AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0203590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203590 MtrunA17_Chr2g0301301 71.429 133 3 1 115 212 419 551 3.35e-55 184
Msa0203590 MtrunA17_Chr2g0297761 49.438 89 45 0 23 111 146 234 5.83e-24 96.7
Msa0203590 MtrunA17_Chr2g0297771 49.438 89 45 0 23 111 146 234 5.83e-24 96.7
Msa0203590 MtrunA17_Chr2g0297781 49.438 89 45 0 23 111 146 234 5.83e-24 96.7
Msa0203590 MtrunA17_Chr2g0297731 47.826 92 47 1 23 114 145 235 2.93e-21 89.4
Msa0203590 MtrunA17_Chr4g0048951 33.094 139 66 3 100 212 253 390 1.62e-15 74.3
Msa0203590 MtrunA17_Chr4g0048581 37.778 135 49 4 99 204 675 803 1.83e-15 74.7
Msa0203590 MtrunA17_Chr8g0360591 36.364 143 53 5 91 203 181 315 2.55e-15 73.6
Msa0203590 MtrunA17_Chr8g0358911 35.664 143 54 4 91 203 183 317 2.56e-15 73.6
Msa0203590 MtrunA17_Chr4g0064201 40.367 109 34 3 126 203 282 390 9.13e-15 72.4
Msa0203590 MtrunA17_Chr2g0300711 39.496 119 38 5 126 210 248 366 3.81e-14 70.5
Msa0203590 MtrunA17_Chr2g0312561 36.364 143 53 5 91 203 180 314 4.06e-14 70.1
Msa0203590 MtrunA17_Chr7g0245571 37.273 110 38 2 126 204 260 369 8.98e-14 69.3
Msa0203590 MtrunA17_Chr4g0069061 34.646 127 52 3 108 203 62 188 9.23e-14 67.4
Msa0203590 MtrunA17_Chr4g0020081 33.824 136 54 4 99 204 655 784 9.35e-14 69.7
Msa0203590 MtrunA17_Chr2g0319101 34.783 115 49 2 115 203 260 374 1.26e-13 68.9
Msa0203590 MtrunA17_Chr4g0023221 33.083 133 55 4 99 203 874 1000 1.34e-13 69.3
Msa0203590 MtrunA17_Chr7g0273311 30.534 131 64 2 96 199 53 183 1.43e-13 67.0
Msa0203590 MtrunA17_Chr4g0046511 33.766 154 66 6 79 205 824 968 1.68e-13 68.9
Msa0203590 MtrunA17_Chr5g0409041 31.206 141 61 3 99 210 447 580 1.72e-13 68.6
Msa0203590 MtrunA17_Chr1g0191381 36.264 91 54 2 96 185 285 372 1.88e-13 68.2
Msa0203590 MtrunA17_Chr2g0280191 34.146 123 49 4 121 212 851 972 1.98e-13 68.6
Msa0203590 MtrunA17_Chr4g0060011 32.800 125 54 2 115 210 468 591 2.43e-13 68.2
Msa0203590 MtrunA17_Chr8g0392271 30.827 133 60 1 108 208 726 858 2.46e-13 68.2
Msa0203590 MtrunA17_Chr3g0140871 31.111 135 58 3 99 204 832 960 2.49e-13 68.2
Msa0203590 MtrunA17_Chr3g0140861 34.483 145 56 5 91 203 797 934 2.62e-13 68.2
Msa0203590 MtrunA17_Chr2g0312571 37.063 143 52 5 91 203 185 319 3.05e-13 67.8
Msa0203590 MtrunA17_Chr5g0408941 33.088 136 53 3 108 208 241 373 3.10e-13 67.8
Msa0203590 MtrunA17_Chr4g0017251 37.615 109 38 2 125 203 839 947 3.42e-13 67.8
Msa0203590 MtrunA17_Chr4g0071371 32.258 124 53 2 108 200 281 404 3.50e-13 67.8
Msa0203590 MtrunA17_Chr4g0072901 28.676 136 67 1 99 204 179 314 3.79e-13 67.4
Msa0203590 MtrunA17_Chr7g0217041 33.884 121 54 3 108 203 673 792 3.97e-13 67.8
Msa0203590 MtrunA17_Chr8g0340051 33.974 156 64 7 90 212 164 313 4.26e-13 67.0
Msa0203590 MtrunA17_Chr0c01g0489481 30.435 115 47 1 126 207 493 607 4.92e-13 67.4
Msa0203590 MtrunA17_Chr3g0136421 29.012 162 82 3 76 204 200 361 5.25e-13 67.0
Msa0203590 MtrunA17_Chr4g0023111 33.813 139 56 4 99 207 858 990 5.60e-13 67.4
Msa0203590 MtrunA17_Chr5g0416011 37.615 109 37 2 126 203 308 416 5.90e-13 67.0
Msa0203590 MtrunA17_Chr4g0048801 40.909 88 44 4 95 181 659 739 6.46e-13 67.0
Msa0203590 MtrunA17_Chr7g0226891 35.897 117 46 3 115 203 203 318 6.62e-13 66.6
Msa0203590 MtrunA17_Chr8g0380441 33.628 113 44 3 126 207 242 354 7.16e-13 66.6
Msa0203590 MtrunA17_Chr1g0189871 30.172 116 48 1 126 208 966 1081 7.30e-13 67.0
Msa0203590 MtrunA17_Chr4g0044691 34.545 110 46 1 126 209 490 599 8.10e-13 66.6
Msa0203590 MtrunA17_Chr4g0042381 31.852 135 56 5 99 203 597 725 9.20e-13 66.6
Msa0203590 MtrunA17_Chr2g0293071 28.169 142 65 4 93 204 196 330 9.33e-13 66.2
Msa0203590 MtrunA17_Chr4g0042391 31.852 135 56 5 99 203 597 725 9.73e-13 66.6
Msa0203590 MtrunA17_Chr4g0035464 33.333 132 50 5 113 210 837 964 9.88e-13 66.6
Msa0203590 MtrunA17_Chr5g0403891 56.000 50 22 0 126 175 418 467 1.02e-12 66.2
Msa0203590 MtrunA17_Chr4g0054521 33.913 115 47 3 126 211 854 968 1.04e-12 66.6
Msa0203590 MtrunA17_Chr1g0150741 29.012 162 82 3 76 204 200 361 1.11e-12 65.9
Msa0203590 MtrunA17_Chr2g0280751 34.074 135 54 3 99 204 670 798 1.45e-12 66.2
Msa0203590 MtrunA17_Chr2g0313911 33.333 123 51 4 113 205 224 345 1.48e-12 65.5
Msa0203590 MtrunA17_Chr7g0275131 36.752 117 42 3 126 210 239 355 1.54e-12 65.9
Msa0203590 MtrunA17_Chr7g0216551 37.168 113 34 3 126 204 296 405 1.55e-12 65.9
Msa0203590 MtrunA17_Chr7g0221191 29.060 117 49 2 126 208 557 673 1.57e-12 65.9
Msa0203590 MtrunA17_Chr8g0359581 38.144 97 39 2 129 204 81 177 1.64e-12 63.5
Msa0203590 MtrunA17_Chr3g0084441 31.034 145 62 6 91 204 643 780 1.67e-12 65.9
Msa0203590 MtrunA17_Chr4g0042351 31.852 135 56 5 99 203 597 725 1.78e-12 65.9
Msa0203590 MtrunA17_Chr5g0435211 35.652 115 37 3 126 206 249 360 1.81e-12 65.5
Msa0203590 MtrunA17_Chr6g0485761 32.743 113 42 2 126 204 457 569 2.07e-12 65.5
Msa0203590 MtrunA17_Chr8g0373501 41.935 62 36 0 126 187 499 560 2.16e-12 65.5
Msa0203590 MtrunA17_Chr2g0288121 42.857 84 39 3 99 182 187 261 2.24e-12 65.1
Msa0203590 MtrunA17_Chr5g0428101 31.852 135 56 5 99 203 645 773 2.26e-12 65.5
Msa0203590 MtrunA17_Chr4g0070411 35.398 113 36 3 126 204 254 363 2.30e-12 65.5
Msa0203590 MtrunA17_Chr2g0293081 29.710 138 65 4 98 204 531 667 2.31e-12 65.5
Msa0203590 MtrunA17_Chr1g0165221 38.272 81 50 0 125 205 1018 1098 2.39e-12 65.5
Msa0203590 MtrunA17_Chr7g0250491 35.514 107 41 1 125 203 950 1056 2.42e-12 65.5
Msa0203590 MtrunA17_Chr8g0340091 31.944 144 62 4 90 203 667 804 2.55e-12 65.5
Msa0203590 MtrunA17_Chr4g0064511 37.963 108 37 1 126 203 381 488 2.66e-12 65.1
Msa0203590 MtrunA17_Chr5g0428581 32.432 111 46 2 126 207 209 319 2.77e-12 64.7
Msa0203590 MtrunA17_Chr1g0202331 34.746 118 46 3 118 204 688 805 3.01e-12 65.1
Msa0203590 MtrunA17_Chr8g0380681 40.000 80 46 1 108 187 466 543 3.29e-12 65.1
Msa0203590 MtrunA17_Chr8g0380681 39.241 79 46 1 115 193 1143 1219 2.79e-11 62.4
Msa0203590 MtrunA17_Chr3g0092301 30.000 150 68 4 91 210 67 209 3.44e-12 63.5
Msa0203590 MtrunA17_Chr4g0019371 35.514 107 45 1 126 208 835 941 3.79e-12 64.7
Msa0203590 MtrunA17_Chr7g0239361 43.590 78 38 2 110 187 510 581 3.99e-12 64.7
Msa0203590 MtrunA17_Chr4g0019041 35.922 103 42 1 126 204 840 942 4.02e-12 64.7
Msa0203590 MtrunA17_Chr7g0236641 28.571 147 66 4 99 212 669 809 4.21e-12 64.7
Msa0203590 MtrunA17_Chr6g0452761 33.566 143 58 5 93 204 278 414 4.70e-12 64.3
Msa0203590 MtrunA17_Chr1g0161711 28.906 128 59 1 108 203 722 849 4.70e-12 64.7
Msa0203590 MtrunA17_Chr2g0333691 32.773 119 49 3 116 203 273 391 4.97e-12 64.3
Msa0203590 MtrunA17_Chr2g0289161 32.456 114 46 2 126 208 587 700 5.07e-12 64.3
Msa0203590 MtrunA17_Chr1g0165261 31.724 145 90 4 66 205 423 563 5.14e-12 64.3
Msa0203590 MtrunA17_Chr1g0213501 30.719 153 69 5 89 211 253 398 5.16e-12 64.3
Msa0203590 MtrunA17_Chr7g0248491 31.193 109 45 2 126 204 325 433 5.19e-12 64.3
Msa0203590 MtrunA17_Chr8g0357691 33.884 121 47 3 113 203 633 750 5.47e-12 64.3
Msa0203590 MtrunA17_Chr6g0484231 46.875 64 28 1 99 162 192 249 6.69e-12 63.9
Msa0203590 MtrunA17_Chr1g0204461 29.710 138 64 3 99 210 818 948 7.15e-12 63.9
Msa0203590 MtrunA17_Chr4g0047561 32.353 136 56 4 99 205 191 319 7.34e-12 63.5
Msa0203590 MtrunA17_Chr5g0442151 33.043 115 46 3 126 209 848 962 8.83e-12 63.9
Msa0203590 MtrunA17_Chr1g0165231 31.724 145 90 4 66 205 984 1124 9.06e-12 63.9
Msa0203590 MtrunA17_Chr1g0165301 31.724 145 90 4 66 205 984 1124 9.06e-12 63.9
Msa0203590 MtrunA17_Chr2g0330471 30.986 142 68 4 96 207 540 681 9.08e-12 63.5
Msa0203590 MtrunA17_Chr7g0259211 38.272 81 47 1 108 188 434 511 9.14e-12 63.5
Msa0203590 MtrunA17_Chr5g0416311 33.898 118 41 2 126 209 248 362 9.67e-12 63.2
Msa0203590 MtrunA17_Chr1g0159611 46.774 62 33 0 108 169 388 449 9.68e-12 63.5
Msa0203590 MtrunA17_Chr3g0084411 32.110 109 44 3 126 204 664 772 1.11e-11 63.5
Msa0203590 MtrunA17_Chr1g0196391 40.260 77 43 1 108 184 445 518 1.14e-11 63.5
Msa0203590 MtrunA17_Chr5g0402071 28.947 114 51 2 126 209 331 444 1.18e-11 63.2
Msa0203590 MtrunA17_Chr1g0206401 43.939 66 34 1 118 183 507 569 1.22e-11 63.2
Msa0203590 MtrunA17_Chr7g0248881 50.980 51 25 0 121 171 513 563 1.23e-11 63.2
Msa0203590 MtrunA17_Chr2g0328171 35.652 115 43 2 126 209 248 362 1.34e-11 62.8
Msa0203590 MtrunA17_Chr5g0400681 38.532 109 57 5 93 199 830 930 1.36e-11 63.2
Msa0203590 MtrunA17_Chr3g0137191 27.500 120 56 1 115 203 216 335 1.38e-11 62.8
Msa0203590 MtrunA17_Chr4g0048661 32.308 130 56 3 115 212 191 320 1.48e-11 62.8
Msa0203590 MtrunA17_Chr4g0058761 31.405 121 78 2 89 208 905 1021 1.50e-11 63.2
Msa0203590 MtrunA17_Chr1g0206361 28.000 150 65 4 99 211 487 630 1.57e-11 62.8
Msa0203590 MtrunA17_Chr4g0048791 31.538 130 57 3 115 212 686 815 1.67e-11 62.8
Msa0203590 MtrunA17_Chr5g0413511 29.060 117 49 2 126 208 221 337 1.78e-11 62.4
Msa0203590 MtrunA17_Chr4g0069251 35.088 114 44 2 126 209 343 456 1.84e-11 62.8
Msa0203590 MtrunA17_Chr3g0084631 32.110 109 44 3 126 204 28 136 1.94e-11 60.5
Msa0203590 MtrunA17_Chr3g0098391 50.000 64 26 2 99 162 44 101 2.15e-11 61.6
Msa0203590 MtrunA17_Chr4g0048741 30.769 130 58 3 115 212 686 815 2.28e-11 62.4
Msa0203590 MtrunA17_Chr2g0302631 34.211 114 45 2 126 209 348 461 2.59e-11 62.4
Msa0203590 MtrunA17_Chr7g0237401 50.000 58 26 1 126 183 259 313 2.77e-11 62.0
Msa0203590 MtrunA17_Chr1g0181341 36.449 107 39 3 126 203 212 318 2.87e-11 62.0
Msa0203590 MtrunA17_Chr1g0191091 64.865 37 13 0 126 162 28 64 3.09e-11 57.4
Msa0203590 MtrunA17_Chr8g0389251 37.615 109 38 5 126 204 567 675 3.23e-11 62.0
Msa0203590 MtrunA17_Chr3g0119041 29.565 115 51 2 115 199 494 608 3.41e-11 62.0
Msa0203590 MtrunA17_Chr5g0434141 30.189 159 69 6 82 208 725 873 3.42e-11 62.0
Msa0203590 MtrunA17_Chr5g0429431 38.372 86 52 1 111 196 279 363 3.87e-11 61.6
Msa0203590 MtrunA17_Chr1g0165901 33.099 142 78 5 66 198 1069 1202 4.13e-11 62.0
Msa0203590 MtrunA17_Chr1g0181821 53.704 54 22 1 126 179 240 290 4.22e-11 61.2
Msa0203590 MtrunA17_Chr7g0263521 53.704 54 22 1 126 179 239 289 4.61e-11 61.2
Msa0203590 MtrunA17_Chr3g0096351 32.456 114 47 2 126 209 345 458 4.91e-11 61.2
Msa0203590 MtrunA17_Chr4g0066761 46.032 63 31 1 126 188 237 296 5.38e-11 61.2
Msa0203590 MtrunA17_Chr7g0236231 50.000 64 26 3 99 162 662 719 5.94e-11 61.2
Msa0203590 MtrunA17_Chr1g0165951 37.500 80 50 0 126 205 892 971 6.67e-11 61.2
Msa0203590 MtrunA17_Chr7g0232611 38.739 111 51 5 66 167 26 128 6.96e-11 58.9
Msa0203590 MtrunA17_Chr2g0277081 33.333 111 45 3 125 206 851 961 6.99e-11 61.2
Msa0203590 MtrunA17_Chr8g0344141 33.333 111 43 3 126 205 248 358 7.54e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203590 AT1G52310.2 62.992 127 15 1 115 209 345 471 1.53e-45 157
Msa0203590 AT1G52310.1 62.992 127 15 1 115 209 422 548 2.97e-45 158
Msa0203590 AT5G62710.2 34.127 126 53 2 115 211 432 556 4.93e-15 73.6
Msa0203590 AT3G53590.1 32.624 141 69 4 92 208 757 895 5.01e-15 73.6
Msa0203590 AT5G62710.1 34.127 126 53 2 115 211 466 590 5.42e-15 73.6
Msa0203590 AT3G24550.1 34.513 113 40 2 126 204 442 554 7.18e-14 70.1
Msa0203590 AT5G49760.1 33.108 148 62 5 91 208 766 906 9.33e-14 70.1
Msa0203590 AT1G31420.2 41.237 97 44 3 99 195 447 530 1.02e-13 69.7
Msa0203590 AT1G31420.1 41.237 97 44 3 99 195 448 531 1.07e-13 69.7
Msa0203590 AT1G31420.3 41.237 97 44 3 99 195 448 531 1.07e-13 69.7
Msa0203590 AT5G01020.1 37.273 110 38 2 126 204 238 347 1.30e-13 69.3
Msa0203590 AT1G09970.1 31.111 135 59 5 99 204 823 952 1.45e-13 69.3
Msa0203590 AT3G24540.1 33.051 118 45 2 126 209 345 462 2.00e-13 68.9
Msa0203590 AT5G57670.2 29.630 135 68 2 96 203 400 534 2.01e-13 68.9
Msa0203590 AT1G26150.1 29.060 117 49 2 126 208 592 708 2.10e-13 68.9
Msa0203590 AT2G02800.1 36.667 120 37 3 126 209 255 371 2.35e-13 68.6
Msa0203590 AT2G02800.2 36.667 120 37 3 126 209 255 371 2.35e-13 68.6
Msa0203590 AT1G16670.1 34.815 135 51 4 99 203 187 314 2.40e-13 68.6
Msa0203590 AT4G23270.3 33.333 144 58 6 91 203 462 598 3.30e-13 68.2
Msa0203590 AT4G23270.2 33.333 144 58 6 91 203 462 598 3.32e-13 68.2
Msa0203590 AT4G23270.1 33.333 144 58 6 91 203 462 598 3.32e-13 68.2
Msa0203590 AT4G20270.1 35.652 115 44 3 125 209 875 989 3.54e-13 68.2
Msa0203590 AT1G35710.1 36.842 95 36 1 126 196 1018 1112 3.92e-13 68.2
Msa0203590 AT5G49660.1 31.690 142 58 5 93 203 800 933 4.10e-13 68.2
Msa0203590 AT4G22130.1 30.303 132 61 3 108 208 543 674 5.11e-13 67.8
Msa0203590 AT1G61860.1 33.775 151 62 6 90 209 222 365 5.30e-13 67.4
Msa0203590 AT5G44700.1 41.250 80 43 1 99 178 1097 1172 5.49e-13 67.8
Msa0203590 AT4G23280.3 34.483 145 57 6 90 203 429 566 6.02e-13 67.4
Msa0203590 AT1G11303.1 33.594 128 56 3 99 203 652 773 6.26e-13 67.4
Msa0203590 AT4G23280.2 34.483 145 57 6 90 203 477 614 6.38e-13 67.4
Msa0203590 AT4G22130.2 30.303 132 61 3 108 208 402 533 6.43e-13 67.4
Msa0203590 AT4G23280.1 34.483 145 57 6 90 203 479 616 6.69e-13 67.4
Msa0203590 AT4G28490.1 35.172 145 62 5 90 207 829 968 7.13e-13 67.4
Msa0203590 AT1G75820.1 30.968 155 63 7 90 210 827 971 7.32e-13 67.4
Msa0203590 AT2G35620.3 29.577 142 64 3 98 210 444 578 9.09e-13 67.0
Msa0203590 AT2G35620.1 29.577 142 64 3 98 210 444 578 9.09e-13 67.0
Msa0203590 AT2G35620.2 29.577 142 64 3 98 210 444 578 9.09e-13 67.0
Msa0203590 AT2G35620.4 29.577 142 64 3 98 210 444 578 9.09e-13 67.0
Msa0203590 AT1G70530.1 32.192 146 65 4 99 210 459 604 9.97e-13 67.0
Msa0203590 AT5G49770.1 33.566 143 58 6 92 204 770 905 1.08e-12 67.0
Msa0203590 AT1G10620.1 33.036 112 41 2 126 203 532 643 1.36e-12 66.6
Msa0203590 AT4G23130.1 33.103 145 59 6 90 203 475 612 1.65e-12 66.2
Msa0203590 AT4G23130.2 33.103 145 59 6 90 203 479 616 1.67e-12 66.2
Msa0203590 AT5G56460.1 33.636 110 42 2 126 204 248 357 1.80e-12 65.9
Msa0203590 AT2G05940.1 30.952 168 76 4 75 206 204 367 1.86e-12 65.9
Msa0203590 AT1G11300.1 32.031 128 58 4 99 203 652 773 1.99e-12 66.2
Msa0203590 AT2G39660.1 36.607 112 40 3 126 206 241 352 2.00e-12 65.9
Msa0203590 AT3G13690.2 29.870 154 60 5 81 204 547 682 2.03e-12 65.9
Msa0203590 AT3G13690.1 29.870 154 60 5 81 204 547 682 2.03e-12 65.9
Msa0203590 AT3G13690.3 29.870 154 60 5 81 204 547 682 2.03e-12 65.9
Msa0203590 AT1G55200.3 33.094 139 63 6 96 204 512 650 2.41e-12 65.9
Msa0203590 AT1G55200.4 33.094 139 63 6 96 204 512 650 2.41e-12 65.9
Msa0203590 AT1G55200.1 33.094 139 63 6 96 204 512 650 2.41e-12 65.9
Msa0203590 AT1G55200.2 33.094 139 63 6 96 204 512 650 2.41e-12 65.9
Msa0203590 AT5G54590.3 34.615 104 42 2 126 203 273 376 2.50e-12 65.5
Msa0203590 AT5G54590.4 34.615 104 42 2 126 203 273 376 2.50e-12 65.5
Msa0203590 AT5G54590.2 34.615 104 42 2 126 203 273 376 2.50e-12 65.5
Msa0203590 AT3G28690.2 36.364 110 39 2 126 204 298 407 2.57e-12 65.5
Msa0203590 AT3G28690.3 36.364 110 39 2 126 204 247 356 2.85e-12 65.5
Msa0203590 AT4G23140.1 31.250 144 62 5 90 203 486 622 3.13e-12 65.5
Msa0203590 AT3G28690.1 36.364 110 39 2 126 204 198 307 3.27e-12 65.1
Msa0203590 AT4G00960.2 31.148 122 51 3 121 209 123 244 3.53e-12 64.3
Msa0203590 AT4G23150.1 32.143 140 58 5 90 199 471 603 3.77e-12 65.1
Msa0203590 AT4G00960.3 31.148 122 51 3 121 209 130 251 4.34e-12 64.3
Msa0203590 AT4G23160.1 31.250 144 62 5 90 203 494 630 4.68e-12 65.1
Msa0203590 AT3G07070.1 35.780 109 39 2 126 203 245 353 4.73e-12 64.7
Msa0203590 AT4G23180.1 33.333 144 59 6 90 203 483 619 4.74e-12 65.1
Msa0203590 AT4G21230.1 31.356 118 49 3 115 203 489 603 4.87e-12 64.7
Msa0203590 AT1G53440.1 37.692 130 48 6 113 210 819 947 5.22e-12 64.7
Msa0203590 AT1G09970.2 30.882 136 59 6 99 204 823 953 5.22e-12 64.7
Msa0203590 AT4G00960.1 31.148 122 51 3 121 209 217 338 5.26e-12 64.3
Msa0203590 AT5G07280.1 31.333 150 61 6 87 205 1053 1191 5.58e-12 64.7
Msa0203590 AT5G24080.2 36.607 112 41 2 123 204 691 802 5.68e-12 64.7
Msa0203590 AT1G66150.1 28.750 160 71 6 82 208 721 870 5.92e-12 64.7
Msa0203590 AT5G24080.3 35.246 122 45 3 123 210 564 685 5.93e-12 64.7
Msa0203590 AT5G24080.1 35.246 122 45 3 123 210 564 685 5.93e-12 64.7
Msa0203590 AT2G30730.2 32.432 111 45 2 126 206 228 338 7.13e-12 63.9
Msa0203590 AT3G18810.1 43.548 62 35 0 126 187 499 560 7.33e-12 64.3
Msa0203590 AT1G11410.1 30.769 143 63 5 90 203 658 793 7.42e-12 64.3
Msa0203590 AT1G11410.4 30.769 143 63 5 90 203 665 800 7.50e-12 64.3
Msa0203590 AT1G11410.3 30.769 143 63 5 90 203 634 769 7.52e-12 64.3
Msa0203590 AT5G63930.2 38.272 81 41 2 89 168 876 948 8.61e-12 64.3
Msa0203590 AT1G11410.2 30.769 143 63 5 90 203 543 678 8.86e-12 64.3
Msa0203590 AT5G63930.1 38.272 81 41 2 89 168 940 1012 9.28e-12 64.3
Msa0203590 AT2G26290.1 27.879 165 87 4 76 208 206 370 1.01e-11 63.5
Msa0203590 AT1G67720.1 31.707 123 53 2 112 204 756 877 1.04e-11 63.9
Msa0203590 AT2G30730.1 32.432 111 45 2 126 206 218 328 1.06e-11 63.5
Msa0203590 AT4G01330.1 30.275 109 46 2 126 204 326 434 1.09e-11 63.5
Msa0203590 AT1G72540.1 32.540 126 52 3 110 204 239 362 1.12e-11 63.5
Msa0203590 AT4G01330.2 30.275 109 46 2 126 204 326 434 1.13e-11 63.5
Msa0203590 AT4G01330.3 30.275 109 46 2 126 204 326 434 1.15e-11 63.5
Msa0203590 AT1G11300.2 32.031 128 58 4 99 203 637 758 1.18e-11 63.9
Msa0203590 AT1G72180.1 50.000 66 29 2 125 190 849 910 1.65e-11 63.5
Msa0203590 AT4G23130.3 47.945 73 31 4 90 162 479 544 1.73e-11 63.2
Msa0203590 AT5G02800.1 41.176 85 43 2 126 210 239 316 1.74e-11 62.8
Msa0203590 AT1G07870.1 31.944 144 58 5 96 203 238 377 1.97e-11 62.8
Msa0203590 AT5G16900.4 36.111 108 41 2 126 205 551 658 1.98e-11 63.2
Msa0203590 AT3G59110.1 35.088 114 44 3 126 209 354 467 2.06e-11 62.8
Msa0203590 AT1G78530.1 32.258 124 51 4 113 204 223 345 2.12e-11 62.8
Msa0203590 AT1G70530.2 40.000 80 47 1 99 178 459 537 2.17e-11 62.8
Msa0203590 AT5G65700.1 41.975 81 42 4 126 203 859 937 2.30e-11 63.2
Msa0203590 AT5G65700.2 41.975 81 42 4 126 203 859 937 2.30e-11 63.2
Msa0203590 AT2G28930.3 56.140 57 22 1 126 182 246 299 2.33e-11 62.8
Msa0203590 AT1G26150.2 50.000 54 26 1 126 178 592 645 2.43e-11 62.8
Msa0203590 AT1G07870.2 31.944 144 58 5 96 203 238 377 2.46e-11 62.8
Msa0203590 AT2G28930.2 56.140 57 22 1 126 182 243 296 2.50e-11 62.4
Msa0203590 AT4G08850.1 31.532 111 68 2 93 203 917 1019 2.55e-11 62.8
Msa0203590 AT1G01540.2 33.028 109 43 4 126 204 318 426 2.77e-11 62.4
Msa0203590 AT1G49730.4 42.857 84 37 2 126 209 492 564 2.79e-11 62.8
Msa0203590 AT5G16900.1 36.111 108 41 2 126 205 737 844 2.93e-11 62.8
Msa0203590 AT5G16900.3 36.111 108 41 2 126 205 737 844 2.93e-11 62.8
Msa0203590 AT5G01950.7 31.884 138 68 4 95 208 770 905 3.01e-11 62.8
Msa0203590 AT5G01950.2 31.884 138 68 4 95 208 680 815 3.07e-11 62.8
Msa0203590 AT5G01950.3 31.884 138 68 4 95 208 765 900 3.12e-11 62.8
Msa0203590 AT5G01950.1 31.884 138 68 4 95 208 765 900 3.12e-11 62.8
Msa0203590 AT5G01950.4 31.884 138 68 4 95 208 765 900 3.12e-11 62.8
Msa0203590 AT5G01950.8 31.884 138 68 4 95 208 765 900 3.12e-11 62.8
Msa0203590 AT2G28930.1 56.140 57 22 1 126 182 254 307 3.37e-11 62.0
Msa0203590 AT1G78530.2 54.902 51 22 1 113 163 223 272 3.49e-11 61.6
Msa0203590 AT1G07570.4 36.842 114 35 3 126 205 126 236 3.55e-11 61.6
Msa0203590 AT1G61610.2 60.000 45 18 0 118 162 681 725 3.70e-11 62.4
Msa0203590 AT4G23230.1 29.861 144 64 5 90 203 472 608 3.71e-11 62.4
Msa0203590 AT3G14840.2 35.246 122 48 3 113 204 824 944 3.74e-11 62.4
Msa0203590 AT2G18470.1 28.571 112 47 1 126 204 446 557 3.76e-11 62.4
Msa0203590 AT2G18470.3 28.571 112 47 1 126 204 446 557 3.76e-11 62.4
Msa0203590 AT2G18470.2 28.571 112 47 1 126 204 446 557 3.76e-11 62.4
Msa0203590 AT1G61610.1 60.000 45 18 0 118 162 681 725 3.79e-11 62.4
Msa0203590 AT4G00330.1 45.205 73 36 2 93 165 259 327 4.00e-11 62.0
Msa0203590 AT4G00330.2 45.205 73 36 2 93 165 259 327 4.00e-11 62.0
Msa0203590 AT4G05200.2 27.703 148 70 6 90 207 500 640 5.01e-11 62.0
Msa0203590 AT2G18470.4 47.170 53 28 0 126 178 446 498 5.02e-11 61.6
Msa0203590 AT1G49270.1 45.161 62 31 1 126 187 499 557 5.11e-11 62.0
Msa0203590 AT1G29740.2 33.333 114 45 2 121 203 834 947 5.14e-11 62.0
Msa0203590 AT2G48010.1 32.576 132 57 3 108 207 432 563 5.39e-11 61.6
Msa0203590 AT4G05200.1 27.703 148 70 6 90 207 482 622 5.42e-11 61.6
Msa0203590 AT3G45920.1 33.333 108 44 2 126 205 45 152 5.58e-11 59.7
Msa0203590 AT1G29740.1 33.333 114 45 2 121 203 834 947 5.65e-11 62.0
Msa0203590 AT4G21390.1 32.609 138 58 4 99 207 672 803 6.08e-11 61.6
Msa0203590 AT4G21390.2 45.000 80 38 2 99 178 672 745 6.18e-11 61.6
Msa0203590 AT1G06700.1 32.203 118 48 3 117 204 232 347 6.45e-11 61.2
Msa0203590 AT1G06700.3 32.203 118 48 3 117 204 232 347 6.45e-11 61.2
Msa0203590 AT1G06700.2 32.203 118 48 3 117 204 232 347 6.45e-11 61.2
Msa0203590 AT5G63940.1 26.966 178 98 5 58 204 458 634 7.06e-11 61.6
Msa0203590 AT2G42960.3 35.088 114 44 3 126 209 347 460 7.11e-11 61.2
Msa0203590 AT2G42960.5 35.088 114 44 3 126 209 347 460 7.11e-11 61.2
Msa0203590 AT2G42960.4 35.088 114 44 3 126 209 347 460 7.11e-11 61.2
Msa0203590 AT2G42960.1 35.088 114 44 3 126 209 347 460 7.11e-11 61.2
Msa0203590 AT4G32000.3 35.294 119 46 2 116 203 324 442 7.68e-11 61.2
Msa0203590 AT4G32000.2 37.615 109 37 2 126 203 292 400 7.84e-11 61.2
Msa0203590 AT4G32000.1 37.615 109 37 2 126 203 291 399 7.90e-11 61.2
Msa0203590 AT1G61590.1 33.588 131 55 4 108 206 249 379 8.04e-11 61.2
Msa0203590 AT3G62220.1 32.203 118 48 3 117 204 231 346 8.25e-11 60.8
Msa0203590 AT3G62220.3 32.203 118 48 3 117 204 231 346 8.25e-11 60.8

Find 47 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGTGACGTTTATAGTTT+TGG 0.282002 2_1:-27547084 Msa0203590:CDS
GTAGTGTTCTGCATTGTTCT+TGG 0.310851 2_1:+27547469 None:intergenic
TGAACAACGTGTGACATTCT+AGG 0.318462 2_1:+27546765 None:intergenic
CTACTACTGACCCGTCGTTT+TGG 0.345939 2_1:-27547569 Msa0203590:CDS
GGTTCAGTACTGTTAATTCC+TGG 0.360423 2_1:+27547302 None:intergenic
GACATTCTAGGGCGCATAGA+AGG 0.377991 2_1:+27546777 None:intergenic
AGACGAGGTCAACCACCTTC+TGG 0.419249 2_1:+27546820 None:intergenic
CGACGGGTCAGTAGTAGAAT+TGG 0.419393 2_1:+27547575 None:intergenic
TTAATGTTAATGCCATCAAT+CGG 0.422601 2_1:+27547612 None:intergenic
ATTCCTGGAATGACTTTAGC+AGG 0.435535 2_1:+27547317 None:intergenic
TGTCAGACTTGTTGTAGAAC+TGG 0.435571 2_1:+27547399 None:intergenic
GAAAATGGAAACCCGATTGA+TGG 0.454629 2_1:-27547624 None:intergenic
CTACTACTCGAAATAGTTAG+TGG 0.456858 2_1:-27547057 Msa0203590:CDS
AAACCTGCTAAAGTCATTCC+AGG 0.460996 2_1:-27547320 Msa0203590:CDS
AATAGTTAGTGGACGTAGAC+CGG 0.466045 2_1:-27547046 Msa0203590:CDS
TGTTCTGCATTGTTCTTGGA+TGG 0.478788 2_1:+27547473 None:intergenic
CATGAGAGGACTGTGATGGC+AGG 0.482521 2_1:-27547162 Msa0203590:CDS
GTCTGAAAAGTCACCAGCTA+CGG 0.483161 2_1:+27547370 None:intergenic
ATTGTTCTTGGATGGAGACT+TGG 0.490905 2_1:+27547481 None:intergenic
TCTGAAAAGTCACCAGCTAC+GGG 0.497741 2_1:+27547371 None:intergenic
TAATGTTAATGCCATCAATC+GGG 0.498030 2_1:+27547613 None:intergenic
CACCACCTTGATACGCAGAT+TGG 0.501552 2_1:+27547505 None:intergenic
GAACAACGTGTGACATTCTA+GGG 0.509502 2_1:+27546766 None:intergenic
TGATACCAATCTGCGTATCA+AGG 0.509617 2_1:-27547510 Msa0203590:CDS
TGTTATTTGCAATATACAAA+TGG 0.516952 2_1:+27547444 None:intergenic
TATGCAATTGCCAAAACGAC+GGG 0.530635 2_1:+27547559 None:intergenic
TCTGACAGTGACCCCGTAGC+TGG 0.532107 2_1:-27547383 Msa0203590:CDS
CACTAACTATTTCGAGTAGT+AGG 0.534554 2_1:+27547058 None:intergenic
CTTGTGCAACCTTCTTATAG+AGG 0.548451 2_1:+27547348 None:intergenic
ACATTCTAGGGCGCATAGAA+GGG 0.566800 2_1:+27546778 None:intergenic
TCGTTTCTGTACACAAACTC+TGG 0.576390 2_1:+27547117 None:intergenic
ACAGAATCAACTGCTTGTGC+CGG 0.584936 2_1:+27547027 None:intergenic
ATGAGAGGACTGTGATGGCA+GGG 0.589701 2_1:-27547161 Msa0203590:CDS
CATATGAAGCGATGCATGAG+AGG 0.590509 2_1:-27547176 Msa0203590:intron
GGCACAAGCAGTTGATTCTG+TGG 0.591401 2_1:-27547025 Msa0203590:CDS
TGAGAGGACTGTGATGGCAG+GGG 0.596780 2_1:-27547160 Msa0203590:CDS
CTATGCAATTGCCAAAACGA+CGG 0.601451 2_1:+27547558 None:intergenic
GCACAAGCAGTTGATTCTGT+GGG 0.615903 2_1:-27547024 Msa0203590:intron
TATTTGCAATATACAAATGG+AGG 0.622419 2_1:+27547447 None:intergenic
GAGAGGACTGTGATGGCAGG+GGG 0.623889 2_1:-27547159 Msa0203590:CDS
CACTAGTATGATCCAGAAGG+TGG 0.646039 2_1:-27546832 Msa0203590:CDS
AGACACTAGTATGATCCAGA+AGG 0.673194 2_1:-27546835 Msa0203590:CDS
ATTAACAGTACTGAACCTGA+AGG 0.683627 2_1:-27547296 Msa0203590:intron
GATGCATGAGAGGACTGTGA+TGG 0.695690 2_1:-27547166 Msa0203590:CDS
CTGAAAAGTCACCAGCTACG+GGG 0.718542 2_1:+27547372 None:intergenic
GCTGCATGCATGAATAGACG+AGG 0.738375 2_1:+27546805 None:intergenic
TACCAATCTGCGTATCAAGG+TGG 0.740548 2_1:-27547507 Msa0203590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCCTTATATATATTTGAAT+GGG - chr2_1:27547412-27547431 Msa0203590:CDS 15.0%
!! ATCCTTATATATATTTGAAT+GGG - chr2_1:27547412-27547431 Msa0203590:CDS 15.0%
!!! TGTTATTTGCAATATACAAA+TGG + chr2_1:27546907-27546926 None:intergenic 20.0%
!! GATCCTTATATATATTTGAA+TGG - chr2_1:27547411-27547430 Msa0203590:CDS 20.0%
!!! TGTTATTTGCAATATACAAA+TGG + chr2_1:27546907-27546926 None:intergenic 20.0%
!! GATCCTTATATATATTTGAA+TGG - chr2_1:27547411-27547430 Msa0203590:CDS 20.0%
! TTAATGTTAATGCCATCAAT+CGG + chr2_1:27546739-27546758 None:intergenic 25.0%
! TATTTGCAATATACAAATGG+AGG + chr2_1:27546904-27546923 None:intergenic 25.0%
! AGCCCATTCAAATATATATA+AGG + chr2_1:27547417-27547436 None:intergenic 25.0%
! AGTAGATGAGGATATATATA+AGG + chr2_1:27547482-27547501 None:intergenic 25.0%
! TTAATGTTAATGCCATCAAT+CGG + chr2_1:27546739-27546758 None:intergenic 25.0%
! TATTTGCAATATACAAATGG+AGG + chr2_1:27546904-27546923 None:intergenic 25.0%
! AGCCCATTCAAATATATATA+AGG + chr2_1:27547417-27547436 None:intergenic 25.0%
! AGTAGATGAGGATATATATA+AGG + chr2_1:27547482-27547501 None:intergenic 25.0%
TAATGTTAATGCCATCAATC+GGG + chr2_1:27546738-27546757 None:intergenic 30.0%
! AAGAGTGACGTTTATAGTTT+TGG - chr2_1:27547264-27547283 Msa0203590:intron 30.0%
TTGGCAGAGTATATTTGAAT+GGG - chr2_1:27547347-27547366 Msa0203590:CDS 30.0%
TAATGTTAATGCCATCAATC+GGG + chr2_1:27546738-27546757 None:intergenic 30.0%
! AAGAGTGACGTTTATAGTTT+TGG - chr2_1:27547264-27547283 Msa0203590:intron 30.0%
TTGGCAGAGTATATTTGAAT+GGG - chr2_1:27547347-27547366 Msa0203590:CDS 30.0%
! CTTTTCAGACCTCTATAAGA+AGG - chr2_1:27546991-27547010 Msa0203590:intron 35.0%
! ATTAACAGTACTGAACCTGA+AGG - chr2_1:27547052-27547071 Msa0203590:CDS 35.0%
! AGCAGCACAAATTTTGCTTT+GGG + chr2_1:27547099-27547118 None:intergenic 35.0%
! CACTAACTATTTCGAGTAGT+AGG + chr2_1:27547293-27547312 None:intergenic 35.0%
CTACTACTCGAAATAGTTAG+TGG - chr2_1:27547291-27547310 Msa0203590:intron 35.0%
GTTGGCAGAGTATATTTGAA+TGG - chr2_1:27547346-27547365 Msa0203590:CDS 35.0%
TATATAAGGATCCAAGAGCT+CGG + chr2_1:27547403-27547422 None:intergenic 35.0%
TATATAAGGATCCAAGAGCT+CGG + chr2_1:27547403-27547422 None:intergenic 35.0%
! CTTTTCAGACCTCTATAAGA+AGG - chr2_1:27546991-27547010 Msa0203590:intron 35.0%
! ATTAACAGTACTGAACCTGA+AGG - chr2_1:27547052-27547071 Msa0203590:CDS 35.0%
! AGCAGCACAAATTTTGCTTT+GGG + chr2_1:27547099-27547118 None:intergenic 35.0%
! CACTAACTATTTCGAGTAGT+AGG + chr2_1:27547293-27547312 None:intergenic 35.0%
CTACTACTCGAAATAGTTAG+TGG - chr2_1:27547291-27547310 Msa0203590:intron 35.0%
GTTGGCAGAGTATATTTGAA+TGG - chr2_1:27547346-27547365 Msa0203590:CDS 35.0%
TATATAAGGATCCAAGAGCT+CGG + chr2_1:27547403-27547422 None:intergenic 35.0%
TATATAAGGATCCAAGAGCT+CGG + chr2_1:27547403-27547422 None:intergenic 35.0%
TATGCAATTGCCAAAACGAC+GGG + chr2_1:27546792-27546811 None:intergenic 40.0%
CTATGCAATTGCCAAAACGA+CGG + chr2_1:27546793-27546812 None:intergenic 40.0%
!! GTCGTTTTGGCAATTGCATA+GGG - chr2_1:27546792-27546811 Msa0203590:CDS 40.0%
TGATACCAATCTGCGTATCA+AGG - chr2_1:27546838-27546857 Msa0203590:intron 40.0%
ATTGTTCTTGGATGGAGACT+TGG + chr2_1:27546870-27546889 None:intergenic 40.0%
TGTTCTGCATTGTTCTTGGA+TGG + chr2_1:27546878-27546897 None:intergenic 40.0%
GTAGTGTTCTGCATTGTTCT+TGG + chr2_1:27546882-27546901 None:intergenic 40.0%
!! TGTCAGACTTGTTGTAGAAC+TGG + chr2_1:27546952-27546971 None:intergenic 40.0%
CTTGTGCAACCTTCTTATAG+AGG + chr2_1:27547003-27547022 None:intergenic 40.0%
AAACCTGCTAAAGTCATTCC+AGG - chr2_1:27547028-27547047 Msa0203590:CDS 40.0%
ATTCCTGGAATGACTTTAGC+AGG + chr2_1:27547034-27547053 None:intergenic 40.0%
GGTTCAGTACTGTTAATTCC+TGG + chr2_1:27547049-27547068 None:intergenic 40.0%
! CAGCAGCACAAATTTTGCTT+TGG + chr2_1:27547100-27547119 None:intergenic 40.0%
CAAAGCAAAATTTGTGCTGC+TGG - chr2_1:27547098-27547117 Msa0203590:CDS 40.0%
TCGTTTCTGTACACAAACTC+TGG + chr2_1:27547234-27547253 None:intergenic 40.0%
! AATAGTTAGTGGACGTAGAC+CGG - chr2_1:27547302-27547321 Msa0203590:CDS 40.0%
ATATAAGGATCCAAGAGCTC+GGG + chr2_1:27547402-27547421 None:intergenic 40.0%
ATATAAGGATCCAAGAGCTC+GGG + chr2_1:27547402-27547421 None:intergenic 40.0%
TCTGGATCATACTAGTGTCT+GGG + chr2_1:27547513-27547532 None:intergenic 40.0%
TTCTGGATCATACTAGTGTC+TGG + chr2_1:27547514-27547533 None:intergenic 40.0%
AGACACTAGTATGATCCAGA+AGG - chr2_1:27547513-27547532 Msa0203590:CDS 40.0%
GAACAACGTGTGACATTCTA+GGG + chr2_1:27547585-27547604 None:intergenic 40.0%
TGAACAACGTGTGACATTCT+AGG + chr2_1:27547586-27547605 None:intergenic 40.0%
TATGCAATTGCCAAAACGAC+GGG + chr2_1:27546792-27546811 None:intergenic 40.0%
CTATGCAATTGCCAAAACGA+CGG + chr2_1:27546793-27546812 None:intergenic 40.0%
!! GTCGTTTTGGCAATTGCATA+GGG - chr2_1:27546792-27546811 Msa0203590:CDS 40.0%
TGATACCAATCTGCGTATCA+AGG - chr2_1:27546838-27546857 Msa0203590:intron 40.0%
ATTGTTCTTGGATGGAGACT+TGG + chr2_1:27546870-27546889 None:intergenic 40.0%
TGTTCTGCATTGTTCTTGGA+TGG + chr2_1:27546878-27546897 None:intergenic 40.0%
GTAGTGTTCTGCATTGTTCT+TGG + chr2_1:27546882-27546901 None:intergenic 40.0%
!! TGTCAGACTTGTTGTAGAAC+TGG + chr2_1:27546952-27546971 None:intergenic 40.0%
CTTGTGCAACCTTCTTATAG+AGG + chr2_1:27547003-27547022 None:intergenic 40.0%
AAACCTGCTAAAGTCATTCC+AGG - chr2_1:27547028-27547047 Msa0203590:CDS 40.0%
ATTCCTGGAATGACTTTAGC+AGG + chr2_1:27547034-27547053 None:intergenic 40.0%
GGTTCAGTACTGTTAATTCC+TGG + chr2_1:27547049-27547068 None:intergenic 40.0%
! CAGCAGCACAAATTTTGCTT+TGG + chr2_1:27547100-27547119 None:intergenic 40.0%
CAAAGCAAAATTTGTGCTGC+TGG - chr2_1:27547098-27547117 Msa0203590:CDS 40.0%
TCGTTTCTGTACACAAACTC+TGG + chr2_1:27547234-27547253 None:intergenic 40.0%
! AATAGTTAGTGGACGTAGAC+CGG - chr2_1:27547302-27547321 Msa0203590:CDS 40.0%
ATATAAGGATCCAAGAGCTC+GGG + chr2_1:27547402-27547421 None:intergenic 40.0%
ATATAAGGATCCAAGAGCTC+GGG + chr2_1:27547402-27547421 None:intergenic 40.0%
TCTGGATCATACTAGTGTCT+GGG + chr2_1:27547513-27547532 None:intergenic 40.0%
TTCTGGATCATACTAGTGTC+TGG + chr2_1:27547514-27547533 None:intergenic 40.0%
AGACACTAGTATGATCCAGA+AGG - chr2_1:27547513-27547532 Msa0203590:CDS 40.0%
GAACAACGTGTGACATTCTA+GGG + chr2_1:27547585-27547604 None:intergenic 40.0%
TGAACAACGTGTGACATTCT+AGG + chr2_1:27547586-27547605 None:intergenic 40.0%
!! CGTCGTTTTGGCAATTGCAT+AGG - chr2_1:27546791-27546810 Msa0203590:CDS 45.0%
TACCAATCTGCGTATCAAGG+TGG - chr2_1:27546841-27546860 Msa0203590:intron 45.0%
TCTGAAAAGTCACCAGCTAC+GGG + chr2_1:27546980-27546999 None:intergenic 45.0%
GTCTGAAAAGTCACCAGCTA+CGG + chr2_1:27546981-27547000 None:intergenic 45.0%
TTCTTCTCATCCTCACCTTC+AGG + chr2_1:27547070-27547089 None:intergenic 45.0%
! AAAATTTGTGCTGCTGGACG+AGG - chr2_1:27547104-27547123 Msa0203590:CDS 45.0%
CGCTTCATATGGCACAAACT+TGG + chr2_1:27547163-27547182 None:intergenic 45.0%
CTCTCATGCATCGCTTCATA+TGG + chr2_1:27547174-27547193 None:intergenic 45.0%
CATATGAAGCGATGCATGAG+AGG - chr2_1:27547172-27547191 Msa0203590:intron 45.0%
ACAGAATCAACTGCTTGTGC+CGG + chr2_1:27547324-27547343 None:intergenic 45.0%
! GCACAAGCAGTTGATTCTGT+GGG - chr2_1:27547324-27547343 Msa0203590:CDS 45.0%
! AAGCAGTTGATTCTGTGGGT+TGG - chr2_1:27547328-27547347 Msa0203590:CDS 45.0%
!! ATTTGAATGGGCTACACCTC+TGG - chr2_1:27547359-27547378 Msa0203590:CDS 45.0%
TATAAGGATCCAAGAGCTCG+GGG + chr2_1:27547401-27547420 None:intergenic 45.0%
TAGCGATGAGCTTGAACAAG+AGG + chr2_1:27547443-27547462 None:intergenic 45.0%
TATAAGGATCCAAGAGCTCG+GGG + chr2_1:27547401-27547420 None:intergenic 45.0%
TGGGACGATACTAGTAGATG+AGG + chr2_1:27547494-27547513 None:intergenic 45.0%
CACTAGTATGATCCAGAAGG+TGG - chr2_1:27547516-27547535 Msa0203590:CDS 45.0%
!! ACATTCTAGGGCGCATAGAA+GGG + chr2_1:27547573-27547592 None:intergenic 45.0%
!! CGTCGTTTTGGCAATTGCAT+AGG - chr2_1:27546791-27546810 Msa0203590:CDS 45.0%
TACCAATCTGCGTATCAAGG+TGG - chr2_1:27546841-27546860 Msa0203590:intron 45.0%
TCTGAAAAGTCACCAGCTAC+GGG + chr2_1:27546980-27546999 None:intergenic 45.0%
GTCTGAAAAGTCACCAGCTA+CGG + chr2_1:27546981-27547000 None:intergenic 45.0%
TTCTTCTCATCCTCACCTTC+AGG + chr2_1:27547070-27547089 None:intergenic 45.0%
! AAAATTTGTGCTGCTGGACG+AGG - chr2_1:27547104-27547123 Msa0203590:CDS 45.0%
CGCTTCATATGGCACAAACT+TGG + chr2_1:27547163-27547182 None:intergenic 45.0%
CTCTCATGCATCGCTTCATA+TGG + chr2_1:27547174-27547193 None:intergenic 45.0%
CATATGAAGCGATGCATGAG+AGG - chr2_1:27547172-27547191 Msa0203590:intron 45.0%
ACAGAATCAACTGCTTGTGC+CGG + chr2_1:27547324-27547343 None:intergenic 45.0%
! GCACAAGCAGTTGATTCTGT+GGG - chr2_1:27547324-27547343 Msa0203590:CDS 45.0%
! AAGCAGTTGATTCTGTGGGT+TGG - chr2_1:27547328-27547347 Msa0203590:CDS 45.0%
!! ATTTGAATGGGCTACACCTC+TGG - chr2_1:27547359-27547378 Msa0203590:CDS 45.0%
TATAAGGATCCAAGAGCTCG+GGG + chr2_1:27547401-27547420 None:intergenic 45.0%
TAGCGATGAGCTTGAACAAG+AGG + chr2_1:27547443-27547462 None:intergenic 45.0%
TATAAGGATCCAAGAGCTCG+GGG + chr2_1:27547401-27547420 None:intergenic 45.0%
TGGGACGATACTAGTAGATG+AGG + chr2_1:27547494-27547513 None:intergenic 45.0%
CACTAGTATGATCCAGAAGG+TGG - chr2_1:27547516-27547535 Msa0203590:CDS 45.0%
!! ACATTCTAGGGCGCATAGAA+GGG + chr2_1:27547573-27547592 None:intergenic 45.0%
CGACGGGTCAGTAGTAGAAT+TGG + chr2_1:27546776-27546795 None:intergenic 50.0%
! CTACTACTGACCCGTCGTTT+TGG - chr2_1:27546779-27546798 Msa0203590:CDS 50.0%
CACCACCTTGATACGCAGAT+TGG + chr2_1:27546846-27546865 None:intergenic 50.0%
CTGAAAAGTCACCAGCTACG+GGG + chr2_1:27546979-27546998 None:intergenic 50.0%
! CAGTACTGAACCTGAAGGTG+AGG - chr2_1:27547057-27547076 Msa0203590:CDS 50.0%
! GAGTTTGGAGCGCACCTTAT+GGG - chr2_1:27547126-27547145 Msa0203590:CDS 50.0%
GATGCATGAGAGGACTGTGA+TGG - chr2_1:27547182-27547201 Msa0203590:intron 50.0%
ATGAGAGGACTGTGATGGCA+GGG - chr2_1:27547187-27547206 Msa0203590:intron 50.0%
! GGCACAAGCAGTTGATTCTG+TGG - chr2_1:27547323-27547342 Msa0203590:CDS 50.0%
TAGCGATGAGCTTGAACCAG+AGG + chr2_1:27547378-27547397 None:intergenic 50.0%
GCTGCATGCATGAATAGACG+AGG + chr2_1:27547546-27547565 None:intergenic 50.0%
!! GACATTCTAGGGCGCATAGA+AGG + chr2_1:27547574-27547593 None:intergenic 50.0%
CGACGGGTCAGTAGTAGAAT+TGG + chr2_1:27546776-27546795 None:intergenic 50.0%
! CTACTACTGACCCGTCGTTT+TGG - chr2_1:27546779-27546798 Msa0203590:CDS 50.0%
CACCACCTTGATACGCAGAT+TGG + chr2_1:27546846-27546865 None:intergenic 50.0%
CTGAAAAGTCACCAGCTACG+GGG + chr2_1:27546979-27546998 None:intergenic 50.0%
! CAGTACTGAACCTGAAGGTG+AGG - chr2_1:27547057-27547076 Msa0203590:CDS 50.0%
! GAGTTTGGAGCGCACCTTAT+GGG - chr2_1:27547126-27547145 Msa0203590:CDS 50.0%
GATGCATGAGAGGACTGTGA+TGG - chr2_1:27547182-27547201 Msa0203590:intron 50.0%
ATGAGAGGACTGTGATGGCA+GGG - chr2_1:27547187-27547206 Msa0203590:intron 50.0%
! GGCACAAGCAGTTGATTCTG+TGG - chr2_1:27547323-27547342 Msa0203590:CDS 50.0%
TAGCGATGAGCTTGAACCAG+AGG + chr2_1:27547378-27547397 None:intergenic 50.0%
GCTGCATGCATGAATAGACG+AGG + chr2_1:27547546-27547565 None:intergenic 50.0%
!! GACATTCTAGGGCGCATAGA+AGG + chr2_1:27547574-27547593 None:intergenic 50.0%
! GGAGTTTGGAGCGCACCTTA+TGG - chr2_1:27547125-27547144 Msa0203590:CDS 55.0%
! GCACCTTATGGGTGATGGCT+TGG - chr2_1:27547137-27547156 Msa0203590:CDS 55.0%
TGGCCAAGCCATCACCCATA+AGG + chr2_1:27547143-27547162 None:intergenic 55.0%
CATGAGAGGACTGTGATGGC+AGG - chr2_1:27547186-27547205 Msa0203590:intron 55.0%
TGAGAGGACTGTGATGGCAG+GGG - chr2_1:27547188-27547207 Msa0203590:intron 55.0%
GTGATGGCAGGGGGAACTTA+TGG - chr2_1:27547198-27547217 Msa0203590:intron 55.0%
AGACGAGGTCAACCACCTTC+TGG + chr2_1:27547531-27547550 None:intergenic 55.0%
! GGAGTTTGGAGCGCACCTTA+TGG - chr2_1:27547125-27547144 Msa0203590:CDS 55.0%
! GCACCTTATGGGTGATGGCT+TGG - chr2_1:27547137-27547156 Msa0203590:CDS 55.0%
TGGCCAAGCCATCACCCATA+AGG + chr2_1:27547143-27547162 None:intergenic 55.0%
CATGAGAGGACTGTGATGGC+AGG - chr2_1:27547186-27547205 Msa0203590:intron 55.0%
TGAGAGGACTGTGATGGCAG+GGG - chr2_1:27547188-27547207 Msa0203590:intron 55.0%
GTGATGGCAGGGGGAACTTA+TGG - chr2_1:27547198-27547217 Msa0203590:intron 55.0%
AGACGAGGTCAACCACCTTC+TGG + chr2_1:27547531-27547550 None:intergenic 55.0%
TCTGACAGTGACCCCGTAGC+TGG - chr2_1:27546965-27546984 Msa0203590:intron 60.0%
! GTGCTGCTGGACGAGGAGTT+TGG - chr2_1:27547111-27547130 Msa0203590:CDS 60.0%
GGAGCGCACCTTATGGGTGA+TGG - chr2_1:27547132-27547151 Msa0203590:CDS 60.0%
GAGAGGACTGTGATGGCAGG+GGG - chr2_1:27547189-27547208 Msa0203590:intron 60.0%
TCATCGCTACCCCGAGCTCT+TGG - chr2_1:27547389-27547408 Msa0203590:CDS 60.0%
TCATCGCTACCCCGAGCTCT+TGG - chr2_1:27547389-27547408 Msa0203590:CDS 60.0%
TCTGACAGTGACCCCGTAGC+TGG - chr2_1:27546965-27546984 Msa0203590:intron 60.0%
! GTGCTGCTGGACGAGGAGTT+TGG - chr2_1:27547111-27547130 Msa0203590:CDS 60.0%
GGAGCGCACCTTATGGGTGA+TGG - chr2_1:27547132-27547151 Msa0203590:CDS 60.0%
GAGAGGACTGTGATGGCAGG+GGG - chr2_1:27547189-27547208 Msa0203590:intron 60.0%
TCATCGCTACCCCGAGCTCT+TGG - chr2_1:27547389-27547408 Msa0203590:CDS 60.0%
TCATCGCTACCCCGAGCTCT+TGG - chr2_1:27547389-27547408 Msa0203590:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 27546728 27547642 27546728 ID=Msa0203590;Name=Msa0203590
chr2_1 mRNA 27546728 27547642 27546728 ID=Msa0203590-mRNA-1;Parent=Msa0203590;Name=Msa0203590-mRNA-1;_AED=0.24;_eAED=0.32;_QI=0|0|0|1|0.5|0.33|3|0|212
chr2_1 exon 27547297 27547642 27547297 ID=Msa0203590-mRNA-1:exon:10184;Parent=Msa0203590-mRNA-1
chr2_1 exon 27547025 27547189 27547025 ID=Msa0203590-mRNA-1:exon:10183;Parent=Msa0203590-mRNA-1
chr2_1 exon 27546728 27546855 27546728 ID=Msa0203590-mRNA-1:exon:10182;Parent=Msa0203590-mRNA-1
chr2_1 CDS 27547297 27547642 27547297 ID=Msa0203590-mRNA-1:cds;Parent=Msa0203590-mRNA-1
chr2_1 CDS 27547025 27547189 27547025 ID=Msa0203590-mRNA-1:cds;Parent=Msa0203590-mRNA-1
chr2_1 CDS 27546728 27546855 27546728 ID=Msa0203590-mRNA-1:cds;Parent=Msa0203590-mRNA-1
Gene Sequence

>Msa0203590

ATGGAAACCCGATTGATGGCATTAACATTAATTACGAGAACATCACCAATTCTACTACTGACCCGTCGTTTTGGCAATTGCATAGGGCAAGTTATAACAGCACTCAAAAATGATACCAATCTGCGTATCAAGGTGGTGTCCAAGTCTCCATCCAAGAACAATGCAGAACACTACCTCCATTTGTATATTGCAAATAACAGCATTATTGATCTTATTAACTACCAGTTCTACAACAAGTCTGACAGTGACCCCGTAGCTGGTGACTTTTCAGACCTCTATAAGAAGGTTGCACAAGACTACAAACCTGCTAAAGTCATTCCAGGAATTAACAGTACTGAACCTGAAGCGATGCATGAGAGGACTGTGATGGCAGGGGGAACTTATGGATATCTTGCTCCAGAGTTTGTGTACAGAAACGAGCTTACGACAAAGAGTGACGTTTATAGTTTTGGTGTCCTACTACTCGAAATAGTTAGTGGACGTAGACCGGCACAAGCAGTTGATTCTGTGGACACTAGTATGATCCAGAAGGTGGTTGACCTCGTCTATTCATGCATGCAGCATGTCCCTTCTATGCGCCCTAGAATGTCACACGTTGTTCATCAGCTGCAACAGTTTACCCAGCCACCTTCAAAATAA
Protein sequence

>Msa0203590

METRLMALTLITRTSPILLLTRRFGNCIGQVITALKNDTNLRIKVVSKSPSKNNAEHYLHLYIANNSIIDLINYQFYNKSDSDPVAGDFSDLYKKVAQDYKPAKVIPGINSTEPEAMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVDTSMIQKVVDLVYSCMQHVPSMRPRMSHVVHQLQQFTQPPSK*