Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202550 | QOV03064.1 | 97.099 | 586 | 17 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202550 | sp|Q5D0W8|NPR1_ORYSI | 57.040 | 554 | 201 | 8 | 50 | 576 | 36 | 579 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202550 | A0A7U3NJF6 | 97.099 | 586 | 17 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1181 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0202550 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202550 | MtrunA17_Chr2g0299621 | 94.027 | 586 | 33 | 1 | 1 | 586 | 1 | 584 | 0.0 | 1082 |
| Msa0202550 | MtrunA17_Chr2g0291741 | 43.548 | 558 | 284 | 10 | 18 | 558 | 21 | 564 | 3.55e-145 | 432 |
| Msa0202550 | MtrunA17_Chr5g0442661 | 40.301 | 531 | 291 | 9 | 50 | 563 | 50 | 571 | 8.59e-125 | 380 |
| Msa0202550 | MtrunA17_Chr1g0171771 | 30.997 | 371 | 214 | 8 | 67 | 402 | 24 | 387 | 2.99e-38 | 147 |
| Msa0202550 | MtrunA17_Chr7g0256321 | 30.645 | 372 | 215 | 7 | 67 | 402 | 24 | 388 | 5.20e-38 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202550 | AT1G64280.1 | 51.489 | 571 | 244 | 9 | 7 | 558 | 7 | 563 | 0.0 | 547 |
| Msa0202550 | AT4G26120.2 | 49.739 | 575 | 255 | 10 | 12 | 569 | 16 | 573 | 2.69e-175 | 509 |
| Msa0202550 | AT4G26120.1 | 49.739 | 575 | 255 | 10 | 12 | 569 | 15 | 572 | 3.16e-175 | 509 |
| Msa0202550 | AT4G19660.1 | 40.993 | 544 | 288 | 11 | 31 | 555 | 22 | 551 | 4.13e-123 | 375 |
| Msa0202550 | AT5G45110.1 | 42.424 | 528 | 272 | 11 | 50 | 556 | 43 | 559 | 4.31e-123 | 375 |
| Msa0202550 | AT4G19660.2 | 39.229 | 571 | 287 | 12 | 31 | 555 | 22 | 578 | 6.65e-118 | 362 |
| Msa0202550 | AT5G45110.2 | 41.615 | 483 | 250 | 11 | 50 | 514 | 43 | 511 | 7.45e-109 | 336 |
| Msa0202550 | AT3G57130.1 | 31.536 | 371 | 209 | 9 | 67 | 402 | 26 | 386 | 5.24e-41 | 155 |
| Msa0202550 | AT2G41370.1 | 29.899 | 398 | 223 | 10 | 54 | 402 | 3 | 393 | 2.16e-36 | 142 |
Find 97 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAATTTACTCCGAATT+TGG | 0.080716 | 2_1:-24995150 | Msa0202550:CDS |
| TGCGAGGAGTAGTTTCTTTA+AGG | 0.145670 | 2_1:-24996679 | Msa0202550:CDS |
| ACTAAACATTCTTGATAAAA+TGG | 0.238573 | 2_1:-24996109 | Msa0202550:CDS |
| CACCTTTCAAATTTCTGAAT+TGG | 0.280768 | 2_1:-24996427 | Msa0202550:CDS |
| GCGCTTCACTTGTCGATCTT+CGG | 0.290085 | 2_1:+24994661 | None:intergenic |
| TGAATTGGTTGCTCTTTATC+AGG | 0.291540 | 2_1:-24996412 | Msa0202550:intron |
| TATATTACTTGTTTCACTAT+AGG | 0.308533 | 2_1:+24995949 | None:intergenic |
| ATGTTTGTCTAGAAGATTTA+CGG | 0.318420 | 2_1:+24995891 | None:intergenic |
| ATCTAAAGCTCTATGTATTC+TGG | 0.325893 | 2_1:+24995864 | None:intergenic |
| CGCTTCACTTGTCGATCTTC+GGG | 0.329375 | 2_1:+24994662 | None:intergenic |
| GCTACAAGAAGTTCTTAATA+AGG | 0.338445 | 2_1:-24994624 | Msa0202550:CDS |
| ACTACTGAGCTTCTTGATCT+TGG | 0.343475 | 2_1:-24995736 | Msa0202550:CDS |
| TCGATTGTGTATCGAGATAT+TGG | 0.362910 | 2_1:-24995494 | Msa0202550:CDS |
| TCTGAATTTACTCCGAATTT+GGG | 0.369283 | 2_1:-24995149 | Msa0202550:CDS |
| TCATCTTGAGCAGTGGAGTT+GGG | 0.376033 | 2_1:-24994776 | Msa0202550:intron |
| AATTCAGATGTGCCATCAAT+TGG | 0.381830 | 2_1:+24995164 | None:intergenic |
| AAAGAGGAGTTTGATAAATC+TGG | 0.386748 | 2_1:-24994587 | Msa0202550:CDS |
| GAAGTAGTGATAGCTGAATT+TGG | 0.388122 | 2_1:+24996852 | None:intergenic |
| GTGACTAAGGATTATGATGT+TGG | 0.390092 | 2_1:-24996612 | Msa0202550:CDS |
| ATTGTTTACACTTTGGTTGT+TGG | 0.395598 | 2_1:-24996491 | Msa0202550:CDS |
| TCATCCTCATCCACGTCAAT+AGG | 0.401640 | 2_1:-24994554 | Msa0202550:CDS |
| ATATACAAACGCAAACAATT+AGG | 0.413643 | 2_1:-24995931 | Msa0202550:CDS |
| CAAACTCCTCTTTGTCCTCA+TGG | 0.421934 | 2_1:+24994597 | None:intergenic |
| ATCTGGTAACCACCCAAATT+CGG | 0.423912 | 2_1:+24995137 | None:intergenic |
| AGAAACTTCTCGACCATCTC+TGG | 0.426255 | 2_1:+24996722 | None:intergenic |
| TAAAAGAGGAGCATCTAATT+CGG | 0.429046 | 2_1:-24995079 | Msa0202550:CDS |
| TCTCTTTCTCTTGCTAAGGC+AGG | 0.429539 | 2_1:-24995433 | Msa0202550:CDS |
| CTCTTTCTCTTGCTAAGGCA+GGG | 0.442710 | 2_1:-24995432 | Msa0202550:CDS |
| GTCATCTTGAGCAGTGGAGT+TGG | 0.451507 | 2_1:-24994777 | Msa0202550:intron |
| TGGTTACCAGATGACAACTA+TGG | 0.458097 | 2_1:-24995126 | Msa0202550:CDS |
| GGCATCTCTTTCTCTTGCTA+AGG | 0.467473 | 2_1:-24995437 | Msa0202550:CDS |
| CCTATCGCAGCTTGCATGCA+TGG | 0.468067 | 2_1:-24994696 | Msa0202550:CDS |
| ATGGATATCAATCCAATTGA+TGG | 0.475189 | 2_1:-24995176 | Msa0202550:CDS |
| TGACTAAGGATTATGATGTT+GGG | 0.476464 | 2_1:-24996611 | Msa0202550:CDS |
| CTTTCTATAGCAAACGTTTG+TGG | 0.477691 | 2_1:-24996063 | Msa0202550:CDS |
| GTTCTGCGTTATTTGTATAG+TGG | 0.478232 | 2_1:-24996570 | Msa0202550:CDS |
| TCAAGTCCATAGTTGTCATC+TGG | 0.479820 | 2_1:+24995120 | None:intergenic |
| TGAAGCATGAAATCAACAAC+AGG | 0.485589 | 2_1:+24996468 | None:intergenic |
| ATCACAACCTTTGCTTCCAT+CGG | 0.509584 | 2_1:+24995197 | None:intergenic |
| GCAACTGAAGGAAGTGACTA+AGG | 0.511330 | 2_1:-24996625 | Msa0202550:CDS |
| GAGCAGTGGAGTTGGGGAAA+CGG | 0.514130 | 2_1:-24994769 | Msa0202550:intron |
| CTTTCCTATTGACGTGGATG+AGG | 0.515811 | 2_1:+24994550 | None:intergenic |
| AGAAGTGTTGAACAAGATCA+TGG | 0.517746 | 2_1:-24994729 | Msa0202550:CDS |
| TCTTTCTCTTGCTAAGGCAG+GGG | 0.519191 | 2_1:-24995431 | Msa0202550:CDS |
| ATTGGAGCAAGCTGAGAGAA+GGG | 0.524671 | 2_1:-24995476 | Msa0202550:CDS |
| GATGATGATTGTTTACACTT+TGG | 0.524715 | 2_1:-24996498 | Msa0202550:CDS |
| ATTGTATCTTTGTTAACGAA+GGG | 0.525145 | 2_1:-24995634 | Msa0202550:CDS |
| GTCGAGAAGTTTCTGTGCAC+CGG | 0.525175 | 2_1:-24996713 | Msa0202550:CDS |
| ATAATGATGTACTTGAGAAG+TGG | 0.540852 | 2_1:-24996945 | Msa0202550:CDS |
| TATTGGAGCAAGCTGAGAGA+AGG | 0.543360 | 2_1:-24995477 | Msa0202550:CDS |
| TATTATAAATCTACTGAGGA+AGG | 0.543578 | 2_1:-24995535 | Msa0202550:CDS |
| CATCTTGAGCAGTGGAGTTG+GGG | 0.545384 | 2_1:-24994775 | Msa0202550:intron |
| ACTTGTTTCACTATAGGTTG+AGG | 0.548262 | 2_1:+24995955 | None:intergenic |
| TAAATCTACTGAGGAAGGAA+AGG | 0.549862 | 2_1:-24995530 | Msa0202550:CDS |
| GGCACCATTTAAAATAAAAG+AGG | 0.551112 | 2_1:-24995093 | Msa0202550:CDS |
| TATTGTATCTTTGTTAACGA+AGG | 0.551812 | 2_1:-24995635 | Msa0202550:CDS |
| CCTTCTGAACTCACTTTCGA+TGG | 0.555532 | 2_1:-24995604 | Msa0202550:CDS |
| ATGAAGGCATTATCTAGAGC+AGG | 0.556683 | 2_1:-24995056 | Msa0202550:intron |
| CCTTGACTTTCCTATTGACG+TGG | 0.557026 | 2_1:+24994544 | None:intergenic |
| GGAGCATCTAATTCGGATGA+AGG | 0.559476 | 2_1:-24995072 | Msa0202550:CDS |
| TGCAAGCTGCGATAGGTCAT+CGG | 0.560452 | 2_1:+24994703 | None:intergenic |
| CTATCGCAGCTTGCATGCAT+GGG | 0.560772 | 2_1:-24994695 | Msa0202550:CDS |
| GCAAAGATCATTGCCAGAGA+TGG | 0.562499 | 2_1:-24996735 | Msa0202550:CDS |
| AACCAATTCAGAAATTTGAA+AGG | 0.567258 | 2_1:+24996425 | None:intergenic |
| AGAAACGATGCTGCAACTGA+AGG | 0.567744 | 2_1:-24996637 | Msa0202550:CDS |
| CCATGCATGCAAGCTGCGAT+AGG | 0.568643 | 2_1:+24994696 | None:intergenic |
| AGAGATGCCTCACCATGTAA+AGG | 0.569360 | 2_1:+24995451 | None:intergenic |
| GAGAGAAGGGAGCCTTTACA+TGG | 0.569857 | 2_1:-24995463 | Msa0202550:CDS |
| CCATCGAAAGTGAGTTCAGA+AGG | 0.573318 | 2_1:+24995604 | None:intergenic |
| CAGATGATGTAGAGTTAGCA+AGG | 0.573635 | 2_1:-24995840 | Msa0202550:CDS |
| TAAAGATGTTTGTGTTTGTG+TGG | 0.576566 | 2_1:-24996520 | Msa0202550:CDS |
| TTTGTTTCCGATGGAAGCAA+AGG | 0.576921 | 2_1:-24995204 | Msa0202550:CDS |
| GACAACTATGGACTTGAATG+AGG | 0.586182 | 2_1:-24995114 | Msa0202550:CDS |
| TCTGGCAATGATCTTTGCAT+CGG | 0.586644 | 2_1:+24996740 | None:intergenic |
| AAGCTATATTGTCTGATAGA+CGG | 0.587341 | 2_1:+24996796 | None:intergenic |
| GAATTTACTCCGAATTTGGG+TGG | 0.590924 | 2_1:-24995146 | Msa0202550:CDS |
| GATGGAAGCAAAGGTTGTGA+TGG | 0.592814 | 2_1:-24995195 | Msa0202550:CDS |
| CCACGTCAATAGGAAAGTCA+AGG | 0.595019 | 2_1:-24994544 | Msa0202550:CDS |
| AACGAAATCAGCAACAACAC+TGG | 0.604355 | 2_1:-24996906 | Msa0202550:CDS |
| TCCTCGCAGACAAAATGCAC+CGG | 0.610061 | 2_1:+24996694 | None:intergenic |
| AAAGCGTAGTACGAAAGCTG+TGG | 0.616351 | 2_1:-24995560 | Msa0202550:CDS |
| AAGGGAGCCTTTACATGGTG+AGG | 0.619314 | 2_1:-24995458 | Msa0202550:CDS |
| GAGGAGTAGTTTCTTTAAGG+AGG | 0.622309 | 2_1:-24996676 | Msa0202550:CDS |
| GGCAATAGATGACATGTTGG+TGG | 0.623200 | 2_1:-24996088 | Msa0202550:CDS |
| CACGTCAATAGGAAAGTCAA+GGG | 0.630823 | 2_1:-24994543 | Msa0202550:CDS |
| ATATTGTCTGATAGACGGAT+CGG | 0.631580 | 2_1:+24996801 | None:intergenic |
| AATGGCAATAGATGACATGT+TGG | 0.633106 | 2_1:-24996091 | Msa0202550:CDS |
| AAGATCAAGAAGCTCAGTAG+TGG | 0.633228 | 2_1:+24995738 | None:intergenic |
| CATGTGATAAACTACTAACA+AGG | 0.637446 | 2_1:-24996035 | Msa0202550:CDS |
| GGTCTTCCATGAGGACAAAG+AGG | 0.638424 | 2_1:-24994603 | Msa0202550:CDS |
| AGTGAAGCGCAGACGATACG+CGG | 0.639553 | 2_1:-24994648 | Msa0202550:CDS |
| AGGACACACTACTCTAGATG+AGG | 0.655016 | 2_1:-24995803 | Msa0202550:CDS |
| TTGTCTGATAGACGGATCGG+TGG | 0.664514 | 2_1:+24996804 | None:intergenic |
| TCTTAATAAGGTCTTCCATG+AGG | 0.672788 | 2_1:-24994612 | Msa0202550:CDS |
| GGATTATTATAAATCTACTG+AGG | 0.714422 | 2_1:-24995539 | Msa0202550:CDS |
| TTCAACACTTCTGAGCAACG+AGG | 0.719258 | 2_1:+24994740 | None:intergenic |
| TTGTTGTACCTAGAAAACCG+AGG | 0.809311 | 2_1:-24995391 | Msa0202550:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATTAATTTAACTAAA+AGG | + | chr2_1:24995258-24995277 | None:intergenic | 10.0% |
| !! | ATGAAATTAATTTAACTAAA+AGG | + | chr2_1:24995258-24995277 | None:intergenic | 10.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_1:24995112-24995131 | Msa0202550:CDS | 15.0% |
| !!! | AAGATTTTTATGATTTACAT+CGG | + | chr2_1:24995748-24995767 | None:intergenic | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_1:24995748-24995767 | Msa0202550:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_1:24995749-24995768 | Msa0202550:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_1:24995813-24995832 | None:intergenic | 15.0% |
| !!! | CATTTTAGATTTAAATACAA+TGG | + | chr2_1:24996504-24996523 | None:intergenic | 15.0% |
| !! | AGCAAAATTTAACAAATAAA+TGG | + | chr2_1:24996626-24996645 | None:intergenic | 15.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_1:24995112-24995131 | Msa0202550:CDS | 15.0% |
| !!! | AAGATTTTTATGATTTACAT+CGG | + | chr2_1:24995748-24995767 | None:intergenic | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_1:24995748-24995767 | Msa0202550:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_1:24995749-24995768 | Msa0202550:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_1:24995813-24995832 | None:intergenic | 15.0% |
| !!! | CATTTTAGATTTAAATACAA+TGG | + | chr2_1:24996504-24996523 | None:intergenic | 15.0% |
| !! | AGCAAAATTTAACAAATAAA+TGG | + | chr2_1:24996626-24996645 | None:intergenic | 15.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_1:24995111-24995130 | Msa0202550:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_1:24995113-24995132 | Msa0202550:CDS | 20.0% |
| !! | TAATTTAACTAAAAGGTCAT+AGG | + | chr2_1:24995251-24995270 | None:intergenic | 20.0% |
| !! | ACTAAACATTCTTGATAAAA+TGG | - | chr2_1:24995344-24995363 | Msa0202550:intron | 20.0% |
| !! | TATATTACTTGTTTCACTAT+AGG | + | chr2_1:24995507-24995526 | None:intergenic | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_1:24995750-24995769 | Msa0202550:CDS | 20.0% |
| !!! | TTCTTTTTTTTCGATAAATG+TGG | - | chr2_1:24996126-24996145 | Msa0202550:intron | 20.0% |
| !! | TCAACATTTATTGTGAAATT+CGG | + | chr2_1:24996187-24996206 | None:intergenic | 20.0% |
| !! | TCAAAAATAAAACGAAAGAT+GGG | + | chr2_1:24996439-24996458 | None:intergenic | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_1:24996530-24996549 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_1:24996597-24996616 | Msa0202550:CDS | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_1:24995111-24995130 | Msa0202550:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_1:24995113-24995132 | Msa0202550:CDS | 20.0% |
| !! | TAATTTAACTAAAAGGTCAT+AGG | + | chr2_1:24995251-24995270 | None:intergenic | 20.0% |
| !! | ACTAAACATTCTTGATAAAA+TGG | - | chr2_1:24995344-24995363 | Msa0202550:intron | 20.0% |
| !! | TATATTACTTGTTTCACTAT+AGG | + | chr2_1:24995507-24995526 | None:intergenic | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_1:24995750-24995769 | Msa0202550:CDS | 20.0% |
| !!! | TTCTTTTTTTTCGATAAATG+TGG | - | chr2_1:24996126-24996145 | Msa0202550:intron | 20.0% |
| !! | TCAACATTTATTGTGAAATT+CGG | + | chr2_1:24996187-24996206 | None:intergenic | 20.0% |
| !! | TCAAAAATAAAACGAAAGAT+GGG | + | chr2_1:24996439-24996458 | None:intergenic | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_1:24996530-24996549 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_1:24996597-24996616 | Msa0202550:CDS | 20.0% |
| !!! | TTTCTTTAAGGAGGTTTTTA+AGG | - | chr2_1:24994786-24994805 | Msa0202550:intron | 25.0% |
| !!! | TTCTTTAAGGAGGTTTTTAA+GGG | - | chr2_1:24994787-24994806 | Msa0202550:intron | 25.0% |
| ! | AACCAATTCAGAAATTTGAA+AGG | + | chr2_1:24995031-24995050 | None:intergenic | 25.0% |
| ! | ATATACAAACGCAAACAATT+AGG | - | chr2_1:24995522-24995541 | Msa0202550:CDS | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_1:24995565-24995584 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_1:24995818-24995837 | Msa0202550:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_1:24995819-24995838 | Msa0202550:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_1:24995914-24995933 | Msa0202550:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_1:24995918-24995937 | Msa0202550:CDS | 25.0% |
| ! | CAACATTTATTGTGAAATTC+GGG | + | chr2_1:24996186-24996205 | None:intergenic | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_1:24996367-24996386 | None:intergenic | 25.0% |
| ! | CTCAAAAATAAAACGAAAGA+TGG | + | chr2_1:24996440-24996459 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_1:24996541-24996560 | Msa0202550:CDS | 25.0% |
| ! | GTTCGAAAACAATTGATATA+GGG | - | chr2_1:24996568-24996587 | Msa0202550:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_1:24996595-24996614 | None:intergenic | 25.0% |
| !!! | TTTCTTTAAGGAGGTTTTTA+AGG | - | chr2_1:24994786-24994805 | Msa0202550:intron | 25.0% |
| !!! | TTCTTTAAGGAGGTTTTTAA+GGG | - | chr2_1:24994787-24994806 | Msa0202550:intron | 25.0% |
| ! | AACCAATTCAGAAATTTGAA+AGG | + | chr2_1:24995031-24995050 | None:intergenic | 25.0% |
| ! | ATATACAAACGCAAACAATT+AGG | - | chr2_1:24995522-24995541 | Msa0202550:CDS | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_1:24995565-24995584 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_1:24995818-24995837 | Msa0202550:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_1:24995819-24995838 | Msa0202550:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_1:24995914-24995933 | Msa0202550:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_1:24995918-24995937 | Msa0202550:CDS | 25.0% |
| ! | CAACATTTATTGTGAAATTC+GGG | + | chr2_1:24996186-24996205 | None:intergenic | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_1:24996367-24996386 | None:intergenic | 25.0% |
| ! | CTCAAAAATAAAACGAAAGA+TGG | + | chr2_1:24996440-24996459 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_1:24996541-24996560 | Msa0202550:CDS | 25.0% |
| ! | GTTCGAAAACAATTGATATA+GGG | - | chr2_1:24996568-24996587 | Msa0202550:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_1:24996595-24996614 | None:intergenic | 25.0% |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_1:24994660-24994679 | None:intergenic | 30.0% | |
| TGACTAAGGATTATGATGTT+GGG | - | chr2_1:24994842-24994861 | Msa0202550:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_1:24994933-24994952 | Msa0202550:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_1:24994955-24994974 | Msa0202550:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_1:24994962-24994981 | Msa0202550:intron | 30.0% | |
| CACCTTTCAAATTTCTGAAT+TGG | - | chr2_1:24995026-24995045 | Msa0202550:intron | 30.0% | |
| !! | TAGTTGATTTGATTACTTGC+AGG | - | chr2_1:24995314-24995333 | Msa0202550:intron | 30.0% |
| CATGTGATAAACTACTAACA+AGG | - | chr2_1:24995418-24995437 | Msa0202550:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_1:24995592-24995611 | None:intergenic | 30.0% |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_1:24996082-24996101 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_1:24996214-24996233 | Msa0202550:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_1:24996277-24996296 | Msa0202550:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_1:24996303-24996322 | Msa0202550:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_1:24996304-24996323 | Msa0202550:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_1:24996360-24996379 | Msa0202550:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_1:24996374-24996393 | Msa0202550:intron | 30.0% |
| AGTACTTTCTTAAAAGTCGA+AGG | - | chr2_1:24996458-24996477 | Msa0202550:CDS | 30.0% | |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_1:24996546-24996565 | Msa0202550:CDS | 30.0% | |
| GGTTCGAAAACAATTGATAT+AGG | - | chr2_1:24996567-24996586 | Msa0202550:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_1:24996829-24996848 | Msa0202550:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_1:24996866-24996885 | Msa0202550:CDS | 30.0% | |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_1:24994660-24994679 | None:intergenic | 30.0% | |
| TGACTAAGGATTATGATGTT+GGG | - | chr2_1:24994842-24994861 | Msa0202550:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_1:24994933-24994952 | Msa0202550:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_1:24994955-24994974 | Msa0202550:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_1:24994962-24994981 | Msa0202550:intron | 30.0% | |
| CACCTTTCAAATTTCTGAAT+TGG | - | chr2_1:24995026-24995045 | Msa0202550:intron | 30.0% | |
| !! | TAGTTGATTTGATTACTTGC+AGG | - | chr2_1:24995314-24995333 | Msa0202550:intron | 30.0% |
| CATGTGATAAACTACTAACA+AGG | - | chr2_1:24995418-24995437 | Msa0202550:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_1:24995592-24995611 | None:intergenic | 30.0% |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_1:24996082-24996101 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_1:24996214-24996233 | Msa0202550:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_1:24996277-24996296 | Msa0202550:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_1:24996303-24996322 | Msa0202550:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_1:24996304-24996323 | Msa0202550:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_1:24996360-24996379 | Msa0202550:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_1:24996374-24996393 | Msa0202550:intron | 30.0% |
| AGTACTTTCTTAAAAGTCGA+AGG | - | chr2_1:24996458-24996477 | Msa0202550:CDS | 30.0% | |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_1:24996546-24996565 | Msa0202550:CDS | 30.0% | |
| GGTTCGAAAACAATTGATAT+AGG | - | chr2_1:24996567-24996586 | Msa0202550:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_1:24996829-24996848 | Msa0202550:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_1:24996866-24996885 | Msa0202550:CDS | 30.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_1:24994604-24994623 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_1:24994655-24994674 | None:intergenic | 35.0% | |
| GTGACTAAGGATTATGATGT+TGG | - | chr2_1:24994841-24994860 | Msa0202550:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+TGG | - | chr2_1:24994883-24994902 | Msa0202550:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+AGG | + | chr2_1:24994988-24995007 | None:intergenic | 35.0% | |
| TGAATTGGTTGCTCTTTATC+AGG | - | chr2_1:24995041-24995060 | Msa0202550:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_1:24995181-24995200 | Msa0202550:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_1:24995207-24995226 | Msa0202550:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_1:24995212-24995231 | None:intergenic | 35.0% | |
| AATGGCAATAGATGACATGT+TGG | - | chr2_1:24995362-24995381 | Msa0202550:intron | 35.0% | |
| CTTTCTATAGCAAACGTTTG+TGG | - | chr2_1:24995390-24995409 | Msa0202550:intron | 35.0% | |
| ACTTGTTTCACTATAGGTTG+AGG | + | chr2_1:24995501-24995520 | None:intergenic | 35.0% | |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_1:24995923-24995942 | Msa0202550:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_1:24995959-24995978 | Msa0202550:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_1:24996073-24996092 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_1:24996240-24996259 | Msa0202550:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_1:24996292-24996311 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCATCTTGAGCAG+TGG | - | chr2_1:24996670-24996689 | Msa0202550:CDS | 35.0% |
| !! | AGAAGTGTTGAACAAGATCA+TGG | - | chr2_1:24996724-24996743 | Msa0202550:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_1:24996841-24996860 | Msa0202550:CDS | 35.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_1:24994604-24994623 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_1:24994655-24994674 | None:intergenic | 35.0% | |
| GTGACTAAGGATTATGATGT+TGG | - | chr2_1:24994841-24994860 | Msa0202550:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+TGG | - | chr2_1:24994883-24994902 | Msa0202550:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+AGG | + | chr2_1:24994988-24995007 | None:intergenic | 35.0% | |
| TGAATTGGTTGCTCTTTATC+AGG | - | chr2_1:24995041-24995060 | Msa0202550:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_1:24995181-24995200 | Msa0202550:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_1:24995207-24995226 | Msa0202550:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_1:24995212-24995231 | None:intergenic | 35.0% | |
| AATGGCAATAGATGACATGT+TGG | - | chr2_1:24995362-24995381 | Msa0202550:intron | 35.0% | |
| CTTTCTATAGCAAACGTTTG+TGG | - | chr2_1:24995390-24995409 | Msa0202550:intron | 35.0% | |
| ACTTGTTTCACTATAGGTTG+AGG | + | chr2_1:24995501-24995520 | None:intergenic | 35.0% | |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_1:24995923-24995942 | Msa0202550:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_1:24995959-24995978 | Msa0202550:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_1:24996073-24996092 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_1:24996240-24996259 | Msa0202550:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_1:24996292-24996311 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCATCTTGAGCAG+TGG | - | chr2_1:24996670-24996689 | Msa0202550:CDS | 35.0% |
| !! | AGAAGTGTTGAACAAGATCA+TGG | - | chr2_1:24996724-24996743 | Msa0202550:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_1:24996841-24996860 | Msa0202550:CDS | 35.0% | |
| AACGAAATCAGCAACAACAC+TGG | - | chr2_1:24994547-24994566 | Msa0202550:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_1:24994716-24994735 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_1:24994774-24994793 | Msa0202550:intron | 40.0% | |
| ! | GAGGAGTAGTTTCTTTAAGG+AGG | - | chr2_1:24994777-24994796 | Msa0202550:intron | 40.0% |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_1:24995184-24995203 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_1:24995213-24995232 | None:intergenic | 40.0% | |
| AAGGTCATAGGTTCAAGTCT+CGG | + | chr2_1:24995239-24995258 | None:intergenic | 40.0% | |
| !!! | AGGCAGTGATTTTTCAAGAG+TGG | + | chr2_1:24995481-24995500 | None:intergenic | 40.0% |
| CAGATGATGTAGAGTTAGCA+AGG | - | chr2_1:24995613-24995632 | Msa0202550:CDS | 40.0% | |
| !!! | GCAAGGTTGCTTTTGAAAGA+AGG | - | chr2_1:24995630-24995649 | Msa0202550:CDS | 40.0% |
| AAGATCAAGAAGCTCAGTAG+TGG | + | chr2_1:24995718-24995737 | None:intergenic | 40.0% | |
| ACTACTGAGCTTCTTGATCT+TGG | - | chr2_1:24995717-24995736 | Msa0202550:CDS | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_1:24996062-24996081 | Msa0202550:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+AGG | + | chr2_1:24996169-24996188 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_1:24996249-24996268 | Msa0202550:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_1:24996259-24996278 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_1:24996307-24996326 | Msa0202550:intron | 40.0% | |
| ATCTGGTAACCACCCAAATT+CGG | + | chr2_1:24996319-24996338 | None:intergenic | 40.0% | |
| TGGTTACCAGATGACAACTA+TGG | - | chr2_1:24996327-24996346 | Msa0202550:intron | 40.0% | |
| TCAAGTCCATAGTTGTCATC+TGG | + | chr2_1:24996336-24996355 | None:intergenic | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_1:24996339-24996358 | Msa0202550:intron | 40.0% | |
| !! | ATGAAGGCATTATCTAGAGC+AGG | - | chr2_1:24996397-24996416 | Msa0202550:intron | 40.0% |
| CACGTCAATAGGAAAGTCAA+GGG | - | chr2_1:24996910-24996929 | Msa0202550:CDS | 40.0% | |
| AACGAAATCAGCAACAACAC+TGG | - | chr2_1:24994547-24994566 | Msa0202550:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_1:24994716-24994735 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_1:24994774-24994793 | Msa0202550:intron | 40.0% | |
| ! | GAGGAGTAGTTTCTTTAAGG+AGG | - | chr2_1:24994777-24994796 | Msa0202550:intron | 40.0% |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_1:24995184-24995203 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_1:24995213-24995232 | None:intergenic | 40.0% | |
| AAGGTCATAGGTTCAAGTCT+CGG | + | chr2_1:24995239-24995258 | None:intergenic | 40.0% | |
| !!! | AGGCAGTGATTTTTCAAGAG+TGG | + | chr2_1:24995481-24995500 | None:intergenic | 40.0% |
| CAGATGATGTAGAGTTAGCA+AGG | - | chr2_1:24995613-24995632 | Msa0202550:CDS | 40.0% | |
| !!! | GCAAGGTTGCTTTTGAAAGA+AGG | - | chr2_1:24995630-24995649 | Msa0202550:CDS | 40.0% |
| AAGATCAAGAAGCTCAGTAG+TGG | + | chr2_1:24995718-24995737 | None:intergenic | 40.0% | |
| ACTACTGAGCTTCTTGATCT+TGG | - | chr2_1:24995717-24995736 | Msa0202550:CDS | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_1:24996062-24996081 | Msa0202550:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+AGG | + | chr2_1:24996169-24996188 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_1:24996249-24996268 | Msa0202550:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_1:24996259-24996278 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_1:24996307-24996326 | Msa0202550:intron | 40.0% | |
| ATCTGGTAACCACCCAAATT+CGG | + | chr2_1:24996319-24996338 | None:intergenic | 40.0% | |
| TGGTTACCAGATGACAACTA+TGG | - | chr2_1:24996327-24996346 | Msa0202550:intron | 40.0% | |
| TCAAGTCCATAGTTGTCATC+TGG | + | chr2_1:24996336-24996355 | None:intergenic | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_1:24996339-24996358 | Msa0202550:intron | 40.0% | |
| !! | ATGAAGGCATTATCTAGAGC+AGG | - | chr2_1:24996397-24996416 | Msa0202550:intron | 40.0% |
| CACGTCAATAGGAAAGTCAA+GGG | - | chr2_1:24996910-24996929 | Msa0202550:CDS | 40.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_1:24994718-24994737 | Msa0202550:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_1:24994734-24994753 | None:intergenic | 45.0% | |
| AGAAACGATGCTGCAACTGA+AGG | - | chr2_1:24994816-24994835 | Msa0202550:intron | 45.0% | |
| GCAACTGAAGGAAGTGACTA+AGG | - | chr2_1:24994828-24994847 | Msa0202550:intron | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_1:24995365-24995384 | Msa0202550:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_1:24995650-24995669 | Msa0202550:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_1:24995852-24995871 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_1:24995849-24995868 | Msa0202550:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_1:24995893-24995912 | Msa0202550:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_1:24995976-24995995 | Msa0202550:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_1:24995977-24995996 | Msa0202550:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_1:24996005-24996024 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_1:24996016-24996035 | Msa0202550:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_1:24996020-24996039 | Msa0202550:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_1:24996021-24996040 | Msa0202550:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_1:24996022-24996041 | Msa0202550:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_1:24996258-24996277 | Msa0202550:intron | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_1:24996381-24996400 | Msa0202550:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_1:24996677-24996696 | Msa0202550:CDS | 45.0% | |
| TTCAACACTTCTGAGCAACG+AGG | + | chr2_1:24996716-24996735 | None:intergenic | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_1:24996859-24996878 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_1:24996899-24996918 | Msa0202550:CDS | 45.0% | |
| CTTTCCTATTGACGTGGATG+AGG | + | chr2_1:24996906-24996925 | None:intergenic | 45.0% | |
| CCTTGACTTTCCTATTGACG+TGG | + | chr2_1:24996912-24996931 | None:intergenic | 45.0% | |
| CCACGTCAATAGGAAAGTCA+AGG | - | chr2_1:24996909-24996928 | Msa0202550:CDS | 45.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_1:24994718-24994737 | Msa0202550:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_1:24994734-24994753 | None:intergenic | 45.0% | |
| AGAAACGATGCTGCAACTGA+AGG | - | chr2_1:24994816-24994835 | Msa0202550:intron | 45.0% | |
| GCAACTGAAGGAAGTGACTA+AGG | - | chr2_1:24994828-24994847 | Msa0202550:intron | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_1:24995365-24995384 | Msa0202550:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_1:24995650-24995669 | Msa0202550:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_1:24995852-24995871 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_1:24995849-24995868 | Msa0202550:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_1:24995893-24995912 | Msa0202550:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_1:24995976-24995995 | Msa0202550:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_1:24995977-24995996 | Msa0202550:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_1:24996005-24996024 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_1:24996016-24996035 | Msa0202550:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_1:24996020-24996039 | Msa0202550:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_1:24996021-24996040 | Msa0202550:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_1:24996022-24996041 | Msa0202550:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_1:24996258-24996277 | Msa0202550:intron | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_1:24996381-24996400 | Msa0202550:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_1:24996677-24996696 | Msa0202550:CDS | 45.0% | |
| TTCAACACTTCTGAGCAACG+AGG | + | chr2_1:24996716-24996735 | None:intergenic | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_1:24996859-24996878 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_1:24996899-24996918 | Msa0202550:CDS | 45.0% | |
| CTTTCCTATTGACGTGGATG+AGG | + | chr2_1:24996906-24996925 | None:intergenic | 45.0% | |
| CCTTGACTTTCCTATTGACG+TGG | + | chr2_1:24996912-24996931 | None:intergenic | 45.0% | |
| CCACGTCAATAGGAAAGTCA+AGG | - | chr2_1:24996909-24996928 | Msa0202550:CDS | 45.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_1:24994652-24994671 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_1:24994740-24994759 | Msa0202550:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_1:24994762-24994781 | None:intergenic | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_1:24995142-24995161 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_1:24995143-24995162 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_1:24995144-24995163 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_1:24995141-24995160 | Msa0202550:CDS | 50.0% | |
| AAAATGGTGAGACCCCTTGC+AGG | + | chr2_1:24995168-24995187 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_1:24995990-24996009 | Msa0202550:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_1:24995995-24996014 | Msa0202550:CDS | 50.0% | |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_1:24996676-24996695 | Msa0202550:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_1:24996678-24996697 | Msa0202550:CDS | 50.0% | |
| TGCAAGCTGCGATAGGTCAT+CGG | + | chr2_1:24996753-24996772 | None:intergenic | 50.0% | |
| CTATCGCAGCTTGCATGCAT+GGG | - | chr2_1:24996758-24996777 | Msa0202550:CDS | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_1:24996794-24996813 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_1:24996795-24996814 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_1:24996850-24996869 | Msa0202550:CDS | 50.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_1:24994652-24994671 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_1:24994740-24994759 | Msa0202550:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_1:24994762-24994781 | None:intergenic | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_1:24995142-24995161 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_1:24995143-24995162 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_1:24995144-24995163 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_1:24995141-24995160 | Msa0202550:CDS | 50.0% | |
| AAAATGGTGAGACCCCTTGC+AGG | + | chr2_1:24995168-24995187 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_1:24995990-24996009 | Msa0202550:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_1:24995995-24996014 | Msa0202550:CDS | 50.0% | |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_1:24996676-24996695 | Msa0202550:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_1:24996678-24996697 | Msa0202550:CDS | 50.0% | |
| TGCAAGCTGCGATAGGTCAT+CGG | + | chr2_1:24996753-24996772 | None:intergenic | 50.0% | |
| CTATCGCAGCTTGCATGCAT+GGG | - | chr2_1:24996758-24996777 | Msa0202550:CDS | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_1:24996794-24996813 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_1:24996795-24996814 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_1:24996850-24996869 | Msa0202550:CDS | 50.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_1:24994758-24994777 | Msa0202550:CDS | 55.0% |
| CAGCCCCGTGCACTAAAACT+AGG | - | chr2_1:24995136-24995155 | Msa0202550:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_1:24995140-24995159 | Msa0202550:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+AGG | - | chr2_1:24995151-24995170 | Msa0202550:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAA+GGG | - | chr2_1:24995152-24995171 | Msa0202550:CDS | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_1:24996684-24996703 | Msa0202550:CDS | 55.0% | |
| CCATGCATGCAAGCTGCGAT+AGG | + | chr2_1:24996760-24996779 | None:intergenic | 55.0% | |
| CCTATCGCAGCTTGCATGCA+TGG | - | chr2_1:24996757-24996776 | Msa0202550:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_1:24996805-24996824 | Msa0202550:CDS | 55.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_1:24994758-24994777 | Msa0202550:CDS | 55.0% |
| CAGCCCCGTGCACTAAAACT+AGG | - | chr2_1:24995136-24995155 | Msa0202550:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_1:24995140-24995159 | Msa0202550:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+AGG | - | chr2_1:24995151-24995170 | Msa0202550:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAA+GGG | - | chr2_1:24995152-24995171 | Msa0202550:CDS | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_1:24996684-24996703 | Msa0202550:CDS | 55.0% | |
| CCATGCATGCAAGCTGCGAT+AGG | + | chr2_1:24996760-24996779 | None:intergenic | 55.0% | |
| CCTATCGCAGCTTGCATGCA+TGG | - | chr2_1:24996757-24996776 | Msa0202550:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_1:24996805-24996824 | Msa0202550:CDS | 55.0% | |
| ACTAGGCAGGGTCCTGCAAG+GGG | - | chr2_1:24995153-24995172 | Msa0202550:CDS | 60.0% | |
| ACTAGGCAGGGTCCTGCAAG+GGG | - | chr2_1:24995153-24995172 | Msa0202550:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 24994511 | 24996964 | 24994511 | ID=Msa0202550;Name=Msa0202550 |
| chr2_1 | mRNA | 24994511 | 24996964 | 24994511 | ID=Msa0202550-mRNA-1;Parent=Msa0202550;Name=Msa0202550-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|4|0|586 |
| chr2_1 | exon | 24996413 | 24996964 | 24996413 | ID=Msa0202550-mRNA-1:exon:9608;Parent=Msa0202550-mRNA-1 |
| chr2_1 | exon | 24995392 | 24996139 | 24995392 | ID=Msa0202550-mRNA-1:exon:9607;Parent=Msa0202550-mRNA-1 |
| chr2_1 | exon | 24995057 | 24995242 | 24995057 | ID=Msa0202550-mRNA-1:exon:9606;Parent=Msa0202550-mRNA-1 |
| chr2_1 | exon | 24994511 | 24994785 | 24994511 | ID=Msa0202550-mRNA-1:exon:9605;Parent=Msa0202550-mRNA-1 |
| chr2_1 | CDS | 24996413 | 24996964 | 24996413 | ID=Msa0202550-mRNA-1:cds;Parent=Msa0202550-mRNA-1 |
| chr2_1 | CDS | 24995392 | 24996139 | 24995392 | ID=Msa0202550-mRNA-1:cds;Parent=Msa0202550-mRNA-1 |
| chr2_1 | CDS | 24995057 | 24995242 | 24995057 | ID=Msa0202550-mRNA-1:cds;Parent=Msa0202550-mRNA-1 |
| chr2_1 | CDS | 24994511 | 24994785 | 24994511 | ID=Msa0202550-mRNA-1:cds;Parent=Msa0202550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
