AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0202610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202610 MtrunA17_Chr2g0299781 77.803 446 47 4 19 435 86 508 0.0 688
Msa0202610 MtrunA17_Chr3g0135951 61.470 449 117 5 19 434 67 492 0.0 540
Msa0202610 MtrunA17_Chr1g0183651 53.972 428 136 5 19 418 93 487 4.43e-146 427
Msa0202610 MtrunA17_Chr1g0187581 53.271 428 140 6 19 418 90 485 4.83e-144 421
Msa0202610 MtrunA17_Chr7g0261491 51.852 432 144 5 19 418 93 492 1.84e-141 416
Msa0202610 MtrunA17_Chr1g0167351 52.164 439 147 8 12 420 76 481 3.54e-140 412
Msa0202610 MtrunA17_Chr1g0153321 51.773 423 138 9 22 413 84 471 1.48e-132 391
Msa0202610 MtrunA17_Chr1g0167311 49.545 440 156 9 12 420 81 485 4.95e-130 385
Msa0202610 MtrunA17_Chr6g0478601 32.425 367 175 9 40 376 105 428 3.68e-44 161
Msa0202610 MtrunA17_Chr4g0018201 31.536 371 173 10 40 377 753 1075 4.59e-41 156
Msa0202610 MtrunA17_Chr5g0428981 31.267 371 174 10 40 377 757 1079 1.09e-40 155
Msa0202610 MtrunA17_Chr7g0245031 24.372 398 187 10 36 396 138 458 1.14e-28 117
Msa0202610 MtrunA17_Chr4g0059751 26.506 415 179 13 39 412 82 411 1.88e-28 116
Msa0202610 MtrunA17_Chr2g0309421 26.720 378 218 11 64 412 223 570 1.14e-23 103
Msa0202610 MtrunA17_Chr2g0299801 84.615 52 7 1 382 433 30 80 3.80e-23 92.8
Msa0202610 MtrunA17_Chr4g0030361 27.425 299 163 9 59 353 350 598 4.94e-23 102
Msa0202610 MtrunA17_Chr2g0327561 28.383 303 166 10 59 353 669 928 1.80e-22 100
Msa0202610 MtrunA17_Chr7g0266031 25.341 367 214 11 19 353 493 831 1.37e-21 97.8
Msa0202610 MtrunA17_Chr2g0329011 27.564 312 167 13 63 360 61 327 1.68e-21 95.5
Msa0202610 MtrunA17_Chr8g0356291 26.791 321 177 11 63 353 174 466 9.94e-21 94.7
Msa0202610 MtrunA17_Chr7g0227331 24.227 388 228 13 4 353 218 577 1.37e-20 94.4
Msa0202610 MtrunA17_Chr2g0290691 25.410 366 200 12 63 393 251 578 3.30e-20 93.2
Msa0202610 MtrunA17_Chr8g0381091 26.727 333 182 13 43 351 115 409 4.42e-20 92.0
Msa0202610 MtrunA17_Chr1g0179101 24.523 367 215 12 20 353 472 809 1.94e-19 91.3
Msa0202610 MtrunA17_Chr1g0197721 26.608 342 173 10 59 393 92 362 2.09e-19 90.5
Msa0202610 MtrunA17_Chr4g0032761 26.748 329 176 12 63 359 67 362 2.37e-19 89.7
Msa0202610 MtrunA17_Chr6g0449401 23.741 417 224 13 4 353 249 638 2.59e-19 90.5
Msa0202610 MtrunA17_Chr8g0335351 25.309 324 186 11 59 353 413 709 3.36e-19 90.5
Msa0202610 MtrunA17_Chr7g0250631 25.137 366 200 12 63 392 411 738 8.81e-19 89.0
Msa0202610 MtrunA17_Chr2g0285711 27.072 362 205 14 9 348 84 408 2.11e-18 87.0
Msa0202610 MtrunA17_Chr2g0312641 27.063 303 178 11 61 353 139 408 7.40e-18 85.5
Msa0202610 MtrunA17_Chr7g0234641 24.397 373 215 13 1 354 16 340 2.25e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202610 AT4G33080.1 60.780 436 119 4 19 425 67 479 0.0 523
Msa0202610 AT4G33080.2 60.502 438 121 4 19 427 67 481 0.0 523
Msa0202610 AT2G19400.1 60.412 437 120 4 19 425 78 491 0.0 520
Msa0202610 AT3G23310.1 54.253 435 141 7 12 418 86 490 6.28e-150 438
Msa0202610 AT4G14350.2 53.563 435 142 6 12 418 85 487 9.73e-148 432
Msa0202610 AT4G14350.1 53.563 435 142 6 12 418 85 487 9.73e-148 432
Msa0202610 AT4G14350.4 53.563 435 142 6 12 418 85 487 9.73e-148 432
Msa0202610 AT4G14350.3 53.563 435 142 6 12 418 85 487 1.02e-147 431
Msa0202610 AT2G20470.3 52.103 428 143 6 19 418 97 490 2.35e-139 409
Msa0202610 AT2G20470.2 52.103 428 143 6 19 418 97 490 1.51e-138 409
Msa0202610 AT2G20470.1 52.103 428 143 6 19 418 97 490 1.51e-138 409
Msa0202610 AT1G03920.1 51.636 428 146 5 19 418 110 504 1.70e-137 406
Msa0202610 AT1G03920.3 51.636 428 146 5 19 418 110 504 1.70e-137 406
Msa0202610 AT1G03920.2 51.415 424 145 5 23 418 1 391 1.33e-136 400
Msa0202610 AT1G30640.3 50.467 428 156 6 20 419 1 400 5.01e-130 384
Msa0202610 AT1G30640.2 50.350 429 157 6 19 419 93 493 1.32e-129 385
Msa0202610 AT1G30640.1 50.350 429 157 6 19 419 93 493 1.32e-129 385
Msa0202610 AT5G09890.2 49.412 425 156 6 19 414 75 469 9.03e-128 379
Msa0202610 AT5G09890.1 49.412 425 156 6 19 414 75 469 9.86e-128 379
Msa0202610 AT1G48490.4 32.065 368 171 9 40 377 823 1141 4.04e-43 162
Msa0202610 AT1G48490.3 32.065 368 171 9 40 377 822 1140 4.56e-43 162
Msa0202610 AT1G48490.2 32.065 368 171 9 40 377 822 1140 4.56e-43 162
Msa0202610 AT1G48490.1 32.065 368 171 9 40 377 822 1140 4.56e-43 162
Msa0202610 AT1G45160.2 29.425 435 207 14 40 425 664 1047 7.43e-43 162
Msa0202610 AT3G17850.1 32.086 374 167 12 40 376 876 1199 8.25e-43 162
Msa0202610 AT5G62310.1 31.806 371 173 11 40 377 748 1071 8.46e-43 161
Msa0202610 AT1G45160.1 30.534 393 184 13 40 394 664 1005 5.41e-41 156
Msa0202610 AT3G08730.1 26.400 375 157 12 41 378 129 421 1.02e-27 115
Msa0202610 AT3G08730.2 26.400 375 157 12 41 378 129 421 1.02e-27 115
Msa0202610 AT3G10540.1 27.063 303 148 8 59 356 86 320 1.54e-23 103
Msa0202610 AT5G04510.2 26.733 303 149 8 59 356 85 319 9.36e-23 100
Msa0202610 AT3G12690.1 27.564 312 178 11 63 353 230 514 2.16e-22 100
Msa0202610 AT3G12690.3 27.564 312 178 11 63 353 230 514 2.16e-22 100
Msa0202610 AT3G12690.2 27.564 312 178 11 63 353 230 514 2.16e-22 100
Msa0202610 AT5G04510.1 26.733 303 149 8 59 356 85 319 2.31e-22 99.8
Msa0202610 AT1G16440.1 25.566 309 185 10 63 353 160 441 8.01e-22 98.2
Msa0202610 AT3G08720.1 25.067 375 162 12 41 378 135 427 1.37e-21 97.4
Msa0202610 AT3G08720.3 25.067 375 162 12 41 378 135 427 1.37e-21 97.4
Msa0202610 AT3G08720.4 25.067 375 162 12 41 378 135 427 1.37e-21 97.4
Msa0202610 AT3G08720.2 25.067 375 162 12 41 378 135 427 1.37e-21 97.4
Msa0202610 AT5G55910.2 24.806 387 226 11 4 353 93 451 3.65e-21 96.3
Msa0202610 AT5G55910.1 24.806 387 226 11 4 353 93 451 3.65e-21 96.3
Msa0202610 AT3G44610.1 26.444 329 182 10 63 359 124 424 4.64e-21 95.5
Msa0202610 AT2G36350.1 26.276 392 216 15 4 353 543 903 6.55e-21 96.3
Msa0202610 AT3G27580.2 25.568 352 196 11 63 378 225 546 5.89e-20 92.8
Msa0202610 AT3G27580.1 25.568 352 196 11 63 378 225 546 5.89e-20 92.8
Msa0202610 AT3G52890.2 26.426 333 172 12 63 353 583 884 1.28e-19 92.4
Msa0202610 AT3G52890.4 26.426 333 172 12 63 353 583 884 1.28e-19 92.4
Msa0202610 AT3G52890.1 26.426 333 172 12 63 353 583 884 1.28e-19 92.4
Msa0202610 AT3G52890.3 26.426 333 172 12 63 353 583 884 1.28e-19 92.4
Msa0202610 AT5G58140.3 25.138 362 218 10 4 359 561 875 3.06e-19 91.3
Msa0202610 AT3G20830.1 27.346 373 214 15 49 396 53 393 4.46e-19 89.4
Msa0202610 AT5G58140.6 25.281 356 213 10 4 353 561 869 6.28e-19 90.1
Msa0202610 AT5G58140.7 25.281 356 213 10 4 353 561 869 6.28e-19 90.1
Msa0202610 AT5G58140.5 25.281 356 213 10 4 353 561 869 6.28e-19 90.1
Msa0202610 AT5G58140.2 25.281 356 213 10 4 353 561 869 6.28e-19 90.1
Msa0202610 AT5G58140.1 25.281 356 213 10 4 353 561 869 6.28e-19 90.1
Msa0202610 AT2G44830.2 25.515 388 221 13 59 414 404 755 7.24e-19 89.7
Msa0202610 AT2G44830.3 25.515 388 221 13 59 414 404 755 7.24e-19 89.7
Msa0202610 AT2G44830.1 25.515 388 221 13 59 414 404 755 7.24e-19 89.7
Msa0202610 AT5G04510.3 26.119 268 128 7 62 327 88 287 1.92e-18 85.9
Msa0202610 AT3G45780.2 27.425 299 168 11 59 353 704 957 8.71e-18 86.7
Msa0202610 AT3G45780.1 27.425 299 168 11 59 353 704 957 8.71e-18 86.7
Msa0202610 AT5G45810.1 25.503 298 134 10 58 349 68 283 2.18e-17 84.7
Msa0202610 AT1G51170.1 26.829 328 191 11 49 358 54 350 7.74e-17 82.4
Msa0202610 AT3G14370.1 25.329 304 187 9 59 353 129 401 3.52e-15 77.8

Find 119 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCTAGCATTTCTACTATT+TGG 0.037866 2_1:-25094415 None:intergenic
TCCGGAAGTGTTACTGAAAA+AGG 0.183363 2_1:+25094754 Msa0202610:CDS
CTGATGTACAGGTTGCTTTC+TGG 0.215853 2_1:+25095660 Msa0202610:CDS
ACCTTTCTGCATGTTGTTAC+AGG 0.222033 2_1:-25095258 None:intergenic
GTCTGTTAGCGCTGAAATTA+TGG 0.260584 2_1:-25097941 None:intergenic
GTCAGGATCATCCTTGGTTT+AGG 0.284567 2_1:+25095816 Msa0202610:intron
AACCTTCTCTTAGACATAAA+TGG 0.288023 2_1:+25094265 Msa0202610:CDS
GCCTAGCATTTCTACTATTT+GGG 0.299174 2_1:-25094414 None:intergenic
TTTGACCTTGTAACCATTAC+TGG 0.304692 2_1:+25093489 Msa0202610:CDS
TATAAGTGAAAAGGAAATAT+TGG 0.316651 2_1:+25094348 Msa0202610:CDS
CATATGAAATTGTCGGATTT+CGG 0.325598 2_1:+25094289 Msa0202610:CDS
TGAATTCTTATATCTTATAA+TGG 0.329496 2_1:+25093999 Msa0202610:CDS
TCAGGATCATCCTTGGTTTA+GGG 0.336370 2_1:+25095817 Msa0202610:intron
GGTGATGTCCATTGAGTATC+AGG 0.337001 2_1:-25097791 None:intergenic
TACATCAGATCTTTCGCTTC+GGG 0.345663 2_1:-25095645 None:intergenic
TTACATCGCCCAAACCGTTT+TGG 0.357039 2_1:+25094094 Msa0202610:CDS
ATTATAAGATATAAGAATTC+AGG 0.358998 2_1:-25093997 None:intergenic
CTTCTTGTGTTGCAAATAGA+TGG 0.364624 2_1:+25097885 Msa0202610:three_prime_UTR
CTCAATGGCCAAAACGGTTT+GGG 0.365550 2_1:-25094102 None:intergenic
ATTGAATTGATATGTTCTTC+TGG 0.367087 2_1:-25093394 None:intergenic
ACAGGATCATCAGAGTAAAA+TGG 0.374636 2_1:-25095240 None:intergenic
CTTGGTTTAGGGATGTCCTA+TGG 0.386044 2_1:+25095828 Msa0202610:CDS
ACTCAATGGCCAAAACGGTT+TGG 0.394014 2_1:-25094103 None:intergenic
GTACATCAGATCTTTCGCTT+CGG 0.397244 2_1:-25095646 None:intergenic
AACGATACAATGGACGTTGA+TGG 0.406147 2_1:+25094385 Msa0202610:CDS
ATGCCAGCTCGATCTGGTTC+CGG 0.406698 2_1:+25096076 Msa0202610:CDS
ATTACTGGCAGGGGAGCCTT+TGG 0.409433 2_1:+25093504 Msa0202610:CDS
AACTCAAGCAAAACATAATC+TGG 0.410177 2_1:-25094793 None:intergenic
TCATAATGTACATTACAATA+AGG 0.412420 2_1:-25097861 None:intergenic
TCTGGTGTTCCACATAGGCT+TGG 0.426577 2_1:+25095678 Msa0202610:CDS
TTCAACATTGGCAAATGAAT+AGG 0.428084 2_1:+25094461 Msa0202610:CDS
AAGTTTCACAATGCAGTCAT+TGG 0.440331 2_1:-25093956 None:intergenic
ACTTCCGGAGCAATATAATC+TGG 0.458145 2_1:-25094740 None:intergenic
CAACCAATGCCAGCTCGATC+TGG 0.458810 2_1:+25096070 Msa0202610:CDS
GGTGTCAATCTTGCCTCCTC+CGG 0.466257 2_1:-25095624 None:intergenic
TCTATCACCTATAAGTGAAA+AGG 0.469401 2_1:+25094339 Msa0202610:CDS
AGGCTTTCCGGTGCTACAAA+AGG 0.471006 2_1:+25093351 None:intergenic
ACTTGCTGCAGGTGGTCTCT+TGG 0.475914 2_1:+25095183 Msa0202610:CDS
ACCTTGTAACCATTACTGGC+AGG 0.480379 2_1:+25093493 Msa0202610:CDS
TCATGCAGAACCTAGTGTAC+AGG 0.482895 2_1:+25097969 Msa0202610:three_prime_UTR
GTGTTTATGAATAGACTCAA+TGG 0.485025 2_1:-25094117 None:intergenic
GCAAATGAATAGGAGGAAGT+TGG 0.486917 2_1:+25094471 Msa0202610:CDS
AGATTCACCTTCTTCGATGA+TGG 0.489151 2_1:+25097908 Msa0202610:three_prime_UTR
TCACTCTTCACAAGCACCAT+AGG 0.490682 2_1:-25097833 None:intergenic
GCATAGGTGGTTGCACCCTA+TGG 0.493575 2_1:+25097817 Msa0202610:three_prime_UTR
CTCTCGAACAACTTCAACAT+TGG 0.493774 2_1:+25094449 Msa0202610:CDS
TTAGGGATGTCCTATGGGAT+AGG 0.496565 2_1:+25095834 Msa0202610:CDS
ATAGTAGAAATGCTAGGCGT+TGG 0.497241 2_1:+25094419 Msa0202610:CDS
AACTCCAGATTATATTGCTC+CGG 0.497621 2_1:+25094736 Msa0202610:CDS
CCCTGCCAGTAATGGTTACA+AGG 0.498456 2_1:-25093494 None:intergenic
ATGTACATTACAATAAGGTT+AGG 0.502163 2_1:-25097856 None:intergenic
TGCTTTCTGGTGTTCCACAT+AGG 0.503733 2_1:+25095673 Msa0202610:CDS
ATAAACACAATTACATTCAT+CGG 0.504009 2_1:+25094132 Msa0202610:CDS
ATAATGTATGAGATGCTTGT+CGG 0.505033 2_1:+25095210 Msa0202610:CDS
AAATGGTCATATGAAATTGT+CGG 0.505117 2_1:+25094282 Msa0202610:CDS
ACTGAAGGATTTAGAGAGCA+AGG 0.506245 2_1:+25093419 Msa0202610:CDS
TTTCCTCAGGGATATAAAAC+CGG 0.508430 2_1:+25094240 Msa0202610:intron
GGGTGCAACCACCTATGCTT+TGG 0.509978 2_1:-25097812 None:intergenic
CTATTCCACCTGATACTCAA+TGG 0.510767 2_1:+25097783 Msa0202610:three_prime_UTR
CCACTTAAAATTTCCGGAGG+AGG 0.518016 2_1:+25095611 Msa0202610:CDS
AATAGACTCAATGGCCAAAA+CGG 0.519010 2_1:-25094108 None:intergenic
TTAATTGTCAGGATCATCCT+TGG 0.520834 2_1:+25095810 Msa0202610:intron
CTTATAATGGAATATTTACC+TGG 0.521516 2_1:+25094012 Msa0202610:CDS
TTGGTTTAGGGATGTCCTAT+GGG 0.523289 2_1:+25095829 Msa0202610:CDS
CATCTATTTGCAACACAAGA+AGG 0.524519 2_1:-25097884 None:intergenic
ATATCAATTCAATTTACTGA+AGG 0.524837 2_1:+25093404 Msa0202610:CDS
ATGTCTAAGAGAAGGTTGTC+CGG 0.525788 2_1:-25094259 None:intergenic
CATTTAAACCACGAGTCGTA+GGG 0.526424 2_1:+25095876 Msa0202610:CDS
GAACCAGATCGAGCTGGCAT+TGG 0.535687 2_1:-25096073 None:intergenic
AAAGGCTCCCCTGCCAGTAA+TGG 0.536772 2_1:-25093502 None:intergenic
GCATTTAAACCACGAGTCGT+AGG 0.537871 2_1:+25095875 Msa0202610:CDS
AAGCGAAAGATCTGATGTAC+AGG 0.538119 2_1:+25095649 Msa0202610:CDS
TCGTGGTTTAAATGCTGCCT+CGG 0.539591 2_1:-25095867 None:intergenic
CCTCTGGTTCCAAGCCTATG+TGG 0.547989 2_1:-25095687 None:intergenic
GATAGATTTGAGACTTCAAG+TGG 0.551658 2_1:-25094322 None:intergenic
GACCATTTATGTCTAAGAGA+AGG 0.552873 2_1:-25094267 None:intergenic
TATAATGACTTTGTTGATGA+GGG 0.554021 2_1:+25094041 Msa0202610:CDS
AACATTGGCAAATGAATAGG+AGG 0.556644 2_1:+25094464 Msa0202610:CDS
ACACAATTACATTCATCGGT+TGG 0.557691 2_1:+25094136 Msa0202610:CDS
TCCTGTAACAACATGCAGAA+AGG 0.559761 2_1:+25095257 Msa0202610:CDS
GATATCAATCCCTGTACACT+AGG 0.561267 2_1:-25097979 None:intergenic
CACTCTTCACAAGCACCATA+GGG 0.561992 2_1:-25097832 None:intergenic
AAAGACACCATCATCGAAGA+AGG 0.565791 2_1:-25097915 None:intergenic
CAATGTTGAAGTTGTTCGAG+AGG 0.570068 2_1:-25094448 None:intergenic
CATGCAGAACCTAGTGTACA+GGG 0.570955 2_1:+25097970 Msa0202610:three_prime_UTR
CCTTGTAACCATTACTGGCA+GGG 0.575454 2_1:+25093494 Msa0202610:CDS
CCAACAAAACTGAGATCTTG+AGG 0.583231 2_1:-25096479 None:intergenic
TCAAGTTCCCCTACGACTCG+TGG 0.586291 2_1:-25095884 None:intergenic
ATATAATGACTTTGTTGATG+AGG 0.588311 2_1:+25094040 Msa0202610:CDS
CTTGTAACCATTACTGGCAG+GGG 0.601093 2_1:+25093495 Msa0202610:CDS
TGATAACTTGAACGATACAA+TGG 0.601820 2_1:+25094375 Msa0202610:CDS
TGGCAGGGGAGCCTTTGGTG+AGG 0.602955 2_1:+25093509 Msa0202610:CDS
GAGGGGAAGCGTCATTCTGT+TGG 0.603758 2_1:+25096530 Msa0202610:CDS
TTTCATAGAGCCTATCCCAT+AGG 0.610659 2_1:-25095844 None:intergenic
TTGAGCATGTTAGAGCTGAA+AGG 0.613243 2_1:+25093914 Msa0202610:CDS
GGACATCACCAAAGCATAGG+TGG 0.614636 2_1:+25097804 Msa0202610:three_prime_UTR
CCACATAGGCTTGGAACCAG+AGG 0.615730 2_1:+25095687 Msa0202610:CDS
TGGTTCCGGACCCATCAGAA+AGG 0.619158 2_1:+25096090 Msa0202610:CDS
ATGACGCTTCCCCTCGACAG+CGG 0.624516 2_1:-25096522 None:intergenic
TCCCAAATAGTAGAAATGCT+AGG 0.628968 2_1:+25094413 Msa0202610:CDS
GGTCCGGAACCAGATCGAGC+TGG 0.629039 2_1:-25096079 None:intergenic
ATCACTTTGTACCTCACCAA+AGG 0.634426 2_1:-25093520 None:intergenic
AAAATGTTATGACTTGCTGC+AGG 0.634849 2_1:+25095172 Msa0202610:CDS
AATGGACATCACCAAAGCAT+AGG 0.635367 2_1:+25097801 Msa0202610:three_prime_UTR
ATAATCTGGAGTTCCAGCAG+TGG 0.637684 2_1:-25094726 None:intergenic
ATAATGGAATATTTACCTGG+TGG 0.648694 2_1:+25094015 Msa0202610:CDS
AAACCACTTAAAATTTCCGG+AGG 0.652753 2_1:+25095608 Msa0202610:CDS
AAGAAACTTTGACAAAAGTG+TGG 0.654532 2_1:+25094064 Msa0202610:CDS
ATGTTATGACTTGCTGCAGG+TGG 0.660417 2_1:+25095175 Msa0202610:CDS
AGTGTGTACAGATTGTCCAC+TGG 0.663266 2_1:+25095583 Msa0202610:intron
GGATCATCAGAGTAAAATGG+AGG 0.667639 2_1:-25095237 None:intergenic
GCAAGGAGACTGAGTATATG+CGG 0.674574 2_1:+25093436 Msa0202610:CDS
CATAGGACATCCCTAAACCA+AGG 0.680987 2_1:-25095827 None:intergenic
AAAGTCATTATATCACCACC+AGG 0.685675 2_1:-25094030 None:intergenic
ATTTAAACCACGAGTCGTAG+GGG 0.689017 2_1:+25095877 Msa0202610:CDS
GGATAGGCTCTATGAAACCG+AGG 0.705246 2_1:+25095850 Msa0202610:CDS
ATAGATTTGAGACTTCAAGT+GGG 0.713621 2_1:-25094321 None:intergenic
GATGTCCATTGAGTATCAGG+TGG 0.714596 2_1:-25097788 None:intergenic
GTGGAGTCGACTGATGATCG+TGG 0.730670 2_1:-25097658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTGTATTTTTTTATT+TGG + chr2_1:25094505-25094524 Msa0202610:intron 10.0%
!!! ATAATGAAAATTTCATATTT+TGG - chr2_1:25095452-25095471 None:intergenic 10.0%
!! ATCAATAAAGTAAATTTCAT+TGG + chr2_1:25093872-25093891 Msa0202610:intron 15.0%
!! ATTATAAGATATAAGAATTC+AGG - chr2_1:25094000-25094019 None:intergenic 15.0%
!! TGAATTCTTATATCTTATAA+TGG + chr2_1:25093999-25094018 Msa0202610:CDS 15.0%
!!! ATATGAAATTTTCATTATGT+AGG + chr2_1:25095454-25095473 Msa0202610:intron 15.0%
!! GAAAAAATAGAGAAATAATA+GGG - chr2_1:25095507-25095526 None:intergenic 15.0%
!! AGAAAAAATAGAGAAATAAT+AGG - chr2_1:25095508-25095527 None:intergenic 15.0%
!!! ATTTTAGTACCTAAATTATA+TGG - chr2_1:25097353-25097372 None:intergenic 15.0%
!! ATATCAATTCAATTTACTGA+AGG + chr2_1:25093404-25093423 Msa0202610:CDS 20.0%
!!! TCTCAATATAAAGATTTTAG+AGG - chr2_1:25093789-25093808 None:intergenic 20.0%
!! ATAAACACAATTACATTCAT+CGG + chr2_1:25094132-25094151 Msa0202610:CDS 20.0%
!! AAACTTATAACTGCAAAATA+TGG - chr2_1:25094205-25094224 None:intergenic 20.0%
!!! AATATTTCCTTTTCACTTAT+AGG - chr2_1:25094349-25094368 None:intergenic 20.0%
!! TATAAGTGAAAAGGAAATAT+TGG + chr2_1:25094348-25094367 Msa0202610:CDS 20.0%
!!! CATCTCTTTATTTTATGTTT+TGG + chr2_1:25094817-25094836 Msa0202610:CDS 20.0%
!! AAAAATAACTTAGAACATTG+TGG - chr2_1:25094906-25094925 None:intergenic 20.0%
!! TAATGACGAATTCTTAAAAA+TGG - chr2_1:25094971-25094990 None:intergenic 20.0%
!!! AGTCATAACATTTTTATTCT+TGG - chr2_1:25095166-25095185 None:intergenic 20.0%
!!! AAATTTCATATTTTGGTCAA+GGG - chr2_1:25095445-25095464 None:intergenic 20.0%
!!! AAAATTTCATATTTTGGTCA+AGG - chr2_1:25095446-25095465 None:intergenic 20.0%
!! TTTAATACTAATCCATACTA+GGG - chr2_1:25095762-25095781 None:intergenic 20.0%
!! ATTTAATACTAATCCATACT+AGG - chr2_1:25095763-25095782 None:intergenic 20.0%
!! TTCATTGTAATTGTCTTAAT+AGG + chr2_1:25096042-25096061 Msa0202610:intron 20.0%
!! TAATTGTTTATATATCCTAG+TGG - chr2_1:25096208-25096227 None:intergenic 20.0%
!! TCATACAAATCTATAATCAT+TGG + chr2_1:25096282-25096301 Msa0202610:intron 20.0%
!!! ATATGTTACTATTCTTTTGA+TGG + chr2_1:25096578-25096597 Msa0202610:intron 20.0%
!!! GAAGAAGAAAATTTACTTTT+AGG + chr2_1:25097267-25097286 Msa0202610:intron 20.0%
!! TTATATGGTCCATATAATTT+AGG + chr2_1:25097341-25097360 Msa0202610:intron 20.0%
!! TTTAGGTACTAAAATCAATA+AGG + chr2_1:25097358-25097377 Msa0202610:intron 20.0%
!! GACTAAAAAAACAAATTACA+TGG + chr2_1:25097478-25097497 Msa0202610:intron 20.0%
!! TCATAATGTACATTACAATA+AGG - chr2_1:25097864-25097883 None:intergenic 20.0%
! ATTGAATTGATATGTTCTTC+TGG - chr2_1:25093397-25093416 None:intergenic 25.0%
! TTTCATGGCATATATATTAC+CGG - chr2_1:25093578-25093597 None:intergenic 25.0%
!!! AGACTTTTTCAACTTTTTCA+TGG - chr2_1:25093593-25093612 None:intergenic 25.0%
! GATGATGATAAGTTAAACAA+TGG - chr2_1:25093855-25093874 None:intergenic 25.0%
!! CTTATAATGGAATATTTACC+TGG + chr2_1:25094012-25094031 Msa0202610:CDS 25.0%
! ATATAATGACTTTGTTGATG+AGG + chr2_1:25094040-25094059 Msa0202610:CDS 25.0%
!! TATAATGACTTTGTTGATGA+GGG + chr2_1:25094041-25094060 Msa0202610:CDS 25.0%
! AAATGGTCATATGAAATTGT+CGG + chr2_1:25094282-25094301 Msa0202610:CDS 25.0%
!! TTCTATTTCACATCTTTTTC+TGG + chr2_1:25094536-25094555 Msa0202610:intron 25.0%
! GTGATAAAATGCTATCAAAA+TGG - chr2_1:25094633-25094652 None:intergenic 25.0%
! TTGAAATTAAAACACTTCGA+AGG + chr2_1:25094932-25094951 Msa0202610:intron 25.0%
!! TTTTCCAGAAATATCCAATT+AGG + chr2_1:25095022-25095041 Msa0202610:intron 25.0%
! TTTCCAGAAATATCCAATTA+GGG + chr2_1:25095023-25095042 Msa0202610:intron 25.0%
!! GAAAAATGTTTTACCCTAAT+TGG - chr2_1:25095039-25095058 None:intergenic 25.0%
!! TTTTATTCTTGACCTGAAAA+TGG + chr2_1:25095106-25095125 Msa0202610:intron 25.0%
!! ACATAAATATCACCATTTTC+AGG - chr2_1:25095121-25095140 None:intergenic 25.0%
! ATGGTGATATTTATGTCTTA+TGG + chr2_1:25095125-25095144 Msa0202610:intron 25.0%
!! TGGTGTATGTATATTGTTTT+TGG - chr2_1:25095410-25095429 None:intergenic 25.0%
! AAAACAATATACATACACCA+TGG + chr2_1:25095410-25095429 Msa0202610:intron 25.0%
! GAAAAACCACTTAAAATTTC+CGG + chr2_1:25095605-25095624 Msa0202610:CDS 25.0%
!!! TTTAATTTCTTTTGATCCTC+TGG - chr2_1:25095706-25095725 None:intergenic 25.0%
! AAATTAAAGTGTGTAAGATG+TGG + chr2_1:25095718-25095737 Msa0202610:intron 25.0%
! TTAATACTAATCCATACTAG+GGG - chr2_1:25095761-25095780 None:intergenic 25.0%
!! GAATTTTATGAAATTCGAAG+AGG + chr2_1:25095913-25095932 Msa0202610:CDS 25.0%
!!! CTTTTTTGCATCATTCTATT+CGG + chr2_1:25096166-25096185 Msa0202610:intron 25.0%
! TTACAAATTTCATTTCCACT+AGG + chr2_1:25096190-25096209 Msa0202610:intron 25.0%
! AATGTTATGTGTAAGTTCAA+CGG - chr2_1:25096257-25096276 None:intergenic 25.0%
! CAATCAACTTATATTTAACC+TGG - chr2_1:25096401-25096420 None:intergenic 25.0%
!! GGCAATAAAAATTTGAAACA+TGG - chr2_1:25096626-25096645 None:intergenic 25.0%
! CACAAAAAGAAAATGGAAAT+TGG - chr2_1:25096647-25096666 None:intergenic 25.0%
! ACTTTCATGGAAAATACAAA+GGG - chr2_1:25096771-25096790 None:intergenic 25.0%
! TACTTTCATGGAAAATACAA+AGG - chr2_1:25096772-25096791 None:intergenic 25.0%
! CAAAGATTAAAGCTAAAACA+AGG - chr2_1:25097293-25097312 None:intergenic 25.0%
!!! CTTGTTTTAGCTTTAATCTT+TGG + chr2_1:25097291-25097310 Msa0202610:intron 25.0%
!!! TTTGGAATATTTTTCTGTGT+TGG + chr2_1:25097309-25097328 Msa0202610:intron 25.0%
!! TGTTGGAATTAGTTCTTATA+TGG + chr2_1:25097326-25097345 Msa0202610:intron 25.0%
!! AAACAAATTACATGGACTAA+AGG + chr2_1:25097486-25097505 Msa0202610:intron 25.0%
! ATTAACTGAAATATCTGAGA+AGG - chr2_1:25097561-25097580 None:intergenic 25.0%
!!! GATATTCTACCACTTTTTTT+TGG + chr2_1:25097607-25097626 Msa0202610:intron 25.0%
! GTAATTATCAAAGCTGAAAA+AGG - chr2_1:25097698-25097717 None:intergenic 25.0%
! ATGTACATTACAATAAGGTT+AGG - chr2_1:25097859-25097878 None:intergenic 25.0%
TTGATATCACAGCAAAATGT+GGG + chr2_1:25093713-25093732 Msa0202610:intron 30.0%
!! TTGGATTTGTTTTCCATCTT+AGG + chr2_1:25093891-25093910 Msa0202610:intron 30.0%
! ATAATGGAATATTTACCTGG+TGG + chr2_1:25094015-25094034 Msa0202610:CDS 30.0%
AAGAAACTTTGACAAAAGTG+TGG + chr2_1:25094064-25094083 Msa0202610:CDS 30.0%
GTGTTTATGAATAGACTCAA+TGG - chr2_1:25094120-25094139 None:intergenic 30.0%
AACCTTCTCTTAGACATAAA+TGG + chr2_1:25094265-25094284 Msa0202610:CDS 30.0%
CATATGAAATTGTCGGATTT+CGG + chr2_1:25094289-25094308 Msa0202610:CDS 30.0%
! ATAGATTTGAGACTTCAAGT+GGG - chr2_1:25094324-25094343 None:intergenic 30.0%
TCTATCACCTATAAGTGAAA+AGG + chr2_1:25094339-25094358 Msa0202610:CDS 30.0%
TGATAACTTGAACGATACAA+TGG + chr2_1:25094375-25094394 Msa0202610:CDS 30.0%
TTCAACATTGGCAAATGAAT+AGG + chr2_1:25094461-25094480 Msa0202610:CDS 30.0%
! CCTTTTGTAAGTGAAAAAGA+AGG - chr2_1:25094603-25094622 None:intergenic 30.0%
!! CCTTCTTTTTCACTTACAAA+AGG + chr2_1:25094600-25094619 Msa0202610:intron 30.0%
AACTCAAGCAAAACATAATC+TGG - chr2_1:25094796-25094815 None:intergenic 30.0%
GTATCGCAATACTTCAATAT+GGG - chr2_1:25094850-25094869 None:intergenic 30.0%
AGTATCGCAATACTTCAATA+TGG - chr2_1:25094851-25094870 None:intergenic 30.0%
AGAATTCGTCATTATTCGTT+CGG + chr2_1:25094977-25094996 Msa0202610:intron 30.0%
TTACCCTAATTGGATATTTC+TGG - chr2_1:25095029-25095048 None:intergenic 30.0%
ATAATGTATGAGATGCTTGT+CGG + chr2_1:25095210-25095229 Msa0202610:CDS 30.0%
!!! ATATTTTGGTCAAGGGTTTT+CGG - chr2_1:25095438-25095457 None:intergenic 30.0%
! TATGTTGTACTCATTTTACC+TGG + chr2_1:25095555-25095574 Msa0202610:intron 30.0%
!! ATTTTAAGTGGTTTTTCCAG+TGG - chr2_1:25095602-25095621 None:intergenic 30.0%
TAATACTAATCCATACTAGG+GGG - chr2_1:25095760-25095779 None:intergenic 30.0%
ATTAACGATTAACGTCATCA+GGG - chr2_1:25095795-25095814 None:intergenic 30.0%
AATTAACGATTAACGTCATC+AGG - chr2_1:25095796-25095815 None:intergenic 30.0%
AAATTCGAAGAGGTAAAAGA+TGG + chr2_1:25095923-25095942 Msa0202610:intron 30.0%
! TGATATCTTTTGCTTTGACT+TGG + chr2_1:25095995-25096014 Msa0202610:intron 30.0%
! TAGAGTTTTACCTTTCTGAT+GGG - chr2_1:25096103-25096122 None:intergenic 30.0%
! ATAGAGTTTTACCTTTCTGA+TGG - chr2_1:25096104-25096123 None:intergenic 30.0%
! AACCTGGAAATTTTGTATCA+GGG - chr2_1:25096385-25096404 None:intergenic 30.0%
! TAACCTGGAAATTTTGTATC+AGG - chr2_1:25096386-25096405 None:intergenic 30.0%
TCTCATGCACAAAAAGAAAA+TGG - chr2_1:25096654-25096673 None:intergenic 30.0%
! CAGTTTAATGTTATTTGCCA+CGG + chr2_1:25096675-25096694 Msa0202610:intron 30.0%
! ATAAATTTCAGCATTTTCCG+TGG - chr2_1:25096695-25096714 None:intergenic 30.0%
ATGGAAAATACAAAGGGTAA+AGG - chr2_1:25096765-25096784 None:intergenic 30.0%
CTATTAAGTCACTACTTTCA+TGG - chr2_1:25096784-25096803 None:intergenic 30.0%
CATGAAAGTAGTGACTTAAT+AGG + chr2_1:25096782-25096801 Msa0202610:intron 30.0%
GTCAGTTAATGTCATCAAAT+TGG + chr2_1:25097035-25097054 Msa0202610:intron 30.0%
CAATCTGATTTAGCCTATAA+TGG + chr2_1:25097103-25097122 Msa0202610:intron 30.0%
ATTGTCTGAAAAAATGTAGC+AGG - chr2_1:25097145-25097164 None:intergenic 30.0%
! GTTAAAGTCTTGTAATATGC+AGG - chr2_1:25097385-25097404 None:intergenic 30.0%
CATGTGATATTTGTTCATGT+TGG - chr2_1:25097407-25097426 None:intergenic 30.0%
!!! TACGTGCACAATTTTGTTTT+TGG - chr2_1:25097453-25097472 None:intergenic 30.0%
GTATCAAGTCCAAAAAAAAG+TGG - chr2_1:25097619-25097638 None:intergenic 30.0%
! TTTTGGACTTGATACAGAAA+AGG + chr2_1:25097624-25097643 Msa0202610:intron 30.0%
TTTGGACTTGATACAGAAAA+GGG + chr2_1:25097625-25097644 Msa0202610:intron 30.0%
!!! AAAGGTTTTATTACTGTGTG+TGG - chr2_1:25097680-25097699 None:intergenic 30.0%
TTTGACCTTGTAACCATTAC+TGG + chr2_1:25093489-25093508 Msa0202610:CDS 35.0%
!! CACATTTTGCTGTGATATCA+AGG - chr2_1:25093714-25093733 None:intergenic 35.0%
CTTGATATCACAGCAAAATG+TGG + chr2_1:25093712-25093731 Msa0202610:intron 35.0%
AAGTTTCACAATGCAGTCAT+TGG - chr2_1:25093959-25093978 None:intergenic 35.0%
AAAGTCATTATATCACCACC+AGG - chr2_1:25094033-25094052 None:intergenic 35.0%
AATAGACTCAATGGCCAAAA+CGG - chr2_1:25094111-25094130 None:intergenic 35.0%
ACACAATTACATTCATCGGT+TGG + chr2_1:25094136-25094155 Msa0202610:CDS 35.0%
TTTCCTCAGGGATATAAAAC+CGG + chr2_1:25094240-25094259 Msa0202610:intron 35.0%
GACCATTTATGTCTAAGAGA+AGG - chr2_1:25094270-25094289 None:intergenic 35.0%
! GATAGATTTGAGACTTCAAG+TGG - chr2_1:25094325-25094344 None:intergenic 35.0%
TCCCAAATAGTAGAAATGCT+AGG + chr2_1:25094413-25094432 Msa0202610:CDS 35.0%
GCCTAGCATTTCTACTATTT+GGG - chr2_1:25094417-25094436 None:intergenic 35.0%
AACATTGGCAAATGAATAGG+AGG + chr2_1:25094464-25094483 Msa0202610:CDS 35.0%
ATGAATAGACAAGCTGAAGA+AGG - chr2_1:25094689-25094708 None:intergenic 35.0%
CAGCTTGTCTATTCATTTCA+TGG + chr2_1:25094693-25094712 Msa0202610:intron 35.0%
TTGTCTATTCATTTCATGGC+AGG + chr2_1:25094697-25094716 Msa0202610:intron 35.0%
AACTCCAGATTATATTGCTC+CGG + chr2_1:25094736-25094755 Msa0202610:CDS 35.0%
! GTGTTACTGAAAAAGGGTTA+TGG + chr2_1:25094761-25094780 Msa0202610:CDS 35.0%
GAATTCGTCATTATTCGTTC+GGG + chr2_1:25094978-25094997 Msa0202610:intron 35.0%
!! AAAATGTTATGACTTGCTGC+AGG + chr2_1:25095172-25095191 Msa0202610:CDS 35.0%
ACAGGATCATCAGAGTAAAA+TGG - chr2_1:25095243-25095262 None:intergenic 35.0%
TGCTTAAGGAGAGAAGAATA+AGG - chr2_1:25095297-25095316 None:intergenic 35.0%
!! AGACTGAAAAGAAGTGCTTA+AGG - chr2_1:25095311-25095330 None:intergenic 35.0%
AAACCACTTAAAATTTCCGG+AGG + chr2_1:25095608-25095627 Msa0202610:CDS 35.0%
GACGTTAATCGTTAATTGTC+AGG + chr2_1:25095799-25095818 Msa0202610:intron 35.0%
TTAATTGTCAGGATCATCCT+TGG + chr2_1:25095810-25095829 Msa0202610:intron 35.0%
TCAGGGTAAATAACTAGAAC+TGG - chr2_1:25096368-25096387 None:intergenic 35.0%
TACCCTGATACAAAATTTCC+AGG + chr2_1:25096380-25096399 Msa0202610:intron 35.0%
TTAGATATGCATCATGCTCA+AGG + chr2_1:25096880-25096899 Msa0202610:intron 35.0%
TAGATATGCATCATGCTCAA+GGG + chr2_1:25096881-25096900 Msa0202610:intron 35.0%
TAACCATGAGAATGATTGCT+TGG + chr2_1:25096934-25096953 Msa0202610:intron 35.0%
ATGTGTGCACATGTTATTCT+TGG + chr2_1:25096988-25097007 Msa0202610:intron 35.0%
GACAATTACGAACATACATG+AGG - chr2_1:25097018-25097037 None:intergenic 35.0%
TCATCAAATTGGTCCTTTAG+TGG + chr2_1:25097046-25097065 Msa0202610:intron 35.0%
CTATCAATTTCGTCCACTAA+AGG - chr2_1:25097062-25097081 None:intergenic 35.0%
TGATTTAGCCTATAATGGTG+TGG + chr2_1:25097108-25097127 Msa0202610:intron 35.0%
AACAAAATTGTGCACGTATC+AGG + chr2_1:25097455-25097474 Msa0202610:intron 35.0%
ACAAAATTGTGCACGTATCA+GGG + chr2_1:25097456-25097475 Msa0202610:intron 35.0%
!!! TAACCAACCAGTTTTGTTGT+AGG + chr2_1:25097745-25097764 Msa0202610:intron 35.0%
AGAATCACCTACAACAAAAC+TGG - chr2_1:25097755-25097774 None:intergenic 35.0%
CATCTATTTGCAACACAAGA+AGG - chr2_1:25097887-25097906 None:intergenic 35.0%
CTTCTTGTGTTGCAAATAGA+TGG + chr2_1:25097885-25097904 Msa0202610:three_prime_UTR 35.0%
! TCTAACTCCTTTTGTAGCAC+CGG - chr2_1:25093361-25093380 None:intergenic 40.0%
ACTGAAGGATTTAGAGAGCA+AGG + chr2_1:25093419-25093438 Msa0202610:CDS 40.0%
ATCACTTTGTACCTCACCAA+AGG - chr2_1:25093523-25093542 None:intergenic 40.0%
GAGGTACAAAGTGATTTCAC+AGG + chr2_1:25093528-25093547 Msa0202610:intron 40.0%
ACCGCAATATAGAACCATGA+GGG - chr2_1:25093678-25093697 None:intergenic 40.0%
! ATGGTTCTATATTGCGGTCA+CGG + chr2_1:25093680-25093699 Msa0202610:intron 40.0%
TGGCATCACAATTGCAATCA+CGG - chr2_1:25093757-25093776 None:intergenic 40.0%
!! GATTTTAGAGGTCTTTGCAG+TGG - chr2_1:25093777-25093796 None:intergenic 40.0%
TGAGACGACAATTGCATTTG+CGG + chr2_1:25093804-25093823 Msa0202610:intron 40.0%
CTAACATGCTCAACCTAAGA+TGG - chr2_1:25093907-25093926 None:intergenic 40.0%
TTGAGCATGTTAGAGCTGAA+AGG + chr2_1:25093914-25093933 Msa0202610:CDS 40.0%
TTTATATCCCTGAGGAAACG+AGG - chr2_1:25094238-25094257 None:intergenic 40.0%
ATGTCTAAGAGAAGGTTGTC+CGG - chr2_1:25094262-25094281 None:intergenic 40.0%
AACGATACAATGGACGTTGA+TGG + chr2_1:25094385-25094404 Msa0202610:CDS 40.0%
CGCCTAGCATTTCTACTATT+TGG - chr2_1:25094418-25094437 None:intergenic 40.0%
ATAGTAGAAATGCTAGGCGT+TGG + chr2_1:25094419-25094438 Msa0202610:CDS 40.0%
CAATGTTGAAGTTGTTCGAG+AGG - chr2_1:25094451-25094470 None:intergenic 40.0%
CTCTCGAACAACTTCAACAT+TGG + chr2_1:25094449-25094468 Msa0202610:CDS 40.0%
GCAAATGAATAGGAGGAAGT+TGG + chr2_1:25094471-25094490 Msa0202610:CDS 40.0%
ACTTCCGGAGCAATATAATC+TGG - chr2_1:25094743-25094762 None:intergenic 40.0%
!! TCCGGAAGTGTTACTGAAAA+AGG + chr2_1:25094754-25094773 Msa0202610:CDS 40.0%
!!! CCCTTTTTCAGTAACACTTC+CGG - chr2_1:25094758-25094777 None:intergenic 40.0%
!! CCGGAAGTGTTACTGAAAAA+GGG + chr2_1:25094755-25094774 Msa0202610:CDS 40.0%
GGATCATCAGAGTAAAATGG+AGG - chr2_1:25095240-25095259 None:intergenic 40.0%
TCCTGTAACAACATGCAGAA+AGG + chr2_1:25095257-25095276 Msa0202610:CDS 40.0%
ACCTTTCTGCATGTTGTTAC+AGG - chr2_1:25095261-25095280 None:intergenic 40.0%
TACATCAGATCTTTCGCTTC+GGG - chr2_1:25095648-25095667 None:intergenic 40.0%
GTACATCAGATCTTTCGCTT+CGG - chr2_1:25095649-25095668 None:intergenic 40.0%
AAGCGAAAGATCTGATGTAC+AGG + chr2_1:25095649-25095668 Msa0202610:CDS 40.0%
TCAGGATCATCCTTGGTTTA+GGG + chr2_1:25095817-25095836 Msa0202610:intron 40.0%
TTGGTTTAGGGATGTCCTAT+GGG + chr2_1:25095829-25095848 Msa0202610:CDS 40.0%
TTTCATAGAGCCTATCCCAT+AGG - chr2_1:25095847-25095866 None:intergenic 40.0%
CATTTAAACCACGAGTCGTA+GGG + chr2_1:25095876-25095895 Msa0202610:CDS 40.0%
ATTTAAACCACGAGTCGTAG+GGG + chr2_1:25095877-25095896 Msa0202610:CDS 40.0%
!! TTTTACCTTTCTGATGGGTC+CGG - chr2_1:25096098-25096117 None:intergenic 40.0%
AGAACTGGTGAATTCAACAG+TGG - chr2_1:25096353-25096372 None:intergenic 40.0%
CCAACAAAACTGAGATCTTG+AGG - chr2_1:25096482-25096501 None:intergenic 40.0%
!! CCTCAAGATCTCAGTTTTGT+TGG + chr2_1:25096479-25096498 Msa0202610:CDS 40.0%
TCACCAAGCAATCATTCTCA+TGG - chr2_1:25096940-25096959 None:intergenic 40.0%
! GAGAATGATTGCTTGGTGAT+TGG + chr2_1:25096941-25096960 Msa0202610:intron 40.0%
TTGGTGAAATCCAACTTGCA+AGG + chr2_1:25096960-25096979 Msa0202610:intron 40.0%
CACATTAAGTCCTTGCAAGT+TGG - chr2_1:25096973-25096992 None:intergenic 40.0%
ACGTTAGTCCACACCATTAT+AGG - chr2_1:25097119-25097138 None:intergenic 40.0%
TCACCTACAACAAAACTGGT+TGG - chr2_1:25097751-25097770 None:intergenic 40.0%
CTATTCCACCTGATACTCAA+TGG + chr2_1:25097783-25097802 Msa0202610:three_prime_UTR 40.0%
AATGGACATCACCAAAGCAT+AGG + chr2_1:25097801-25097820 Msa0202610:three_prime_UTR 40.0%
AGATTCACCTTCTTCGATGA+TGG + chr2_1:25097908-25097927 Msa0202610:three_prime_UTR 40.0%
AAAGACACCATCATCGAAGA+AGG - chr2_1:25097918-25097937 None:intergenic 40.0%
! GTCTGTTAGCGCTGAAATTA+TGG - chr2_1:25097944-25097963 None:intergenic 40.0%
GCAAGGAGACTGAGTATATG+CGG + chr2_1:25093436-25093455 Msa0202610:CDS 45.0%
ACCTTGTAACCATTACTGGC+AGG + chr2_1:25093493-25093512 Msa0202610:CDS 45.0%
CCTTGTAACCATTACTGGCA+GGG + chr2_1:25093494-25093513 Msa0202610:CDS 45.0%
CTTGTAACCATTACTGGCAG+GGG + chr2_1:25093495-25093514 Msa0202610:CDS 45.0%
CTTTGTCGCGAGAAGAAATC+CGG + chr2_1:25093556-25093575 Msa0202610:intron 45.0%
! AAAGTCTGAGATGCTCAGCA+TGG + chr2_1:25093606-25093625 Msa0202610:intron 45.0%
! AAGTCTGAGATGCTCAGCAT+GGG + chr2_1:25093607-25093626 Msa0202610:intron 45.0%
AGTGAATGTTCTTGCCCTCA+TGG + chr2_1:25093661-25093680 Msa0202610:intron 45.0%
! GCCCTCATGGTTCTATATTG+CGG + chr2_1:25093674-25093693 Msa0202610:intron 45.0%
GACCGCAATATAGAACCATG+AGG - chr2_1:25093679-25093698 None:intergenic 45.0%
! TTACATCGCCCAAACCGTTT+TGG + chr2_1:25094094-25094113 Msa0202610:CDS 45.0%
CTCAATGGCCAAAACGGTTT+GGG - chr2_1:25094105-25094124 None:intergenic 45.0%
ACTCAATGGCCAAAACGGTT+TGG - chr2_1:25094106-25094125 None:intergenic 45.0%
TAACGTTTCCTCGTTTCCTC+AGG + chr2_1:25094227-25094246 Msa0202610:intron 45.0%
AACGTTTCCTCGTTTCCTCA+GGG + chr2_1:25094228-25094247 Msa0202610:intron 45.0%
!! TGTCCGGTTTTATATCCCTG+AGG - chr2_1:25094246-25094265 None:intergenic 45.0%
! ATAATCTGGAGTTCCAGCAG+TGG - chr2_1:25094729-25094748 None:intergenic 45.0%
ACTGAAAAAGGGTTATGGCG+TGG + chr2_1:25094766-25094785 Msa0202610:CDS 45.0%
!! ATGTTATGACTTGCTGCAGG+TGG + chr2_1:25095175-25095194 Msa0202610:CDS 45.0%
AGTGTGTACAGATTGTCCAC+TGG + chr2_1:25095583-25095602 Msa0202610:intron 45.0%
! CCTCCTCCGGAAATTTTAAG+TGG - chr2_1:25095614-25095633 None:intergenic 45.0%
CCACTTAAAATTTCCGGAGG+AGG + chr2_1:25095611-25095630 Msa0202610:CDS 45.0%
! CTGATGTACAGGTTGCTTTC+TGG + chr2_1:25095660-25095679 Msa0202610:CDS 45.0%
! TGCTTTCTGGTGTTCCACAT+AGG + chr2_1:25095673-25095692 Msa0202610:CDS 45.0%
CATACTAGGGGGAAAAGAGA+GGG - chr2_1:25095749-25095768 None:intergenic 45.0%
GTCAGGATCATCCTTGGTTT+AGG + chr2_1:25095816-25095835 Msa0202610:intron 45.0%
CATAGGACATCCCTAAACCA+AGG - chr2_1:25095830-25095849 None:intergenic 45.0%
CTTGGTTTAGGGATGTCCTA+TGG + chr2_1:25095828-25095847 Msa0202610:CDS 45.0%
TTAGGGATGTCCTATGGGAT+AGG + chr2_1:25095834-25095853 Msa0202610:CDS 45.0%
TCGTGGTTTAAATGCTGCCT+CGG - chr2_1:25095870-25095889 None:intergenic 45.0%
GCATTTAAACCACGAGTCGT+AGG + chr2_1:25095875-25095894 Msa0202610:CDS 45.0%
CTTGACACTACAGATTGTGC+AGG + chr2_1:25095967-25095986 Msa0202610:intron 45.0%
! TAAGAATTTTGCCGCTGTCG+AGG + chr2_1:25096511-25096530 Msa0202610:CDS 45.0%
! AAGAATTTTGCCGCTGTCGA+GGG + chr2_1:25096512-25096531 Msa0202610:CDS 45.0%
CAGAGACGAAAAGCAAAGAC+TGG - chr2_1:25097221-25097240 None:intergenic 45.0%
GATGTCCATTGAGTATCAGG+TGG - chr2_1:25097791-25097810 None:intergenic 45.0%
GGTGATGTCCATTGAGTATC+AGG - chr2_1:25097794-25097813 None:intergenic 45.0%
CACTCTTCACAAGCACCATA+GGG - chr2_1:25097835-25097854 None:intergenic 45.0%
TCACTCTTCACAAGCACCAT+AGG - chr2_1:25097836-25097855 None:intergenic 45.0%
TCATGCAGAACCTAGTGTAC+AGG + chr2_1:25097969-25097988 Msa0202610:three_prime_UTR 45.0%
CATGCAGAACCTAGTGTACA+GGG + chr2_1:25097970-25097989 Msa0202610:three_prime_UTR 45.0%
CCCTGCCAGTAATGGTTACA+AGG - chr2_1:25093497-25093516 None:intergenic 50.0%
GCAAGACGCACAAAAGCTCA+CGG + chr2_1:25095375-25095394 Msa0202610:intron 50.0%
ATCTGTACACACTCGTCACC+AGG - chr2_1:25095576-25095595 None:intergenic 50.0%
TCTGGTGTTCCACATAGGCT+TGG + chr2_1:25095678-25095697 Msa0202610:CDS 50.0%
CCATACTAGGGGGAAAAGAG+AGG - chr2_1:25095750-25095769 None:intergenic 50.0%
! CCTCTCTTTTCCCCCTAGTA+TGG + chr2_1:25095747-25095766 Msa0202610:intron 50.0%
GGATAGGCTCTATGAAACCG+AGG + chr2_1:25095850-25095869 Msa0202610:CDS 50.0%
! AGAATTTTGCCGCTGTCGAG+GGG + chr2_1:25096513-25096532 Msa0202610:CDS 50.0%
GGACATCACCAAAGCATAGG+TGG + chr2_1:25097804-25097823 Msa0202610:three_prime_UTR 50.0%
AAAGGCTCCCCTGCCAGTAA+TGG - chr2_1:25093505-25093524 None:intergenic 55.0%
ATTACTGGCAGGGGAGCCTT+TGG + chr2_1:25093504-25093523 Msa0202610:CDS 55.0%
TGAGATGCTCAGCATGGGAC+AGG + chr2_1:25093612-25093631 Msa0202610:intron 55.0%
! TGGCAGGCATTTTCCACTGC+TGG + chr2_1:25094713-25094732 Msa0202610:intron 55.0%
! ACTTGCTGCAGGTGGTCTCT+TGG + chr2_1:25095183-25095202 Msa0202610:CDS 55.0%
! GTCAAGGGTTTTCGGCACCA+TGG - chr2_1:25095430-25095449 None:intergenic 55.0%
GGTGTCAATCTTGCCTCCTC+CGG - chr2_1:25095627-25095646 None:intergenic 55.0%
! CCTCTGGTTCCAAGCCTATG+TGG - chr2_1:25095690-25095709 None:intergenic 55.0%
CCACATAGGCTTGGAACCAG+AGG + chr2_1:25095687-25095706 Msa0202610:CDS 55.0%
TCAAGTTCCCCTACGACTCG+TGG - chr2_1:25095887-25095906 None:intergenic 55.0%
CAACCAATGCCAGCTCGATC+TGG + chr2_1:25096070-25096089 Msa0202610:CDS 55.0%
GAACCAGATCGAGCTGGCAT+TGG - chr2_1:25096076-25096095 None:intergenic 55.0%
! ATGCCAGCTCGATCTGGTTC+CGG + chr2_1:25096076-25096095 Msa0202610:CDS 55.0%
TGGTTCCGGACCCATCAGAA+AGG + chr2_1:25096090-25096109 Msa0202610:CDS 55.0%
!! GAGGGGAAGCGTCATTCTGT+TGG + chr2_1:25096530-25096549 Msa0202610:CDS 55.0%
GTGGAGTCGACTGATGATCG+TGG - chr2_1:25097661-25097680 None:intergenic 55.0%
GGGTGCAACCACCTATGCTT+TGG - chr2_1:25097815-25097834 None:intergenic 55.0%
GCATAGGTGGTTGCACCCTA+TGG + chr2_1:25097817-25097836 Msa0202610:three_prime_UTR 55.0%
ATGACGCTTCCCCTCGACAG+CGG - chr2_1:25096525-25096544 None:intergenic 60.0%
TGGCAGGGGAGCCTTTGGTG+AGG + chr2_1:25093509-25093528 Msa0202610:CDS 65.0%
GGTCCGGAACCAGATCGAGC+TGG - chr2_1:25096082-25096101 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 25093354 25097999 25093354 ID=Msa0202610;Name=Msa0202610
chr2_1 mRNA 25093354 25097999 25093354 ID=Msa0202610-mRNA-1;Parent=Msa0202610;Name=Msa0202610-mRNA-1;_AED=0.16;_eAED=0.18;_QI=0|0.6|0.54|1|0.6|0.45|11|276|435
chr2_1 exon 25093354 25093530 25093354 ID=Msa0202610-mRNA-1:exon:9622;Parent=Msa0202610-mRNA-1
chr2_1 exon 25093913 25094157 25093913 ID=Msa0202610-mRNA-1:exon:9623;Parent=Msa0202610-mRNA-1
chr2_1 exon 25094249 25094492 25094249 ID=Msa0202610-mRNA-1:exon:9624;Parent=Msa0202610-mRNA-1
chr2_1 exon 25094719 25094838 25094719 ID=Msa0202610-mRNA-1:exon:9625;Parent=Msa0202610-mRNA-1
chr2_1 exon 25095168 25095278 25095168 ID=Msa0202610-mRNA-1:exon:9626;Parent=Msa0202610-mRNA-1
chr2_1 exon 25095594 25095725 25095594 ID=Msa0202610-mRNA-1:exon:9627;Parent=Msa0202610-mRNA-1
chr2_1 exon 25095821 25095934 25095821 ID=Msa0202610-mRNA-1:exon:9628;Parent=Msa0202610-mRNA-1
chr2_1 exon 25096064 25096111 25096064 ID=Msa0202610-mRNA-1:exon:9629;Parent=Msa0202610-mRNA-1
chr2_1 exon 25096467 25096581 25096467 ID=Msa0202610-mRNA-1:exon:9630;Parent=Msa0202610-mRNA-1
chr2_1 exon 25097641 25097685 25097641 ID=Msa0202610-mRNA-1:exon:9631;Parent=Msa0202610-mRNA-1
chr2_1 exon 25097767 25097999 25097767 ID=Msa0202610-mRNA-1:exon:9632;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25093354 25093530 25093354 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25093913 25094157 25093913 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25094249 25094492 25094249 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25094719 25094838 25094719 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25095168 25095278 25095168 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25095594 25095725 25095594 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25095821 25095934 25095821 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25096064 25096111 25096064 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25096467 25096581 25096467 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 CDS 25097641 25097642 25097641 ID=Msa0202610-mRNA-1:cds;Parent=Msa0202610-mRNA-1
chr2_1 three_prime_UTR 25097643 25097685 25097643 ID=Msa0202610-mRNA-1:three_prime_utr;Parent=Msa0202610-mRNA-1
chr2_1 three_prime_UTR 25097767 25097999 25097767 ID=Msa0202610-mRNA-1:three_prime_utr;Parent=Msa0202610-mRNA-1
Gene Sequence

>Msa0202610

CTTTCCGGTGCTACAAAAGGAGTTAGAATCTTCGCATCTACCAGAAGAACATATCAATTCAATTTACTGAAGGATTTAGAGAGCAAGGAGACTGAGTATATGCGGTTAAAAACGCATAAAATATGTGTTGATGATTTTGACCTTGTAACCATTACTGGCAGGGGAGCCTTTGGTGAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCAATGACTGCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATATTTACCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAAAAGTGTGGCAAGATTTTACATCGCCCAAACCGTTTTGGCCATTGAGTCTATTCATAAACACAATTACATTCATCGGTTGGGATATAAAACCGGACAACCTTCTCTTAGACATAAATGGTCATATGAAATTGTCGGATTTCGGTCTTCGCAACCCACTTGAAGTCTCAAATCTATCACCTATAAGTGAAAAGGAAATATTGGATGATGATAACTTGAACGATACAATGGACGTTGATGGAAATTTCCCAAATAGTAGAAATGCTAGGCGTTGGAAAAGTCCTCTCGAACAACTTCAACATTGGCAAATGAATAGGAGGAAGTTGGCATTTTCCACTGCTGGAACTCCAGATTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGCGTGGAACTCCAGATTATGTTTTGCTTGAGTTGCATCTCTTTATTTTATGTTTTGAATAAAAATGTTATGACTTGCTGCAGGTGGTCTCTTGGCGCTATAATGTATGAGATGCTTGTCGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCAGAAAGATTGTCCACTGGAAAAACCACTTAAAATTTCCGGAGGAGGCAAGATTGACACCCGAAGCGAAAGATCTGATGTACAGGTTGCTTTCTGGTGTTCCACATAGGCTTGGAACCAGAGGATCAAAAGAAATTAAAGATCATCCTTGGTTTAGGGATGTCCTATGGGATAGGCTCTATGAAACCGAGGCAGCATTTAAACCACGAGTCGTAGGGGAACTTGACACTCAGAATTTTATGAAATTCGAAGAGGTTGAACAACCAATGCCAGCTCGATCTGGTTCCGGACCCATCAGAAAGACACTCTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAGAATTTTGCCGCTGTCGAGGGGAAGCGTCATTCTGTTGGTAAGTACTTTTCACATAAAAGCACAATATAA
Protein sequence

>Msa0202610

LSGATKGVRIFASTRRTYQFNLLKDLESKETEYMRLKTHKICVDDFDLVTITGRGAFGEVEHVRAERNVLAEVANDCIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTKVWQDFTSPKPFWPLSLFINTITFIGWDIKPDNLLLDINGHMKLSDFGLRNPLEVSNLSPISEKEILDDDNLNDTMDVDGNFPNSRNARRWKSPLEQLQHWQMNRRKLAFSTAGTPDYIAPEVLLKKGYGVELQIMFCLSCISLFYVLNKNVMTCCRWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLMYRLLSGVPHRLGTRGSKEIKDHPWFRDVLWDRLYETEAAFKPRVVGELDTQNFMKFEEVEQPMPARSGSGPIRKTLLTPQDLSFVGYTYKNFAAVEGKRHSVGKYFSHKSTI*