AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0204270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0204270 MtrunA17_Chr1g0162721 62.733 322 78 9 265 559 1 307 5.33e-119 353
Msa0204270 MtrunA17_Chr1g0162721 60.959 292 65 7 15 259 1 290 1.16e-101 309
Msa0204270 MtrunA17_Chr2g0302481 66.154 195 40 2 65 259 3 171 6.77e-77 241
Msa0204270 MtrunA17_Chr2g0302481 56.000 225 60 2 335 559 3 188 3.23e-70 223
Msa0204270 MtrunA17_Chr2g0302501 84.746 118 18 0 5 122 10 127 9.46e-67 213
Msa0204270 MtrunA17_Chr2g0302501 53.901 141 43 4 254 392 7 127 2.42e-37 134
Msa0204270 MtrunA17_Chr4g0065261 60.674 89 34 1 471 559 88 175 2.01e-25 103
Msa0204270 MtrunA17_Chr4g0065261 52.778 72 33 1 188 259 88 158 1.51e-13 68.9
Msa0204270 MtrunA17_Chr8g0373571 45.000 80 44 0 474 553 260 339 2.61e-15 77.4
Msa0204270 MtrunA17_Chr8g0373571 44.928 69 38 0 188 256 257 325 1.01e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0204270 AT4G36730.2 40.000 80 48 0 474 553 220 299 1.15e-12 69.7
Msa0204270 AT4G36730.1 40.000 80 48 0 474 553 222 301 1.21e-12 69.7

Find 106 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGGACTGGCACAGAATT+TGG 0.131374 2_1:+29231292 Msa0204270:CDS
ATCTGGGATGGCTCAGAATT+TGG 0.139505 2_1:+29238947 Msa0204270:CDS
GATATCTTCTTCATACTTAA+AGG 0.172932 2_1:-29238747 None:intergenic
CACTCTTAAGGATGAAAATT+TGG 0.215284 2_1:+29239465 Msa0204270:CDS
GATTTCTGCTTCGTGCTTAA+AGG 0.221123 2_1:-29231095 None:intergenic
CTTTGCTACACGAGGATTAT+AGG 0.239162 2_1:-29237942 None:intergenic
GCAAATAATTTGTTGAAATC+AGG 0.241071 2_1:-29230715 None:intergenic
GGTATTCACAAGTTTCTCTA+TGG 0.250892 2_1:+29237553 Msa0204270:CDS
AAAGAAGAAAAGAAAGAAAA+AGG 0.264596 2_1:+29232008 Msa0204270:CDS
ACTGGGGAATCCACTAAATA+TGG 0.264921 2_1:+29238330 Msa0204270:CDS
AAGATATCTAACATGATTAT+TGG 0.278744 2_1:+29238762 Msa0204270:CDS
TGGAAGACCTTACAATTTCT+TGG 0.291343 2_1:+29230040 Msa0204270:CDS
GTTCCATCCCTATCATGTTT+TGG 0.310639 2_1:-29238369 None:intergenic
TCTGGGATGGCTCAGAATTT+GGG 0.322428 2_1:+29238948 Msa0204270:CDS
TCTGGACTGGCACAGAATTT+GGG 0.326766 2_1:+29231293 Msa0204270:CDS
GTACCTAATATGTTGAAATC+TGG 0.329022 2_1:-29238276 None:intergenic
GATTTCAACAAATTATTTGC+TGG 0.331658 2_1:+29230718 Msa0204270:CDS
TGTGGTAGCATAGGATTGTT+TGG 0.336905 2_1:-29230180 None:intergenic
TCAGTTTGTGATGGTATCTT+TGG 0.337539 2_1:+29230246 Msa0204270:CDS
AACCCAGATTTCAACATATT+AGG 0.342691 2_1:+29238273 Msa0204270:CDS
GAACAAACTGTACCTCATTA+AGG 0.349941 2_1:-29238391 None:intergenic
CACTCTTAAGGATGAAAATT+CGG 0.352734 2_1:+29232301 Msa0204270:CDS
GCTCAGTGAGCATTTGTGTT+AGG 0.359601 2_1:-29232325 None:intergenic
GTTCAGCGAGTGTTTGTGTT+AGG 0.360568 2_1:-29239489 None:intergenic
TGTGGTAGCATAGGTTTGTT+TGG 0.366044 2_1:-29237738 None:intergenic
TACTTTGTAGAAAATCCATC+TGG 0.371434 2_1:+29238930 Msa0204270:CDS
AAGAAAGAATCCATTCCATT+TGG 0.377393 2_1:+29230020 Msa0204270:CDS
CTTCGGCACCAAAACATGAT+AGG 0.378399 2_1:+29238361 Msa0204270:CDS
GAAGAGCTCGTTAAGGAGTA+TGG 0.378867 2_1:+29239980 Msa0204270:CDS
TGGCAGACCTTACAATATCT+TGG 0.383413 2_1:+29237598 Msa0204270:CDS
CAATCCTATGCTACCACATT+GGG 0.403246 2_1:+29230185 Msa0204270:CDS
GTGGTAGCATAGGATTGTTT+GGG 0.407012 2_1:-29230179 None:intergenic
TACCTAATATGTTGAAATCT+GGG 0.420755 2_1:-29238275 None:intergenic
TCAAAAGATAAACACTCTTA+AGG 0.422261 2_1:+29232289 Msa0204270:CDS
TCAAAAGATAAACACTCTTA+AGG 0.422261 2_1:+29239453 Msa0204270:CDS
ACAAGCTTCGCGAGCTTGAT+GGG 0.436415 2_1:+29229996 Msa0204270:CDS
AAGATCAAAGATAAAGAAAC+AGG 0.437513 2_1:+29232054 Msa0204270:CDS
AAGATCAAAGATAAAGAAAC+AGG 0.437513 2_1:+29239232 Msa0204270:CDS
AATAGATCCGCAATTGATTC+TGG 0.439062 2_1:-29240004 None:intergenic
CCAGTCATTAAACTTACATC+AGG 0.439376 2_1:-29230751 None:intergenic
CAAATAATTTGTTGAAATCA+GGG 0.443190 2_1:-29230714 None:intergenic
TACAAGCTTCGCGAGCTTGA+TGG 0.447733 2_1:+29229995 Msa0204270:CDS
CAAACCTATGCTACCACATT+GGG 0.449072 2_1:+29237743 Msa0204270:CDS
AAGAAAGAATCCAATCCATT+TGG 0.450101 2_1:+29237578 Msa0204270:CDS
AGACTGGTTTCCATATTTAG+TGG 0.453132 2_1:-29238340 None:intergenic
CTGTCTTAAGTTTAATGACT+GGG 0.461190 2_1:+29238313 Msa0204270:CDS
GTATTCACAAGTTTCTCTAT+GGG 0.479826 2_1:+29237554 Msa0204270:CDS
GTAAGGTCTGCCAAATGGAT+TGG 0.481419 2_1:-29237588 None:intergenic
TGCTCTGAATCAGTTTGTGA+TGG 0.487751 2_1:+29230237 Msa0204270:CDS
TGAGGCACCAAGAAATTGTA+AGG 0.489679 2_1:-29230047 None:intergenic
TCACAATTTCAGGAAGCTAC+GGG 0.499660 2_1:+29229969 Msa0204270:intron
CCTGTCTTAAGTTTAATGAC+TGG 0.500026 2_1:+29238312 Msa0204270:CDS
TTCACAATTTCAGGAAGCTA+CGG 0.505089 2_1:+29229968 Msa0204270:intron
AAATTGTAAGGTCTTCCAAA+TGG 0.515432 2_1:-29230035 None:intergenic
TTTGTCGTAGAAAATCCATC+TGG 0.517540 2_1:+29231275 Msa0204270:intron
CCAGTCATTAAACTTAAGAC+AGG 0.517784 2_1:-29238312 None:intergenic
TGCGGCGCCAAGATATTGTA+AGG 0.526271 2_1:-29237605 None:intergenic
ATATTGTAAGGTCTGCCAAA+TGG 0.533345 2_1:-29237593 None:intergenic
GTAAGGTCTTCCAAATGGAA+TGG 0.539472 2_1:-29230030 None:intergenic
AAATTCTGTGCCAGTCCAGA+TGG 0.539538 2_1:-29231290 None:intergenic
ACAATCCTATGCTACCACAT+TGG 0.545067 2_1:+29230184 Msa0204270:CDS
TAAATATGGAAACCAGTCTT+CGG 0.545195 2_1:+29238344 Msa0204270:CDS
GTCTCCCAATGTGGTAGCAT+AGG 0.546045 2_1:-29237747 None:intergenic
TTCGGCACCAAAACATGATA+GGG 0.546179 2_1:+29238362 Msa0204270:CDS
CAATGAAAACGATTCTATTG+AGG 0.546332 2_1:+29232373 Msa0204270:CDS
CAATGAAAACGATTCTATTG+AGG 0.546332 2_1:+29239537 Msa0204270:CDS
AATATTTATTCAGGAAGCTA+CGG 0.551586 2_1:+29237532 Msa0204270:intron
TCTAACATGATTATTGGTGA+TGG 0.558881 2_1:+29238768 Msa0204270:CDS
CGTAGAAAATCCATCTGGAC+TGG 0.560287 2_1:+29231280 Msa0204270:intron
GTATCCCAATGTGGTAGCAT+AGG 0.561713 2_1:-29230189 None:intergenic
GGATTATAGGAGAGCTCCGT+GGG 0.562325 2_1:-29237929 None:intergenic
TCTAACATGATTACTGAGGA+TGG 0.563608 2_1:+29231116 Msa0204270:CDS
CTGGGATGGCTCAGAATTTG+GGG 0.567456 2_1:+29238949 Msa0204270:CDS
GGAAGCAAGAGATCAACAGA+TGG 0.570698 2_1:+29230930 Msa0204270:CDS
ACAAACCTATGCTACCACAT+TGG 0.572867 2_1:+29237742 Msa0204270:CDS
ACATTGGGAGACAACTATGC+AGG 0.573997 2_1:+29237758 Msa0204270:CDS
CCTGATGTAAGTTTAATGAC+TGG 0.574077 2_1:+29230751 Msa0204270:CDS
CTATAATCCTCGTGTAGCAA+AGG 0.574947 2_1:+29237943 Msa0204270:CDS
GGAACAGGAAGAGCTCGTTA+AGG 0.581436 2_1:+29239973 Msa0204270:intron
AAATTCTGAGCCATCCCAGA+TGG 0.581446 2_1:-29238945 None:intergenic
AATGATTTACTGACATCTTG+AGG 0.581467 2_1:-29230065 None:intergenic
ACATTGGGATACAACTATGC+AGG 0.582030 2_1:+29230200 Msa0204270:CDS
CATGATTTACTGACATCTTG+CGG 0.599625 2_1:-29237623 None:intergenic
CTGGACTGGCACAGAATTTG+GGG 0.608435 2_1:+29231294 Msa0204270:CDS
TGTAGAAAATCCATCTGGGA+TGG 0.612430 2_1:+29238935 Msa0204270:CDS
GCACCAAAACATGATAGGGA+TGG 0.614432 2_1:+29238366 Msa0204270:CDS
CACATGAACTGCAGTTGATG+TGG 0.616279 2_1:+29238887 Msa0204270:intron
TTTCATATATTATGGCCAGC+CGG 0.618915 2_1:+29237794 Msa0204270:CDS
GAATTTGGGGACTGTCGTCA+AGG 0.620583 2_1:+29238962 Msa0204270:CDS
TGATGCTCTACATGATCCCA+CGG 0.627640 2_1:+29237913 Msa0204270:CDS
CAAGCTTCGCGAGCTTGATG+GGG 0.630322 2_1:+29229997 Msa0204270:CDS
ACTTTGTAGAAAATCCATCT+GGG 0.631448 2_1:+29238931 Msa0204270:CDS
TGACTCACCTTTGCTACACG+AGG 0.642236 2_1:-29237950 None:intergenic
TATGTGCGCAGTGCAGCAAG+TGG 0.644014 2_1:+29230909 Msa0204270:intron
TATGTGCGCAGTGCAGCAAG+TGG 0.644014 2_1:+29238494 Msa0204270:intron
ATAGGGATGGAACCTTAATG+AGG 0.644156 2_1:+29238379 Msa0204270:CDS
TGCATAGTTGTCTCCCAATG+TGG 0.648736 2_1:-29237756 None:intergenic
TGTCTTAAGTTTAATGACTG+GGG 0.648757 2_1:+29238314 Msa0204270:CDS
TGGTAGCATAGGATTGTTTG+GGG 0.662538 2_1:-29230178 None:intergenic
TATTCACAAGTTTCTCTATG+GGG 0.663057 2_1:+29237555 Msa0204270:CDS
GAAATCTAACATGATTACTG+AGG 0.663898 2_1:+29231112 Msa0204270:CDS
GAATTTGGGGACACTCGTCA+AGG 0.665454 2_1:+29231307 Msa0204270:CDS
AGGATTATAGGAGAGCTCCG+TGG 0.667369 2_1:-29237930 None:intergenic
TGCATAGTTGTATCCCAATG+TGG 0.691783 2_1:-29230198 None:intergenic
ATCAGGATGGAACTTCAATG+AGG 0.698766 2_1:+29230818 Msa0204270:CDS
GTATGGACCAGAATCAATTG+CGG 0.711023 2_1:+29239997 Msa0204270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGAATATAAAAGAAAA+AGG - chr2_1:29229358-29229377 None:intergenic 10.0%
!!! TAGGATTATTATATATTTTA+GGG + chr2_1:29229648-29229667 Msa0204270:intron 10.0%
!! TTCATTAATAGATATATTTA+TGG + chr2_1:29230352-29230371 Msa0204270:intron 10.0%
!! TTATAAATCATAATAAAACA+TGG - chr2_1:29231183-29231202 None:intergenic 10.0%
!!! ATGTTTGAAATTTTTTATTA+TGG - chr2_1:29233535-29233554 None:intergenic 10.0%
!!! CTATTGTTTTTTTAAATTTA+TGG - chr2_1:29233771-29233790 None:intergenic 10.0%
!! TAAAACTAATAGAATTAAAA+TGG + chr2_1:29235883-29235902 Msa0204270:intron 10.0%
!!! TTTAATTTTTTCTTTTTTGA+AGG + chr2_1:29235937-29235956 Msa0204270:intron 10.0%
!!! TAATATGGAATATTTTATTA+TGG + chr2_1:29235999-29236018 Msa0204270:intron 10.0%
!!! ACATTTTTTAAAATTTGTTT+TGG - chr2_1:29236218-29236237 None:intergenic 10.0%
!!! ATTTTTGTCAAAAAAATATT+TGG - chr2_1:29236339-29236358 None:intergenic 10.0%
!! TAAAAATAAAAATTGATCAA+TGG - chr2_1:29236459-29236478 None:intergenic 10.0%
!!! GATTAAATTTTATATAAATG+TGG + chr2_1:29238571-29238590 Msa0204270:intron 10.0%
!!! AATATTATGTGATTTAGTTT+TGG + chr2_1:29229383-29229402 Msa0204270:intron 15.0%
!!! GTAGGATTATTATATATTTT+AGG + chr2_1:29229647-29229666 Msa0204270:intron 15.0%
!!! TTTTACAAATTTTCCAATTT+TGG - chr2_1:29229804-29229823 None:intergenic 15.0%
!! AATTGAATAATTGTGAATAA+AGG - chr2_1:29230334-29230353 None:intergenic 15.0%
!!! GATATTTTTCATATTTTCTA+TGG + chr2_1:29230492-29230511 Msa0204270:intron 15.0%
!!! ATAAAAGTATTTATGCATTT+TGG + chr2_1:29230646-29230665 Msa0204270:intron 15.0%
!!! CAACATTCATATAAAATTTT+CGG + chr2_1:29231033-29231052 Msa0204270:intron 15.0%
!! TTTGTTTAAAAATTCTACTA+CGG - chr2_1:29231635-29231654 None:intergenic 15.0%
!!! ATTTTTGTTCAATTAGAAAA+AGG + chr2_1:29232477-29232496 Msa0204270:intron 15.0%
!! TTAAATAAACTAAGAAACAA+TGG + chr2_1:29232534-29232553 Msa0204270:intron 15.0%
!! TTGATATCTATATTACTAAA+AGG + chr2_1:29233055-29233074 Msa0204270:intron 15.0%
!!! TTTTATTTTTAAAGGAAGTT+TGG - chr2_1:29233580-29233599 None:intergenic 15.0%
!!! GCTTTAAAGTATAATAAATA+TGG + chr2_1:29234087-29234106 Msa0204270:intron 15.0%
!! GAAAATATAAAGAATGAAAA+TGG + chr2_1:29234302-29234321 Msa0204270:intron 15.0%
!!! GTTTTATCATATATTTTTGT+AGG - chr2_1:29235248-29235267 None:intergenic 15.0%
!!! CGTTTTCATTTTTTTTAATA+TGG + chr2_1:29235984-29236003 Msa0204270:intron 15.0%
!! AAACAGAATATAAAAGAAAA+AGG - chr2_1:29236969-29236988 None:intergenic 15.0%
!! TCAAGATTTAAGAAAATAAT+AGG + chr2_1:29237180-29237199 Msa0204270:intron 15.0%
!!! ATAGGAGATTTAATTTTATT+TGG + chr2_1:29237198-29237217 Msa0204270:intron 15.0%
!!! ATTTATCAATCTATCAATTT+TGG - chr2_1:29237433-29237452 None:intergenic 15.0%
!! TAAAATGCAAATATTTATTC+AGG + chr2_1:29237523-29237542 Msa0204270:intron 15.0%
!! ATTTATCAATATCAATTGAA+AGG - chr2_1:29237979-29237998 None:intergenic 15.0%
!!! TGGAATTTTCATATTTTTTT+AGG + chr2_1:29238076-29238095 Msa0204270:intron 15.0%
!!! GGAATTTTCATATTTTTTTA+GGG + chr2_1:29238077-29238096 Msa0204270:intron 15.0%
!!! GAATTTTCATATTTTTTTAG+GGG + chr2_1:29238078-29238097 Msa0204270:intron 15.0%
!!! TTTGAAATTTTTCTTTAGTA+GGG + chr2_1:29238670-29238689 Msa0204270:intron 15.0%
!! TCAAATTATAGATCAAAATA+AGG - chr2_1:29238841-29238860 None:intergenic 15.0%
!!! AATTATTTATTTTCCAAGAT+TGG + chr2_1:29239860-29239879 Msa0204270:intron 15.0%
!! AAAAAACACTGTTATGTATA+GGG - chr2_1:29229442-29229461 None:intergenic 20.0%
!!! ATTATTTTTTCTATGAACAC+CGG + chr2_1:29229498-29229517 Msa0204270:intron 20.0%
!!! TTTTGATTTTTCTCCAAAAT+TGG + chr2_1:29229788-29229807 Msa0204270:intron 20.0%
!!! TTTTTTTATCATTTTTCCCA+TGG + chr2_1:29230389-29230408 Msa0204270:intron 20.0%
!! AACTATAAAATGAATACCAT+GGG - chr2_1:29230408-29230427 None:intergenic 20.0%
!! TAACTATAAAATGAATACCA+TGG - chr2_1:29230409-29230428 None:intergenic 20.0%
!! TATAGTTAGTGTATATTTAG+TGG + chr2_1:29230421-29230440 Msa0204270:intron 20.0%
!!! TGGAATTTTCATATTTCTTT+AGG + chr2_1:29230441-29230460 Msa0204270:intron 20.0%
!!! GGAATTTTCATATTTCTTTA+GGG + chr2_1:29230442-29230461 Msa0204270:intron 20.0%
!! CTAAATATACACTAACTATA+AGG - chr2_1:29230421-29230440 None:intergenic 20.0%
!! TCATAATACACAATTCAATA+TGG - chr2_1:29230612-29230631 None:intergenic 20.0%
!!! CAAATAATTTGTTGAAATCA+GGG - chr2_1:29230717-29230736 None:intergenic 20.0%
!! TGATGCTAAACTAAAAAATA+TGG + chr2_1:29231352-29231371 Msa0204270:CDS 20.0%
!!! TTTTTGTAGCATAAATGAAA+AGG + chr2_1:29231394-29231413 Msa0204270:intron 20.0%
!!! GAAAAGGTTTTTTTTTTTAG+TGG + chr2_1:29231410-29231429 Msa0204270:intron 20.0%
!! GTTGTTAAATAATATGTGAT+AGG + chr2_1:29231575-29231594 Msa0204270:intron 20.0%
!!! TGGTAACATTTTAACATAAA+AGG - chr2_1:29231883-29231902 None:intergenic 20.0%
!! CAAAAGAAATGAAACTAAAT+AGG - chr2_1:29231974-29231993 None:intergenic 20.0%
!! AAAGAAGAAAAGAAAGAAAA+AGG + chr2_1:29232008-29232027 Msa0204270:CDS 20.0%
!! ATGTAAAAAGAAAAAGATGT+TGG + chr2_1:29232112-29232131 Msa0204270:intron 20.0%
!! ATAATTTAAAAGATCAGAGT+AGG - chr2_1:29232151-29232170 None:intergenic 20.0%
!! AAAATTGAACAAATAAGTAG+CGG - chr2_1:29232414-29232433 None:intergenic 20.0%
!! ACAAATATTAGAAAACAAGA+TGG - chr2_1:29232503-29232522 None:intergenic 20.0%
!! CTTAAATTAGTAGCAATATT+GGG - chr2_1:29232723-29232742 None:intergenic 20.0%
!! ACTTAAATTAGTAGCAATAT+TGG - chr2_1:29232724-29232743 None:intergenic 20.0%
!!! TCCTTTTTTAAATTGTTTCT+TGG - chr2_1:29232890-29232909 None:intergenic 20.0%
!!! TTTAGACATTTAAGATAATG+CGG + chr2_1:29232967-29232986 Msa0204270:intron 20.0%
!! AATTACTATGACTAACAATA+AGG + chr2_1:29233251-29233270 Msa0204270:intron 20.0%
!! ATTACTATGACTAACAATAA+GGG + chr2_1:29233252-29233271 Msa0204270:intron 20.0%
!!! ATTCCTATTCAATCTTTTAA+AGG + chr2_1:29233506-29233525 Msa0204270:intron 20.0%
!!! ATACCTTTAAAAGATTGAAT+AGG - chr2_1:29233512-29233531 None:intergenic 20.0%
!!! TTAAAGCTTTATTATAGACT+TGG - chr2_1:29234074-29234093 None:intergenic 20.0%
!! AAGAAAGTAAGATAGAAAAT+AGG + chr2_1:29234930-29234949 Msa0204270:intron 20.0%
!! TTAAAATCTTACAAACTCTT+GGG - chr2_1:29235017-29235036 None:intergenic 20.0%
!! ATTAAAATCTTACAAACTCT+TGG - chr2_1:29235018-29235037 None:intergenic 20.0%
!!! GGAAAAAGTTACAAATTTTT+CGG + chr2_1:29235904-29235923 Msa0204270:intron 20.0%
!! ATGATTATCCAAATTTATTG+AGG + chr2_1:29236241-29236260 Msa0204270:intron 20.0%
!! TGATTATCCAAATTTATTGA+GGG + chr2_1:29236242-29236261 Msa0204270:intron 20.0%
!!! TTTTATGTTCTTTTCGATTA+GGG - chr2_1:29236814-29236833 None:intergenic 20.0%
!!! TTTTTATGTTCTTTTCGATT+AGG - chr2_1:29236815-29236834 None:intergenic 20.0%
!! AATGTAAAAGAACAAAACTT+AGG - chr2_1:29236843-29236862 None:intergenic 20.0%
!!! TATTTTAAAAAATTCAGGTC+AGG + chr2_1:29237263-29237282 Msa0204270:intron 20.0%
!! TTCAAATTTCAATTGAATAC+AGG + chr2_1:29237288-29237307 Msa0204270:intron 20.0%
!! TCAATTAAATTGTGTTTGAT+TGG + chr2_1:29237341-29237360 Msa0204270:intron 20.0%
!! ACATAATGTGAAAGAATATT+TGG - chr2_1:29237483-29237502 None:intergenic 20.0%
!! CATAGTTAGTATATATTTAG+CGG + chr2_1:29238047-29238066 Msa0204270:intron 20.0%
!!! CAAATAATGTTTATGCATTT+TGG + chr2_1:29238207-29238226 Msa0204270:intron 20.0%
!!! TTGTTAATAGCATTTTTCTA+AGG + chr2_1:29238431-29238450 Msa0204270:intron 20.0%
!!! CTTTGAAATTTTTCTTTAGT+AGG + chr2_1:29238669-29238688 Msa0204270:intron 20.0%
!! AAGATATCTAACATGATTAT+TGG + chr2_1:29238762-29238781 Msa0204270:CDS 20.0%
!!! TTTTCATAGCTAAATATGTA+TGG + chr2_1:29239049-29239068 Msa0204270:intron 20.0%
!! CAACATTTATAAATAGGAAA+TGG + chr2_1:29239283-29239302 Msa0204270:intron 20.0%
!! AAAATTGAACAAGTAAGAAA+GGG - chr2_1:29239578-29239597 None:intergenic 20.0%
!! TAAAATTGAACAAGTAAGAA+AGG - chr2_1:29239579-29239598 None:intergenic 20.0%
!! AATAGAATCGTTTACATTAA+TGG - chr2_1:29239745-29239764 None:intergenic 20.0%
!! TTGCTAATTTGATTGTAATT+TGG + chr2_1:29239946-29239965 Msa0204270:intron 20.0%
! CAAAAAACACTGTTATGTAT+AGG - chr2_1:29229443-29229462 None:intergenic 25.0%
! ATATTTGTTTCAAATTGCGT+AGG + chr2_1:29229629-29229648 Msa0204270:intron 25.0%
! TAAAATACCTTGTGTTTGAT+TGG + chr2_1:29229712-29229731 Msa0204270:intron 25.0%
!! GATGTCAGTAAATCATTTTA+TGG + chr2_1:29230071-29230090 Msa0204270:intron 25.0%
!!! CAGTTTTTTTTCTACGTAAA+AGG - chr2_1:29230286-29230305 None:intergenic 25.0%
! TTACTAGTGAAATGATTTGA+TGG + chr2_1:29230561-29230580 Msa0204270:intron 25.0%
!!! GCAAATAATTTGTTGAAATC+AGG - chr2_1:29230718-29230737 None:intergenic 25.0%
! GATTTCAACAAATTATTTGC+TGG + chr2_1:29230718-29230737 Msa0204270:CDS 25.0%
!!! AAGTTTTTTGTTCAGTCTTT+GGG - chr2_1:29230889-29230908 None:intergenic 25.0%
!!! AAAGTTTTTTGTTCAGTCTT+TGG - chr2_1:29230890-29230909 None:intergenic 25.0%
! GACATCATAATGATTCAAAA+GGG - chr2_1:29231488-29231507 None:intergenic 25.0%
! AAAAATTCTACTACGGTATA+GGG - chr2_1:29231628-29231647 None:intergenic 25.0%
! TAAAAATTCTACTACGGTAT+AGG - chr2_1:29231629-29231648 None:intergenic 25.0%
! GAAGATGATTATAACTATAG+TGG - chr2_1:29231748-29231767 None:intergenic 25.0%
! AAGAAAGTTGGATTGATAAA+TGG - chr2_1:29231906-29231925 None:intergenic 25.0%
!! TTAGTTTCATTTCTTTTGAC+AGG + chr2_1:29231976-29231995 Msa0204270:intron 25.0%
! AAGATCAAAGATAAAGAAAC+AGG + chr2_1:29232054-29232073 Msa0204270:CDS 25.0%
! TCAAAAGATAAACACTCTTA+AGG + chr2_1:29232289-29232308 Msa0204270:CDS 25.0%
! GTCATTTATCAAGATAAACT+TGG - chr2_1:29232618-29232637 None:intergenic 25.0%
! CTACTAATTTAAGTGTGATT+TGG + chr2_1:29232730-29232749 Msa0204270:intron 25.0%
! GCCAAGAAACAATTTAAAAA+AGG + chr2_1:29232886-29232905 Msa0204270:intron 25.0%
! AATATTGATACATTGTCATG+TGG + chr2_1:29233161-29233180 Msa0204270:intron 25.0%
!! AGTCATAGTAATTTTTGATG+AGG - chr2_1:29233244-29233263 None:intergenic 25.0%
!!! TACTATTTTTCCCTTTTCTA+GGG - chr2_1:29233681-29233700 None:intergenic 25.0%
! TATAGAAAGTCACAATTGAA+TGG - chr2_1:29233898-29233917 None:intergenic 25.0%
!!! AAAGAGAAACATTCTTGTTT+TGG + chr2_1:29234280-29234299 Msa0204270:intron 25.0%
! TGATATCATCAACATATCAT+TGG - chr2_1:29234362-29234381 None:intergenic 25.0%
!! TTAACAATACTAGTTTAGAG+TGG - chr2_1:29234424-29234443 None:intergenic 25.0%
!! TTTTTCATACTTTTGTCTCT+AGG - chr2_1:29234807-29234826 None:intergenic 25.0%
! CTATCTTACTTTCTTGAAAA+TGG - chr2_1:29234925-29234944 None:intergenic 25.0%
! TAAAATCTTACAAACTCTTG+GGG - chr2_1:29235016-29235035 None:intergenic 25.0%
! TTATAACACTCCTTTATGAA+AGG - chr2_1:29235060-29235079 None:intergenic 25.0%
! TCCAAGTTAATAGCATATAA+CGG + chr2_1:29235215-29235234 Msa0204270:intron 25.0%
! TATGATAAAACTAAAGTGAC+CGG + chr2_1:29235257-29235276 Msa0204270:intron 25.0%
! CGATTATTCAATCAAAGATT+TGG - chr2_1:29235317-29235336 None:intergenic 25.0%
! TTGAAATAGAGAGAAAAAGA+TGG + chr2_1:29235483-29235502 Msa0204270:intron 25.0%
! TCTTCCAATTTCTTCATTAA+GGG - chr2_1:29235549-29235568 None:intergenic 25.0%
! TTCTTCCAATTTCTTCATTA+AGG - chr2_1:29235550-29235569 None:intergenic 25.0%
! TAGTTATAACACTTACAGAA+TGG - chr2_1:29235633-29235652 None:intergenic 25.0%
! AAACTCGCATATTTAGTTAT+TGG + chr2_1:29235662-29235681 Msa0204270:intron 25.0%
! TATAATAAGCCCACTTTATA+AGG - chr2_1:29235714-29235733 None:intergenic 25.0%
!! TGAAGGAATAAGAGTATATT+TGG + chr2_1:29235954-29235973 Msa0204270:intron 25.0%
!! AAACTGTGAGAAATGTTTTT+AGG - chr2_1:29236895-29236914 None:intergenic 25.0%
! ATTAAATTGTGTTTGATTGG+TGG + chr2_1:29237344-29237363 Msa0204270:intron 25.0%
!!! TTTGCATTTTAATCAAACAC+CGG - chr2_1:29237514-29237533 None:intergenic 25.0%
! AATATTTATTCAGGAAGCTA+CGG + chr2_1:29237532-29237551 Msa0204270:intron 25.0%
!! TTTTGTCGTAGTTTAAAAAC+CGG - chr2_1:29237816-29237835 None:intergenic 25.0%
!!! TTTTCACACTCTTTTTTGTT+TGG + chr2_1:29237862-29237881 Msa0204270:intron 25.0%
! CGCTAAATATATACTAACTA+TGG - chr2_1:29238049-29238068 None:intergenic 25.0%
!!! TATATATTTAGCGGATTTAG+TGG + chr2_1:29238056-29238075 Msa0204270:intron 25.0%
!!! TTTCATATTTTTTTAGGGGT+AGG + chr2_1:29238082-29238101 Msa0204270:intron 25.0%
!!! TTCATATTTTTTTAGGGGTA+GGG + chr2_1:29238083-29238102 Msa0204270:intron 25.0%
! AACTCATACACAATTAAGTA+TGG - chr2_1:29238173-29238192 None:intergenic 25.0%
! TACCTAATATGTTGAAATCT+GGG - chr2_1:29238278-29238297 None:intergenic 25.0%
! CTTAGAAAAATGCTATTAAC+AGG - chr2_1:29238433-29238452 None:intergenic 25.0%
!! CTGTTAATAGCATTTTTCTA+AGG + chr2_1:29238455-29238474 Msa0204270:intron 25.0%
! CTAACTTCTTAAGATAAAAG+TGG - chr2_1:29238619-29238638 None:intergenic 25.0%
! AGTAGGGTTATACAAAATTT+CGG + chr2_1:29238686-29238705 Msa0204270:intron 25.0%
! GTCTAATTACATAGTTTCTT+TGG + chr2_1:29238715-29238734 Msa0204270:intron 25.0%
! GATATCTTCTTCATACTTAA+AGG - chr2_1:29238750-29238769 None:intergenic 25.0%
! CTATAATTTGAATGTTCAGA+AGG + chr2_1:29238850-29238869 Msa0204270:intron 25.0%
! TGATGCTCAACTAAAAAATA+TGG + chr2_1:29234842-29234861 Msa0204270:intron 25.0%
! AAACTTAGCAACATTAAGAA+GGG - chr2_1:29239098-29239117 None:intergenic 25.0%
! TAAACTTAGCAACATTAAGA+AGG - chr2_1:29239099-29239118 None:intergenic 25.0%
! CAAAAGAAATGCTACTAAAT+TGG - chr2_1:29239152-29239171 None:intergenic 25.0%
! AAGATCAAAGATAAAGAAAC+AGG + chr2_1:29232054-29232073 Msa0204270:CDS 25.0%
! GCATTGCAACATTTATAAAT+AGG + chr2_1:29239277-29239296 Msa0204270:intron 25.0%
! TCAAAAGATAAACACTCTTA+AGG + chr2_1:29232289-29232308 Msa0204270:CDS 25.0%
!! AATGGACATCTTATGATTTT+TGG - chr2_1:29239727-29239746 None:intergenic 25.0%
! ACATCTTTATAAACCAATCT+TGG - chr2_1:29239876-29239895 None:intergenic 25.0%
! AATCAAATTAGCAACAATCT+TGG - chr2_1:29239940-29239959 None:intergenic 25.0%
! CTAATTTGATTGTAATTTGG+TGG + chr2_1:29239949-29239968 Msa0204270:intron 25.0%
GAAACTCACTCGTAAAAATA+GGG - chr2_1:29229220-29229239 None:intergenic 30.0%
TGAAACTCACTCGTAAAAAT+AGG - chr2_1:29229221-29229240 None:intergenic 30.0%
CTAAAAACAGTTCTTCTCAA+CGG + chr2_1:29229279-29229298 Msa0204270:intron 30.0%
!! AGGAACTTTTCATTTGGAAT+CGG + chr2_1:29229527-29229546 Msa0204270:intron 30.0%
TGGATTGTGTAATTGAATAC+AGG + chr2_1:29229686-29229705 Msa0204270:intron 30.0%
GGATTGTGTAATTGAATACA+GGG + chr2_1:29229687-29229706 Msa0204270:intron 30.0%
AATGGTTTATCAGGTTTGAT+AGG - chr2_1:29229876-29229895 None:intergenic 30.0%
AAACCTGATAAACCATTATC+TGG + chr2_1:29229879-29229898 Msa0204270:intron 30.0%
! ATACCAGATAATGGTTTATC+AGG - chr2_1:29229885-29229904 None:intergenic 30.0%
TGATAAACCATTATCTGGTA+TGG + chr2_1:29229884-29229903 Msa0204270:intron 30.0%
AAGAAAGAATCCATTCCATT+TGG + chr2_1:29230020-29230039 Msa0204270:CDS 30.0%
AAATTGTAAGGTCTTCCAAA+TGG - chr2_1:29230038-29230057 None:intergenic 30.0%
AATGATTTACTGACATCTTG+AGG - chr2_1:29230068-29230087 None:intergenic 30.0%
!! AGTATTTATGCATTTTGGTC+AGG + chr2_1:29230651-29230670 Msa0204270:intron 30.0%
!!! ACAGTTTGTTCTTGTTTTTC+TGG + chr2_1:29230842-29230861 Msa0204270:intron 30.0%
GTCTAATTAAATCCTTTCTG+TGG + chr2_1:29231063-29231082 Msa0204270:intron 30.0%
GAAATCTAACATGATTACTG+AGG + chr2_1:29231112-29231131 Msa0204270:CDS 30.0%
TACTGAGGATGGTAAAATTA+TGG + chr2_1:29231127-29231146 Msa0204270:intron 30.0%
TAAAATGCAGTTCATGTGTT+TGG - chr2_1:29231230-29231249 None:intergenic 30.0%
AGCTAAACTAGAAGAACAAT+CGG + chr2_1:29231436-29231455 Msa0204270:intron 30.0%
GGACATCATAATGATTCAAA+AGG - chr2_1:29231489-29231508 None:intergenic 30.0%
! GATGTCCATATACTTTGAAA+AGG + chr2_1:29231502-29231521 Msa0204270:intron 30.0%
! AGTGACCTTTTCAAAGTATA+TGG - chr2_1:29231510-29231529 None:intergenic 30.0%
! TTGAAAAGGTCACTTTAACA+TGG + chr2_1:29231516-29231535 Msa0204270:intron 30.0%
ACTTATTGACAAGATATGCT+TGG + chr2_1:29231713-29231732 Msa0204270:intron 30.0%
! ACAAGTTGAAAAACTAACAC+AGG - chr2_1:29231770-29231789 None:intergenic 30.0%
ATAAAAGGCTCATATATGAC+AGG - chr2_1:29231868-29231887 None:intergenic 30.0%
AAAGTTGGATTGATAAATGG+TGG - chr2_1:29231903-29231922 None:intergenic 30.0%
ACTAGCAACATTAAGAAAGT+TGG - chr2_1:29231918-29231937 None:intergenic 30.0%
TCTTCATATTCTTTCTGACA+AGG - chr2_1:29232263-29232282 None:intergenic 30.0%
CACTCTTAAGGATGAAAATT+CGG + chr2_1:29232301-29232320 Msa0204270:CDS 30.0%
! CTCAATAGAATCGTTTTCAT+TGG - chr2_1:29232375-29232394 None:intergenic 30.0%
CAATGAAAACGATTCTATTG+AGG + chr2_1:29232373-29232392 Msa0204270:CDS 30.0%
CGAGGAATCAAAATAGTATA+CGG + chr2_1:29232562-29232581 Msa0204270:intron 30.0%
GAGGAATCAAAATAGTATAC+GGG + chr2_1:29232563-29232582 Msa0204270:intron 30.0%
! CTAATTTAAGTGTGATTTGG+TGG + chr2_1:29232733-29232752 Msa0204270:intron 30.0%
! AATAGATCTGCAATTGATTC+TGG - chr2_1:29232791-29232810 None:intergenic 30.0%
AGCAAGAAACAGTTTATGAT+AGG + chr2_1:29232845-29232864 Msa0204270:intron 30.0%
! CAATATTTGTTAGCAGAGAT+AGG - chr2_1:29233148-29233167 None:intergenic 30.0%
AGTTGTAGTTTCATGTTGTT+AGG - chr2_1:29233281-29233300 None:intergenic 30.0%
! GTTTGTTGAAATTAGAGGAA+AGG - chr2_1:29233397-29233416 None:intergenic 30.0%
!! TGCAAGTTTGTTGAAATTAG+AGG - chr2_1:29233402-29233421 None:intergenic 30.0%
!! CAATTGTATTTTTGCCAACA+AGG - chr2_1:29233426-29233445 None:intergenic 30.0%
GTGCTTATATTTAGTGGTAT+TGG - chr2_1:29233472-29233491 None:intergenic 30.0%
!! CTACTATTTTTCCCTTTTCT+AGG - chr2_1:29233682-29233701 None:intergenic 30.0%
AAAAACACCTCAGAAAACAA+AGG + chr2_1:29233813-29233832 Msa0204270:intron 30.0%
!!! ACTATTTCCTTTGTTTTCTG+AGG - chr2_1:29233823-29233842 None:intergenic 30.0%
AAAGTCACAATTGAATGGAA+AGG - chr2_1:29233893-29233912 None:intergenic 30.0%
CTTCTTGCAAGTATTTGATA+CGG + chr2_1:29233953-29233972 Msa0204270:intron 30.0%
! ATGGACTATATCTCTGAAAA+AGG - chr2_1:29233988-29234007 None:intergenic 30.0%
TTATATAATCAGCAGCAGTA+TGG - chr2_1:29234007-29234026 None:intergenic 30.0%
TGGAAGCTATAAAGAGATAA+TGG - chr2_1:29234054-29234073 None:intergenic 30.0%
ATATGGCATGCAATATGAAT+TGG + chr2_1:29234104-29234123 Msa0204270:intron 30.0%
AAGGGTTGCATGAAAAAAAA+CGG + chr2_1:29234212-29234231 Msa0204270:intron 30.0%
CATCAACATATCATTGGAAT+TGG - chr2_1:29234356-29234375 None:intergenic 30.0%
AGTTTCATAGTTGTGAGAAT+GGG + chr2_1:29234638-29234657 Msa0204270:intron 30.0%
TCTTACTTTCTTGAAAATGG+CGG - chr2_1:29234922-29234941 None:intergenic 30.0%
TTCTAAACTCATCTCGAATT+CGG - chr2_1:29234958-29234977 None:intergenic 30.0%
ATTAATATGCGTGTTTAGGT+GGG - chr2_1:29234991-29235010 None:intergenic 30.0%
AATTAATATGCGTGTTTAGG+TGG - chr2_1:29234992-29235011 None:intergenic 30.0%
GGAAATTAATATGCGTGTTT+AGG - chr2_1:29234995-29235014 None:intergenic 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG - chr2_1:29235174-29235193 None:intergenic 30.0%
! AGTGATTTTCACATAGATCT+AGG - chr2_1:29235455-29235474 None:intergenic 30.0%
TTCCAATTTCTTCATTAAGG+GGG - chr2_1:29235547-29235566 None:intergenic 30.0%
CTTCCAATTTCTTCATTAAG+GGG - chr2_1:29235548-29235567 None:intergenic 30.0%
AAACCTAGAGAGAAAAAACT+AGG + chr2_1:29235571-29235590 Msa0204270:intron 30.0%
AACCTAGAGAGAAAAAACTA+GGG + chr2_1:29235572-29235591 Msa0204270:intron 30.0%
!! ACCAAGTAATTAGTCTTAAG+TGG + chr2_1:29236054-29236073 Msa0204270:intron 30.0%
ACCACTTAAGACTAATTACT+TGG - chr2_1:29236058-29236077 None:intergenic 30.0%
AGAACATGAATTCGATTTCT+GGG + chr2_1:29236112-29236131 Msa0204270:intron 30.0%
! CTCTTTTCCCTCAATAAATT+TGG - chr2_1:29236252-29236271 None:intergenic 30.0%
! GATAAAATCGACAACTCTTT+TGG + chr2_1:29236291-29236310 Msa0204270:intron 30.0%
!! TTTTCAGGCTCAAAAAATTG+AGG + chr2_1:29236481-29236500 Msa0204270:intron 30.0%
TTTCAGGCTCAAAAAATTGA+GGG + chr2_1:29236482-29236501 Msa0204270:intron 30.0%
ACTAGTTACATTACACACAA+AGG + chr2_1:29236518-29236537 Msa0204270:intron 30.0%
ATTCACCAAAGAATGTTATG+TGG - chr2_1:29236579-29236598 None:intergenic 30.0%
GAAGACCTAAAATACATTGA+CGG + chr2_1:29236605-29236624 Msa0204270:intron 30.0%
AAGACCTAAAATACATTGAC+GGG + chr2_1:29236606-29236625 Msa0204270:intron 30.0%
ACTATTAGTCATTATGCAGT+TGG + chr2_1:29236647-29236666 Msa0204270:intron 30.0%
CTATTAGTCATTATGCAGTT+GGG + chr2_1:29236648-29236667 Msa0204270:intron 30.0%
ATAGCATAAAATTTGGCCAA+CGG - chr2_1:29236722-29236741 None:intergenic 30.0%
GACATCAATCAATAGCAATA+AGG - chr2_1:29237032-29237051 None:intergenic 30.0%
TTCAATTGAATACAGGATAG+TGG + chr2_1:29237295-29237314 Msa0204270:intron 30.0%
TCACATTATGTACAATATCC+CGG + chr2_1:29237492-29237511 Msa0204270:intron 30.0%
!! TTGCATTTTAATCAAACACC+GGG - chr2_1:29237513-29237532 None:intergenic 30.0%
GTATTCACAAGTTTCTCTAT+GGG + chr2_1:29237554-29237573 Msa0204270:CDS 30.0%
TATTCACAAGTTTCTCTATG+GGG + chr2_1:29237555-29237574 Msa0204270:CDS 30.0%
AAGAAAGAATCCAATCCATT+TGG + chr2_1:29237578-29237597 Msa0204270:CDS 30.0%
!!! AGGCTGGTTTTCATATATTA+TGG + chr2_1:29237786-29237805 Msa0204270:CDS 30.0%
! GGTTTTTAAACTACGACAAA+AGG + chr2_1:29237815-29237834 Msa0204270:intron 30.0%
ACCAACCTAAAAACTAGTTA+CGG - chr2_1:29237843-29237862 None:intergenic 30.0%
!! AATGTTTATGCATTTTGGTC+AGG + chr2_1:29238212-29238231 Msa0204270:intron 30.0%
AACCCAGATTTCAACATATT+AGG + chr2_1:29238273-29238292 Msa0204270:CDS 30.0%
GTACCTAATATGTTGAAATC+TGG - chr2_1:29238279-29238298 None:intergenic 30.0%
CTGTCTTAAGTTTAATGACT+GGG + chr2_1:29238313-29238332 Msa0204270:CDS 30.0%
TGTCTTAAGTTTAATGACTG+GGG + chr2_1:29238314-29238333 Msa0204270:CDS 30.0%
TAAATATGGAAACCAGTCTT+CGG + chr2_1:29238344-29238363 Msa0204270:CDS 30.0%
CTTAAGAAGTTAGAAGACTT+AGG + chr2_1:29238626-29238645 Msa0204270:intron 30.0%
AATTACATAGTTTCTTTGGC+AGG + chr2_1:29238719-29238738 Msa0204270:intron 30.0%
TCTAACATGATTATTGGTGA+TGG + chr2_1:29238768-29238787 Msa0204270:CDS 30.0%
! GGATTTTCTACAAAGTAACA+AGG - chr2_1:29238927-29238946 None:intergenic 30.0%
TACTTTGTAGAAAATCCATC+TGG + chr2_1:29238930-29238949 Msa0204270:CDS 30.0%
ACTTTGTAGAAAATCCATCT+GGG + chr2_1:29238931-29238950 Msa0204270:CDS 30.0%
! TTAGTAGCATTTCTTTTGAC+AGG + chr2_1:29239154-29239173 Msa0204270:intron 30.0%
AAAGAAAAAGACTGTCAAAC+AGG + chr2_1:29239198-29239217 Msa0204270:CDS 30.0%
TCTTCATATTCTTTCTGACA+AGG - chr2_1:29232263-29232282 None:intergenic 30.0%
CACTCTTAAGGATGAAAATT+TGG + chr2_1:29232301-29232320 Msa0204270:CDS 30.0%
! CTCAATAGAATCGTTTTCAT+TGG - chr2_1:29232375-29232394 None:intergenic 30.0%
CAATGAAAACGATTCTATTG+AGG + chr2_1:29232373-29232392 Msa0204270:CDS 30.0%
! ATTTGATTGTAATTTGGTGG+TGG + chr2_1:29239952-29239971 Msa0204270:intron 30.0%
AAAGAGTTGGCAAAAGTGAA+GGG - chr2_1:29229310-29229329 None:intergenic 35.0%
AGAAGTGAAAGTGAAAGAGT+TGG - chr2_1:29229323-29229342 None:intergenic 35.0%
AACTCTTTCACTTTCACTTC+TGG + chr2_1:29229322-29229341 Msa0204270:intron 35.0%
AACACTGTTATGTATAGGGT+TGG - chr2_1:29229438-29229457 None:intergenic 35.0%
! ATTGCCAGGAACTTTTCATT+TGG + chr2_1:29229521-29229540 Msa0204270:intron 35.0%
GATTCCAAATGAAAAGTTCC+TGG - chr2_1:29229528-29229547 None:intergenic 35.0%
! AAGGCTTGATGTGATTTTCT+TGG + chr2_1:29229556-29229575 Msa0204270:intron 35.0%
!! TAGGGTTTTCTTGTTGATAG+TGG + chr2_1:29229666-29229685 Msa0204270:intron 35.0%
AATACCTTGTGTTTGATTGG+TGG + chr2_1:29229715-29229734 Msa0204270:intron 35.0%
AGAATAAATCGCAGACTATC+TGG - chr2_1:29229913-29229932 None:intergenic 35.0%
TACAATATCTCGTGCTTGAT+GGG + chr2_1:29229944-29229963 Msa0204270:intron 35.0%
TTGATGGGATTCACAATTTC+AGG + chr2_1:29229959-29229978 Msa0204270:intron 35.0%
TTCACAATTTCAGGAAGCTA+CGG + chr2_1:29229968-29229987 Msa0204270:intron 35.0%
TGGAAGACCTTACAATTTCT+TGG + chr2_1:29230040-29230059 Msa0204270:CDS 35.0%
TCAGTTTGTGATGGTATCTT+TGG + chr2_1:29230246-29230265 Msa0204270:CDS 35.0%
CCAGTCATTAAACTTACATC+AGG - chr2_1:29230754-29230773 None:intergenic 35.0%
CCTGATGTAAGTTTAATGAC+TGG + chr2_1:29230751-29230770 Msa0204270:CDS 35.0%
!!! GTTCCATCCTGATCATTTTT+TGG - chr2_1:29230811-29230830 None:intergenic 35.0%
AATTAAATCCTTTCTGTGGC+AGG + chr2_1:29231067-29231086 Msa0204270:intron 35.0%
TCTAACATGATTACTGAGGA+TGG + chr2_1:29231116-29231135 Msa0204270:CDS 35.0%
! TGTCTAATAGTCTTGCATCT+TGG + chr2_1:29231252-29231271 Msa0204270:intron 35.0%
TTTGTCGTAGAAAATCCATC+TGG + chr2_1:29231275-29231294 Msa0204270:intron 35.0%
! TAGGCTGTGTTGTTAAATAG+CGG + chr2_1:29231594-29231613 Msa0204270:intron 35.0%
AAAGAAAAAGGCTGTCAAAC+AGG + chr2_1:29232020-29232039 Msa0204270:CDS 35.0%
! AGGTACATACGACAATGTTT+TGG + chr2_1:29232074-29232093 Msa0204270:intron 35.0%
!! ATTTAAGTGTGATTTGGTGG+CGG + chr2_1:29232736-29232755 Msa0204270:intron 35.0%
! AGCCTACTTGAAACTTTTTG+TGG + chr2_1:29232819-29232838 Msa0204270:intron 35.0%
! CACCACAAAAAGTTTCAAGT+AGG - chr2_1:29232824-29232843 None:intergenic 35.0%
! CTACTTGAAACTTTTTGTGG+TGG + chr2_1:29232822-29232841 Msa0204270:intron 35.0%
TACATTGTCATGTGGTGATA+AGG + chr2_1:29233169-29233188 Msa0204270:intron 35.0%
ACATTGTCATGTGGTGATAA+GGG + chr2_1:29233170-29233189 Msa0204270:intron 35.0%
! TGCCAATAATTTGCATAGTG+AGG + chr2_1:29233363-29233382 Msa0204270:intron 35.0%
TGCCTCACTATGCAAATTAT+TGG - chr2_1:29233368-29233387 None:intergenic 35.0%
ATTGGATTCACTCTTGAACA+GGG - chr2_1:29233454-29233473 None:intergenic 35.0%
TATTGGATTCACTCTTGAAC+AGG - chr2_1:29233455-29233474 None:intergenic 35.0%
GAGTGTGTGCTTATATTTAG+TGG - chr2_1:29233478-29233497 None:intergenic 35.0%
TTACCTTCAAACCCTAGAAA+AGG + chr2_1:29233667-29233686 Msa0204270:intron 35.0%
TACCTTCAAACCCTAGAAAA+GGG + chr2_1:29233668-29233687 Msa0204270:intron 35.0%
!! TAACTTGCTTAGGTAAGCAA+AGG - chr2_1:29233718-29233737 None:intergenic 35.0%
!! TAACTCGCTATAACTTGCTT+AGG - chr2_1:29233728-29233747 None:intergenic 35.0%
TGGTTATCGTGCACTATTTA+GGG - chr2_1:29233751-29233770 None:intergenic 35.0%
ATGGTTATCGTGCACTATTT+AGG - chr2_1:29233752-29233771 None:intergenic 35.0%
ACAAAGGAAATAGTGAGTTG+TGG + chr2_1:29233829-29233848 Msa0204270:intron 35.0%
CAAAGGAAATAGTGAGTTGT+GGG + chr2_1:29233830-29233849 Msa0204270:intron 35.0%
TTGCAAGTATTTGATACGGA+AGG + chr2_1:29233957-29233976 Msa0204270:intron 35.0%
AAAAGTCAGCATATCGTTGT+AGG + chr2_1:29234025-29234044 Msa0204270:intron 35.0%
ACCAGCATACAGAATATTTG+TGG + chr2_1:29234523-29234542 Msa0204270:intron 35.0%
ACCACAAATATTCTGTATGC+TGG - chr2_1:29234527-29234546 None:intergenic 35.0%
TTCATTGCAAAGCCTAAAAC+CGG - chr2_1:29234607-29234626 None:intergenic 35.0%
GAGTTTCATAGTTGTGAGAA+TGG + chr2_1:29234637-29234656 Msa0204270:intron 35.0%
GTAGTCCATATCCATATGTT+TGG + chr2_1:29234764-29234783 Msa0204270:intron 35.0%
TGGTTCCAAACATATGGATA+TGG - chr2_1:29234772-29234791 None:intergenic 35.0%
! TTTCTTGAAAATGGCGGAAA+GGG - chr2_1:29234916-29234935 None:intergenic 35.0%
GCCGTTATATGCTATTAACT+TGG - chr2_1:29235219-29235238 None:intergenic 35.0%
AAATGAACACCGCAAGAAAA+CGG + chr2_1:29235354-29235373 Msa0204270:intron 35.0%
! TTGAATTTCCCGTTTTCTTG+CGG - chr2_1:29235366-29235385 None:intergenic 35.0%
GTGATTTCATCATCTAAGTG+TGG - chr2_1:29235422-29235441 None:intergenic 35.0%
TAGAGAGAAAAAGATGGAGA+TGG + chr2_1:29235489-29235508 Msa0204270:intron 35.0%
AGAGAGAAAAAGATGGAGAT+GGG + chr2_1:29235490-29235509 Msa0204270:intron 35.0%
! TTCATTAAGGGGGTGATTTT+GGG - chr2_1:29235537-29235556 None:intergenic 35.0%
CACTTTATAAGGAGACACAA+GGG - chr2_1:29235703-29235722 None:intergenic 35.0%
CTTGTGTCTCCTTATAAAGT+GGG + chr2_1:29235702-29235721 Msa0204270:intron 35.0%
GGTTAATGAGCTGCAAATAA+AGG + chr2_1:29236075-29236094 Msa0204270:intron 35.0%
GAGAACATGAATTCGATTTC+TGG + chr2_1:29236111-29236130 Msa0204270:intron 35.0%
! AAAATCGACAACTCTTTTGG+TGG + chr2_1:29236294-29236313 Msa0204270:intron 35.0%
GAAGAGAAGAGAAAATGTTG+TGG - chr2_1:29236555-29236574 None:intergenic 35.0%
! TAGACCCGTCAATGTATTTT+AGG - chr2_1:29236613-29236632 None:intergenic 35.0%
TAGCATAAAATTTGGCCAAC+GGG - chr2_1:29236721-29236740 None:intergenic 35.0%
CGGGTCAATAGCATAAAATT+TGG - chr2_1:29236729-29236748 None:intergenic 35.0%
AGAAATGCTTCTGACTTTGT+AGG - chr2_1:29236867-29236886 None:intergenic 35.0%
ATTACCAGAAGCAAAAGTGA+AGG - chr2_1:29236940-29236959 None:intergenic 35.0%
CTTTCATCAGAGATAAACAC+TGG + chr2_1:29237124-29237143 Msa0204270:intron 35.0%
AGAATATTTGGCAGACTATC+TGG - chr2_1:29237471-29237490 None:intergenic 35.0%
GGTATTCACAAGTTTCTCTA+TGG + chr2_1:29237553-29237572 Msa0204270:CDS 35.0%
ATATTGTAAGGTCTGCCAAA+TGG - chr2_1:29237596-29237615 None:intergenic 35.0%
CATGATTTACTGACATCTTG+CGG - chr2_1:29237626-29237645 None:intergenic 35.0%
! AGACAACTATGCAGGTTTTT+AGG + chr2_1:29237766-29237785 Msa0204270:CDS 35.0%
TTTCATATATTATGGCCAGC+CGG + chr2_1:29237794-29237813 Msa0204270:CDS 35.0%
!!! AGGATCCGTAACTAGTTTTT+AGG + chr2_1:29237835-29237854 Msa0204270:intron 35.0%
!!! TCCGTAACTAGTTTTTAGGT+TGG + chr2_1:29237839-29237858 Msa0204270:intron 35.0%
!!! CACTCTTTTTTGTTTGGTGT+AGG + chr2_1:29237868-29237887 Msa0204270:intron 35.0%
!!! TATTTTTTTAGGGGTAGGGA+TGG + chr2_1:29238087-29238106 Msa0204270:intron 35.0%
!!! ATTTTTTTAGGGGTAGGGAT+GGG + chr2_1:29238088-29238107 Msa0204270:intron 35.0%
CCAGTCATTAAACTTAAGAC+AGG - chr2_1:29238315-29238334 None:intergenic 35.0%
CCTGTCTTAAGTTTAATGAC+TGG + chr2_1:29238312-29238331 Msa0204270:CDS 35.0%
!! AGACTGGTTTCCATATTTAG+TGG - chr2_1:29238343-29238362 None:intergenic 35.0%
GAACAAACTGTACCTCATTA+AGG - chr2_1:29238394-29238413 None:intergenic 35.0%
! ACAGTTTGTTCTTGTTCTTC+TGG + chr2_1:29238403-29238422 Msa0204270:intron 35.0%
! GCACATAAAGGATTTTGTTC+AGG - chr2_1:29238481-29238500 None:intergenic 35.0%
GTCATTTAACAAGATGAACC+TGG - chr2_1:29239840-29239859 None:intergenic 35.0%
TAATTCTCCGTATTGTGTTG+TGG + chr2_1:29239896-29239915 Msa0204270:intron 35.0%
TTGAGAACCACAACACAATA+CGG - chr2_1:29239906-29239925 None:intergenic 35.0%
! AATAGATCCGCAATTGATTC+TGG - chr2_1:29240007-29240026 None:intergenic 35.0%
TACGAGTGAGTTTCACACAA+AGG + chr2_1:29229226-29229245 Msa0204270:intron 40.0%
GAAAGAGTTGGCAAAAGTGA+AGG - chr2_1:29229311-29229330 None:intergenic 40.0%
ATGAAAAGTTCCTGGCAATC+CGG - chr2_1:29229520-29229539 None:intergenic 40.0%
! CATTTGGAATCGGAGTGTTA+AGG + chr2_1:29229537-29229556 Msa0204270:intron 40.0%
TCTACCACCAATCAAACACA+AGG - chr2_1:29229722-29229741 None:intergenic 40.0%
! GTTTGATTGGTGGTAGATGA+AGG + chr2_1:29229725-29229744 Msa0204270:intron 40.0%
TGGTGGTAGATGAAGGATAT+AGG + chr2_1:29229732-29229751 Msa0204270:intron 40.0%
CTGGATACCATACCAGATAA+TGG - chr2_1:29229894-29229913 None:intergenic 40.0%
GTACAATATCTCGTGCTTGA+TGG + chr2_1:29229943-29229962 Msa0204270:intron 40.0%
TCACAATTTCAGGAAGCTAC+GGG + chr2_1:29229969-29229988 Msa0204270:intron 40.0%
GTAAGGTCTTCCAAATGGAA+TGG - chr2_1:29230033-29230052 None:intergenic 40.0%
! TGAGGCACCAAGAAATTGTA+AGG - chr2_1:29230050-29230069 None:intergenic 40.0%
TGGTAGCATAGGATTGTTTG+GGG - chr2_1:29230181-29230200 None:intergenic 40.0%
GTGGTAGCATAGGATTGTTT+GGG - chr2_1:29230182-29230201 None:intergenic 40.0%
TGTGGTAGCATAGGATTGTT+TGG - chr2_1:29230183-29230202 None:intergenic 40.0%
ACAATCCTATGCTACCACAT+TGG + chr2_1:29230184-29230203 Msa0204270:CDS 40.0%
CAATCCTATGCTACCACATT+GGG + chr2_1:29230185-29230204 Msa0204270:CDS 40.0%
TGCATAGTTGTATCCCAATG+TGG - chr2_1:29230201-29230220 None:intergenic 40.0%
ACATTGGGATACAACTATGC+AGG + chr2_1:29230200-29230219 Msa0204270:CDS 40.0%
! TGCTCTGAATCAGTTTGTGA+TGG + chr2_1:29230237-29230256 Msa0204270:CDS 40.0%
!!! TGCACAGGCTTTTTCAGAAA+TGG + chr2_1:29230678-29230697 Msa0204270:CDS 40.0%
TGCTCCACCAAAAAATGATC+AGG + chr2_1:29230801-29230820 Msa0204270:CDS 40.0%
!!! CCATCCTGATCATTTTTTGG+TGG - chr2_1:29230808-29230827 None:intergenic 40.0%
CCACCAAAAAATGATCAGGA+TGG + chr2_1:29230805-29230824 Msa0204270:CDS 40.0%
ATCAGGATGGAACTTCAATG+AGG + chr2_1:29230818-29230837 Msa0204270:CDS 40.0%
GATTTCTGCTTCGTGCTTAA+AGG - chr2_1:29231098-29231117 None:intergenic 40.0%
CTCTGCCACAAATATGTGAT+AGG + chr2_1:29231540-29231559 Msa0204270:intron 40.0%
CACTGCCTATCACATATTTG+TGG - chr2_1:29231548-29231567 None:intergenic 40.0%
!! CAAGATATGCTTGGCTTTGT+TGG + chr2_1:29231722-29231741 Msa0204270:intron 40.0%
TAAGAAACAATGGTTACGCG+AGG + chr2_1:29232544-29232563 Msa0204270:intron 40.0%
TGGCTACAAAGAGAGATCAA+AGG - chr2_1:29232598-29232617 None:intergenic 40.0%
!!! TTCCCTTTTCTAGGGTTTGA+AGG - chr2_1:29233673-29233692 None:intergenic 40.0%
AAATACCACTGTGCAGTACA+TGG + chr2_1:29234163-29234182 Msa0204270:intron 40.0%
AATAAACCAACCTAGCTAGC+TGG + chr2_1:29234387-29234406 Msa0204270:intron 40.0%
AGTTATGTAACCAGCTAGCT+AGG - chr2_1:29234400-29234419 None:intergenic 40.0%
TTCCTTTATGTCTTCAGCGA+CGG + chr2_1:29234566-29234585 Msa0204270:intron 40.0%
TGTGTGTGGTTCCAAACATA+TGG - chr2_1:29234778-29234797 None:intergenic 40.0%
! TTCTTGAAAATGGCGGAAAG+GGG - chr2_1:29234915-29234934 None:intergenic 40.0%
! CTTTCTTGAAAATGGCGGAA+AGG - chr2_1:29234917-29234936 None:intergenic 40.0%
GATCGATGAGCCTTTCATAA+AGG + chr2_1:29235047-29235066 Msa0204270:intron 40.0%
CAACACCGCTAAAAACGTAA+AGG + chr2_1:29235166-29235185 Msa0204270:intron 40.0%
AATGAACACCGCAAGAAAAC+GGG + chr2_1:29235355-29235374 Msa0204270:intron 40.0%
! CTTCATTAAGGGGGTGATTT+TGG - chr2_1:29235538-29235557 None:intergenic 40.0%
CACCCCCTTAATGAAGAAAT+TGG + chr2_1:29235542-29235561 Msa0204270:intron 40.0%
CTAGAGAGAAAAAACTAGGG+CGG + chr2_1:29235575-29235594 Msa0204270:intron 40.0%
CCACTTTATAAGGAGACACA+AGG - chr2_1:29235704-29235723 None:intergenic 40.0%
CCTTGTGTCTCCTTATAAAG+TGG + chr2_1:29235701-29235720 Msa0204270:intron 40.0%
TTTCTGGGTGAAACGATTCT+TGG + chr2_1:29236127-29236146 Msa0204270:intron 40.0%
CTTCGCCACATAACATTCTT+TGG + chr2_1:29236571-29236590 Msa0204270:intron 40.0%
AGTCATTATGCAGTTGGGTT+CGG + chr2_1:29236653-29236672 Msa0204270:intron 40.0%
!!! AACGGGTTGGCAAAAGTTTT+CGG - chr2_1:29236704-29236723 None:intergenic 40.0%
ATAAAATTTGGCCAACGGGT+TGG - chr2_1:29236717-29236736 None:intergenic 40.0%
! ATGTTCTTTTCGATTAGGGC+TGG - chr2_1:29236810-29236829 None:intergenic 40.0%
AAGGAGTTCGCAAAAGTGAA+GGG - chr2_1:29236921-29236940 None:intergenic 40.0%
!! AACTCCTTCACTTTTGCTTC+TGG + chr2_1:29236933-29236952 Msa0204270:intron 40.0%
!! AAGAGTTGTTTTCAGTCAGC+AGG - chr2_1:29237092-29237111 None:intergenic 40.0%
TGTTTGATTGGTGGAAGATG+AGG + chr2_1:29237353-29237372 Msa0204270:intron 40.0%
ATTTGGCAGACTATCTGGAT+AGG - chr2_1:29237466-29237485 None:intergenic 40.0%
TGGCAGACCTTACAATATCT+TGG + chr2_1:29237598-29237617 Msa0204270:CDS 40.0%
CTATATGCAGTCTGCACATA+AGG - chr2_1:29237672-29237691 None:intergenic 40.0%
! TGTGGTAGCATAGGTTTGTT+TGG - chr2_1:29237741-29237760 None:intergenic 40.0%
ACAAACCTATGCTACCACAT+TGG + chr2_1:29237742-29237761 Msa0204270:CDS 40.0%
CAAACCTATGCTACCACATT+GGG + chr2_1:29237743-29237762 Msa0204270:CDS 40.0%
!! AACTATGCAGGTTTTTAGGC+TGG + chr2_1:29237770-29237789 Msa0204270:CDS 40.0%
CTTTGCTACACGAGGATTAT+AGG - chr2_1:29237945-29237964 None:intergenic 40.0%
CTATAATCCTCGTGTAGCAA+AGG + chr2_1:29237943-29237962 Msa0204270:CDS 40.0%
ACTGGGGAATCCACTAAATA+TGG + chr2_1:29238330-29238349 Msa0204270:CDS 40.0%
TTCGGCACCAAAACATGATA+GGG + chr2_1:29238362-29238381 Msa0204270:CDS 40.0%
! GTTCCATCCCTATCATGTTT+TGG - chr2_1:29238372-29238391 None:intergenic 40.0%
ATAGGGATGGAACCTTAATG+AGG + chr2_1:29238379-29238398 Msa0204270:CDS 40.0%
TGTAGAAAATCCATCTGGGA+TGG + chr2_1:29238935-29238954 Msa0204270:CDS 40.0%
GGTACATACATGACCATGAT+CGG + chr2_1:29239253-29239272 Msa0204270:intron 40.0%
TACCTAACATGAATGTAGCC+AGG + chr2_1:29239819-29239838 Msa0204270:intron 40.0%
AACCTGGCTACATTCATGTT+AGG - chr2_1:29239824-29239843 None:intergenic 40.0%
!! TTGTAATTTGGTGGTGGAAC+AGG + chr2_1:29239958-29239977 Msa0204270:intron 40.0%
GTATGGACCAGAATCAATTG+CGG + chr2_1:29232781-29232800 Msa0204270:intron 40.0%
CTCACTCGTAAAAATAGGGC+TGG - chr2_1:29229216-29229235 None:intergenic 45.0%
AGTTGGCAAAAGTGAAGGGA+AGG - chr2_1:29229306-29229325 None:intergenic 45.0%
GTATCCCAATGTGGTAGCAT+AGG - chr2_1:29230192-29230211 None:intergenic 45.0%
!!! CATTTTTTGGTGGAGCAGAC+TGG - chr2_1:29230798-29230817 None:intergenic 45.0%
GGAAGCAAGAGATCAACAGA+TGG + chr2_1:29230930-29230949 Msa0204270:CDS 45.0%
CGTAGAAAATCCATCTGGAC+TGG + chr2_1:29231280-29231299 Msa0204270:intron 45.0%
AAATTCTGTGCCAGTCCAGA+TGG - chr2_1:29231293-29231312 None:intergenic 45.0%
!! ATCTGGACTGGCACAGAATT+TGG + chr2_1:29231292-29231311 Msa0204270:CDS 45.0%
!! TCTGGACTGGCACAGAATTT+GGG + chr2_1:29231293-29231312 Msa0204270:CDS 45.0%
TTGCTAGAGAGCAGCTATAG+CGG - chr2_1:29231682-29231701 None:intergenic 45.0%
GCTCAGTGAGCATTTGTGTT+AGG - chr2_1:29232328-29232347 None:intergenic 45.0%
! GAAGAGCTAGTCAGGTTGTA+TGG + chr2_1:29232764-29232783 Msa0204270:intron 45.0%
GTACTTTGTGCTTTGACTGC+AGG + chr2_1:29233314-29233333 Msa0204270:intron 45.0%
! CAACAAACTTGCAGCCTTGT+TGG + chr2_1:29233409-29233428 Msa0204270:intron 45.0%
! GAAGAGCACGGTAGTAAGTT+TGG - chr2_1:29233616-29233635 None:intergenic 45.0%
TTACTACCGTGCTCTTCTCT+TGG + chr2_1:29233619-29233638 Msa0204270:intron 45.0%
TCTGTTCCAAGAGAAGAGCA+CGG - chr2_1:29233628-29233647 None:intergenic 45.0%
CTTATCCATGTACTGCACAG+TGG - chr2_1:29234171-29234190 None:intergenic 45.0%
ATGTAACCAGCTAGCTAGGT+TGG - chr2_1:29234396-29234415 None:intergenic 45.0%
GTGGTTCTCACAGTAAGTGA+TGG + chr2_1:29234542-29234561 Msa0204270:intron 45.0%
TTCCGTCGCTGAAGACATAA+AGG - chr2_1:29234571-29234590 None:intergenic 45.0%
TTATGTCTTCAGCGACGGAA+AGG + chr2_1:29234571-29234590 Msa0204270:intron 45.0%
TTGCAAAGCCTAAAACCGGT+CGG - chr2_1:29234603-29234622 None:intergenic 45.0%
TCTCTAGGTTGTGTTGTGTG+TGG - chr2_1:29234792-29234811 None:intergenic 45.0%
! TCTTGAAAATGGCGGAAAGG+GGG - chr2_1:29234914-29234933 None:intergenic 45.0%
AGATGGAGATGGGTGATTTC+AGG + chr2_1:29235500-29235519 Msa0204270:intron 45.0%
!!! CGCCCTAGTTTTTTCTCTCT+AGG - chr2_1:29235577-29235596 None:intergenic 45.0%
! GAAAACTTTTGCCAACCCGT+TGG + chr2_1:29236703-29236722 Msa0204270:intron 45.0%
TTGACCCGAATGACTCGTAA+CGG + chr2_1:29236741-29236760 Msa0204270:intron 45.0%
GAAGGAGTTCGCAAAAGTGA+AGG - chr2_1:29236922-29236941 None:intergenic 45.0%
GAGATAAACACTGGATTGCC+AGG + chr2_1:29237133-29237152 Msa0204270:intron 45.0%
! AGGACCTTTTCACGTCGAAT+GGG + chr2_1:29237153-29237172 Msa0204270:intron 45.0%
ACATCCCATTCGACGTGAAA+AGG - chr2_1:29237160-29237179 None:intergenic 45.0%
GTAAGGTCTGCCAAATGGAT+TGG - chr2_1:29237591-29237610 None:intergenic 45.0%
TGCATAGTTGTCTCCCAATG+TGG - chr2_1:29237759-29237778 None:intergenic 45.0%
ACATTGGGAGACAACTATGC+AGG + chr2_1:29237758-29237777 Msa0204270:CDS 45.0%
GTCGTAGTTTAAAAACCGGC+TGG - chr2_1:29237812-29237831 None:intergenic 45.0%
TGATGCTCTACATGATCCCA+CGG + chr2_1:29237913-29237932 Msa0204270:CDS 45.0%
CTTCGGCACCAAAACATGAT+AGG + chr2_1:29238361-29238380 Msa0204270:CDS 45.0%
GCACCAAAACATGATAGGGA+TGG + chr2_1:29238366-29238385 Msa0204270:CDS 45.0%
! CACATGAACTGCAGTTGATG+TGG + chr2_1:29238887-29238906 Msa0204270:intron 45.0%
AAATTCTGAGCCATCCCAGA+TGG - chr2_1:29238948-29238967 None:intergenic 45.0%
! ATCTGGGATGGCTCAGAATT+TGG + chr2_1:29238947-29238966 Msa0204270:CDS 45.0%
! TCTGGGATGGCTCAGAATTT+GGG + chr2_1:29238948-29238967 Msa0204270:CDS 45.0%
! ATGTTGCAATGCACCGATCA+TGG - chr2_1:29239269-29239288 None:intergenic 45.0%
GTTCAGCGAGTGTTTGTGTT+AGG - chr2_1:29239492-29239511 None:intergenic 45.0%
GAAGAGCTCGTTAAGGAGTA+TGG + chr2_1:29239980-29239999 Msa0204270:CDS 45.0%
!!! TTAATTTTTATATAAATATG+TGG + chr2_1:29230988-29231007 Msa0204270:intron 5.0%
!!! TGTATAATTTTTTTTTTATT+TGG + chr2_1:29232922-29232941 Msa0204270:intron 5.0%
!!! GTATAATTTTTTTTTTATTT+GGG + chr2_1:29232923-29232942 Msa0204270:intron 5.0%
!!! TTTTTTACTTTTATTTTTAA+AGG - chr2_1:29233588-29233607 None:intergenic 5.0%
!!! ATTTTTATTTTTATTTTTTC+AGG + chr2_1:29236466-29236485 Msa0204270:intron 5.0%
!!! TTTTATATTTTAAAAAATTC+AGG + chr2_1:29237258-29237277 Msa0204270:intron 5.0%
GGAACTCACGTCGATCAAGA+AGG - chr2_1:29229417-29229436 None:intergenic 50.0%
TCTATGAACACCGGATTGCC+AGG + chr2_1:29229507-29229526 Msa0204270:intron 50.0%
TACAAGCTTCGCGAGCTTGA+TGG + chr2_1:29229995-29230014 Msa0204270:CDS 50.0%
ACAAGCTTCGCGAGCTTGAT+GGG + chr2_1:29229996-29230015 Msa0204270:CDS 50.0%
! TTTTGGTCAGGATGCTGCAC+AGG + chr2_1:29230663-29230682 Msa0204270:intron 50.0%
AGGAGAATCCTGCCACAGAA+AGG - chr2_1:29231078-29231097 None:intergenic 50.0%
!! CTGGACTGGCACAGAATTTG+GGG + chr2_1:29231294-29231313 Msa0204270:CDS 50.0%
GAATTTGGGGACACTCGTCA+AGG + chr2_1:29231307-29231326 Msa0204270:CDS 50.0%
TACCTCTGTGCTTTGACTGC+AGG + chr2_1:29233218-29233237 Msa0204270:intron 50.0%
CTTTGTGCTTTGACTGCAGG+CGG + chr2_1:29233317-29233336 Msa0204270:intron 50.0%
! ACGGAAAGGTTTTCACCGAC+CGG + chr2_1:29234585-29234604 Msa0204270:intron 50.0%
!! GGTTTTCACCGACCGGTTTT+AGG + chr2_1:29234592-29234611 Msa0204270:intron 50.0%
! CTTGAAAATGGCGGAAAGGG+GGG - chr2_1:29234913-29234932 None:intergenic 50.0%
TGACCGGAATATCCATGCCT+CGG + chr2_1:29235273-29235292 Msa0204270:intron 50.0%
ATCCCGAGGCATGGATATTC+CGG - chr2_1:29235279-29235298 None:intergenic 50.0%
!! AAACTAGGGCGGCTTGTTGT+TGG + chr2_1:29235586-29235605 Msa0204270:intron 50.0%
TGGCCAGGTTACTTACCTCT+CGG + chr2_1:29236147-29236166 Msa0204270:intron 50.0%
!! GGGTTCGGTTTTCTTTGAGC+TGG + chr2_1:29236668-29236687 Msa0204270:intron 50.0%
TGACCCGAATGACTCGTAAC+GGG + chr2_1:29236742-29236761 Msa0204270:intron 50.0%
TTGGCCCGTTACGAGTCATT+CGG - chr2_1:29236749-29236768 None:intergenic 50.0%
CATTCGACGTGAAAAGGTCC+TGG - chr2_1:29237154-29237173 None:intergenic 50.0%
! CAGGACCTTTTCACGTCGAA+TGG + chr2_1:29237152-29237171 Msa0204270:intron 50.0%
TGCGGCGCCAAGATATTGTA+AGG - chr2_1:29237608-29237627 None:intergenic 50.0%
GTCTCCCAATGTGGTAGCAT+AGG - chr2_1:29237750-29237769 None:intergenic 50.0%
GGATTATAGGAGAGCTCCGT+GGG - chr2_1:29237932-29237951 None:intergenic 50.0%
AGGATTATAGGAGAGCTCCG+TGG - chr2_1:29237933-29237952 None:intergenic 50.0%
TGACTCACCTTTGCTACACG+AGG - chr2_1:29237953-29237972 None:intergenic 50.0%
! TTTTGGTCAGGAAGCTGCAC+AGG + chr2_1:29238224-29238243 Msa0204270:intron 50.0%
!! GAAGCTGCACAGGCTTTTTC+AGG + chr2_1:29238234-29238253 Msa0204270:CDS 50.0%
!!! CATGTTTTGGTGCCGAAGAC+TGG - chr2_1:29238359-29238378 None:intergenic 50.0%
TTGCTGCACTGCGCACATAA+AGG - chr2_1:29230908-29230927 None:intergenic 50.0%
CTGGGATGGCTCAGAATTTG+GGG + chr2_1:29238949-29238968 Msa0204270:CDS 50.0%
GAATTTGGGGACTGTCGTCA+AGG + chr2_1:29238962-29238981 Msa0204270:CDS 50.0%
GGAACAGGAAGAGCTCGTTA+AGG + chr2_1:29239973-29239992 Msa0204270:intron 50.0%
CAAGCTTCGCGAGCTTGATG+GGG + chr2_1:29229997-29230016 Msa0204270:CDS 55.0%
TATGTGCGCAGTGCAGCAAG+TGG + chr2_1:29230909-29230928 Msa0204270:intron 55.0%
!! GTGTGATTTGGTGGCGGAAC+AGG + chr2_1:29232742-29232761 Msa0204270:intron 55.0%
CGGAACAGGAAGAGCTAGTC+AGG + chr2_1:29232756-29232775 Msa0204270:intron 55.0%
TGCGTGTTTAGGTGGGTGTG+TGG - chr2_1:29234984-29235003 None:intergenic 55.0%
GACCGGAATATCCATGCCTC+GGG + chr2_1:29235274-29235293 Msa0204270:intron 55.0%
!! GCTTGTTGTTGGAGAGGGAG+AGG + chr2_1:29235597-29235616 Msa0204270:intron 55.0%
GGGTGAAACGATTCTTGGCC+AGG + chr2_1:29236132-29236151 Msa0204270:intron 55.0%
ACGCCGAGAGGTAAGTAACC+TGG - chr2_1:29236153-29236172 None:intergenic 55.0%
!! TACCAGTGGAAAAGGTGCCC+TGG - chr2_1:29236182-29236201 None:intergenic 55.0%
! GGCACCTTTTCCACTGGTAG+CGG + chr2_1:29236183-29236202 Msa0204270:intron 55.0%
!!! ACCTTTTCCACTGGTAGCGG+AGG + chr2_1:29236186-29236205 Msa0204270:intron 55.0%
ACCTCCGCTACCAGTGGAAA+AGG - chr2_1:29236190-29236209 None:intergenic 55.0%
GTGTTAACCTCCGCTACCAG+TGG - chr2_1:29236196-29236215 None:intergenic 55.0%
TGGCCCGTTACGAGTCATTC+GGG - chr2_1:29236748-29236767 None:intergenic 55.0%
!! TCGTAACGGGCCAAGCAGTT+TGG + chr2_1:29236755-29236774 Msa0204270:intron 55.0%
!! CGTAACGGGCCAAGCAGTTT+GGG + chr2_1:29236756-29236775 Msa0204270:intron 55.0%
CCAAGCAGTTTGGGTGGCTT+GGG + chr2_1:29236765-29236784 Msa0204270:intron 55.0%
TATGTGCGCAGTGCAGCAAG+TGG + chr2_1:29230909-29230928 Msa0204270:intron 55.0%
GGCCTGCAGTCAAAGCACAG+AGG - chr2_1:29233223-29233242 None:intergenic 60.0%
ACGTTGCAGATCCCGAGGCA+TGG - chr2_1:29235288-29235307 None:intergenic 60.0%
CGTCAACGTTGCAGATCCCG+AGG - chr2_1:29235293-29235312 None:intergenic 60.0%
!! AGGGCGGCTTGTTGTTGGAG+AGG + chr2_1:29235591-29235610 Msa0204270:intron 60.0%
!! GGGCGGCTTGTTGTTGGAGA+GGG + chr2_1:29235592-29235611 Msa0204270:intron 60.0%
ACCTCTCGGCGTAACTCACC+AGG + chr2_1:29236161-29236180 Msa0204270:intron 60.0%
CCTCTCGGCGTAACTCACCA+GGG + chr2_1:29236162-29236181 Msa0204270:intron 60.0%
!! CACCAGGGCACCTTTTCCAC+TGG + chr2_1:29236177-29236196 Msa0204270:intron 60.0%
AACGGGCCAAGCAGTTTGGG+TGG + chr2_1:29236759-29236778 Msa0204270:intron 60.0%
GCCAAGCAGTTTGGGTGGCT+TGG + chr2_1:29236764-29236783 Msa0204270:intron 60.0%
CCCAAGCCACCCAAACTGCT+TGG - chr2_1:29236768-29236787 None:intergenic 60.0%
CCCTGGTGAGTTACGCCGAG+AGG - chr2_1:29236165-29236184 None:intergenic 65.0%
! GCAGTTTGGGTGGCTTGGGC+TGG + chr2_1:29236769-29236788 Msa0204270:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 29229196 29240045 29229196 ID=Msa0204270;Name=Msa0204270
chr2_1 mRNA 29229196 29240045 29229196 ID=Msa0204270-mRNA-1;Parent=Msa0204270;Name=Msa0204270-mRNA-1;_AED=0.22;_eAED=0.23;_QI=0|0|0|0.94|0.88|0.89|19|0|559
chr2_1 exon 29229196 29229204 29229196 ID=Msa0204270-mRNA-1:exon:10502;Parent=Msa0204270-mRNA-1
chr2_1 exon 29229981 29230073 29229981 ID=Msa0204270-mRNA-1:exon:10503;Parent=Msa0204270-mRNA-1
chr2_1 exon 29230174 29230272 29230174 ID=Msa0204270-mRNA-1:exon:10504;Parent=Msa0204270-mRNA-1
chr2_1 exon 29230673 29230839 29230673 ID=Msa0204270-mRNA-1:exon:10505;Parent=Msa0204270-mRNA-1
chr2_1 exon 29230920 29230974 29230920 ID=Msa0204270-mRNA-1:exon:10506;Parent=Msa0204270-mRNA-1
chr2_1 exon 29231089 29231137 29231089 ID=Msa0204270-mRNA-1:exon:10507;Parent=Msa0204270-mRNA-1
chr2_1 exon 29231285 29231373 29231285 ID=Msa0204270-mRNA-1:exon:10508;Parent=Msa0204270-mRNA-1
chr2_1 exon 29231998 29232075 29231998 ID=Msa0204270-mRNA-1:exon:10509;Parent=Msa0204270-mRNA-1
chr2_1 exon 29232269 29232394 29232269 ID=Msa0204270-mRNA-1:exon:10510;Parent=Msa0204270-mRNA-1
chr2_1 exon 29237545 29237631 29237545 ID=Msa0204270-mRNA-1:exon:10511;Parent=Msa0204270-mRNA-1
chr2_1 exon 29237732 29237815 29237732 ID=Msa0204270-mRNA-1:exon:10512;Parent=Msa0204270-mRNA-1
chr2_1 exon 29237890 29237964 29237890 ID=Msa0204270-mRNA-1:exon:10513;Parent=Msa0204270-mRNA-1
chr2_1 exon 29238234 29238400 29238234 ID=Msa0204270-mRNA-1:exon:10514;Parent=Msa0204270-mRNA-1
chr2_1 exon 29238505 29238559 29238505 ID=Msa0204270-mRNA-1:exon:10515;Parent=Msa0204270-mRNA-1
chr2_1 exon 29238741 29238789 29238741 ID=Msa0204270-mRNA-1:exon:10516;Parent=Msa0204270-mRNA-1
chr2_1 exon 29238901 29239028 29238901 ID=Msa0204270-mRNA-1:exon:10517;Parent=Msa0204270-mRNA-1
chr2_1 exon 29239176 29239253 29239176 ID=Msa0204270-mRNA-1:exon:10518;Parent=Msa0204270-mRNA-1
chr2_1 exon 29239433 29239558 29239433 ID=Msa0204270-mRNA-1:exon:10519;Parent=Msa0204270-mRNA-1
chr2_1 exon 29239980 29240045 29239980 ID=Msa0204270-mRNA-1:exon:10520;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29229196 29229204 29229196 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29229981 29230073 29229981 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29230174 29230272 29230174 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29230673 29230839 29230673 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29230920 29230974 29230920 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29231089 29231137 29231089 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29231285 29231373 29231285 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29231998 29232075 29231998 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29232269 29232394 29232269 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29237545 29237631 29237545 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29237732 29237815 29237732 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29237890 29237964 29237890 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29238234 29238400 29238234 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29238505 29238559 29238505 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29238741 29238789 29238741 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29238901 29239028 29238901 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29239176 29239253 29239176 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29239433 29239558 29239433 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
chr2_1 CDS 29239980 29240045 29239980 ID=Msa0204270-mRNA-1:cds;Parent=Msa0204270-mRNA-1
Gene Sequence

>Msa0204270

ATGCACTATGAAGCTACGGGATTTACAAGCTTCGCGAGCTTGATGGGGAAGAAAGAATCCATTCCATTTGGAAGACCTTACAATTTCTTGGTGCCTCAAGATCAGTCCCCAAACAATCCTATGCTACCACATTGGGATACAACTATGCAGGTGCAAAACATTTTCTGCTCTGAATCAGTTTGTGATGGTATCTTTGGTCTTGATGCTGCACAGGCTTTTTCAGAAATGGTACACAGAAGAAACCCTGATTTCAACAAATTATTTGCTGGAAACTCAAAGCCTGATGTAAGTTTAATGACTGGCGAATCAAGAGAACATGCAAACCAGTCTGCTCCACCAAAAAATGATCAGGATGGAACTTCAATGAGTGCAGCAAGTGGAAGCAAGAGATCAACAGATGGAGATCACGATGATAGTAACAAAGATTCTCCTTTAAGCACGAAGCAGAAATCTAACATGATTACTGAGGATGAAAATCCATCTGGACTGGCACAGAATTTGGGGACACTCGTCAAGGAATCTGACACTGACGTTGATGTTGATGCTAAACTAAAAAATATGGAAGATGATGAAAGAAGAAAAGAAAGAAAAAGGCTGTCAAACAGGAAATCAGCTAAAAGATCAAAGATAAAGAAACAGAAAGAATATGAAGAACAATGTCAAAAGATAAACACTCTTAAGGATGAAAATTCGGTCCTAACACAAATGCTCACTGAGCTTTCAGAGAAATGTCTCGAGCTCACCAATGAAAACGATTCTATTGAGGAAGCTACGGTATTCACAAGTTTCTCTATGGGGAAGAAAGAATCCAATCCATTTGGCAGACCTTACAATATCTTGGCGCCGCAAGATCAAACTCCAAACAAACCTATGCTACCACATTGGGAGACAACTATGCAGGTTTTTAGGCTGGTTTTCATATATTATGGCCAGCCGGCAAATAAAGCACTACTTCAATGTGATGCTCTACATGATCCCACGGAGCTCTCCTATAATCCTCGTGTAGCAAAGGAAGCTGCACAGGCTTTTTCAGGAATTGTGCGTGAAAGAAACCCAGATTTCAACATATTAGGTACTATAAACTCAGAGCCTGTCTTAAGTTTAATGACTGGGGAATCCACTAAATATGGAAACCAGTCTTCGGCACCAAAACATGATAGGGATGGAACCTTAATGAGTGCAGCAAGTGGAAGCAAGAGATCAACAGATGCAGATCAAGATGATAGTAACAATGATTCTCCTTTAAGTATGAAGAAGATATCTAACATGATTATTGGTGATGTTGATGTGGCTAACAGTCTCGCACCTTGTTACTTTGTAGAAAATCCATCTGGGATGGCTCAGAATTTGGGGACTGTCGTCAAGGAATCAGACACTGACATTGATGTTGATGCTCAACTAAAAAATATGGAAGTTGATGAAATAAGAAAAGAAAGAAAAAGACTGTCAAACAGGAAATCAGCTCAAAGATCAAAGATAAAGAAACAGAAAGAATATGAAGAGCAATGTCAAAAGATAAACACTCTTAAGGATGAAAATTTGGTCCTAACACAAACACTCGCTGAACTTTCAGAGAAATGTCTCGAGCTCACCAATGAAAACGATTCTATTGAGGAAGAGCTCGTTAAGGAGTATGGACCAGAATCAATTGCGGATCTATTGCATATGAATCCTACTTGA

Protein sequence

>Msa0204270

MHYEATGFTSFASLMGKKESIPFGRPYNFLVPQDQSPNNPMLPHWDTTMQVQNIFCSESVCDGIFGLDAAQAFSEMVHRRNPDFNKLFAGNSKPDVSLMTGESREHANQSAPPKNDQDGTSMSAASGSKRSTDGDHDDSNKDSPLSTKQKSNMITEDENPSGLAQNLGTLVKESDTDVDVDAKLKNMEDDERRKERKRLSNRKSAKRSKIKKQKEYEEQCQKINTLKDENSVLTQMLTELSEKCLELTNENDSIEEATVFTSFSMGKKESNPFGRPYNILAPQDQTPNKPMLPHWETTMQVFRLVFIYYGQPANKALLQCDALHDPTELSYNPRVAKEAAQAFSGIVRERNPDFNILGTINSEPVLSLMTGESTKYGNQSSAPKHDRDGTLMSAASGSKRSTDADQDDSNNDSPLSMKKISNMIIGDVDVANSLAPCYFVENPSGMAQNLGTVVKESDTDIDVDAQLKNMEVDEIRKERKRLSNRKSAQRSKIKKQKEYEEQCQKINTLKDENLVLTQTLAELSEKCLELTNENDSIEEELVKEYGPESIADLLHMNPT*