AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212800 MtrunA17_Chr2g0312161 88.554 830 45 6 1 781 1 829 0.0 1437
Msa0212800 MtrunA17_Chr2g0319221 57.143 63 23 1 1 63 1 59 3.30e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212800 AT1G04390.1 38.290 807 442 11 23 781 10 808 1.64e-163 501

Find 194 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTGTTATTAACTTAAT+TGG 0.088135 2_1:-54959936 Msa0212800:CDS
GGAATCTGCTGCTGATATTT+TGG 0.141395 2_1:-54961639 Msa0212800:CDS
AGTTTATTGACTTGTCATTT+TGG 0.150287 2_1:-54958771 Msa0212800:three_prime_UTR
TCTTATATTCTAAGTTATTT+TGG 0.154673 2_1:-54959534 Msa0212800:CDS
CTCCTTCATATAGGCAATTA+AGG 0.156017 2_1:-54957572 Msa0212800:three_prime_UTR
GCTTGGTGAGTTCTGGATTT+TGG 0.177722 2_1:-54957730 Msa0212800:three_prime_UTR
TGCAAACTGTATTCCATAAA+AGG 0.232443 2_1:-54959776 Msa0212800:CDS
AGACCTGGTGCCAAGGTTTA+AGG 0.234948 2_1:+54962960 None:intergenic
CTCTCTCATCCCACAAATTA+TGG 0.241887 2_1:+54960763 None:intergenic
CTAAAGCTGTACACATCTTT+AGG 0.249325 2_1:-54961158 Msa0212800:intron
ATTGTTGGAATATGTATATT+TGG 0.255950 2_1:-54959247 Msa0212800:CDS
TTGTGCTACTGCTTTGAATT+TGG 0.257052 2_1:-54961441 Msa0212800:CDS
TTTGTTGGCTTGGTGAGTTC+TGG 0.258921 2_1:-54957737 Msa0212800:three_prime_UTR
GCTATGTTACAGTTTATATT+AGG 0.264244 2_1:-54957264 Msa0212800:three_prime_UTR
GCAAAGGAATGTCTAGTAAA+AGG 0.277394 2_1:+54959658 None:intergenic
AAGAGAGTTCCCAATCCTTT+TGG 0.277839 2_1:+54959485 None:intergenic
CTCCAATGGCAAAACAATTT+CGG 0.283584 2_1:+54960568 None:intergenic
GGCAATTAAAATAATCAAAA+TGG 0.286723 2_1:-54957646 Msa0212800:three_prime_UTR
GTCTGGATGTGATTATTTAC+AGG 0.297365 2_1:-54958537 Msa0212800:three_prime_UTR
ATAGTTGTTCTCAATCCTTT+TGG 0.298736 2_1:+54960727 None:intergenic
AACATTTGTTTAAGTAGTTT+AGG 0.303571 2_1:-54958698 Msa0212800:three_prime_UTR
TCAGGGATAATATATAATCT+AGG 0.310303 2_1:+54959985 None:intergenic
TCCATAAAAGGTCTTGTTGC+TGG 0.312735 2_1:-54959764 Msa0212800:CDS
TTGTTGGAATATGTATATTT+GGG 0.319518 2_1:-54959246 Msa0212800:CDS
CAGTCATTCACAAGTTATAA+AGG 0.319849 2_1:-54957898 Msa0212800:three_prime_UTR
AAGGAAGCTACTCAAGTATA+TGG 0.321915 2_1:+54958944 None:intergenic
GGTAACTGTTACAGTTAGTT+AGG 0.324663 2_1:-54957243 Msa0212800:three_prime_UTR
TATATGGAAGGAAATAAATA+TGG 0.328815 2_1:+54958960 None:intergenic
CTTCCACAAAGAGAGCTTAT+AGG 0.328839 2_1:+54957623 None:intergenic
TTTCTGCAGCTTCACATTTG+TGG 0.335071 2_1:-54960198 Msa0212800:intron
TAGCCTAACAGCTCAAAATA+AGG 0.350134 2_1:+54957283 None:intergenic
GATTGGGAACTCTCTTAATA+AGG 0.355453 2_1:-54959478 Msa0212800:CDS
AAAAGGATTGAGAACAACTA+TGG 0.357983 2_1:-54960725 Msa0212800:CDS
TGTTGAGGTGGCCTTCATCT+AGG 0.358318 2_1:-54961265 Msa0212800:CDS
GCAAAACAATTTCGGAAGAT+TGG 0.358748 2_1:+54960576 None:intergenic
AACTTGTTATTAACTTAATT+GGG 0.359198 2_1:-54959935 Msa0212800:CDS
ATTAAAACAGCCCTTGATAC+TGG 0.361067 2_1:+54960113 None:intergenic
TGAAGCATTGATGTTATTGT+TGG 0.363458 2_1:-54959262 Msa0212800:CDS
ATGTTCGGATAGAGGGGTTT+CGG 0.364447 2_1:-54960945 Msa0212800:CDS
CAATAGAAGCGGAATAAATA+AGG 0.367946 2_1:+54957508 None:intergenic
AGATTCTTCTAGATATCTAT+AGG 0.370144 2_1:-54959032 Msa0212800:CDS
TTGATGAAAATACAAATAGA+TGG 0.374623 2_1:-54962845 Msa0212800:CDS
TTGCGACTCATTGTAGCAAA+TGG 0.377835 2_1:-54959441 Msa0212800:CDS
TCGGCTTGCTCAATGTCTAT+TGG 0.377904 2_1:-54960926 Msa0212800:intron
AAAGTATTCAGGAAGCTTGC+TGG 0.379435 2_1:-54957707 Msa0212800:three_prime_UTR
TCCTTCATATAGGCAATTAA+GGG 0.380231 2_1:-54957571 Msa0212800:three_prime_UTR
AGTTATGTGTGGGACGTTCT+TGG 0.385008 2_1:-54960488 Msa0212800:CDS
TCAAATTGGTTGATGATTGA+TGG 0.387916 2_1:-54963166 Msa0212800:five_prime_UTR
AACAAACACGGTTGCAATAG+TGG 0.393093 2_1:+54961524 None:intergenic
AGAAAATTGTTTAAAAGTGA+TGG 0.395093 2_1:-54960813 Msa0212800:CDS
AAAATGACAAGTCAATAAAC+TGG 0.400238 2_1:+54958773 None:intergenic
AAAAGGTCTTGTTGCTGGAT+TGG 0.407271 2_1:-54959759 Msa0212800:CDS
TATGTGGAGCTTTGTTGGCT+TGG 0.408026 2_1:-54957747 Msa0212800:three_prime_UTR
GCTAAATTGAATGGGCTTGT+TGG 0.410643 2_1:-54958623 Msa0212800:three_prime_UTR
AGTTCAACATCATTACAAAC+AGG 0.413790 2_1:+54961239 None:intergenic
ACTATTGCAACCGTGTTTGT+TGG 0.414256 2_1:-54961522 Msa0212800:CDS
TTATAAAGGTTGATATTAGC+TGG 0.423730 2_1:-54957884 Msa0212800:three_prime_UTR
CTTCTCCATTCCTTAAACCT+TGG 0.423873 2_1:-54962970 Msa0212800:CDS
CAACTATGGTTCTGTATTAG+TGG 0.423956 2_1:-54960711 Msa0212800:CDS
TGCGACTCATTGTAGCAAAT+GGG 0.425092 2_1:-54959440 Msa0212800:CDS
AGCCATATGTGGAGCTTTGT+TGG 0.425519 2_1:-54957752 Msa0212800:three_prime_UTR
TATAGATATCTAGAAGAATC+TGG 0.427973 2_1:+54959034 None:intergenic
CCCTCATGATGTTCGGATAG+AGG 0.430203 2_1:-54960953 Msa0212800:CDS
TTACAGGGTTTGTTCAGATC+AGG 0.430822 2_1:-54958521 Msa0212800:three_prime_UTR
GGGGATTCCGTGAGTGTTCA+TGG 0.433973 2_1:-54959420 Msa0212800:CDS
TGGAATACAGTTTGCAAATG+AGG 0.436839 2_1:+54959783 None:intergenic
CTATAAACTGGATAATAGAA+TGG 0.438864 2_1:+54958817 None:intergenic
TTGTTGATGCCATAATTTGT+GGG 0.444369 2_1:-54960772 Msa0212800:CDS
GTTATGTGTGGGACGTTCTT+GGG 0.450565 2_1:-54960487 Msa0212800:CDS
TATATTTCGAACAATGCAAA+TGG 0.452695 2_1:+54961352 None:intergenic
TCTGTAAAATATCAATTTCA+AGG 0.455343 2_1:+54958925 None:intergenic
TAAGCTCTCTTTGTGGAAGT+TGG 0.457752 2_1:-54957619 Msa0212800:three_prime_UTR
TGCAAATGAGGAGCAACCTC+TGG 0.459121 2_1:+54959795 None:intergenic
TTCAAGGTGAACCAGTATCA+AGG 0.459159 2_1:-54960124 Msa0212800:CDS
AGATGAAGTAAGATTAAAGC+TGG 0.462284 2_1:+54959101 None:intergenic
ACTTCATCTCTTGATTCAGC+TGG 0.463446 2_1:-54959087 Msa0212800:CDS
CTTTCAGTCCTGGAGTGAAA+TGG 0.463586 2_1:-54959563 Msa0212800:CDS
TCTGATATACTGAAGGTCAT+AGG 0.465492 2_1:-54960038 Msa0212800:CDS
CCTCATGATGTTCGGATAGA+GGG 0.466662 2_1:-54960952 Msa0212800:CDS
CACAAAGTTATATTGCAGTC+TGG 0.467245 2_1:-54958554 Msa0212800:three_prime_UTR
ATAATGGAAGCTAAATTGAA+TGG 0.468646 2_1:-54958632 Msa0212800:three_prime_UTR
ACTCTCATGGGTATAACTAC+AGG 0.470412 2_1:+54960430 None:intergenic
CTGCAAAGCATTTGCAAGAG+AGG 0.471231 2_1:+54959153 None:intergenic
AATGGAGAAGACGGCGATGA+AGG 0.471770 2_1:+54962983 None:intergenic
TGATATGAAGTTCACTCTCA+TGG 0.474270 2_1:+54960417 None:intergenic
ATGGATATTTGTTTCTCCAA+TGG 0.474322 2_1:+54960554 None:intergenic
TCTTGATTCTTCTAAGCAGT+TGG 0.480319 2_1:-54957667 Msa0212800:three_prime_UTR
GTAAGATTAAAGCTGGGAAA+AGG 0.480512 2_1:+54959108 None:intergenic
AGCCAACAAAGCTCCACATA+TGG 0.482790 2_1:+54957750 None:intergenic
AATCTAACCCTCATGATGTT+CGG 0.483450 2_1:-54960960 Msa0212800:CDS
GGAAAAGGTGTGCCCCACTT+TGG 0.488293 2_1:+54959123 None:intergenic
AGTAGCACCTCTTTCAGTCC+TGG 0.489560 2_1:-54959573 Msa0212800:CDS
TAATGGAAGCTAAATTGAAT+GGG 0.489988 2_1:-54958631 Msa0212800:three_prime_UTR
ATTTGTGGGATGAGAGAGAC+AGG 0.492475 2_1:-54960758 Msa0212800:CDS
TGGTTGTTTGTGGGTTAACA+TGG 0.493074 2_1:-54957802 Msa0212800:three_prime_UTR
AATTGAATGGGCTTGTTGGA+TGG 0.493303 2_1:-54958619 Msa0212800:three_prime_UTR
TCTGAAAGGACTGTTAAACT+TGG 0.494623 2_1:-54958869 Msa0212800:three_prime_UTR
TGAACATGCATATGTGGTAC+TGG 0.495754 2_1:+54958575 None:intergenic
ATTCAATTTGCAGCCATATG+TGG 0.496585 2_1:-54957763 Msa0212800:three_prime_UTR
CAGGGATAATATATAATCTA+GGG 0.497938 2_1:+54959986 None:intergenic
TATAAAGGTTGATATTAGCT+GGG 0.501910 2_1:-54957883 Msa0212800:three_prime_UTR
ATTCCTTAAACCTTGGCACC+AGG 0.502270 2_1:-54962963 Msa0212800:intron
GTCTCATAGCTCCTTCATAT+AGG 0.503354 2_1:-54957581 Msa0212800:three_prime_UTR
ACAAATGATTGTGCAGGCGA+TGG 0.504540 2_1:-54960986 Msa0212800:CDS
GTAGGCTGCAAGAAAAGCTT+GGG 0.508267 2_1:-54957186 Msa0212800:three_prime_UTR
CATTGATTAAACTAGTACAT+TGG 0.512817 2_1:-54957857 Msa0212800:three_prime_UTR
CTCTCATGGGTATAACTACA+GGG 0.512953 2_1:+54960431 None:intergenic
TGGCCTATAAGCTCTCTTTG+TGG 0.514178 2_1:-54957626 Msa0212800:three_prime_UTR
GCTGGATTGGTAAAGGAGAC+TGG 0.514721 2_1:-54959746 Msa0212800:CDS
CTTGTTGATGCCATAATTTG+TGG 0.517271 2_1:-54960773 Msa0212800:CDS
ATTTCTACAAATGATTGTGC+AGG 0.517797 2_1:-54960992 Msa0212800:CDS
TCTTGTTGCTGGATTGGTAA+AGG 0.518147 2_1:-54959753 Msa0212800:CDS
ATTTGATGCCATGCTTAACA+AGG 0.520764 2_1:+54961580 None:intergenic
CCCTCTATCCGAACATCATG+AGG 0.521428 2_1:+54960952 None:intergenic
TCCTTTGCAATTTAGTAGAG+AGG 0.521866 2_1:-54959643 Msa0212800:CDS
TCTATTGAACTTAACCATGA+AGG 0.522377 2_1:-54957492 Msa0212800:three_prime_UTR
GAGAGAGAGACCTGGTGCCA+AGG 0.523511 2_1:+54962953 None:intergenic
TACAGTTATGATTCATTCGA+CGG 0.524471 2_1:-54963073 Msa0212800:exon
AGTAGGCTGCAAGAAAAGCT+TGG 0.524766 2_1:-54957187 Msa0212800:three_prime_UTR
ATTGAATGGGCTTGTTGGAT+GGG 0.524976 2_1:-54958618 Msa0212800:three_prime_UTR
CAAATGATTGTGCAGGCGAT+GGG 0.525532 2_1:-54960985 Msa0212800:CDS
ATGGAGAAGACGGCGATGAA+GGG 0.526641 2_1:+54962984 None:intergenic
GTAATGATATTCATGTAGAA+AGG 0.527922 2_1:-54959818 Msa0212800:CDS
TGTAGCACAAAAGCTTATAG+AGG 0.528432 2_1:-54961025 Msa0212800:CDS
TCCCTTAATTGCCTATATGA+AGG 0.529685 2_1:+54957570 None:intergenic
GCACAAAAGCTTATAGAGGA+TGG 0.531800 2_1:-54961021 Msa0212800:CDS
CAATTAAGTTAATAACAAGT+TGG 0.532753 2_1:+54959937 None:intergenic
CACGGTTGCAATAGTGGACT+CGG 0.534163 2_1:+54961530 None:intergenic
AGACAGGGCCGTGTTCCAAA+AGG 0.534873 2_1:-54960742 Msa0212800:CDS
TGAGCACAATTCTGTTGAGG+TGG 0.536544 2_1:-54961277 Msa0212800:CDS
ATAAGAGTTGCGTTTCTGAA+AGG 0.539156 2_1:-54958883 Msa0212800:three_prime_UTR
AAAATACAAATAGATGGAAG+TGG 0.544965 2_1:-54962839 Msa0212800:CDS
GATGAAGTAAGATTAAAGCT+GGG 0.545003 2_1:+54959102 None:intergenic
ACTTCTGAAGGTAGAAGTGC+TGG 0.546217 2_1:+54959375 None:intergenic
CTGGATTGGTAAAGGAGACT+GGG 0.546314 2_1:-54959745 Msa0212800:CDS
TTGGAATATGTATATTTGGG+AGG 0.551105 2_1:-54959243 Msa0212800:CDS
GATTCATTCGACGGTGAAAG+CGG 0.556753 2_1:-54963064 Msa0212800:CDS
TTGCAGACAATCTCCAAAGT+GGG 0.558280 2_1:-54959136 Msa0212800:CDS
TTTCACTCCAGGACTGAAAG+AGG 0.560173 2_1:+54959566 None:intergenic
TGGTGCCAAGGTTTAAGGAA+TGG 0.562873 2_1:+54962965 None:intergenic
AATAAATATGGAAATAAACA+TGG 0.567158 2_1:+54958972 None:intergenic
ATGGTTAAGTTCAATAGAAG+CGG 0.567320 2_1:+54957497 None:intergenic
TCTGGATGTGATTATTTACA+GGG 0.570759 2_1:-54958536 Msa0212800:three_prime_UTR
TCAAGGTGAACCAGTATCAA+GGG 0.573541 2_1:-54960123 Msa0212800:CDS
ACCATAAAATAAGACAACAT+TGG 0.575853 2_1:+54959716 None:intergenic
ATTGGAGAAACAAATATCCA+TGG 0.576382 2_1:-54960552 Msa0212800:intron
GAAACATACCATTTCACTCC+AGG 0.577863 2_1:+54959555 None:intergenic
GATATGAAGTTCACTCTCAT+GGG 0.583514 2_1:+54960418 None:intergenic
GATTATCAACTCTCTCTCGA+CGG 0.583579 2_1:-54963107 Msa0212800:five_prime_UTR
AAATGAGCCCTTGTTAAGCA+TGG 0.585174 2_1:-54961588 Msa0212800:CDS
ATGATACATCTTTGATACTG+TGG 0.585455 2_1:+54959891 None:intergenic
AAGCTACTCAAGTATATGGA+AGG 0.586317 2_1:+54958948 None:intergenic
GCGACTCATTGTAGCAAATG+GGG 0.586804 2_1:-54959439 Msa0212800:CDS
TGTATTATCTGATATACTGA+AGG 0.587784 2_1:-54960045 Msa0212800:CDS
ACCTCTCTACTAAATTGCAA+AGG 0.591394 2_1:+54959642 None:intergenic
CAAACAGGGAACCTAGATGA+AGG 0.594928 2_1:+54961254 None:intergenic
TACTTGATGTGAGGACAGCA+AGG 0.595534 2_1:+54961478 None:intergenic
AACCCACAAACAACCAGAAG+GGG 0.597408 2_1:+54957809 None:intergenic
ACTTTGTGAACATGCATATG+TGG 0.600186 2_1:+54958569 None:intergenic
GTTAAGCATGGCATCAAATG+TGG 0.600853 2_1:-54961576 Msa0212800:CDS
TTGCTCTGAGGAGTTATGTG+TGG 0.604086 2_1:-54960499 Msa0212800:CDS
TAATACAGATCTAGCATGTG+AGG 0.610195 2_1:+54960061 None:intergenic
TGCAACTTCTACTTGATGTG+AGG 0.612048 2_1:+54961469 None:intergenic
TGCTCTGAGGAGTTATGTGT+GGG 0.613589 2_1:-54960498 Msa0212800:CDS
GGGTGGCTTACAATTCATTG+TGG 0.615987 2_1:-54960467 Msa0212800:CDS
GGTTTAAGGAATGGAGAAGA+CGG 0.616386 2_1:+54962974 None:intergenic
CTCATGATGTTCGGATAGAG+GGG 0.616659 2_1:-54960951 Msa0212800:CDS
GATGTATCATAGAAAGCAGA+GGG 0.617898 2_1:-54959878 Msa0212800:CDS
TAACCCACAAACAACCAGAA+GGG 0.618235 2_1:+54957808 None:intergenic
AATAACACCATGAACACTCA+CGG 0.621202 2_1:+54959413 None:intergenic
TGTGAGGAAATATAATTACA+TGG 0.628481 2_1:+54960077 None:intergenic
TTTGCAGACAATCTCCAAAG+TGG 0.628783 2_1:-54959137 Msa0212800:CDS
TCAGATCAGGAATGCAAGAG+AGG 0.630141 2_1:-54958508 Msa0212800:intron
TTCTGCAAAGTCCTGTCAGT+AGG 0.633451 2_1:-54957204 Msa0212800:three_prime_UTR
TTAACCCACAAACAACCAGA+AGG 0.634727 2_1:+54957807 None:intergenic
TTTCAATTAGAAGATTAAGG+AGG 0.635301 2_1:+54960609 None:intergenic
ATGTGTGGGACGTTCTTGGG+TGG 0.646051 2_1:-54960484 Msa0212800:CDS
CTACTAGATAGCACTTCTGA+AGG 0.647267 2_1:+54959363 None:intergenic
TTTGATGCCATGCTTAACAA+GGG 0.651494 2_1:+54961581 None:intergenic
AGATGTATCATAGAAAGCAG+AGG 0.653768 2_1:-54959879 Msa0212800:CDS
ATTGGTAAAGGAGACTGGGA+AGG 0.660276 2_1:-54959741 Msa0212800:CDS
CCTCTATCCGAACATCATGA+GGG 0.663643 2_1:+54960953 None:intergenic
AAATTCAAAGCAGTAGCACA+AGG 0.669590 2_1:+54961443 None:intergenic
TGCAGACAATCTCCAAAGTG+GGG 0.673141 2_1:-54959135 Msa0212800:CDS
TCAATTATCATGTTGCTCTG+AGG 0.675945 2_1:-54960511 Msa0212800:CDS
ACCCACAAACAACCAGAAGG+GGG 0.681171 2_1:+54957810 None:intergenic
GTTCAACATCATTACAAACA+GGG 0.689432 2_1:+54961240 None:intergenic
TTAAAAGTGATGGATTTGTG+TGG 0.690443 2_1:-54960803 Msa0212800:CDS
TAGACAAGATCCAACAAACA+CGG 0.705372 2_1:+54961512 None:intergenic
TATTCATGTAGAAAGGCCAG+AGG 0.722961 2_1:-54959811 Msa0212800:CDS
TCTCATGGGTATAACTACAG+GGG 0.729707 2_1:+54960432 None:intergenic
TTTGTGGGATGAGAGAGACA+GGG 0.753747 2_1:-54960757 Msa0212800:CDS
GTTCGAAATATAAAAGACCG+CGG 0.753888 2_1:-54961341 Msa0212800:CDS
ATTCAATCTTCTGTGCACCG+CGG 0.760395 2_1:+54961324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCTTTTTTTTTTTTG+CGG - chr2_1:54957674-54957693 Msa0212800:three_prime_UTR 10.0%
!!! AGAGATTTTTATTATAAATA+AGG + chr2_1:54958372-54958391 None:intergenic 10.0%
!!! TATTATAATAAAGGATATTT+TGG + chr2_1:54958438-54958457 None:intergenic 10.0%
!! TGTGATAATTATTATAATAA+AGG + chr2_1:54958447-54958466 None:intergenic 10.0%
!!! ATTATATTTCTAAAATTTCA+TGG - chr2_1:54960110-54960129 Msa0212800:CDS 10.0%
!! TGATAAAAAAACAATCAAAT+TGG - chr2_1:54957202-54957221 Msa0212800:three_prime_UTR 15.0%
!! TAAGAAAATTAGATAAAGAT+AGG - chr2_1:54957765-54957784 Msa0212800:three_prime_UTR 15.0%
!!! TAGTTTCTTATATTTTTTCT+AGG + chr2_1:54957908-54957927 None:intergenic 15.0%
!!! ATTATCACATTAATTTGTAT+TGG - chr2_1:54958458-54958477 Msa0212800:intron 15.0%
!!! TTATCACATTAATTTGTATT+GGG - chr2_1:54958459-54958478 Msa0212800:intron 15.0%
!! TTGAAAATAGAAAATCAATA+AGG - chr2_1:54958497-54958516 Msa0212800:intron 15.0%
!! TGAAAATAGAAAATCAATAA+GGG - chr2_1:54958498-54958517 Msa0212800:intron 15.0%
!!! TTGTTTTATATGATAAACAT+TGG - chr2_1:54959488-54959507 Msa0212800:CDS 15.0%
!!! TATTTTCAATTAGAAGATTA+AGG + chr2_1:54959779-54959798 None:intergenic 15.0%
!! AAGTCATACAAAAATAATAA+TGG + chr2_1:54960029-54960048 None:intergenic 15.0%
!!! AATTTTAGAAATATAATCAG+TGG + chr2_1:54960107-54960126 None:intergenic 15.0%
!!! AACTTGTTATTAACTTAATT+GGG - chr2_1:54960447-54960466 Msa0212800:CDS 15.0%
!!! TCTTATATTCTAAGTTATTT+TGG - chr2_1:54960848-54960867 Msa0212800:intron 15.0%
!! AATAAATATGGAAATAAACA+TGG + chr2_1:54961413-54961432 None:intergenic 15.0%
!!! ATTTTTAGTTTGAAAGTTAT+AGG - chr2_1:54963044-54963063 Msa0212800:CDS 15.0%
!! AAAAAGAAAAAGATAACGAT+CGG - chr2_1:54957353-54957372 Msa0212800:three_prime_UTR 20.0%
!! TTGATGAAAATACAAATAGA+TGG - chr2_1:54957537-54957556 Msa0212800:three_prime_UTR 20.0%
!! GTATTTAGATATTAATGAGT+TGG - chr2_1:54958083-54958102 Msa0212800:intron 20.0%
!! AATATTTCGTATCTATAACA+TGG - chr2_1:54958321-54958340 Msa0212800:intron 20.0%
!! TTTATTATAAATAAGGTCGA+AGG + chr2_1:54958365-54958384 None:intergenic 20.0%
!! GAAAATAGAAAATCAATAAG+GGG - chr2_1:54958499-54958518 Msa0212800:intron 20.0%
!! ATATCAAATAAAGCTGAATT+TGG - chr2_1:54958537-54958556 Msa0212800:three_prime_UTR 20.0%
!!! ATGACTTTTGCTTATAAATA+AGG - chr2_1:54958595-54958614 Msa0212800:three_prime_UTR 20.0%
!!! ATTTGTTTTAAGAGAGATAA+GGG - chr2_1:54958640-54958659 Msa0212800:three_prime_UTR 20.0%
!!! AATGTTTTTTGTTTTGTTGA+GGG + chr2_1:54959276-54959295 None:intergenic 20.0%
!!! AAATGTTTTTTGTTTTGTTG+AGG + chr2_1:54959277-54959296 None:intergenic 20.0%
!!! CACTTTTAAACAATTTTCTT+GGG + chr2_1:54959568-54959587 None:intergenic 20.0%
!!! TCACTTTTAAACAATTTTCT+TGG + chr2_1:54959569-54959588 None:intergenic 20.0%
!! AGAAAATTGTTTAAAAGTGA+TGG - chr2_1:54959569-54959588 Msa0212800:CDS 20.0%
!!! ATATGAACAATAACTTTTCA+GGG + chr2_1:54960417-54960436 None:intergenic 20.0%
!! CAATTAAGTTAATAACAAGT+TGG + chr2_1:54960448-54960467 None:intergenic 20.0%
!!! CAACTTGTTATTAACTTAAT+TGG - chr2_1:54960446-54960465 Msa0212800:CDS 20.0%
!!! CTAAGTTATTTTGGATTTTA+TGG - chr2_1:54960857-54960876 Msa0212800:intron 20.0%
!! ATTGTTGGAATATGTATATT+TGG - chr2_1:54961135-54961154 Msa0212800:intron 20.0%
!! TTGTTGGAATATGTATATTT+GGG - chr2_1:54961136-54961155 Msa0212800:intron 20.0%
!! TATATGGAAGGAAATAAATA+TGG + chr2_1:54961425-54961444 None:intergenic 20.0%
!! TCTGTAAAATATCAATTTCA+AGG + chr2_1:54961460-54961479 None:intergenic 20.0%
!!! CAACTCTTATTTGAAAAATA+CGG + chr2_1:54961489-54961508 None:intergenic 20.0%
!! AACATTTGTTTAAGTAGTTT+AGG - chr2_1:54961684-54961703 Msa0212800:intron 20.0%
!!! AGAATTTAATTTGAACATCT+AGG + chr2_1:54961979-54961998 None:intergenic 20.0%
!! TTCAAACTTAATCTAAGAAT+TGG - chr2_1:54962207-54962226 Msa0212800:intron 20.0%
!! ACATTAACATTTCATAAAGA+TGG + chr2_1:54962256-54962275 None:intergenic 20.0%
!!! TCTGTTAACTTTAAATTTTG+TGG - chr2_1:54962412-54962431 Msa0212800:intron 20.0%
!! GGCAATTAAAATAATCAAAA+TGG - chr2_1:54962736-54962755 Msa0212800:intron 20.0%
! AAAAAAGCGAAGAATGAATT+CGG + chr2_1:54957464-54957483 None:intergenic 25.0%
! AAAATACAAATAGATGGAAG+TGG - chr2_1:54957543-54957562 Msa0212800:three_prime_UTR 25.0%
! AAGAAAAATTACCTTAACCA+TGG + chr2_1:54957663-54957682 None:intergenic 25.0%
!! TAATGAGTTGGATACAAATA+TGG - chr2_1:54958095-54958114 Msa0212800:intron 25.0%
! AATTATTTGGCACACAAAAA+AGG + chr2_1:54958262-54958281 None:intergenic 25.0%
!!! TTTTTTGTGTGCCAAATAAT+TGG - chr2_1:54958261-54958280 Msa0212800:intron 25.0%
!! AAAGATTGGTTATTGCTAAA+CGG - chr2_1:54958293-54958312 Msa0212800:intron 25.0%
!!! CATTTGTTTTAAGAGAGATA+AGG - chr2_1:54958639-54958658 Msa0212800:three_prime_UTR 25.0%
!!! TTTGTTTTAAGAGAGATAAG+GGG - chr2_1:54958641-54958660 Msa0212800:three_prime_UTR 25.0%
! TATATTTCGAACAATGCAAA+TGG + chr2_1:54959033-54959052 None:intergenic 25.0%
!! ACAGAAGATTGAATATTTTG+TGG - chr2_1:54959067-54959086 Msa0212800:CDS 25.0%
!!! ATGTTTTTTGTTTTGTTGAG+GGG + chr2_1:54959275-54959294 None:intergenic 25.0%
! GACAAAAGTAAATGTTTGTT+AGG + chr2_1:54959534-54959553 None:intergenic 25.0%
! TTTCAATTAGAAGATTAAGG+AGG + chr2_1:54959776-54959795 None:intergenic 25.0%
! TTAGAAATATAATCAGTGGT+AGG + chr2_1:54960103-54960122 None:intergenic 25.0%
! TGTGAGGAAATATAATTACA+TGG + chr2_1:54960308-54960327 None:intergenic 25.0%
! TGTATTATCTGATATACTGA+AGG - chr2_1:54960337-54960356 Msa0212800:intron 25.0%
! CAGGGATAATATATAATCTA+GGG + chr2_1:54960399-54960418 None:intergenic 25.0%
! TCAGGGATAATATATAATCT+AGG + chr2_1:54960400-54960419 None:intergenic 25.0%
!! CATATGAACAATAACTTTTC+AGG + chr2_1:54960418-54960437 None:intergenic 25.0%
! GTAATGATATTCATGTAGAA+AGG - chr2_1:54960564-54960583 Msa0212800:CDS 25.0%
!!! TCCAATGTTGTCTTATTTTA+TGG - chr2_1:54960665-54960684 Msa0212800:intron 25.0%
! ACCATAAAATAAGACAACAT+TGG + chr2_1:54960669-54960688 None:intergenic 25.0%
!!! TTGTCTTATTTTATGGTATG+TGG - chr2_1:54960672-54960691 Msa0212800:intron 25.0%
!!! TGTCTTATTTTATGGTATGT+GGG - chr2_1:54960673-54960692 Msa0212800:intron 25.0%
!!! TCCTTTTGGAAAATTCATTT+GGG + chr2_1:54960886-54960905 None:intergenic 25.0%
!!! ATCCTTTTGGAAAATTCATT+TGG + chr2_1:54960887-54960906 None:intergenic 25.0%
!! AATGAATTTTCCAAAAGGAT+TGG - chr2_1:54960887-54960906 Msa0212800:intron 25.0%
!! ATGAATTTTCCAAAAGGATT+GGG - chr2_1:54960888-54960907 Msa0212800:intron 25.0%
!!! GAAATAACAGATTGTTTTGT+TGG - chr2_1:54961055-54961074 Msa0212800:intron 25.0%
! TATAGATATCTAGAAGAATC+TGG + chr2_1:54961351-54961370 None:intergenic 25.0%
! AGATTCTTCTAGATATCTAT+AGG - chr2_1:54961350-54961369 Msa0212800:CDS 25.0%
! CTATAAACTGGATAATAGAA+TGG + chr2_1:54961568-54961587 None:intergenic 25.0%
! AAAATGACAAGTCAATAAAC+TGG + chr2_1:54961612-54961631 None:intergenic 25.0%
!!! AGTTTATTGACTTGTCATTT+TGG - chr2_1:54961611-54961630 Msa0212800:CDS 25.0%
!!! GTTTATTGACTTGTCATTTT+GGG - chr2_1:54961612-54961631 Msa0212800:CDS 25.0%
!! ATAATGGAAGCTAAATTGAA+TGG - chr2_1:54961750-54961769 Msa0212800:intron 25.0%
! TAATGGAAGCTAAATTGAAT+GGG - chr2_1:54961751-54961770 Msa0212800:intron 25.0%
! CTCATGAAAATTTAAGAACA+TGG - chr2_1:54962021-54962040 Msa0212800:intron 25.0%
! TTTATATCTTATCTTGACCA+GGG - chr2_1:54962068-54962087 Msa0212800:intron 25.0%
! CATCAAAAATCAAAAGCAAA+GGG + chr2_1:54962295-54962314 None:intergenic 25.0%
! TCATCAAAAATCAAAAGCAA+AGG + chr2_1:54962296-54962315 None:intergenic 25.0%
!! ATTTTCAACCAAATTCGTTT+GGG - chr2_1:54962325-54962344 Msa0212800:intron 25.0%
! ATCCTTAAAAATTAGAAGCA+AGG - chr2_1:54962350-54962369 Msa0212800:intron 25.0%
!! ATCCTTGCTTCTAATTTTTA+AGG + chr2_1:54962355-54962374 None:intergenic 25.0%
! GGACAATTTCTCATAAAAAA+TGG + chr2_1:54962381-54962400 None:intergenic 25.0%
! GACTGCAATAATAAATAACA+AGG + chr2_1:54962469-54962488 None:intergenic 25.0%
!!! TTATAAAGGTTGATATTAGC+TGG - chr2_1:54962498-54962517 Msa0212800:intron 25.0%
!!! TATAAAGGTTGATATTAGCT+GGG - chr2_1:54962499-54962518 Msa0212800:intron 25.0%
!! CATTGATTAAACTAGTACAT+TGG - chr2_1:54962525-54962544 Msa0212800:intron 25.0%
! TTCGAAAAACTTCATATTCT+AGG + chr2_1:54963074-54963093 None:intergenic 25.0%
! GCTATGTTACAGTTTATATT+AGG - chr2_1:54963118-54963137 Msa0212800:five_prime_UTR 25.0%
!! TCAAATTGGTTGATGATTGA+TGG - chr2_1:54957216-54957235 Msa0212800:three_prime_UTR 30.0%
TACAGTTATGATTCATTCGA+CGG - chr2_1:54957309-54957328 Msa0212800:three_prime_UTR 30.0%
!!! CACTTATTTTATTCTCGTGT+TGG + chr2_1:54957707-54957726 None:intergenic 30.0%
! ATGTTGTGGATTTTATCGTA+AGG - chr2_1:54957834-54957853 Msa0212800:three_prime_UTR 30.0%
ATAGTTCAAAGTTCAAACGA+TGG + chr2_1:54958140-54958159 None:intergenic 30.0%
CAATAACCAATCTTTGTTAG+GGG + chr2_1:54958288-54958307 None:intergenic 30.0%
GCAATAACCAATCTTTGTTA+GGG + chr2_1:54958289-54958308 None:intergenic 30.0%
AGCAATAACCAATCTTTGTT+AGG + chr2_1:54958290-54958309 None:intergenic 30.0%
CAAAAGTCATCCTAATTTCA+TGG + chr2_1:54958585-54958604 None:intergenic 30.0%
TTGCTTATAAATAAGGCTAG+AGG - chr2_1:54958602-54958621 Msa0212800:three_prime_UTR 30.0%
TGCTTATAAATAAGGCTAGA+GGG - chr2_1:54958603-54958622 Msa0212800:three_prime_UTR 30.0%
!!! TTGTTTTAAGAGAGATAAGG+GGG - chr2_1:54958642-54958661 Msa0212800:three_prime_UTR 30.0%
GGGCTTATTATAGTTGAATT+TGG - chr2_1:54958663-54958682 Msa0212800:three_prime_UTR 30.0%
AATATGTGCTTTACTTCATC+AGG - chr2_1:54958722-54958741 Msa0212800:three_prime_UTR 30.0%
!!! ATATTTTGGGAGCATTGTTA+TGG - chr2_1:54958757-54958776 Msa0212800:three_prime_UTR 30.0%
! GATTGAATATTTTGTGGAGA+TGG - chr2_1:54959073-54959092 Msa0212800:CDS 30.0%
GTTCAACATCATTACAAACA+GGG + chr2_1:54959145-54959164 None:intergenic 30.0%
AGTTCAACATCATTACAAAC+AGG + chr2_1:54959146-54959165 None:intergenic 30.0%
TAGTCTAAGTAATTGACACA+AGG + chr2_1:54959300-54959319 None:intergenic 30.0%
ATTTCTACAAATGATTGTGC+AGG - chr2_1:54959390-54959409 Msa0212800:CDS 30.0%
!! TTAAAAGTGATGGATTTGTG+TGG - chr2_1:54959579-54959598 Msa0212800:CDS 30.0%
! TTGTTGATGCCATAATTTGT+GGG - chr2_1:54959610-54959629 Msa0212800:CDS 30.0%
! ATAGTTGTTCTCAATCCTTT+TGG + chr2_1:54959658-54959677 None:intergenic 30.0%
AAAAGGATTGAGAACAACTA+TGG - chr2_1:54959657-54959676 Msa0212800:CDS 30.0%
! ATGGATATTTGTTTCTCCAA+TGG + chr2_1:54959831-54959850 None:intergenic 30.0%
ATTGGAGAAACAAATATCCA+TGG - chr2_1:54959830-54959849 Msa0212800:CDS 30.0%
GAAACAAATATCCATGGTAA+AGG - chr2_1:54959836-54959855 Msa0212800:CDS 30.0%
AGAAATTTGCACAACATCAA+TGG + chr2_1:54960160-54960179 None:intergenic 30.0%
TTGTGGATGCAATTCAAAAA+TGG - chr2_1:54960201-54960220 Msa0212800:intron 30.0%
!! CAGCATCATTTTGATATATC+CGG + chr2_1:54960229-54960248 None:intergenic 30.0%
! GATGCTGATGATAATTTTCA+AGG - chr2_1:54960242-54960261 Msa0212800:intron 30.0%
ATGATACATCTTTGATACTG+TGG + chr2_1:54960494-54960513 None:intergenic 30.0%
TGCAAACTGTATTCCATAAA+AGG - chr2_1:54960606-54960625 Msa0212800:CDS 30.0%
!!! GTCTTATTTTATGGTATGTG+GGG - chr2_1:54960674-54960693 Msa0212800:intron 30.0%
! TCCCAAATGAATTTTCCAAA+AGG - chr2_1:54960882-54960901 Msa0212800:intron 30.0%
!! TGAAGCATTGATGTTATTGT+TGG - chr2_1:54961120-54961139 Msa0212800:intron 30.0%
TTGGAATATGTATATTTGGG+AGG - chr2_1:54961139-54961158 Msa0212800:intron 30.0%
GATGAAGTAAGATTAAAGCT+GGG + chr2_1:54961283-54961302 None:intergenic 30.0%
AGATGAAGTAAGATTAAAGC+TGG + chr2_1:54961284-54961303 None:intergenic 30.0%
!!! ACAGCTGTTTTTCTATAAAC+TGG + chr2_1:54961580-54961599 None:intergenic 30.0%
!! GTCATTTTGGGTAAAGTTAA+CGG - chr2_1:54961624-54961643 Msa0212800:CDS 30.0%
! TGTTTTCAGAGATGTCATAA+TGG - chr2_1:54961734-54961753 Msa0212800:intron 30.0%
TCTGGATGTGATTATTTACA+GGG - chr2_1:54961846-54961865 Msa0212800:intron 30.0%
TCTTTGCCTATTATTTAAGC+TGG - chr2_1:54961996-54962015 Msa0212800:intron 30.0%
TGAGTTCCAGCTTAAATAAT+AGG + chr2_1:54962005-54962024 None:intergenic 30.0%
GTTTATATCTTATCTTGACC+AGG - chr2_1:54962067-54962086 Msa0212800:intron 30.0%
AGTATTGTTTGGAAACTCAT+TGG - chr2_1:54962162-54962181 Msa0212800:intron 30.0%
! ACATTTCATAAAGATGGACT+TGG + chr2_1:54962250-54962269 None:intergenic 30.0%
! TTGATTTTTGATGAGAAGCA+AGG - chr2_1:54962302-54962321 Msa0212800:intron 30.0%
! GATTTTCAACCAAATTCGTT+TGG - chr2_1:54962324-54962343 Msa0212800:intron 30.0%
CAGTCATTCACAAGTTATAA+AGG - chr2_1:54962484-54962503 Msa0212800:intron 30.0%
TCCTTCATATAGGCAATTAA+GGG - chr2_1:54962811-54962830 Msa0212800:CDS 30.0%
CAATAGAAGCGGAATAAATA+AGG + chr2_1:54962877-54962896 None:intergenic 30.0%
ATGGTTAAGTTCAATAGAAG+CGG + chr2_1:54962888-54962907 None:intergenic 30.0%
TCTATTGAACTTAACCATGA+AGG - chr2_1:54962890-54962909 Msa0212800:intron 30.0%
! GGTGTGTTGTAAAATTTTGT+AGG - chr2_1:54962972-54962991 Msa0212800:CDS 30.0%
!!! AATCCTTATTTTGAGCTGTT+AGG - chr2_1:54963096-54963115 Msa0212800:five_prime_UTR 30.0%
CAAGAAAAGCAGCAATTGAT+CGG + chr2_1:54957604-54957623 None:intergenic 35.0%
TTAGAGAAACACATCTCATG+TGG - chr2_1:54957804-54957823 Msa0212800:three_prime_UTR 35.0%
! TTGTGGATTTTATCGTAAGG+AGG - chr2_1:54957837-54957856 Msa0212800:three_prime_UTR 35.0%
! TGTGGATTTTATCGTAAGGA+GGG - chr2_1:54957838-54957857 Msa0212800:three_prime_UTR 35.0%
TTTCTCTTACAAACCCACTT+GGG + chr2_1:54958053-54958072 None:intergenic 35.0%
ATGCTTTATCCCACTAAACA+GGG + chr2_1:54958171-54958190 None:intergenic 35.0%
! CATGGTTGTTGTTATTGCTT+AGG - chr2_1:54958188-54958207 Msa0212800:intron 35.0%
TTGTTAGGGGTCCAATTATT+TGG + chr2_1:54958275-54958294 None:intergenic 35.0%
! GTGACTTTTGCTTATGTTTG+AGG - chr2_1:54958559-54958578 Msa0212800:three_prime_UTR 35.0%
! ATGTTTGAGGCCATGAAATT+AGG - chr2_1:54958572-54958591 Msa0212800:three_prime_UTR 35.0%
!!! TGTTTTAAGAGAGATAAGGG+GGG - chr2_1:54958643-54958662 Msa0212800:three_prime_UTR 35.0%
! ATAGTTGAATTTGGCCTTCT+TGG - chr2_1:54958672-54958691 Msa0212800:three_prime_UTR 35.0%
ATAGATTACATCAGCCAAGA+AGG + chr2_1:54958689-54958708 None:intergenic 35.0%
! GAATCTGCTGCTGATATTTT+GGG - chr2_1:54958744-54958763 Msa0212800:three_prime_UTR 35.0%
TTTGATGCCATGCTTAACAA+GGG + chr2_1:54958804-54958823 None:intergenic 35.0%
ATTTGATGCCATGCTTAACA+AGG + chr2_1:54958805-54958824 None:intergenic 35.0%
TAGACAAGATCCAACAAACA+CGG + chr2_1:54958873-54958892 None:intergenic 35.0%
AAATTCAAAGCAGTAGCACA+AGG + chr2_1:54958942-54958961 None:intergenic 35.0%
! TTGTGCTACTGCTTTGAATT+TGG - chr2_1:54958941-54958960 Msa0212800:exon 35.0%
GTTCGAAATATAAAAGACCG+CGG - chr2_1:54959041-54959060 Msa0212800:CDS 35.0%
! TTTTGAGCACAATTCTGTTG+AGG - chr2_1:54959102-54959121 Msa0212800:CDS 35.0%
CTAAAGCTGTACACATCTTT+AGG - chr2_1:54959224-54959243 Msa0212800:CDS 35.0%
!!! TTTTTGTTTTGTTGAGGGGA+AGG + chr2_1:54959271-54959290 None:intergenic 35.0%
TGTAGCACAAAAGCTTATAG+AGG - chr2_1:54959357-54959376 Msa0212800:CDS 35.0%
AATCTAACCCTCATGATGTT+CGG - chr2_1:54959422-54959441 Msa0212800:CDS 35.0%
CTTGTTGATGCCATAATTTG+TGG - chr2_1:54959609-54959628 Msa0212800:CDS 35.0%
!!! TTCTCAATCCTTTTGGAACA+CGG + chr2_1:54959651-54959670 None:intergenic 35.0%
! CAACTATGGTTCTGTATTAG+TGG - chr2_1:54959671-54959690 Msa0212800:CDS 35.0%
! ATTAGTGGAAGCATGTAAGT+TGG - chr2_1:54959686-54959705 Msa0212800:CDS 35.0%
! GCAATCATCATATCAGGTTT+TGG - chr2_1:54959730-54959749 Msa0212800:CDS 35.0%
!!! CATATCAGGTTTTGGAAACA+AGG - chr2_1:54959738-54959757 Msa0212800:CDS 35.0%
GCAAAACAATTTCGGAAGAT+TGG + chr2_1:54959809-54959828 None:intergenic 35.0%
!! TTCCGAAATTGTTTTGCCAT+TGG - chr2_1:54959812-54959831 Msa0212800:CDS 35.0%
CTCCAATGGCAAAACAATTT+CGG + chr2_1:54959817-54959836 None:intergenic 35.0%
ACAAATATCCATGGTAAAGG+AGG - chr2_1:54959839-54959858 Msa0212800:CDS 35.0%
CAAATATCCATGGTAAAGGA+GGG - chr2_1:54959840-54959859 Msa0212800:CDS 35.0%
TCAATTATCATGTTGCTCTG+AGG - chr2_1:54959871-54959890 Msa0212800:CDS 35.0%
GATATGAAGTTCACTCTCAT+GGG + chr2_1:54959967-54959986 None:intergenic 35.0%
TGATATGAAGTTCACTCTCA+TGG + chr2_1:54959968-54959987 None:intergenic 35.0%
CTTCAAGTGTGTGTATACAT+TGG - chr2_1:54960046-54960065 Msa0212800:CDS 35.0%
AAATGTGAAGCTGCAGAAAA+AGG + chr2_1:54960183-54960202 None:intergenic 35.0%
ATGCAATTCAAAAATGGTGC+CGG - chr2_1:54960207-54960226 Msa0212800:intron 35.0%
ATTAAAACAGCCCTTGATAC+TGG + chr2_1:54960272-54960291 None:intergenic 35.0%
TAATACAGATCTAGCATGTG+AGG + chr2_1:54960324-54960343 None:intergenic 35.0%
TCTGATATACTGAAGGTCAT+AGG - chr2_1:54960344-54960363 Msa0212800:intron 35.0%
AGATGTATCATAGAAAGCAG+AGG - chr2_1:54960503-54960522 Msa0212800:CDS 35.0%
GATGTATCATAGAAAGCAGA+GGG - chr2_1:54960504-54960523 Msa0212800:CDS 35.0%
TGGAATACAGTTTGCAAATG+AGG + chr2_1:54960602-54960621 None:intergenic 35.0%
GCAAAGGAATGTCTAGTAAA+AGG + chr2_1:54960727-54960746 None:intergenic 35.0%
TCCTTTGCAATTTAGTAGAG+AGG - chr2_1:54960739-54960758 Msa0212800:CDS 35.0%
ACCTCTCTACTAAATTGCAA+AGG + chr2_1:54960743-54960762 None:intergenic 35.0%
GATTGGGAACTCTCTTAATA+AGG - chr2_1:54960904-54960923 Msa0212800:intron 35.0%
AATAACACCATGAACACTCA+CGG + chr2_1:54960972-54960991 None:intergenic 35.0%
GTAAGATTAAAGCTGGGAAA+AGG + chr2_1:54961277-54961296 None:intergenic 35.0%
!!! GCTGGAAGTTATTTTTCGTA+TGG - chr2_1:54961313-54961332 Msa0212800:CDS 35.0%
AAGCTACTCAAGTATATGGA+AGG + chr2_1:54961437-54961456 None:intergenic 35.0%
AAGGAAGCTACTCAAGTATA+TGG + chr2_1:54961441-54961460 None:intergenic 35.0%
ATAAGAGTTGCGTTTCTGAA+AGG - chr2_1:54961499-54961518 Msa0212800:CDS 35.0%
TCTGAAAGGACTGTTAAACT+TGG - chr2_1:54961513-54961532 Msa0212800:CDS 35.0%
ACTTTGTGAACATGCATATG+TGG + chr2_1:54961816-54961835 None:intergenic 35.0%
CACAAAGTTATATTGCAGTC+TGG - chr2_1:54961828-54961847 Msa0212800:intron 35.0%
GTCTGGATGTGATTATTTAC+AGG - chr2_1:54961845-54961864 Msa0212800:intron 35.0%
ATCTTCATCACTCGTTTATC+AGG + chr2_1:54961952-54961971 None:intergenic 35.0%
AAGGATATCCCAAACGAATT+TGG + chr2_1:54962336-54962355 None:intergenic 35.0%
ATTCAATTTGCAGCCATATG+TGG - chr2_1:54962619-54962638 Msa0212800:intron 35.0%
!!! CTGGATTTTGGAAAGTATTC+AGG - chr2_1:54962664-54962683 Msa0212800:intron 35.0%
TCTTGATTCTTCTAAGCAGT+TGG - chr2_1:54962715-54962734 Msa0212800:intron 35.0%
CTCCTTCATATAGGCAATTA+AGG - chr2_1:54962810-54962829 Msa0212800:CDS 35.0%
TCCCTTAATTGCCTATATGA+AGG + chr2_1:54962815-54962834 None:intergenic 35.0%
!! TAAAGCGTTTTTCACCTTCA+TGG + chr2_1:54962907-54962926 None:intergenic 35.0%
ATGAAGGTGAAAAACGCTTT+AGG - chr2_1:54962906-54962925 Msa0212800:intron 35.0%
! TTTTACGATGCAGAAGATTC+AGG - chr2_1:54962951-54962970 Msa0212800:intron 35.0%
TAGCCTAACAGCTCAAAATA+AGG + chr2_1:54963102-54963121 None:intergenic 35.0%
GGTAACTGTTACAGTTAGTT+AGG - chr2_1:54963139-54963158 Msa0212800:five_prime_UTR 35.0%
GATTATCAACTCTCTCTCGA+CGG - chr2_1:54957275-54957294 Msa0212800:three_prime_UTR 40.0%
GGTTTAAGGAATGGAGAAGA+CGG + chr2_1:54957411-54957430 None:intergenic 40.0%
CTTCTCCATTCCTTAAACCT+TGG - chr2_1:54957412-54957431 Msa0212800:three_prime_UTR 40.0%
TAGCTCAGTGAAATTAGCAC+TGG - chr2_1:54957960-54957979 Msa0212800:intron 40.0%
AGCTCAGTGAAATTAGCACT+GGG - chr2_1:54957961-54957980 Msa0212800:intron 40.0%
GTTTCTCTTACAAACCCACT+TGG + chr2_1:54958054-54958073 None:intergenic 40.0%
CATGCTTTATCCCACTAAAC+AGG + chr2_1:54958172-54958191 None:intergenic 40.0%
CTGTTTAGTGGGATAAAGCA+TGG - chr2_1:54958170-54958189 Msa0212800:intron 40.0%
!! TTGCTCCCTAGTTTTTGCTA+TGG - chr2_1:54958213-54958232 Msa0212800:intron 40.0%
GCTCTCCATAGCAAAAACTA+GGG + chr2_1:54958221-54958240 None:intergenic 40.0%
ATTGGACCCCTAACAAAGAT+TGG - chr2_1:54958279-54958298 Msa0212800:intron 40.0%
! GATTGGTTATTGCTAAACGG+CGG - chr2_1:54958296-54958315 Msa0212800:intron 40.0%
! GGAATCTGCTGCTGATATTT+TGG - chr2_1:54958743-54958762 Msa0212800:three_prime_UTR 40.0%
AAATGAGCCCTTGTTAAGCA+TGG - chr2_1:54958794-54958813 Msa0212800:three_prime_UTR 40.0%
GTTAAGCATGGCATCAAATG+TGG - chr2_1:54958806-54958825 Msa0212800:three_prime_UTR 40.0%
AACAAACACGGTTGCAATAG+TGG + chr2_1:54958861-54958880 None:intergenic 40.0%
ACTATTGCAACCGTGTTTGT+TGG - chr2_1:54958860-54958879 Msa0212800:three_prime_UTR 40.0%
TGCAACTTCTACTTGATGTG+AGG + chr2_1:54958916-54958935 None:intergenic 40.0%
TCTGAGTGCTACAAGTGAAA+AGG - chr2_1:54958974-54958993 Msa0212800:CDS 40.0%
GCACAAAAGCTTATAGAGGA+TGG - chr2_1:54959361-54959380 Msa0212800:CDS 40.0%
CTCTCTCATCCCACAAATTA+TGG + chr2_1:54959622-54959641 None:intergenic 40.0%
! AGTTGGCTCAAATTACTCGT+TGG - chr2_1:54959703-54959722 Msa0212800:CDS 40.0%
! GTTGGCTCAAATTACTCGTT+GGG - chr2_1:54959704-54959723 Msa0212800:CDS 40.0%
TCTCATGGGTATAACTACAG+GGG + chr2_1:54959953-54959972 None:intergenic 40.0%
CTCTCATGGGTATAACTACA+GGG + chr2_1:54959954-54959973 None:intergenic 40.0%
ACTCTCATGGGTATAACTAC+AGG + chr2_1:54959955-54959974 None:intergenic 40.0%
! ACTTACTGATTACGTGTGCA+TGG - chr2_1:54959988-54960007 Msa0212800:CDS 40.0%
TCAGTGGTAGGAAGAAACTA+AGG + chr2_1:54960091-54960110 None:intergenic 40.0%
GCACAACATCAATGGAATGA+AGG + chr2_1:54960152-54960171 None:intergenic 40.0%
TTTCTGCAGCTTCACATTTG+TGG - chr2_1:54960184-54960203 Msa0212800:CDS 40.0%
TTCAAGGTGAACCAGTATCA+AGG - chr2_1:54960258-54960277 Msa0212800:intron 40.0%
TCAAGGTGAACCAGTATCAA+GGG - chr2_1:54960259-54960278 Msa0212800:intron 40.0%
TATTCATGTAGAAAGGCCAG+AGG - chr2_1:54960571-54960590 Msa0212800:CDS 40.0%
!! TCCATAAAAGGTCTTGTTGC+TGG - chr2_1:54960618-54960637 Msa0212800:CDS 40.0%
! TCCAGCAACAAGACCTTTTA+TGG + chr2_1:54960622-54960641 None:intergenic 40.0%
!! AAAAGGTCTTGTTGCTGGAT+TGG - chr2_1:54960623-54960642 Msa0212800:CDS 40.0%
!! TCTTGTTGCTGGATTGGTAA+AGG - chr2_1:54960629-54960648 Msa0212800:CDS 40.0%
GAAACATACCATTTCACTCC+AGG + chr2_1:54960830-54960849 None:intergenic 40.0%
! AAGAGAGTTCCCAATCCTTT+TGG + chr2_1:54960900-54960919 None:intergenic 40.0%
TTGCGACTCATTGTAGCAAA+TGG - chr2_1:54960941-54960960 Msa0212800:CDS 40.0%
TGCGACTCATTGTAGCAAAT+GGG - chr2_1:54960942-54960961 Msa0212800:CDS 40.0%
CTACTAGATAGCACTTCTGA+AGG + chr2_1:54961022-54961041 None:intergenic 40.0%
TTTGCAGACAATCTCCAAAG+TGG - chr2_1:54961245-54961264 Msa0212800:CDS 40.0%
TTGCAGACAATCTCCAAAGT+GGG - chr2_1:54961246-54961265 Msa0212800:CDS 40.0%
ACTTCATCTCTTGATTCAGC+TGG - chr2_1:54961295-54961314 Msa0212800:CDS 40.0%
! GCTAAATTGAATGGGCTTGT+TGG - chr2_1:54961759-54961778 Msa0212800:intron 40.0%
!! AATTGAATGGGCTTGTTGGA+TGG - chr2_1:54961763-54961782 Msa0212800:intron 40.0%
!! ATTGAATGGGCTTGTTGGAT+GGG - chr2_1:54961764-54961783 Msa0212800:intron 40.0%
TGAACATGCATATGTGGTAC+TGG + chr2_1:54961810-54961829 None:intergenic 40.0%
! TTACAGGGTTTGTTCAGATC+AGG - chr2_1:54961861-54961880 Msa0212800:intron 40.0%
ACCTGTTCTGTGGTTGATTA+AGG - chr2_1:54962099-54962118 Msa0212800:intron 40.0%
AGTTAACAGAGCACAAGAGA+TGG + chr2_1:54962402-54962421 None:intergenic 40.0%
TAACCCACAAACAACCAGAA+GGG + chr2_1:54962577-54962596 None:intergenic 40.0%
TTAACCCACAAACAACCAGA+AGG + chr2_1:54962578-54962597 None:intergenic 40.0%
! TGGTTGTTTGTGGGTTAACA+TGG - chr2_1:54962580-54962599 Msa0212800:intron 40.0%
! AAAGTATTCAGGAAGCTTGC+TGG - chr2_1:54962675-54962694 Msa0212800:intron 40.0%
CTTCCACAAAGAGAGCTTAT+AGG + chr2_1:54962762-54962781 None:intergenic 40.0%
TAAGCTCTCTTTGTGGAAGT+TGG - chr2_1:54962763-54962782 Msa0212800:intron 40.0%
GTCTCATAGCTCCTTCATAT+AGG - chr2_1:54962801-54962820 Msa0212800:intron 40.0%
GATTCATTCGACGGTGAAAG+CGG - chr2_1:54957318-54957337 Msa0212800:three_prime_UTR 45.0%
! TGGTGCCAAGGTTTAAGGAA+TGG + chr2_1:54957420-54957439 None:intergenic 45.0%
ATTCCTTAAACCTTGGCACC+AGG - chr2_1:54957419-54957438 Msa0212800:three_prime_UTR 45.0%
CTTAACCATGGTATGACGTG+TGG + chr2_1:54957651-54957670 None:intergenic 45.0%
CACACGTCATACCATGGTTA+AGG - chr2_1:54957649-54957668 Msa0212800:three_prime_UTR 45.0%
GGTCAAATCGCTAGAAGTAG+AGG - chr2_1:54957878-54957897 Msa0212800:three_prime_UTR 45.0%
GAATCGAACTTGAGACCATC+AGG - chr2_1:54957985-54958004 Msa0212800:intron 45.0%
TCTTACAAACCCACTTGGGT+TGG + chr2_1:54958049-54958068 None:intergenic 45.0%
ATATAGCCAGCCCTGTTTAG+TGG - chr2_1:54958158-54958177 Msa0212800:intron 45.0%
TATAGCCAGCCCTGTTTAGT+GGG - chr2_1:54958159-54958178 Msa0212800:intron 45.0%
TTTATCCCACTAAACAGGGC+TGG + chr2_1:54958167-54958186 None:intergenic 45.0%
GGCTCTCCATAGCAAAAACT+AGG + chr2_1:54958222-54958241 None:intergenic 45.0%
! TTTGCTATGGAGAGCCTAAC+TGG - chr2_1:54958226-54958245 Msa0212800:intron 45.0%
TTGCTATGGAGAGCCTAACT+GGG - chr2_1:54958227-54958246 Msa0212800:intron 45.0%
TACTTGATGTGAGGACAGCA+AGG + chr2_1:54958907-54958926 None:intergenic 45.0%
ATTCAATCTTCTGTGCACCG+CGG + chr2_1:54959061-54959080 None:intergenic 45.0%
TGAGCACAATTCTGTTGAGG+TGG - chr2_1:54959105-54959124 Msa0212800:CDS 45.0%
CAAACAGGGAACCTAGATGA+AGG + chr2_1:54959131-54959150 None:intergenic 45.0%
GTTGAGGGGAAGGTAAAAGA+TGG + chr2_1:54959261-54959280 None:intergenic 45.0%
ACAAATGATTGTGCAGGCGA+TGG - chr2_1:54959396-54959415 Msa0212800:CDS 45.0%
CAAATGATTGTGCAGGCGAT+GGG - chr2_1:54959397-54959416 Msa0212800:CDS 45.0%
CCTCTATCCGAACATCATGA+GGG + chr2_1:54959432-54959451 None:intergenic 45.0%
CCTCATGATGTTCGGATAGA+GGG - chr2_1:54959430-54959449 Msa0212800:CDS 45.0%
CTCATGATGTTCGGATAGAG+GGG - chr2_1:54959431-54959450 Msa0212800:CDS 45.0%
ATGTTCGGATAGAGGGGTTT+CGG - chr2_1:54959437-54959456 Msa0212800:CDS 45.0%
! TCGGCTTGCTCAATGTCTAT+TGG - chr2_1:54959456-54959475 Msa0212800:CDS 45.0%
ATTTGTGGGATGAGAGAGAC+AGG - chr2_1:54959624-54959643 Msa0212800:CDS 45.0%
TTTGTGGGATGAGAGAGACA+GGG - chr2_1:54959625-54959644 Msa0212800:CDS 45.0%
TTTCAGTCCCTCCTTTACCA+TGG + chr2_1:54959850-54959869 None:intergenic 45.0%
!! TTGCTCTGAGGAGTTATGTG+TGG - chr2_1:54959883-54959902 Msa0212800:CDS 45.0%
!! TGCTCTGAGGAGTTATGTGT+GGG - chr2_1:54959884-54959903 Msa0212800:CDS 45.0%
AGTTATGTGTGGGACGTTCT+TGG - chr2_1:54959894-54959913 Msa0212800:CDS 45.0%
GTTATGTGTGGGACGTTCTT+GGG - chr2_1:54959895-54959914 Msa0212800:CDS 45.0%
GGGTGGCTTACAATTCATTG+TGG - chr2_1:54959915-54959934 Msa0212800:CDS 45.0%
!! CTGGATTGGTAAAGGAGACT+GGG - chr2_1:54960637-54960656 Msa0212800:CDS 45.0%
ATTGGTAAAGGAGACTGGGA+AGG - chr2_1:54960641-54960660 Msa0212800:intron 45.0%
TTTCACTCCAGGACTGAAAG+AGG + chr2_1:54960819-54960838 None:intergenic 45.0%
CTTTCAGTCCTGGAGTGAAA+TGG - chr2_1:54960819-54960838 Msa0212800:CDS 45.0%
GCGACTCATTGTAGCAAATG+GGG - chr2_1:54960943-54960962 Msa0212800:CDS 45.0%
! ACTTCTGAAGGTAGAAGTGC+TGG + chr2_1:54961010-54961029 None:intergenic 45.0%
! CTGCAAAGCATTTGCAAGAG+AGG + chr2_1:54961232-54961251 None:intergenic 45.0%
TGCAGACAATCTCCAAAGTG+GGG - chr2_1:54961247-54961266 Msa0212800:CDS 45.0%
TCAGATCAGGAATGCAAGAG+AGG - chr2_1:54961874-54961893 Msa0212800:intron 45.0%
AGAACAGGTTACATAGACCC+TGG + chr2_1:54962088-54962107 None:intergenic 45.0%
GGTCTATGTAACCTGTTCTG+TGG - chr2_1:54962089-54962108 Msa0212800:intron 45.0%
GCCTTAATCAACCACAGAAC+AGG + chr2_1:54962103-54962122 None:intergenic 45.0%
AGAATTGGCTGAAAGCTAGC+TGG - chr2_1:54962222-54962241 Msa0212800:intron 45.0%
AAACAACCAGAAGGGGGATT+TGG + chr2_1:54962569-54962588 None:intergenic 45.0%
AACCCACAAACAACCAGAAG+GGG + chr2_1:54962576-54962595 None:intergenic 45.0%
! AGCCATATGTGGAGCTTTGT+TGG - chr2_1:54962630-54962649 Msa0212800:intron 45.0%
AGCCAACAAAGCTCCACATA+TGG + chr2_1:54962635-54962654 None:intergenic 45.0%
!! TATGTGGAGCTTTGTTGGCT+TGG - chr2_1:54962635-54962654 Msa0212800:intron 45.0%
!! TTTGTTGGCTTGGTGAGTTC+TGG - chr2_1:54962645-54962664 Msa0212800:intron 45.0%
!!! GCTTGGTGAGTTCTGGATTT+TGG - chr2_1:54962652-54962671 Msa0212800:intron 45.0%
TGGCCTATAAGCTCTCTTTG+TGG - chr2_1:54962756-54962775 Msa0212800:intron 45.0%
TTCTGCAAAGTCCTGTCAGT+AGG - chr2_1:54963178-54963197 Msa0212800:five_prime_UTR 45.0%
! TTTTCTTGCAGCCTACTGAC+AGG + chr2_1:54963192-54963211 None:intergenic 45.0%
AGTAGGCTGCAAGAAAAGCT+TGG - chr2_1:54963195-54963214 Msa0212800:five_prime_UTR 45.0%
GTAGGCTGCAAGAAAAGCTT+GGG - chr2_1:54963196-54963215 Msa0212800:five_prime_UTR 45.0%
ATGGAGAAGACGGCGATGAA+GGG + chr2_1:54957401-54957420 None:intergenic 50.0%
AATGGAGAAGACGGCGATGA+AGG + chr2_1:54957402-54957421 None:intergenic 50.0%
! AGACCTGGTGCCAAGGTTTA+AGG + chr2_1:54957425-54957444 None:intergenic 50.0%
CATGTGGTCTCGACATGTTG+TGG - chr2_1:54957820-54957839 Msa0212800:three_prime_UTR 50.0%
TCGAACTTGAGACCATCAGG+AGG - chr2_1:54957988-54958007 Msa0212800:intron 50.0%
ATAGAGTGAGCTCCTCCTGA+TGG + chr2_1:54958003-54958022 None:intergenic 50.0%
ATCAGGAGGAGCTCACTCTA+TGG - chr2_1:54958002-54958021 Msa0212800:intron 50.0%
! TGGCTGGGAGATGTTAGCTT+GGG + chr2_1:54958029-54958048 None:intergenic 50.0%
TTGGCTGGGAGATGTTAGCT+TGG + chr2_1:54958030-54958049 None:intergenic 50.0%
!! CACGGTTGCAATAGTGGACT+CGG + chr2_1:54958855-54958874 None:intergenic 50.0%
TGTTGAGGTGGCCTTCATCT+AGG - chr2_1:54959117-54959136 Msa0212800:CDS 50.0%
CCCTCATGATGTTCGGATAG+AGG - chr2_1:54959429-54959448 Msa0212800:CDS 50.0%
CCCTCTATCCGAACATCATG+AGG + chr2_1:54959433-54959452 None:intergenic 50.0%
GCTCAAATTACTCGTTGGGC+TGG - chr2_1:54959708-54959727 Msa0212800:CDS 50.0%
! GGGCTGGCAATCATCATATC+AGG - chr2_1:54959724-54959743 Msa0212800:CDS 50.0%
TGCAAATGAGGAGCAACCTC+TGG + chr2_1:54960590-54960609 None:intergenic 50.0%
!! GCTGGATTGGTAAAGGAGAC+TGG - chr2_1:54960636-54960655 Msa0212800:CDS 50.0%
AGTAGCACCTCTTTCAGTCC+TGG - chr2_1:54960809-54960828 Msa0212800:CDS 50.0%
AGGGGGATTTGGAAGCTCAT+CGG + chr2_1:54962558-54962577 None:intergenic 50.0%
! ATCCCCCTTCTGGTTGTTTG+TGG - chr2_1:54962570-54962589 Msa0212800:intron 50.0%
! TCCCCCTTCTGGTTGTTTGT+GGG - chr2_1:54962571-54962590 Msa0212800:intron 50.0%
ACCCACAAACAACCAGAAGG+GGG + chr2_1:54962575-54962594 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGACC+TGG + chr2_1:54957440-54957459 None:intergenic 55.0%
CGTAAGGAGGGTAGACCAGA+TGG - chr2_1:54957850-54957869 Msa0212800:three_prime_UTR 55.0%
AAGGAGGGTAGACCAGATGG+AGG - chr2_1:54957853-54957872 Msa0212800:three_prime_UTR 55.0%
CGATTTGACCAGCCTCCATC+TGG + chr2_1:54957868-54957887 None:intergenic 55.0%
ATCTCCCAGCCAACCCAAGT+GGG - chr2_1:54958037-54958056 Msa0212800:intron 55.0%
!! CAAACCCACTTGGGTTGGCT+GGG + chr2_1:54958044-54958063 None:intergenic 55.0%
!! ACAAACCCACTTGGGTTGGC+TGG + chr2_1:54958045-54958064 None:intergenic 55.0%
TATGGAGAGCCTAACTGGGC+AGG - chr2_1:54958231-54958250 Msa0212800:intron 55.0%
ATGGAGAGCCTAACTGGGCA+GGG - chr2_1:54958232-54958251 Msa0212800:intron 55.0%
AAGGTTCTCCCTGCCCAGTT+AGG + chr2_1:54958243-54958262 None:intergenic 55.0%
AGACAGGGCCGTGTTCCAAA+AGG - chr2_1:54959640-54959659 Msa0212800:CDS 55.0%
ATGTGTGGGACGTTCTTGGG+TGG - chr2_1:54959898-54959917 Msa0212800:CDS 55.0%
GGGGATTCCGTGAGTGTTCA+TGG - chr2_1:54960962-54960981 Msa0212800:CDS 55.0%
! GGAAAAGGTGTGCCCCACTT+TGG + chr2_1:54961262-54961281 None:intergenic 55.0%
GAGCTTCCAAATCCCCCTTC+TGG - chr2_1:54962560-54962579 Msa0212800:intron 55.0%
! GAGAGAGAGACCTGGTGCCA+AGG + chr2_1:54957432-54957451 None:intergenic 60.0%
TCGCGCCACACGTCATACCA+TGG - chr2_1:54957643-54957662 Msa0212800:three_prime_UTR 60.0%
AGGGTAGACCAGATGGAGGC+TGG - chr2_1:54957857-54957876 Msa0212800:three_prime_UTR 60.0%
CATCTCCCAGCCAACCCAAG+TGG - chr2_1:54958036-54958055 Msa0212800:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 54957161 54963243 54957161 ID=Msa0212800;Name=Msa0212800
chr2_1 mRNA 54957161 54963243 54957161 ID=Msa0212800-mRNA-1;Parent=Msa0212800;Name=Msa0212800-mRNA-1;_AED=0.07;_eAED=0.07;_QI=155|0.44|0.4|1|0.55|0.4|10|1199|821
chr2_1 exon 54957161 54957917 54957161 ID=Msa0212800-mRNA-1:exon:15276;Parent=Msa0212800-mRNA-1
chr2_1 exon 54958509 54960211 54958509 ID=Msa0212800-mRNA-1:exon:15275;Parent=Msa0212800-mRNA-1
chr2_1 exon 54960404 54960546 54960404 ID=Msa0212800-mRNA-1:exon:15274;Parent=Msa0212800-mRNA-1
chr2_1 exon 54960553 54960658 54960553 ID=Msa0212800-mRNA-1:exon:15273;Parent=Msa0212800-mRNA-1
chr2_1 exon 54960701 54960843 54960701 ID=Msa0212800-mRNA-1:exon:15272;Parent=Msa0212800-mRNA-1
chr2_1 exon 54960927 54961060 54960927 ID=Msa0212800-mRNA-1:exon:15271;Parent=Msa0212800-mRNA-1
chr2_1 exon 54961159 54961404 54961159 ID=Msa0212800-mRNA-1:exon:15270;Parent=Msa0212800-mRNA-1
chr2_1 exon 54961417 54961660 54961417 ID=Msa0212800-mRNA-1:exon:15269;Parent=Msa0212800-mRNA-1
chr2_1 exon 54962809 54962872 54962809 ID=Msa0212800-mRNA-1:exon:15268;Parent=Msa0212800-mRNA-1
chr2_1 exon 54962964 54963243 54962964 ID=Msa0212800-mRNA-1:exon:15267;Parent=Msa0212800-mRNA-1
chr2_1 five_prime_UTR 54963089 54963243 54963089 ID=Msa0212800-mRNA-1:five_prime_utr;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54962964 54963088 54962964 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54962809 54962872 54962809 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54961417 54961660 54961417 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54961159 54961404 54961159 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54960927 54961060 54960927 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54960701 54960843 54960701 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54960553 54960658 54960553 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54960404 54960546 54960404 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 CDS 54958951 54960211 54958951 ID=Msa0212800-mRNA-1:cds;Parent=Msa0212800-mRNA-1
chr2_1 three_prime_UTR 54958509 54958950 54958509 ID=Msa0212800-mRNA-1:three_prime_utr;Parent=Msa0212800-mRNA-1
chr2_1 three_prime_UTR 54957161 54957917 54957161 ID=Msa0212800-mRNA-1:three_prime_utr;Parent=Msa0212800-mRNA-1
Gene Sequence

>Msa0212800

ATGATTCATTCGACGGTGAAAGCGGCAACTGCAAAAGAAAAAGAAAAAGATAACGATCGGAGCTTGAGTTCTCACATCATCACCCTTCATCGCCGTCTTCTCCATTCCTTAAACCTTGGCACCAGATATTTTGATGAAAATACAAATAGATGGAAGTGGCAGTGCGTCAACATTGAAGTACAGAAAAATGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAATGAGCCCTTGTTAAGCATGGCATCAAATGTGGCAGTGAAATTAGTTAGTATTTTACCGAGTCCACTATTGCAACCGTGTTTGTTGGATCTTGTCTATTATTTATCGTCCTTGCTGTCCTCACATCAAGTAGAAGTTGCAATACCTTGTGCTACTGCTTTGAATTTGGTAATCTCAAATCTGAGTGCTACAATTATTGAAGCACTGAAAGAAACAGAGATTTCCATTTGCATTGTTCGAAATATAAAAGACCGCGGTGCACAGAAGATTGAATATTTTGTGGAGATGGCTTTACTTTTGAGCACAATTCTGTTGAGGTGGCCTTCATCTAGGTTCCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCTTACAAGTACAGATAGTTCTATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGCACAAAAGCTTATAGAGGATGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCTAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTTGTGTGGCGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAGACAGGGCCGTGTTCCAAAAGGATTGAGAACAACTATGGTTCTGTATTAGTGGAAGCATGTAAGTTTTGGAAACAAGGAATTGATAAAGTCCTCCTTAATCTTCTAATTGAAAATATTCATGACCAATCTTCCGAAATTGTTTTGCCATTGGAGAAACAAATATCCATGGAGGGACTGAAACTCAATTATCATGTTGCTCTGAGGAGTTATGTGTGGGACGTTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTCAAACCCCTGTAGTTATACCCATGAGAGTGAACTTCATATCAACTTACTGATTACCTTCACATTTGTGGATGCAATTCAAAAATGGTGCCGGATATATCAAAATGATGCTGATGATAATTTTCAAGGTGAACCAGTATCAAGGGCTGTTTTAATGATGATATATTCTCCATGTAATTATATTTCCTCACATGCTAGATCTGTATTATCTGATATACTGAAGGTCATAGGCGATGTGTACTTGAAAAACTCACTACATACCCTAGATTATATATTATCCCTGAAAAGTTATTGTTCATATGATAAACTCCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTTTCAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAGAGGGTTAAAGACTGTTTTTCTTCTCGTGCAACGATGCTTAAGTAATGATATTCATGTAGAAAGGCCAGAGGTTGCTCCTCATTTGCAAACTGTATTCCATAAAAGGTCTTGTTGCTGGATTGGTAAAGGAGACTGGGAAGGTTCCAATGTTGTCTTATTTTATGGTATGTGGGGCTTAGCTGAATTTCTTCATCAGTGTAGCCTTTTACTAGACATTCCTTTGCAATTTAGTAGAGAGGTGACAAACACTAAAACTCAGTTAGTTAACAAACTTAATGAGATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTTCCAAAAGGATTGGGAACTCTCTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGGATTCCGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCAGCACTTCTACCTTCAGAAGTGCTATCTAGTAGTAAGAGTTCTAAAGAAATAACAGATTGTTTTGTTGGAGAGACTGTGAGAGAAGTTCGCTATTCTTCTCATGTTGATTATGAAGCATTGATGTTATTGTTGGAATATGTATATTTGGGAGGCTTGCATGCAGCAGAAGAAGAAGCTGTAAAGAAGCTCAAAGTTCTTGCTAAGCGTTGTAATGTAAAGCCTCTCTTGCAAATGCTTTGCAGACAATCTCCAAAGTGGGGCACACCTTTTCCCAGCTTTAATCTTACTTCATCTCTTGATTCAGCTGGAAGTTATTTTTCGTATGGTTTGCTTCTTGACCAGATTCTTCTAGATATCTATAGGTTTCATGTGATTTGTGACATTGTGTTCTGTTGTTCATCCATGTTTATTTCCATATTTATTTCCTTCCATATACTTGAGTAG
Protein sequence

>Msa0212800

MIHSTVKAATAKEKEKDNDRSLSSHIITLHRRLLHSLNLGTRYFDENTNRWKWQCVNIEVQKNESAADILGALLWILQCKNEPLLSMASNVAVKLVSILPSPLLQPCLLDLVYYLSSLLSSHQVEVAIPCATALNLVISNLSATIIEALKETEISICIVRNIKDRGAQKIEYFVEMALLLSTILLRWPSSRFPVCNDVELMKVLANMLTSTDSSIKLVLLKLYTSLALCDSVAQKLIEDGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDLCGEALVDAIICGMRETGPCSKRIENNYGSVLVEACKFWKQGIDKVLLNLLIENIHDQSSEIVLPLEKQISMEGLKLNYHVALRSYVWDVLGWLTIHCGENSNPCSYTHESELHINLLITFTFVDAIQKWCRIYQNDADDNFQGEPVSRAVLMMIYSPCNYISSHARSVLSDILKVIGDVYLKNSLHTLDYILSLKSYCSYDKLQLVINLIGLTCLSSLPQYQRCIIESRGLKTVFLLVQRCLSNDIHVERPEVAPHLQTVFHKRSCCWIGKGDWEGSNVVLFYGMWGLAEFLHQCSLLLDIPLQFSREVTNTKTQLVNKLNEICSSTSFSPGVKWYVSYILSYFGFYGFPNEFSKRIGNSLNKEEYADLRLIVANGDSVSVHGVILAVRCPALLPSEVLSSSKSSKEITDCFVGETVREVRYSSHVDYEALMLLLEYVYLGGLHAAEEEAVKKLKVLAKRCNVKPLLQMLCRQSPKWGTPFPSFNLTSSLDSAGSYFSYGLLLDQILLDIYRFHVICDIVFCCSSMFISIFISFHILE*