AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0205060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0205060 MtrunA17_Chr2g0303181 94.964 139 7 0 9 147 35 173 3.22e-94 270
Msa0205060 MtrunA17_Chr8g0381011 73.050 141 32 1 13 147 36 176 3.52e-69 206
Msa0205060 MtrunA17_Chr4g0054701 62.338 77 29 0 13 89 65 141 3.03e-31 109
Msa0205060 MtrunA17_Chr4g0047341 44.737 76 42 0 18 93 40 115 1.07e-22 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0205060 AT4G20380.2 62.937 143 41 3 17 147 47 189 1.53e-49 157
Msa0205060 AT4G20380.7 62.937 143 41 3 17 147 47 189 1.53e-49 157
Msa0205060 AT4G20380.6 62.937 143 41 3 17 147 42 184 1.90e-49 157
Msa0205060 AT4G20380.3 62.937 143 41 3 17 147 42 184 1.90e-49 157
Msa0205060 AT4G20380.4 62.937 143 41 3 17 147 42 184 1.90e-49 157
Msa0205060 AT4G20380.1 62.937 143 41 3 17 147 42 184 1.90e-49 157
Msa0205060 AT4G20380.5 62.937 143 41 3 17 147 42 184 1.90e-49 157
Msa0205060 AT4G20380.8 53.254 169 41 3 17 147 42 210 7.53e-46 149
Msa0205060 AT4G20380.8 58.209 67 25 1 20 83 4 70 8.07e-18 76.6
Msa0205060 AT1G32540.1 61.842 76 29 0 13 88 99 174 3.03e-30 108
Msa0205060 AT1G32540.3 61.039 77 30 0 13 89 66 142 5.66e-30 106
Msa0205060 AT1G32540.2 61.039 77 30 0 13 89 66 142 5.66e-30 106
Msa0205060 AT1G32540.5 62.162 74 28 0 13 86 66 139 3.09e-29 105
Msa0205060 AT4G20380.9 60.241 83 24 2 17 90 42 124 1.26e-28 102
Msa0205060 AT4G21610.1 47.500 80 42 0 17 96 57 136 5.53e-25 94.0
Msa0205060 AT4G21610.2 45.946 74 40 0 17 90 57 130 3.52e-21 84.0
Msa0205060 AT1G32540.7 44.578 83 43 2 2 83 51 131 8.32e-16 70.1
Msa0205060 AT1G32540.7 65.000 40 14 0 13 52 99 138 1.92e-12 61.2
Msa0205060 AT1G32540.4 50.000 68 33 1 19 85 33 100 4.12e-15 67.4
Msa0205060 AT1G32540.4 70.270 37 11 0 13 49 66 102 3.21e-12 59.7
Msa0205060 AT1G32540.6 50.000 68 33 1 19 85 33 100 4.12e-15 67.4
Msa0205060 AT1G32540.6 70.270 37 11 0 13 49 66 102 3.21e-12 59.7

Find 74 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTCTGATCCAAATT+AGG 0.175732 2_1:+31303875 Msa0205060:five_prime_UTR
CCAACCTCTAGATCCTAATT+TGG 0.194434 2_1:-31303888 None:intergenic
ATGCATCCCTTGTTAATAAT+TGG 0.195757 2_1:-31303967 None:intergenic
TTAAATTGAAAACTCCTTCT+TGG 0.208802 2_1:+31303764 Msa0205060:five_prime_UTR
CGTTGATTCAAGTGGGAAAT+TGG 0.251370 2_1:+31307375 Msa0205060:CDS
GATTTAAACTATAAACTAAA+TGG 0.262273 2_1:+31304052 Msa0205060:exon
GGACTAATAACGATCAATAT+AGG 0.299526 2_1:-31303925 None:intergenic
TCGGAGCTGGTTGTTTCATT+AGG 0.307392 2_1:-31307177 None:intergenic
AAACTCCTTCTTGGAATAAT+CGG 0.332582 2_1:+31303773 Msa0205060:five_prime_UTR
TCAAAATGAACCTATCGATT+TGG 0.342668 2_1:-31308143 None:intergenic
GACTTCAATTCAATCATTGC+AGG 0.349327 2_1:-31307984 None:intergenic
GACTAATAACGATCAATATA+GGG 0.362402 2_1:-31303924 None:intergenic
TCTAGACTCTTCTCCGTTCA+AGG 0.370289 2_1:+31308005 Msa0205060:three_prime_UTR
GGCAGTTCCCACAACGGATA+TGG 0.376956 2_1:-31306395 None:intergenic
TTGTCTCGAATTACAAGTCC+TGG 0.425475 2_1:+31308168 Msa0205060:three_prime_UTR
TCCATTCCTGCAGGCACATC+AGG 0.426300 2_1:-31304098 None:intergenic
CTGATGCTTTAAAACGTTGT+TGG 0.430969 2_1:+31307944 Msa0205060:three_prime_UTR
AGAAGATACCGTTTCGGAGC+TGG 0.444161 2_1:-31307190 None:intergenic
AAACAATTATAGATATTCAA+TGG 0.445337 2_1:+31308288 Msa0205060:three_prime_UTR
GGCTAAATAGACTATAGATA+TGG 0.453673 2_1:-31303946 None:intergenic
CCACTTGAATCAACGGACAT+AGG 0.456065 2_1:-31307367 None:intergenic
CAGGTAAGCAATGTTGTTGT+GGG 0.474114 2_1:+31307896 Msa0205060:intron
AGGAGTTGGCGGCCTTCCAT+TGG 0.478744 2_1:-31307145 None:intergenic
GATCTAGAGGTTGGTAAAGA+TGG 0.484640 2_1:+31303897 Msa0205060:five_prime_UTR
TAAACTAAATGGTTACATCC+AGG 0.487862 2_1:+31304063 Msa0205060:exon
TCCTGATGTGCCTGCAGGAA+TGG 0.488004 2_1:+31304097 Msa0205060:CDS
ATATCCGTTGTGGGAACTGC+CGG 0.504182 2_1:+31306397 Msa0205060:CDS
TGCAGTAGAAGATACCGTTT+CGG 0.505298 2_1:-31307196 None:intergenic
AAATTTCCTGATGTGCCTGC+AGG 0.517994 2_1:+31304092 Msa0205060:CDS
AAATGAACCATATCCGTTGT+GGG 0.521367 2_1:+31306388 Msa0205060:CDS
GTTTCATTAGGTGTCAGTAC+AGG 0.522934 2_1:-31307165 None:intergenic
TGTGACATTTCCATTCCTGC+AGG 0.523355 2_1:-31304107 None:intergenic
CAATTTCCCACTTGAATCAA+CGG 0.526156 2_1:-31307374 None:intergenic
TCCATGCGTTTATGTATTGA+AGG 0.527279 2_1:+31303815 Msa0205060:five_prime_UTR
AAATCAATTTAAACCTTGAA+CGG 0.528512 2_1:-31308018 None:intergenic
GTATTTATATGCATTATACA+AGG 0.538109 2_1:+31308044 Msa0205060:three_prime_UTR
GAGGATACATGAGTGTTGTC+CGG 0.538194 2_1:-31306416 None:intergenic
CCAAATTAGGATCTAGAGGT+TGG 0.541970 2_1:+31303888 Msa0205060:five_prime_UTR
GAAATGTCACAACTTTATTG+TGG 0.542581 2_1:+31304119 Msa0205060:CDS
CAAATGAACCATATCCGTTG+TGG 0.547355 2_1:+31306387 Msa0205060:CDS
TGAAACAACCAGCTCCGAAA+CGG 0.550490 2_1:+31307182 Msa0205060:CDS
ACAGGTAAGCAATGTTGTTG+TGG 0.554197 2_1:+31307895 Msa0205060:intron
TATTTAGCCAATTATTAACA+AGG 0.555853 2_1:+31303960 Msa0205060:five_prime_UTR
CGAATTACAAGTCCTGGATG+TGG 0.558615 2_1:+31308174 Msa0205060:three_prime_UTR
AAGATTTATAGTGTTACAGC+AGG 0.559794 2_1:-31304195 None:intergenic
AACACTATAAATCTTGTGCC+AGG 0.563885 2_1:+31304203 Msa0205060:CDS
TTAGGTGTCAGTACAGGAGT+TGG 0.564205 2_1:-31307159 None:intergenic
GCATCTACATCCAAATCGAT+AGG 0.575581 2_1:+31308133 Msa0205060:three_prime_UTR
GGTGTCAGTACAGGAGTTGG+CGG 0.576256 2_1:-31307156 None:intergenic
AAACTAAATGGTTACATCCA+GGG 0.578261 2_1:+31304064 Msa0205060:exon
ACAACACTCATGTATCCTCA+TGG 0.578970 2_1:+31306420 Msa0205060:CDS
ACCTTCAATACATAAACGCA+TGG 0.581750 2_1:-31303816 None:intergenic
ATGTCACAACTTTATTGTGG+AGG 0.583864 2_1:+31304122 Msa0205060:CDS
TGCGTTTATGTATTGAAGGT+AGG 0.590223 2_1:+31303819 Msa0205060:five_prime_UTR
TAAACATCAAAACCACATCC+AGG 0.597164 2_1:-31308186 None:intergenic
TGGATCCGATTATTCCAAGA+AGG 0.599935 2_1:-31303778 None:intergenic
TGATCCAAATTAGGATCTAG+AGG 0.603492 2_1:+31303884 Msa0205060:five_prime_UTR
TGTTGGTTTATGTGATGTTG+AGG 0.613608 2_1:+31307961 Msa0205060:three_prime_UTR
TCCTGTAGATGACCAATGGA+AGG 0.615310 2_1:+31307133 Msa0205060:intron
CCTATGTCCGTTGATTCAAG+TGG 0.615696 2_1:+31307367 Msa0205060:CDS
ATTTAGCCAATTATTAACAA+GGG 0.618703 2_1:+31303961 Msa0205060:five_prime_UTR
TTGGATGTAGATGCGAAATG+AGG 0.619627 2_1:-31308124 None:intergenic
CATGGACACACATACGTGTG+TGG 0.626632 2_1:-31303798 None:intergenic
CTATGTCCGTTGATTCAAGT+GGG 0.636368 2_1:+31307368 Msa0205060:CDS
CAAACTGCACATTTGACTGA+AGG 0.636685 2_1:-31306447 None:intergenic
ATTGTCCTGTAGATGACCAA+TGG 0.647818 2_1:+31307129 Msa0205060:intron
ACAGTTTGGCTCTCAAAGTG+AGG 0.651282 2_1:-31307331 None:intergenic
ACATTGCTAATGCACGCACG+TGG 0.683036 2_1:+31304152 Msa0205060:CDS
TTGTCCGGCAGTTCCCACAA+CGG 0.690082 2_1:-31306401 None:intergenic
GTTACAGCAGGAACATCTCA+CGG 0.690666 2_1:-31304183 None:intergenic
GACTTGGTAAGCATGATCAG+TGG 0.699715 2_1:+31308218 Msa0205060:three_prime_UTR
TTGTGGGCGTTACAACAGAG+AGG 0.708635 2_1:+31307912 Msa0205060:CDS
TTGACTGAAGGAGCTCCATG+AGG 0.723404 2_1:-31306435 None:intergenic
GCATGATCAGTGGATCGATG+TGG 0.752002 2_1:+31308228 Msa0205060:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTGTTAGTTT+TGG + chr2_1:31307411-31307430 Msa0205060:intron 10.0%
!!! AAAACTATAAAATATTTTAC+AGG + chr2_1:31307744-31307763 Msa0205060:intron 10.0%
!! GATTTAAACTATAAACTAAA+TGG + chr2_1:31304052-31304071 Msa0205060:exon 15.0%
!! ATTATAATTATATATCACCA+AGG + chr2_1:31304828-31304847 Msa0205060:intron 15.0%
!! TTCAAAATAATATCAAATTG+TGG - chr2_1:31305481-31305500 None:intergenic 15.0%
!!! TTTAAAACTAATCTGAATTT+CGG - chr2_1:31306101-31306120 None:intergenic 15.0%
!!! CATTACTTCAAATATATTTT+AGG + chr2_1:31306947-31306966 Msa0205060:intron 15.0%
!!! ATCAAAGTTTTTTTTTTTCA+GGG - chr2_1:31307499-31307518 None:intergenic 15.0%
!!! AATCAAAGTTTTTTTTTTTC+AGG - chr2_1:31307500-31307519 None:intergenic 15.0%
!!! AAAATATGAAATTACTGATT+TGG - chr2_1:31307715-31307734 None:intergenic 15.0%
!! AAACAATTATAGATATTCAA+TGG + chr2_1:31308288-31308307 Msa0205060:three_prime_UTR 15.0%
!! TATTTAGCCAATTATTAACA+AGG + chr2_1:31303960-31303979 Msa0205060:five_prime_UTR 20.0%
!! ATTTAGCCAATTATTAACAA+GGG + chr2_1:31303961-31303980 Msa0205060:five_prime_UTR 20.0%
!! TTGTAAATATATATCATACC+TGG - chr2_1:31304224-31304243 None:intergenic 20.0%
!! TATAAATTAAGTGTATACCA+GGG - chr2_1:31304355-31304374 None:intergenic 20.0%
!! TTATAAATTAAGTGTATACC+AGG - chr2_1:31304356-31304375 None:intergenic 20.0%
!!! AAACATATTAAGCTTTTAGA+AGG - chr2_1:31304711-31304730 None:intergenic 20.0%
!!! TTCTAAAAGCTTAATATGTT+TGG + chr2_1:31304710-31304729 Msa0205060:intron 20.0%
!! TTAACTACAAAAATATTGCA+TGG - chr2_1:31304927-31304946 None:intergenic 20.0%
!!! ACAAAAATTATTGAGTTGAA+TGG - chr2_1:31305234-31305253 None:intergenic 20.0%
!!! AAGCAAAGAATTTTTTTTTC+TGG + chr2_1:31305787-31305806 Msa0205060:intron 20.0%
!!! AGCAAAGAATTTTTTTTTCT+GGG + chr2_1:31305788-31305807 Msa0205060:intron 20.0%
!! TTGATTAGGAAAAAAATCAT+AGG - chr2_1:31305997-31306016 None:intergenic 20.0%
!!! GTTTTTGTAGTTTATAGATA+AGG - chr2_1:31306041-31306060 None:intergenic 20.0%
!! TTAAAACTAATCTGAATTTC+GGG - chr2_1:31306100-31306119 None:intergenic 20.0%
!! CATTTGATTAGAATCTTTAA+AGG - chr2_1:31306373-31306392 None:intergenic 20.0%
!! TATCAAAATAGAATCTTGAT+TGG - chr2_1:31306615-31306634 None:intergenic 20.0%
!! GTTGAAAATCAGAAAATAAT+TGG + chr2_1:31306722-31306741 Msa0205060:intron 20.0%
!! ATATTTAAGAAAAGAAAGAC+AGG + chr2_1:31306826-31306845 Msa0205060:intron 20.0%
!! TATAAAAGCTTGATATAGAT+GGG + chr2_1:31306864-31306883 Msa0205060:intron 20.0%
!!! TCAAATATATTTTAGGATTC+TGG + chr2_1:31306954-31306973 Msa0205060:intron 20.0%
!! CAAAATTCACTTATTCTATA+GGG - chr2_1:31307467-31307486 None:intergenic 20.0%
!!! TCAAAGTTTTTTTTTTTCAG+GGG - chr2_1:31307498-31307517 None:intergenic 20.0%
!! ATAGTCATCTCATATTATAA+AGG - chr2_1:31307529-31307548 None:intergenic 20.0%
!!! TAATATGAGATGACTATTTT+TGG + chr2_1:31307532-31307551 Msa0205060:intron 20.0%
!!! TTAATTTTAAGAATGTGAAC+TGG + chr2_1:31307871-31307890 Msa0205060:intron 20.0%
!! AAATCAATTTAAACCTTGAA+CGG - chr2_1:31308021-31308040 None:intergenic 20.0%
!! GTATTTATATGCATTATACA+AGG + chr2_1:31308044-31308063 Msa0205060:three_prime_UTR 20.0%
!! AATTAAAAAAAGGACAAGAT+TGG - chr2_1:31308329-31308348 None:intergenic 20.0%
! TTAAATTGAAAACTCCTTCT+TGG + chr2_1:31303764-31303783 Msa0205060:five_prime_UTR 25.0%
! GACTAATAACGATCAATATA+GGG - chr2_1:31303927-31303946 None:intergenic 25.0%
!! GAACAAGTGAATTTTTAATC+TGG - chr2_1:31304029-31304048 None:intergenic 25.0%
! AAATACACTTAATTCATCGA+TGG + chr2_1:31304320-31304339 Msa0205060:intron 25.0%
! TCAGAAGATATTACGTTAAA+TGG - chr2_1:31304783-31304802 None:intergenic 25.0%
! AATATCTTCTGATTATTCCA+AGG + chr2_1:31304791-31304810 Msa0205060:intron 25.0%
! AATTAAAATTATGCTGTCCT+TGG - chr2_1:31304811-31304830 None:intergenic 25.0%
!! TCAACTCAATAATTTTTGTC+CGG + chr2_1:31305235-31305254 Msa0205060:intron 25.0%
! GAATGATATTATGATAGTAC+TGG + chr2_1:31305564-31305583 Msa0205060:intron 25.0%
!!! GCAAAGAATTTTTTTTTCTG+GGG + chr2_1:31305789-31305808 Msa0205060:intron 25.0%
! GCTTATTCGTTAAAAAGAAA+TGG - chr2_1:31305923-31305942 None:intergenic 25.0%
! ACAAAAACAAGATAGAATCT+TGG + chr2_1:31306053-31306072 Msa0205060:intron 25.0%
! AAAATTTACGTGTAAACTTC+AGG + chr2_1:31306217-31306236 Msa0205060:intron 25.0%
! ATATCCATAGATGAAGAAAA+TGG - chr2_1:31306278-31306297 None:intergenic 25.0%
! GTAAATTAATTCTGTTGATC+TGG + chr2_1:31306557-31306576 Msa0205060:intron 25.0%
! CTATAAAAGCTTGATATAGA+TGG + chr2_1:31306863-31306882 Msa0205060:intron 25.0%
! AAAATGCAAAATGTTGACAA+CGG - chr2_1:31307067-31307086 None:intergenic 25.0%
!! TCAACATTTTGCATTTTATG+TGG + chr2_1:31307070-31307089 Msa0205060:intron 25.0%
!!! CTATACTTTTGACTTTCTTT+TGG + chr2_1:31307222-31307241 Msa0205060:intron 25.0%
! CCAAAATTCACTTATTCTAT+AGG - chr2_1:31307468-31307487 None:intergenic 25.0%
!! CCTATAGAATAAGTGAATTT+TGG + chr2_1:31307465-31307484 Msa0205060:intron 25.0%
!!! TGGTTTTGATGTTTATGTTT+TGG + chr2_1:31308194-31308213 Msa0205060:three_prime_UTR 25.0%
AAACTCCTTCTTGGAATAAT+CGG + chr2_1:31303773-31303792 Msa0205060:five_prime_UTR 30.0%
GGACTAATAACGATCAATAT+AGG - chr2_1:31303928-31303947 None:intergenic 30.0%
GGCTAAATAGACTATAGATA+TGG - chr2_1:31303949-31303968 None:intergenic 30.0%
ATGCATCCCTTGTTAATAAT+TGG - chr2_1:31303970-31303989 None:intergenic 30.0%
TAAACTAAATGGTTACATCC+AGG + chr2_1:31304063-31304082 Msa0205060:exon 30.0%
AAACTAAATGGTTACATCCA+GGG + chr2_1:31304064-31304083 Msa0205060:exon 30.0%
GAAATGTCACAACTTTATTG+TGG + chr2_1:31304119-31304138 Msa0205060:CDS 30.0%
AAGATTTATAGTGTTACAGC+AGG - chr2_1:31304198-31304217 None:intergenic 30.0%
GAGTATGATGTACATATAGT+TGG - chr2_1:31304455-31304474 None:intergenic 30.0%
GCTAAACAGTACAATATTTG+TGG - chr2_1:31304516-31304535 None:intergenic 30.0%
AATATTGTACTGTTTAGCGA+AGG + chr2_1:31304518-31304537 Msa0205060:intron 30.0%
TTCACTTTCATTCAGAAGAA+TGG + chr2_1:31304622-31304641 Msa0205060:intron 30.0%
TCACTTTCATTCAGAAGAAT+GGG + chr2_1:31304623-31304642 Msa0205060:intron 30.0%
TCAAATTATCTTTCCCAACA+TGG + chr2_1:31304878-31304897 Msa0205060:intron 30.0%
CATACACAATCAAATAGATG+AGG - chr2_1:31305545-31305564 None:intergenic 30.0%
TTGGAATTGAAACAGATCAA+GGG - chr2_1:31305644-31305663 None:intergenic 30.0%
TTCGTTAAAAAGAAATGGAG+AGG - chr2_1:31305918-31305937 None:intergenic 30.0%
! CTTTTTAACGAATAAGCAGT+TGG + chr2_1:31305926-31305945 Msa0205060:intron 30.0%
TTAGGAAAAAAATCATAGGC+TGG - chr2_1:31305993-31306012 None:intergenic 30.0%
AGATAGAATCTTGGTTCATT+TGG + chr2_1:31306062-31306081 Msa0205060:intron 30.0%
! AGTTCCATTTTCTTCATCTA+TGG + chr2_1:31306271-31306290 Msa0205060:intron 30.0%
!! GTTGTTTACTGACTTATTGT+TGG + chr2_1:31306342-31306361 Msa0205060:intron 30.0%
! GCTAAAGATTTTAGACTGAT+TGG + chr2_1:31306643-31306662 Msa0205060:intron 30.0%
ACTGATTGGATTTGAAGAAT+AGG + chr2_1:31306657-31306676 Msa0205060:intron 30.0%
!! TCAGATTACGTCATTTTGTT+CGG + chr2_1:31306745-31306764 Msa0205060:intron 30.0%
! GATTTTCTACTACTACAGTT+TGG - chr2_1:31307348-31307367 None:intergenic 30.0%
!!! GAATAAGTGAATTTTGGTTC+TGG + chr2_1:31307471-31307490 Msa0205060:intron 30.0%
! GGGAAGAAAGAATTCATTTT+AGG - chr2_1:31307674-31307693 None:intergenic 30.0%
AGGATATGGTAACTATACAA+TGG - chr2_1:31307788-31307807 None:intergenic 30.0%
! TCAAAATGAACCTATCGATT+TGG - chr2_1:31308146-31308165 None:intergenic 30.0%
!!! ATGTTTATGTTTTGGTGACT+TGG + chr2_1:31308202-31308221 Msa0205060:three_prime_UTR 30.0%
TCCATGCGTTTATGTATTGA+AGG + chr2_1:31303815-31303834 Msa0205060:five_prime_UTR 35.0%
ACCTTCAATACATAAACGCA+TGG - chr2_1:31303819-31303838 None:intergenic 35.0%
TGCGTTTATGTATTGAAGGT+AGG + chr2_1:31303819-31303838 Msa0205060:five_prime_UTR 35.0%
CTTCTTGTCTGATCCAAATT+AGG + chr2_1:31303875-31303894 Msa0205060:five_prime_UTR 35.0%
TGATCCAAATTAGGATCTAG+AGG + chr2_1:31303884-31303903 Msa0205060:five_prime_UTR 35.0%
! ATCAGGAAATTTTAGATCCC+TGG - chr2_1:31304084-31304103 None:intergenic 35.0%
ATGTCACAACTTTATTGTGG+AGG + chr2_1:31304122-31304141 Msa0205060:CDS 35.0%
AACACTATAAATCTTGTGCC+AGG + chr2_1:31304203-31304222 Msa0205060:CDS 35.0%
ATTAAGTGTATACCAGGGTT+TGG - chr2_1:31304350-31304369 None:intergenic 35.0%
GTACAATATTTGTGGAGAGT+AGG - chr2_1:31304508-31304527 None:intergenic 35.0%
! AAAAAGGGTTGACTTTCGAT+TGG + chr2_1:31304649-31304668 Msa0205060:intron 35.0%
TTATATATCACCAAGGTGTG+TGG + chr2_1:31304835-31304854 Msa0205060:intron 35.0%
ATCTTTCCCAACATGGTATT+CGG + chr2_1:31304885-31304904 Msa0205060:intron 35.0%
AGGATATTAAGGATGACAGT+GGG - chr2_1:31305089-31305108 None:intergenic 35.0%
AAGGATATTAAGGATGACAG+TGG - chr2_1:31305090-31305109 None:intergenic 35.0%
!!! ATTTTTGTCCGGCCTTATTT+AGG + chr2_1:31305246-31305265 Msa0205060:intron 35.0%
! AAACTTCCAAGGTATCAAAG+TGG - chr2_1:31305300-31305319 None:intergenic 35.0%
! TACCTTGGAAGTTTCACTTT+TGG + chr2_1:31305306-31305325 Msa0205060:intron 35.0%
!! ACCTTGGAAGTTTCACTTTT+GGG + chr2_1:31305307-31305326 Msa0205060:intron 35.0%
! GGTTTTTGTACACACAATGA+TGG + chr2_1:31305328-31305347 Msa0205060:intron 35.0%
ACTCGGGGATACAAAAAATT+AGG - chr2_1:31305400-31305419 None:intergenic 35.0%
TTTGATGCCATATAAGGACT+CGG - chr2_1:31305417-31305436 None:intergenic 35.0%
AGACTGTTTGATGCCATATA+AGG - chr2_1:31305423-31305442 None:intergenic 35.0%
TCAAACAGTCTCTTCAAGAA+TGG + chr2_1:31305432-31305451 Msa0205060:intron 35.0%
GGAATAACAAACTGAACCTA+TGG - chr2_1:31305460-31305479 None:intergenic 35.0%
TACTGGTATCAAGACAGTAA+AGG + chr2_1:31305581-31305600 Msa0205060:intron 35.0%
CTTGGAATTGAAACAGATCA+AGG - chr2_1:31305645-31305664 None:intergenic 35.0%
TGATGATTGTGGAGTTGTTA+AGG - chr2_1:31305693-31305712 None:intergenic 35.0%
TGTCTAAGCAATGATGATTG+TGG - chr2_1:31305704-31305723 None:intergenic 35.0%
GATCTTTAACTCTCGTATCA+TGG + chr2_1:31305724-31305743 Msa0205060:intron 35.0%
! GCAAGTGGATGATATTGATT+AGG - chr2_1:31306011-31306030 None:intergenic 35.0%
AGATAAGGAATTACTGCAAG+TGG - chr2_1:31306026-31306045 None:intergenic 35.0%
ATCCACATAGCTCAATAATG+AGG + chr2_1:31306180-31306199 Msa0205060:intron 35.0%
TCCACATAGCTCAATAATGA+GGG + chr2_1:31306181-31306200 Msa0205060:intron 35.0%
AACAACTTAGCATGCATGAT+TGG - chr2_1:31306328-31306347 None:intergenic 35.0%
AAATGAACCATATCCGTTGT+GGG + chr2_1:31306388-31306407 Msa0205060:CDS 35.0%
TCGATGTAAGTGTACATTGA+TGG + chr2_1:31306487-31306506 Msa0205060:intron 35.0%
!! CAGATTACGTCATTTTGTTC+GGG + chr2_1:31306746-31306765 Msa0205060:intron 35.0%
TTAGGATTCTGGTACTTGTA+TGG + chr2_1:31306965-31306984 Msa0205060:intron 35.0%
ACGGATATCAAGTAAATTGC+AGG - chr2_1:31307048-31307067 None:intergenic 35.0%
! TCATATCTTTTACCCTTTCC+TGG + chr2_1:31307106-31307125 Msa0205060:intron 35.0%
CAATTTCCCACTTGAATCAA+CGG - chr2_1:31307377-31307396 None:intergenic 35.0%
AGTTAAAGAATGTCACCTGT+CGG - chr2_1:31307564-31307583 None:intergenic 35.0%
TATCAGTAGTGATTAGACAC+AGG - chr2_1:31307588-31307607 None:intergenic 35.0%
ATATGTCATGTCATCTCGAA+TGG + chr2_1:31307605-31307624 Msa0205060:intron 35.0%
GGTAGAGTACAGAAATTAGT+TGG - chr2_1:31307633-31307652 None:intergenic 35.0%
GAATTCTTTCTTCCCTCAAA+TGG + chr2_1:31307679-31307698 Msa0205060:intron 35.0%
!! CTGATGCTTTAAAACGTTGT+TGG + chr2_1:31307944-31307963 Msa0205060:three_prime_UTR 35.0%
!! TGTTGGTTTATGTGATGTTG+AGG + chr2_1:31307961-31307980 Msa0205060:three_prime_UTR 35.0%
GACTTCAATTCAATCATTGC+AGG - chr2_1:31307987-31308006 None:intergenic 35.0%
TAAACATCAAAACCACATCC+AGG - chr2_1:31308189-31308208 None:intergenic 35.0%
TGGATCCGATTATTCCAAGA+AGG - chr2_1:31303781-31303800 None:intergenic 40.0%
CCAACCTCTAGATCCTAATT+TGG - chr2_1:31303891-31303910 None:intergenic 40.0%
CCAAATTAGGATCTAGAGGT+TGG + chr2_1:31303888-31303907 Msa0205060:five_prime_UTR 40.0%
!! GATCTAGAGGTTGGTAAAGA+TGG + chr2_1:31303897-31303916 Msa0205060:five_prime_UTR 40.0%
GTGTAAAAGCTGTACAGATC+TGG - chr2_1:31304257-31304276 None:intergenic 40.0%
ATAGCTGAAATACACCGCAA+GGG - chr2_1:31304402-31304421 None:intergenic 40.0%
TATAGCTGAAATACACCGCA+AGG - chr2_1:31304403-31304422 None:intergenic 40.0%
! AACCCTTTGGGTTTGAAATG+TGG + chr2_1:31304585-31304604 Msa0205060:intron 40.0%
GTCCACATTTCAAACCCAAA+GGG - chr2_1:31304590-31304609 None:intergenic 40.0%
TCAGAAGAATGGGAGCAAAA+AGG + chr2_1:31304633-31304652 Msa0205060:intron 40.0%
CAGAAGAATGGGAGCAAAAA+GGG + chr2_1:31304634-31304653 Msa0205060:intron 40.0%
! AGTTTTTGATACCATGCCCA+CGG + chr2_1:31304680-31304699 Msa0205060:intron 40.0%
GTGTGGTATAGTTGAGACAT+AGG + chr2_1:31304852-31304871 Msa0205060:intron 40.0%
ATGGATCCGAATACCATGTT+GGG - chr2_1:31304894-31304913 None:intergenic 40.0%
TATGGATCCGAATACCATGT+TGG - chr2_1:31304895-31304914 None:intergenic 40.0%
GTATTCGGATCCATACTTGA+TGG + chr2_1:31304900-31304919 Msa0205060:intron 40.0%
ATTGCATGGTCCATCAAGTA+TGG - chr2_1:31304913-31304932 None:intergenic 40.0%
TACACTGAGCACAGTAGATA+GGG - chr2_1:31304978-31304997 None:intergenic 40.0%
CAATGCAGAGGAAAGAGAAA+AGG - chr2_1:31305014-31305033 None:intergenic 40.0%
GGATATTAAGGATGACAGTG+GGG - chr2_1:31305088-31305107 None:intergenic 40.0%
TGGACACGCTAAGGATATTA+AGG - chr2_1:31305100-31305119 None:intergenic 40.0%
TTGACAACCAGATAGAAACC+AGG - chr2_1:31305201-31305220 None:intergenic 40.0%
TGGTTTCTATCTGGTTGTCA+AGG + chr2_1:31305200-31305219 Msa0205060:intron 40.0%
GGTTTCTATCTGGTTGTCAA+GGG + chr2_1:31305201-31305220 Msa0205060:intron 40.0%
! CAAGGTATCAAAGTGGCTTT+GGG - chr2_1:31305293-31305312 None:intergenic 40.0%
ACCCAAAAGTGAAACTTCCA+AGG - chr2_1:31305311-31305330 None:intergenic 40.0%
CACAGTATGGGTGAAAACAA+GGG - chr2_1:31305360-31305379 None:intergenic 40.0%
ACACAGTATGGGTGAAAACA+AGG - chr2_1:31305361-31305380 None:intergenic 40.0%
! TGTTTTCACCCATACTGTGT+TGG + chr2_1:31305361-31305380 Msa0205060:intron 40.0%
AGACTCAACCAACACAGTAT+GGG - chr2_1:31305372-31305391 None:intergenic 40.0%
AAGACTCAACCAACACAGTA+TGG - chr2_1:31305373-31305392 None:intergenic 40.0%
TTGATGCCATATAAGGACTC+GGG - chr2_1:31305416-31305435 None:intergenic 40.0%
CTCTTCAAGAATGGTTCCAT+AGG + chr2_1:31305441-31305460 Msa0205060:intron 40.0%
ATTGTGGAGTTGTTAAGGAG+CGG - chr2_1:31305688-31305707 None:intergenic 40.0%
! ATTTGTCTGAGATGTGTCCA+TGG + chr2_1:31305747-31305766 Msa0205060:intron 40.0%
! AACCACCCAACTATTGGTTA+TGG + chr2_1:31305891-31305910 Msa0205060:intron 40.0%
! ACCACCCAACTATTGGTTAT+GGG + chr2_1:31305892-31305911 Msa0205060:intron 40.0%
CGTGTAAACTTCAGGATGTT+TGG + chr2_1:31306225-31306244 Msa0205060:intron 40.0%
CAAATGAACCATATCCGTTG+TGG + chr2_1:31306387-31306406 Msa0205060:CDS 40.0%
ACAACACTCATGTATCCTCA+TGG + chr2_1:31306420-31306439 Msa0205060:CDS 40.0%
CAAACTGCACATTTGACTGA+AGG - chr2_1:31306450-31306469 None:intergenic 40.0%
TTGTTCGGGCTTCAATTTGT+TGG + chr2_1:31306760-31306779 Msa0205060:intron 40.0%
! TGTTCGGGCTTCAATTTGTT+GGG + chr2_1:31306761-31306780 Msa0205060:intron 40.0%
GAAAAGAAAGACAGGATCGT+AGG + chr2_1:31306834-31306853 Msa0205060:intron 40.0%
CAAGTAAATTGCAGGCATAG+AGG - chr2_1:31307040-31307059 None:intergenic 40.0%
ATTGTCCTGTAGATGACCAA+TGG + chr2_1:31307129-31307148 Msa0205060:intron 40.0%
GTTTCATTAGGTGTCAGTAC+AGG - chr2_1:31307168-31307187 None:intergenic 40.0%
TGCAGTAGAAGATACCGTTT+CGG - chr2_1:31307199-31307218 None:intergenic 40.0%
!! CTATGTCCGTTGATTCAAGT+GGG + chr2_1:31307368-31307387 Msa0205060:CDS 40.0%
!! CGTTGATTCAAGTGGGAAAT+TGG + chr2_1:31307375-31307394 Msa0205060:CDS 40.0%
!!! TATTTTTGGTCTCTACCGAC+AGG + chr2_1:31307546-31307565 Msa0205060:intron 40.0%
TCTTCCCTCAAATGGATGTT+TGG + chr2_1:31307687-31307706 Msa0205060:intron 40.0%
CTTCCCTCAAATGGATGTTT+GGG + chr2_1:31307688-31307707 Msa0205060:intron 40.0%
CCAGTAGAAAATGCAGGATA+TGG - chr2_1:31307802-31307821 None:intergenic 40.0%
! CCATATCCTGCATTTTCTAC+TGG + chr2_1:31307799-31307818 Msa0205060:intron 40.0%
ACTGAACCAGTAGAAAATGC+AGG - chr2_1:31307808-31307827 None:intergenic 40.0%
TTAAGAATGTGAACTGGCAC+AGG + chr2_1:31307877-31307896 Msa0205060:intron 40.0%
ACAGGTAAGCAATGTTGTTG+TGG + chr2_1:31307895-31307914 Msa0205060:intron 40.0%
CAGGTAAGCAATGTTGTTGT+GGG + chr2_1:31307896-31307915 Msa0205060:intron 40.0%
TTGGATGTAGATGCGAAATG+AGG - chr2_1:31308127-31308146 None:intergenic 40.0%
GCATCTACATCCAAATCGAT+AGG + chr2_1:31308133-31308152 Msa0205060:three_prime_UTR 40.0%
TTGTCTCGAATTACAAGTCC+TGG + chr2_1:31308168-31308187 Msa0205060:three_prime_UTR 40.0%
AAATTTCCTGATGTGCCTGC+AGG + chr2_1:31304092-31304111 Msa0205060:CDS 45.0%
TGTGACATTTCCATTCCTGC+AGG - chr2_1:31304110-31304129 None:intergenic 45.0%
GTTACAGCAGGAACATCTCA+CGG - chr2_1:31304186-31304205 None:intergenic 45.0%
ATCGATGGTATACCAAACCC+TGG + chr2_1:31304335-31304354 Msa0205060:intron 45.0%
CAAGGGGAAAGAAGAAAGGA+AGG - chr2_1:31304385-31304404 None:intergenic 45.0%
TCCTTTCTTCTTTCCCCTTG+CGG + chr2_1:31304385-31304404 Msa0205060:intron 45.0%
TAGCTGAAATACACCGCAAG+GGG - chr2_1:31304401-31304420 None:intergenic 45.0%
ATTTGTGGAGAGTAGGTCAC+TGG - chr2_1:31304501-31304520 None:intergenic 45.0%
! CCAAAGGGTTTTTGCACAAG+GGG - chr2_1:31304575-31304594 None:intergenic 45.0%
! CCCAAAGGGTTTTTGCACAA+GGG - chr2_1:31304576-31304595 None:intergenic 45.0%
CCCTTGTGCAAAAACCCTTT+GGG + chr2_1:31304573-31304592 Msa0205060:intron 45.0%
! ACCCAAAGGGTTTTTGCACA+AGG - chr2_1:31304577-31304596 None:intergenic 45.0%
CGTCCACATTTCAAACCCAA+AGG - chr2_1:31304591-31304610 None:intergenic 45.0%
! TTGGGTTTGAAATGTGGACG+TGG + chr2_1:31304591-31304610 Msa0205060:intron 45.0%
! GTTTGAAATGTGGACGTGGT+GGG + chr2_1:31304595-31304614 Msa0205060:intron 45.0%
! TTTGAAATGTGGACGTGGTG+GGG + chr2_1:31304596-31304615 Msa0205060:intron 45.0%
! AGGGTTGACTTTCGATTGGT+TGG + chr2_1:31304653-31304672 Msa0205060:intron 45.0%
! GTTTTTGATACCATGCCCAC+GGG + chr2_1:31304681-31304700 Msa0205060:intron 45.0%
!! CTTTTAGAAGGTTTGCCCGT+GGG - chr2_1:31304699-31304718 None:intergenic 45.0%
CTCAACTATACCACACACCT+TGG - chr2_1:31304848-31304867 None:intergenic 45.0%
GTACACTGAGCACAGTAGAT+AGG - chr2_1:31304979-31304998 None:intergenic 45.0%
AAAGAGAAAAGGCTACACCG+AGG - chr2_1:31305003-31305022 None:intergenic 45.0%
TCTCTTTCCTCTGCATTGCT+TGG + chr2_1:31305016-31305035 Msa0205060:intron 45.0%
TTTCCTCTGCATTGCTTGGT+GGG + chr2_1:31305020-31305039 Msa0205060:intron 45.0%
ATTAAGGATGACAGTGGGGT+AGG - chr2_1:31305084-31305103 None:intergenic 45.0%
AACAGAAACCTTGCAGGATG+TGG - chr2_1:31305163-31305182 None:intergenic 45.0%
AAGGTTTCTGTTCCCTTGCT+TGG + chr2_1:31305171-31305190 Msa0205060:intron 45.0%
! CCAAGGTATCAAAGTGGCTT+TGG - chr2_1:31305294-31305313 None:intergenic 45.0%
! CCAAAGCCACTTTGATACCT+TGG + chr2_1:31305291-31305310 Msa0205060:intron 45.0%
TGTATCCCCGAGTCCTTATA+TGG + chr2_1:31305407-31305426 Msa0205060:intron 45.0%
TGATGCCATATAAGGACTCG+GGG - chr2_1:31305415-31305434 None:intergenic 45.0%
GTGTAGCACTTAGCAGTAGA+AGG - chr2_1:31305513-31305532 None:intergenic 45.0%
ATCAAATAGATGAGGCCCCA+AGG - chr2_1:31305537-31305556 None:intergenic 45.0%
CAGACTTCTCGAAAGTAGCT+TGG - chr2_1:31305663-31305682 None:intergenic 45.0%
! CAAGCTACTTTCGAGAAGTC+TGG + chr2_1:31305661-31305680 Msa0205060:intron 45.0%
TTGTGGAGTTGTTAAGGAGC+GGG - chr2_1:31305687-31305706 None:intergenic 45.0%
TCGTACAAGTGTCAGACACA+AGG + chr2_1:31305828-31305847 Msa0205060:intron 45.0%
ACAAGGACACACACAATCTC+AGG + chr2_1:31305845-31305864 Msa0205060:intron 45.0%
CAAGGACACACACAATCTCA+GGG + chr2_1:31305846-31305865 Msa0205060:intron 45.0%
AAGGACACACACAATCTCAG+GGG + chr2_1:31305847-31305866 Msa0205060:intron 45.0%
GCTAACAACCACCCAACTAT+TGG + chr2_1:31305885-31305904 Msa0205060:intron 45.0%
GAGGCCCATAACCAATAGTT+GGG - chr2_1:31305899-31305918 None:intergenic 45.0%
AGAGGCCCATAACCAATAGT+TGG - chr2_1:31305900-31305919 None:intergenic 45.0%
GCCCTCATTATTGAGCTATG+TGG - chr2_1:31306185-31306204 None:intergenic 45.0%
! GAGGATACATGAGTGTTGTC+CGG - chr2_1:31306419-31306438 None:intergenic 45.0%
CTACAGGACAATCCAGGAAA+GGG - chr2_1:31307121-31307140 None:intergenic 45.0%
TCTACAGGACAATCCAGGAA+AGG - chr2_1:31307122-31307141 None:intergenic 45.0%
TCCTGTAGATGACCAATGGA+AGG + chr2_1:31307133-31307152 Msa0205060:intron 45.0%
TTAGGTGTCAGTACAGGAGT+TGG - chr2_1:31307162-31307181 None:intergenic 45.0%
! TCGGAGCTGGTTGTTTCATT+AGG - chr2_1:31307180-31307199 None:intergenic 45.0%
TGAAACAACCAGCTCCGAAA+CGG + chr2_1:31307182-31307201 Msa0205060:CDS 45.0%
AAAGTGAGGTCTTGACTGCA+GGG - chr2_1:31307320-31307339 None:intergenic 45.0%
!! ACAGTTTGGCTCTCAAAGTG+AGG - chr2_1:31307334-31307353 None:intergenic 45.0%
CCACTTGAATCAACGGACAT+AGG - chr2_1:31307370-31307389 None:intergenic 45.0%
!! CCTATGTCCGTTGATTCAAG+TGG + chr2_1:31307367-31307386 Msa0205060:CDS 45.0%
! GTACTCTACCGTAACTTGCA+CGG + chr2_1:31307643-31307662 Msa0205060:intron 45.0%
AGGAGAATCCGTGCAAGTTA+CGG - chr2_1:31307654-31307673 None:intergenic 45.0%
GGTCCCAAACATCCATTTGA+GGG - chr2_1:31307694-31307713 None:intergenic 45.0%
TGGTCCCAAACATCCATTTG+AGG - chr2_1:31307695-31307714 None:intergenic 45.0%
TCTAGACTCTTCTCCGTTCA+AGG + chr2_1:31308005-31308024 Msa0205060:three_prime_UTR 45.0%
CGAATTACAAGTCCTGGATG+TGG + chr2_1:31308174-31308193 Msa0205060:three_prime_UTR 45.0%
! GACTTGGTAAGCATGATCAG+TGG + chr2_1:31308218-31308237 Msa0205060:three_prime_UTR 45.0%
CATGGACACACATACGTGTG+TGG - chr2_1:31303801-31303820 None:intergenic 50.0%
ACATTGCTAATGCACGCACG+TGG + chr2_1:31304152-31304171 Msa0205060:CDS 50.0%
ACCGCAAGGGGAAAGAAGAA+AGG - chr2_1:31304389-31304408 None:intergenic 50.0%
CCCCTTGTGCAAAAACCCTT+TGG + chr2_1:31304572-31304591 Msa0205060:intron 50.0%
! GGTTTGAAATGTGGACGTGG+TGG + chr2_1:31304594-31304613 Msa0205060:intron 50.0%
!! GCTTTTAGAAGGTTTGCCCG+TGG - chr2_1:31304700-31304719 None:intergenic 50.0%
TGAGCACAGTAGATAGGGCA+GGG - chr2_1:31304973-31304992 None:intergenic 50.0%
ACTGTGCTCAGTGTACACCT+CGG + chr2_1:31304983-31305002 Msa0205060:intron 50.0%
CTTTCCTCTGCATTGCTTGG+TGG + chr2_1:31305019-31305038 Msa0205060:intron 50.0%
! TTCCTCTGCATTGCTTGGTG+GGG + chr2_1:31305021-31305040 Msa0205060:intron 50.0%
TGGGGCTGTAGAGTTACTGT+TGG + chr2_1:31305039-31305058 Msa0205060:intron 50.0%
GCTTCATTTGCAGCACACCA+TGG - chr2_1:31305128-31305147 None:intergenic 50.0%
AGAAACCTTGCAGGATGTGG+TGG - chr2_1:31305160-31305179 None:intergenic 50.0%
CAAGGGAACAGAAACCTTGC+AGG - chr2_1:31305169-31305188 None:intergenic 50.0%
AAACCAGGTGCACCAAGCAA+GGG - chr2_1:31305186-31305205 None:intergenic 50.0%
TGGTGCACCTGGTTTCTATC+TGG + chr2_1:31305191-31305210 Msa0205060:intron 50.0%
GCTAAGGGCCTAAATAAGGC+CGG - chr2_1:31305257-31305276 None:intergenic 50.0%
!! GCCTTATTTAGGCCCTTAGC+TGG + chr2_1:31305257-31305276 Msa0205060:intron 50.0%
GCCAGCTAAGGGCCTAAATA+AGG - chr2_1:31305261-31305280 None:intergenic 50.0%
TGCTAAGTGCTACACGCCTT+GGG + chr2_1:31305518-31305537 Msa0205060:intron 50.0%
! GATGTGTCCATGGAGTGCTA+AGG + chr2_1:31305757-31305776 Msa0205060:intron 50.0%
GCCCATAACCAATAGTTGGG+TGG - chr2_1:31305896-31305915 None:intergenic 50.0%
ATATCCGTTGTGGGAACTGC+CGG + chr2_1:31306397-31306416 Msa0205060:CDS 50.0%
TTGACTGAAGGAGCTCCATG+AGG - chr2_1:31306438-31306457 None:intergenic 50.0%
CTCATGACAGTCGCGTGTTA+TGG - chr2_1:31307003-31307022 None:intergenic 50.0%
GGTCATCTACAGGACAATCC+AGG - chr2_1:31307127-31307146 None:intergenic 50.0%
GCCTTCCATTGGTCATCTAC+AGG - chr2_1:31307137-31307156 None:intergenic 50.0%
AGAAGATACCGTTTCGGAGC+TGG - chr2_1:31307193-31307212 None:intergenic 50.0%
CAAAGTGAGGTCTTGACTGC+AGG - chr2_1:31307321-31307340 None:intergenic 50.0%
TTGTGGGCGTTACAACAGAG+AGG + chr2_1:31307912-31307931 Msa0205060:CDS 50.0%
GCATGATCAGTGGATCGATG+TGG + chr2_1:31308228-31308247 Msa0205060:three_prime_UTR 50.0%
TCCTGATGTGCCTGCAGGAA+TGG + chr2_1:31304097-31304116 Msa0205060:CDS 55.0%
TCCATTCCTGCAGGCACATC+AGG - chr2_1:31304101-31304120 None:intergenic 55.0%
GAGCACAGTAGATAGGGCAG+GGG - chr2_1:31304972-31304991 None:intergenic 55.0%
CTGAGCACAGTAGATAGGGC+AGG - chr2_1:31304974-31304993 None:intergenic 55.0%
ATGGTGCACTGGACACGCTA+AGG - chr2_1:31305109-31305128 None:intergenic 55.0%
TTAGCGTGTCCAGTGCACCA+TGG + chr2_1:31305108-31305127 Msa0205060:intron 55.0%
GTGTACCACCACATCCTGCA+AGG + chr2_1:31305152-31305171 Msa0205060:intron 55.0%
GAAACCAGGTGCACCAAGCA+AGG - chr2_1:31305187-31305206 None:intergenic 55.0%
!! AAGTGGCTTTGGGCAAGTGC+TGG - chr2_1:31305283-31305302 None:intergenic 55.0%
CTGCTAAGTGCTACACGCCT+TGG + chr2_1:31305517-31305536 Msa0205060:intron 55.0%
GCTAAGTGCTACACGCCTTG+GGG + chr2_1:31305519-31305538 Msa0205060:intron 55.0%
CGACACACCTTAGCACTCCA+TGG - chr2_1:31305767-31305786 None:intergenic 55.0%
GGCAGTTCCCACAACGGATA+TGG - chr2_1:31306398-31306417 None:intergenic 55.0%
TTGTCCGGCAGTTCCCACAA+CGG - chr2_1:31306404-31306423 None:intergenic 55.0%
ACACGCGACTGTCATGAGCA+CGG + chr2_1:31307005-31307024 Msa0205060:intron 55.0%
GGTGTCAGTACAGGAGTTGG+CGG - chr2_1:31307159-31307178 None:intergenic 55.0%
AGAAGGTTTGCCCGTGGGCA+TGG - chr2_1:31304694-31304713 None:intergenic 60.0%
AGCCCCACCAAGCAATGCAG+AGG - chr2_1:31305026-31305045 None:intergenic 60.0%
TGCAGCACACCATGGTGCAC+TGG - chr2_1:31305120-31305139 None:intergenic 60.0%
!! GTTCCCTTGCTTGGTGCACC+TGG + chr2_1:31305180-31305199 Msa0205060:intron 60.0%
!! GGCAAGTGCTGGCCAGCTAA+GGG - chr2_1:31305272-31305291 None:intergenic 60.0%
CACGCGACTGTCATGAGCAC+GGG + chr2_1:31307006-31307025 Msa0205060:intron 60.0%
AGGAGTTGGCGGCCTTCCAT+TGG - chr2_1:31307148-31307167 None:intergenic 60.0%
!! GGGCAAGTGCTGGCCAGCTA+AGG - chr2_1:31305273-31305292 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 31303763 31308353 31303763 ID=Msa0205060;Name=Msa0205060
chr2_1 mRNA 31303763 31308353 31303763 ID=Msa0205060-mRNA-1;Parent=Msa0205060;Name=Msa0205060-mRNA-1;_AED=0.17;_eAED=0.17;_QI=308|1|1|1|1|1|5|413|147
chr2_1 exon 31303763 31304224 31303763 ID=Msa0205060-mRNA-1:exon:11018;Parent=Msa0205060-mRNA-1
chr2_1 exon 31306379 31306491 31306379 ID=Msa0205060-mRNA-1:exon:11019;Parent=Msa0205060-mRNA-1
chr2_1 exon 31307141 31307203 31307141 ID=Msa0205060-mRNA-1:exon:11020;Parent=Msa0205060-mRNA-1
chr2_1 exon 31307325 31307396 31307325 ID=Msa0205060-mRNA-1:exon:11021;Parent=Msa0205060-mRNA-1
chr2_1 exon 31307899 31308353 31307899 ID=Msa0205060-mRNA-1:exon:11022;Parent=Msa0205060-mRNA-1
chr2_1 five_prime_UTR 31303763 31304070 31303763 ID=Msa0205060-mRNA-1:five_prime_utr;Parent=Msa0205060-mRNA-1
chr2_1 CDS 31304071 31304224 31304071 ID=Msa0205060-mRNA-1:cds;Parent=Msa0205060-mRNA-1
chr2_1 CDS 31306379 31306491 31306379 ID=Msa0205060-mRNA-1:cds;Parent=Msa0205060-mRNA-1
chr2_1 CDS 31307141 31307203 31307141 ID=Msa0205060-mRNA-1:cds;Parent=Msa0205060-mRNA-1
chr2_1 CDS 31307325 31307396 31307325 ID=Msa0205060-mRNA-1:cds;Parent=Msa0205060-mRNA-1
chr2_1 CDS 31307899 31307940 31307899 ID=Msa0205060-mRNA-1:cds;Parent=Msa0205060-mRNA-1
chr2_1 three_prime_UTR 31307941 31308353 31307941 ID=Msa0205060-mRNA-1:three_prime_utr;Parent=Msa0205060-mRNA-1
Gene Sequence

>Msa0205060

ATGGTTACATCCAGGGATCTAAAATTTCCTGATGTGCCTGCAGGAATGGAAATGTCACAACTTTATTGTGGAGGTTGTAGAACATTGCTAATGCACGCACGTGGAGCTACTACCGTGAGATGTTCCTGCTGTAACACTATAAATCTTGTGCCAGATTCTAATCAAATGAACCATATCCGTTGTGGGAACTGCCGGACAACACTCATGTATCCTCATGGAGCTCCTTCAGTCAAATGTGCAGTTTGTCACTATATTACTAATGTCGATATGACCAATGGAAGGCCGCCAACTCCTGTACTGACACCTAATGAAACAACCAGCTCCGAAACGTCAAGACCTCACTTTGAGAGCCAAACTGTAGTAGTAGAAAATCCTATGTCCGTTGATTCAAGTGGGAAATTGGTAAGCAATGTTGTTGTGGGCGTTACAACAGAGAGGAAATGA
Protein sequence

>Msa0205060

MVTSRDLKFPDVPAGMEMSQLYCGGCRTLLMHARGATTVRCSCCNTINLVPDSNQMNHIRCGNCRTTLMYPHGAPSVKCAVCHYITNVDMTNGRPPTPVLTPNETTSSETSRPHFESQTVVVENPMSVDSSGKLVSNVVVGVTTERK*