATTTGATATGAATGGTCATTGTCTTCTTATTGGATGGAAAGGAACACCAATTAACTCTGTTTCTGTTTGGAAATTCATT
Protein sequence

>Msa0199790

MIFFWETKKLGEMKNVQFSVEEDLGDCNGIESLCSNFGLFQDVPSEEDDFLKLLPDEGKTLHPVNDFGLITDNENESKLSTEDIMKIAGTRFIQSSSSSQSASGLIPNHPFGFCFSGLSDEEKEDVSLLVLRKSDINNINALENCYYKSSNPVKRVVHYFAEALQQRIDKETGRVSVLTNNMQKMGPLFDPQEVTKDLNPALVAFFEDLPFCKISMFTCVQTLIENIHVIDLEIRKGLQWTILMQALQSRNKCPLELLKITAIVTGNIDTLKHIVDDTGKRLKDFARYLNIPFIDSEETVVVYSQFALRSKIQQSDQLETIMRVVRTINPIVMVVTEIEANHNSKSFVNRFIKALFYFSAFFDSDEKNRFILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFPCGNSCTFDMNVEDKLSSSNDIFWETKKLSEMKNVKFSAAEDLGDYHGIEFLKYHHQHQQESYQDYETFDNLHFDMVHFDEQCPKRILPLYDTKKDQSFYQSPLAPVDILKNYGKGFKRLLPDDEGEILHPVNDFGLVTNNENEKKLLSTIEIMKLAGTRFIQSSSSSESASGLILNHPFGFSFSCLSDEEKEDVSLAESLLACAEKVGYQQYERARKLLSQIESSKTGNPVKRVVHYLAEALRQTIDKETGRFSVSSNNMQKMESLFDPEEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKDFAQSLNIPFSFDIVIVSDLLNIREDLFKIDSEETVAVYSQFALRSKIQQPDKLETIMRVIRTINPIVMVVAENEANHNSKSFVNRFIEALFYFSAYFDCFENCMKGDEKNRFILESMYFGHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFPCGCSCTFDMNGHCLLIGWKGTPINSVSVWKFI