Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214330 | XP_003596299.1 | 92.810 | 306 | 21 | 1 | 1 | 305 | 1 | 306 | 0.0 | 555 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214330 | sp|K4BIZ9|WRK70_SOLLC | 36.774 | 155 | 75 | 4 | 60 | 207 | 38 | 176 | 1.45e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214330 | G7IR29 | 92.810 | 306 | 21 | 1 | 1 | 305 | 1 | 306 | 0.0 | 555 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0214330 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214330 | MtrunA17_Chr2g0315361 | 92.810 | 306 | 21 | 1 | 1 | 305 | 1 | 306 | 0.0 | 555 |
| Msa0214330 | MtrunA17_Chr2g0315371 | 76.849 | 311 | 55 | 4 | 1 | 305 | 1 | 300 | 2.09e-166 | 464 |
| Msa0214330 | MtrunA17_Chr2g0315381 | 73.443 | 305 | 75 | 5 | 1 | 305 | 1 | 299 | 2.55e-147 | 416 |
| Msa0214330 | MtrunA17_Chr7g0244971 | 40.254 | 236 | 112 | 6 | 12 | 245 | 11 | 219 | 1.13e-49 | 166 |
| Msa0214330 | MtrunA17_Chr7g0244981 | 40.154 | 259 | 116 | 8 | 12 | 267 | 10 | 232 | 3.96e-48 | 162 |
| Msa0214330 | MtrunA17_Chr8g0350621 | 37.705 | 244 | 106 | 9 | 10 | 245 | 3 | 208 | 3.42e-44 | 151 |
| Msa0214330 | MtrunA17_Chr8g0334541 | 37.555 | 229 | 102 | 5 | 19 | 245 | 8 | 197 | 5.47e-39 | 138 |
| Msa0214330 | MtrunA17_Chr3g0128671 | 35.149 | 202 | 106 | 6 | 62 | 244 | 47 | 242 | 6.52e-26 | 104 |
| Msa0214330 | MtrunA17_Chr5g0428351 | 30.453 | 243 | 126 | 7 | 7 | 249 | 82 | 281 | 9.94e-24 | 98.6 |
| Msa0214330 | MtrunA17_Chr2g0315401 | 42.188 | 128 | 64 | 4 | 178 | 304 | 21 | 139 | 2.13e-21 | 88.2 |
| Msa0214330 | MtrunA17_Chr8g0387981 | 29.384 | 211 | 111 | 5 | 10 | 207 | 6 | 191 | 1.06e-19 | 88.2 |
| Msa0214330 | MtrunA17_Chr2g0315341 | 41.129 | 124 | 64 | 4 | 184 | 304 | 1 | 118 | 2.28e-19 | 82.4 |
| Msa0214330 | MtrunA17_Chr7g0275531 | 31.797 | 217 | 108 | 7 | 9 | 218 | 5 | 188 | 6.28e-19 | 85.5 |
| Msa0214330 | MtrunA17_Chr8g0350631 | 50.633 | 79 | 33 | 2 | 169 | 245 | 5 | 79 | 2.71e-18 | 80.1 |
| Msa0214330 | MtrunA17_Chr8g0347251 | 44.211 | 95 | 44 | 2 | 124 | 210 | 105 | 198 | 3.62e-18 | 83.6 |
| Msa0214330 | MtrunA17_Chr3g0126391 | 28.037 | 214 | 108 | 6 | 14 | 207 | 5 | 192 | 7.75e-17 | 79.7 |
| Msa0214330 | MtrunA17_Chr2g0315351 | 41.739 | 115 | 53 | 6 | 8 | 120 | 6 | 108 | 3.62e-15 | 70.5 |
| Msa0214330 | MtrunA17_Chr7g0224801 | 49.351 | 77 | 35 | 2 | 146 | 222 | 91 | 163 | 7.30e-15 | 71.2 |
| Msa0214330 | MtrunA17_Chr2g0315391 | 40.870 | 115 | 54 | 6 | 8 | 120 | 6 | 108 | 9.76e-15 | 69.3 |
| Msa0214330 | MtrunA17_Chr4g0042831 | 38.462 | 104 | 58 | 3 | 105 | 205 | 232 | 332 | 2.39e-13 | 70.1 |
| Msa0214330 | MtrunA17_Chr7g0248721 | 42.391 | 92 | 44 | 4 | 117 | 205 | 109 | 194 | 4.61e-13 | 67.4 |
| Msa0214330 | MtrunA17_Chr5g0418191 | 42.045 | 88 | 45 | 3 | 121 | 205 | 290 | 374 | 7.10e-13 | 68.6 |
| Msa0214330 | MtrunA17_Chr8g0383351 | 46.667 | 60 | 29 | 1 | 146 | 205 | 158 | 214 | 9.04e-13 | 66.6 |
| Msa0214330 | MtrunA17_Chr7g0270191 | 40.000 | 90 | 46 | 2 | 117 | 206 | 119 | 200 | 1.01e-12 | 67.4 |
| Msa0214330 | MtrunA17_Chr3g0129361 | 45.902 | 61 | 30 | 1 | 146 | 206 | 142 | 199 | 3.32e-12 | 64.7 |
| Msa0214330 | MtrunA17_Chr7g0263531 | 48.387 | 62 | 29 | 1 | 144 | 205 | 357 | 415 | 3.62e-12 | 66.6 |
| Msa0214330 | MtrunA17_Chr8g0335811 | 36.082 | 97 | 56 | 2 | 112 | 205 | 115 | 208 | 4.15e-12 | 64.7 |
| Msa0214330 | MtrunA17_Chr5g0431811 | 36.792 | 106 | 57 | 2 | 116 | 221 | 646 | 741 | 4.31e-12 | 67.0 |
| Msa0214330 | MtrunA17_Chr4g0051881 | 49.153 | 59 | 27 | 1 | 147 | 205 | 177 | 232 | 4.82e-12 | 65.9 |
| Msa0214330 | MtrunA17_Chr7g0218081 | 46.667 | 60 | 29 | 1 | 146 | 205 | 408 | 464 | 8.45e-12 | 65.5 |
| Msa0214330 | MtrunA17_Chr1g0194481 | 38.636 | 88 | 51 | 1 | 119 | 206 | 129 | 213 | 9.22e-12 | 64.7 |
| Msa0214330 | MtrunA17_Chr5g0443131 | 50.847 | 59 | 26 | 1 | 147 | 205 | 156 | 211 | 9.88e-12 | 64.7 |
| Msa0214330 | MtrunA17_Chr5g0418781 | 41.250 | 80 | 41 | 2 | 147 | 223 | 123 | 199 | 1.36e-11 | 63.9 |
| Msa0214330 | MtrunA17_Chr1g0147881 | 35.294 | 102 | 64 | 1 | 104 | 205 | 218 | 317 | 2.17e-11 | 63.9 |
| Msa0214330 | MtrunA17_Chr2g0294231 | 46.479 | 71 | 35 | 1 | 147 | 217 | 202 | 269 | 2.20e-11 | 63.9 |
| Msa0214330 | MtrunA17_Chr3g0101131 | 31.008 | 129 | 80 | 3 | 83 | 205 | 344 | 469 | 4.72e-11 | 63.5 |
| Msa0214330 | MtrunA17_Chr5g0445311 | 45.000 | 60 | 30 | 1 | 146 | 205 | 362 | 418 | 7.05e-11 | 62.8 |
| Msa0214330 | MtrunA17_Chr8g0386241 | 45.000 | 60 | 30 | 1 | 146 | 205 | 101 | 157 | 7.68e-11 | 60.1 |
| Msa0214330 | MtrunA17_Chr7g0238921 | 47.619 | 63 | 30 | 1 | 143 | 205 | 119 | 178 | 9.39e-11 | 61.6 |
| Msa0214330 | MtrunA17_Chr4g0068541 | 45.763 | 59 | 29 | 1 | 147 | 205 | 207 | 262 | 9.70e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214330 | AT3G56400.1 | 33.171 | 205 | 107 | 7 | 7 | 207 | 1 | 179 | 1.92e-23 | 97.8 |
| Msa0214330 | AT5G01900.1 | 30.964 | 197 | 103 | 5 | 13 | 208 | 6 | 170 | 1.16e-21 | 92.4 |
| Msa0214330 | AT5G22570.1 | 35.220 | 159 | 81 | 5 | 64 | 221 | 42 | 179 | 3.03e-21 | 91.7 |
| Msa0214330 | AT1G66560.1 | 60.294 | 68 | 26 | 1 | 148 | 214 | 103 | 170 | 7.23e-21 | 90.1 |
| Msa0214330 | AT1G66600.1 | 41.964 | 112 | 50 | 3 | 147 | 243 | 102 | 213 | 1.36e-20 | 89.0 |
| Msa0214330 | AT2G46400.1 | 30.256 | 195 | 100 | 5 | 13 | 207 | 5 | 163 | 2.47e-20 | 89.4 |
| Msa0214330 | AT1G66550.2 | 55.882 | 68 | 29 | 1 | 148 | 214 | 103 | 170 | 3.61e-19 | 85.5 |
| Msa0214330 | AT1G66550.1 | 55.882 | 68 | 29 | 1 | 148 | 214 | 108 | 175 | 5.21e-19 | 85.1 |
| Msa0214330 | AT4G11070.1 | 29.936 | 157 | 100 | 2 | 61 | 207 | 44 | 200 | 2.14e-18 | 84.3 |
| Msa0214330 | AT2G40740.1 | 53.968 | 63 | 29 | 0 | 148 | 210 | 173 | 235 | 1.69e-17 | 81.3 |
| Msa0214330 | AT1G80590.1 | 41.379 | 87 | 51 | 0 | 127 | 213 | 64 | 150 | 2.28e-17 | 80.1 |
| Msa0214330 | AT2G40740.3 | 53.968 | 63 | 29 | 0 | 148 | 210 | 182 | 244 | 2.32e-17 | 81.3 |
| Msa0214330 | AT4G11070.2 | 31.206 | 141 | 87 | 2 | 77 | 207 | 28 | 168 | 6.63e-16 | 76.6 |
| Msa0214330 | AT5G24110.1 | 31.373 | 153 | 76 | 3 | 63 | 207 | 41 | 172 | 1.84e-15 | 75.9 |
| Msa0214330 | AT2G40750.1 | 29.268 | 205 | 134 | 5 | 13 | 209 | 12 | 213 | 2.09e-15 | 76.3 |
| Msa0214330 | AT4G23810.1 | 45.263 | 95 | 45 | 2 | 116 | 210 | 133 | 220 | 2.37e-15 | 75.9 |
| Msa0214330 | AT2G46130.1 | 42.708 | 96 | 42 | 3 | 111 | 205 | 1 | 84 | 5.45e-15 | 70.5 |
| Msa0214330 | AT4G39410.1 | 41.053 | 95 | 50 | 3 | 123 | 214 | 195 | 286 | 7.10e-13 | 68.2 |
| Msa0214330 | AT1G64000.1 | 50.000 | 60 | 27 | 1 | 146 | 205 | 112 | 168 | 1.27e-12 | 65.9 |
| Msa0214330 | AT5G49520.1 | 51.667 | 60 | 26 | 1 | 147 | 206 | 220 | 276 | 1.56e-12 | 67.8 |
| Msa0214330 | AT4G18170.1 | 29.577 | 142 | 85 | 2 | 119 | 248 | 143 | 281 | 1.74e-12 | 67.4 |
| Msa0214330 | AT4G26640.7 | 30.769 | 169 | 101 | 5 | 82 | 239 | 269 | 432 | 1.90e-12 | 67.8 |
| Msa0214330 | AT4G26640.1 | 30.769 | 169 | 101 | 5 | 82 | 239 | 237 | 400 | 2.01e-12 | 67.8 |
| Msa0214330 | AT2G37260.1 | 40.230 | 87 | 43 | 2 | 125 | 205 | 320 | 403 | 2.03e-12 | 67.8 |
| Msa0214330 | AT4G26640.2 | 30.769 | 169 | 101 | 5 | 82 | 239 | 309 | 472 | 2.23e-12 | 67.8 |
| Msa0214330 | AT2G47260.1 | 38.636 | 88 | 51 | 1 | 119 | 206 | 145 | 229 | 2.37e-12 | 67.0 |
| Msa0214330 | AT2G37260.3 | 40.230 | 87 | 43 | 2 | 125 | 205 | 240 | 323 | 2.57e-12 | 67.0 |
| Msa0214330 | AT4G26640.5 | 30.769 | 169 | 101 | 5 | 82 | 239 | 133 | 296 | 2.93e-12 | 67.0 |
| Msa0214330 | AT4G26640.6 | 30.769 | 169 | 101 | 5 | 82 | 239 | 133 | 296 | 2.93e-12 | 67.0 |
| Msa0214330 | AT4G26640.4 | 30.769 | 169 | 101 | 5 | 82 | 239 | 133 | 296 | 2.93e-12 | 67.0 |
| Msa0214330 | AT4G26640.3 | 30.769 | 169 | 101 | 5 | 82 | 239 | 133 | 296 | 2.93e-12 | 67.0 |
| Msa0214330 | AT2G37260.2 | 40.230 | 87 | 43 | 2 | 125 | 205 | 238 | 321 | 3.06e-12 | 66.6 |
| Msa0214330 | AT1G29860.1 | 41.000 | 100 | 54 | 2 | 108 | 205 | 94 | 190 | 4.18e-12 | 65.9 |
| Msa0214330 | AT1G13960.1 | 48.333 | 60 | 28 | 1 | 146 | 205 | 407 | 463 | 4.63e-12 | 66.6 |
| Msa0214330 | AT5G41570.1 | 48.333 | 60 | 28 | 1 | 146 | 205 | 96 | 152 | 5.61e-12 | 63.9 |
| Msa0214330 | AT2G44745.1 | 41.463 | 82 | 42 | 2 | 127 | 205 | 121 | 199 | 6.32e-12 | 64.3 |
| Msa0214330 | AT2G03340.1 | 37.864 | 103 | 57 | 4 | 106 | 205 | 371 | 469 | 7.52e-12 | 66.2 |
| Msa0214330 | AT1G13960.2 | 48.333 | 60 | 28 | 1 | 146 | 205 | 254 | 310 | 1.30e-11 | 65.1 |
| Msa0214330 | AT1G69310.4 | 47.458 | 59 | 28 | 1 | 147 | 205 | 146 | 201 | 2.07e-11 | 63.9 |
| Msa0214330 | AT1G69310.2 | 47.458 | 59 | 28 | 1 | 147 | 205 | 146 | 201 | 2.07e-11 | 63.9 |
| Msa0214330 | AT1G69310.1 | 47.458 | 59 | 28 | 1 | 147 | 205 | 146 | 201 | 2.07e-11 | 63.9 |
| Msa0214330 | AT5G46350.1 | 46.154 | 65 | 32 | 1 | 141 | 205 | 176 | 237 | 3.37e-11 | 63.5 |
| Msa0214330 | AT3G62340.1 | 48.333 | 60 | 28 | 1 | 147 | 206 | 117 | 173 | 6.39e-11 | 62.4 |
| Msa0214330 | AT5G13080.1 | 47.541 | 61 | 29 | 1 | 146 | 206 | 65 | 122 | 6.93e-11 | 60.1 |
Find 49 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCATTCAGACTTAAATT+TGG | 0.184409 | 2_1:+58879966 | Msa0214330:CDS |
| TTTCTCTTGTTCGATACTTT+TGG | 0.224505 | 2_1:-58878192 | None:intergenic |
| AAATATATACCTGAAATATT+TGG | 0.246369 | 2_1:-58879626 | None:intergenic |
| GTCAATATCAGAAGAGAAAA+TGG | 0.250176 | 2_1:-58879992 | None:intergenic |
| ATCTTCAGCAACAATATTAA+AGG | 0.276832 | 2_1:-58877986 | None:intergenic |
| TCACAAATGCCAAATATTTC+AGG | 0.281113 | 2_1:+58879617 | Msa0214330:CDS |
| TCAAATATTAGAGAAGTTAA+AGG | 0.289246 | 2_1:+58877934 | Msa0214330:CDS |
| CTGTGGCTTCCAACAAATTA+TGG | 0.293616 | 2_1:+58877829 | Msa0214330:CDS |
| ATGACCATCATCAATCAATT+TGG | 0.302341 | 2_1:-58879566 | None:intergenic |
| CTAAATCGTCCTCCATCTTA+TGG | 0.325252 | 2_1:-58878128 | None:intergenic |
| AAACATCAAAATCGCATAAC+TGG | 0.325641 | 2_1:-58880179 | None:intergenic |
| TCCAACAAATTATGGCAAAA+AGG | 0.332872 | 2_1:+58877837 | Msa0214330:CDS |
| TTCAACTAATTGCCATAAGA+TGG | 0.399998 | 2_1:+58878116 | Msa0214330:CDS |
| GATTCTCCGGTGAGAACAAT+TGG | 0.405307 | 2_1:-58880155 | None:intergenic |
| TCGTACCGGACTACATATTA+TGG | 0.408781 | 2_1:+58879922 | Msa0214330:CDS |
| ATCATGATGTATCTCTTCCT+TGG | 0.417547 | 2_1:-58880118 | None:intergenic |
| AGTAAACAAGAATATCCGTT+TGG | 0.444637 | 2_1:+58880051 | Msa0214330:CDS |
| CCACTTCTTGCATCTACAAA+AGG | 0.450352 | 2_1:+58880090 | Msa0214330:CDS |
| GGCTGTTCCTATGACTGTTA+AGG | 0.456522 | 2_1:+58878083 | Msa0214330:CDS |
| CAAATATTAGAGAAGTTAAA+GGG | 0.464900 | 2_1:+58877935 | Msa0214330:CDS |
| ATTCCAAATTTAAGTCTGAA+TGG | 0.467467 | 2_1:-58879969 | None:intergenic |
| AAGATGGAGGACGATTTAGA+TGG | 0.477391 | 2_1:+58878132 | Msa0214330:CDS |
| TCTTCAGCAACAATATTAAA+GGG | 0.477763 | 2_1:-58877985 | None:intergenic |
| TAAGGTCAAGTGCACCAACT+TGG | 0.484638 | 2_1:+58879530 | Msa0214330:intron |
| ATGTATGCAGGAGCTACTAT+AGG | 0.489699 | 2_1:+58879830 | Msa0214330:intron |
| AAAAGAACCCTTCGTCGTAC+CGG | 0.495273 | 2_1:+58879908 | Msa0214330:CDS |
| CATAGGAACAGCCACATCAT+TGG | 0.504015 | 2_1:-58878073 | None:intergenic |
| TCATGATGTATCTCTTCCTT+GGG | 0.507868 | 2_1:-58880117 | None:intergenic |
| ATGTAGTCCGGTACGACGAA+GGG | 0.516287 | 2_1:-58879915 | None:intergenic |
| TCGCATAACTGGAGATTCTC+CGG | 0.520000 | 2_1:-58880168 | None:intergenic |
| AAGGTCAAGTGCACCAACTT+GGG | 0.523767 | 2_1:+58879531 | Msa0214330:intron |
| GCCTCCAAATTGATTGATGA+TGG | 0.524878 | 2_1:+58879562 | Msa0214330:CDS |
| ACCATCATCAATCAATTTGG+AGG | 0.543380 | 2_1:-58879563 | None:intergenic |
| GATGACCATAATATGTAGTC+CGG | 0.554702 | 2_1:-58879927 | None:intergenic |
| TATGTAGTCCGGTACGACGA+AGG | 0.562823 | 2_1:-58879916 | None:intergenic |
| GGTCATACATGGAGAAAGTA+CGG | 0.571382 | 2_1:+58879583 | Msa0214330:CDS |
| TGCACCAACTTGGGAAAAGA+CGG | 0.575025 | 2_1:+58879540 | Msa0214330:CDS |
| TCAAAACCAATTGTTCTCAC+CGG | 0.575943 | 2_1:+58880149 | Msa0214330:CDS |
| ATCTACAAAAGGAGATCCCA+AGG | 0.603562 | 2_1:+58880101 | Msa0214330:CDS |
| TGCTGAAGATCTTGTGCGTG+AGG | 0.606211 | 2_1:+58877999 | Msa0214330:CDS |
| TGATTGATGATGGTCATACA+TGG | 0.611865 | 2_1:+58879572 | Msa0214330:CDS |
| AATGGTGGTGACTGTCCAAA+CGG | 0.615715 | 2_1:-58880066 | None:intergenic |
| AACTAATTGCCATAAGATGG+AGG | 0.622291 | 2_1:+58878119 | Msa0214330:CDS |
| GCTTATGAGAGGACGTGACA+TGG | 0.640238 | 2_1:+58877873 | Msa0214330:CDS |
| ATGGAAGATGAGCTTATGAG+AGG | 0.648590 | 2_1:+58877862 | Msa0214330:CDS |
| GTAGATGCAAGAAGTGGCAA+TGG | 0.651066 | 2_1:-58880084 | None:intergenic |
| ATATAATGGAGAATATGCTG+TGG | 0.665487 | 2_1:+58877812 | None:intergenic |
| GATGCAAGAAGTGGCAATGG+TGG | 0.680588 | 2_1:-58880081 | None:intergenic |
| TGACAAAGAGTCCAATGATG+TGG | 0.703533 | 2_1:+58878062 | Msa0214330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr2_1:58879047-58879066 | Msa0214330:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr2_1:58879047-58879066 | Msa0214330:intron | 0.0% |
| !! | AAAATCAAAATTAATATAGT+TGG | - | chr2_1:58878470-58878489 | None:intergenic | 10.0% |
| !! | TTATTTGTATCTTATAATAT+CGG | + | chr2_1:58878488-58878507 | Msa0214330:intron | 10.0% |
| !! | AATTATATCATTAAACTAAT+AGG | + | chr2_1:58878609-58878628 | Msa0214330:intron | 10.0% |
| !! | TTAACATTATAAGTATAAAA+TGG | - | chr2_1:58879131-58879150 | None:intergenic | 10.0% |
| !! | CATAAATTAATTAATCAAAT+TGG | - | chr2_1:58879451-58879470 | None:intergenic | 10.0% |
| !! | AAAATCAAAATTAATATAGT+TGG | - | chr2_1:58878470-58878489 | None:intergenic | 10.0% |
| !! | TTATTTGTATCTTATAATAT+CGG | + | chr2_1:58878488-58878507 | Msa0214330:intron | 10.0% |
| !! | AATTATATCATTAAACTAAT+AGG | + | chr2_1:58878609-58878628 | Msa0214330:intron | 10.0% |
| !! | TTAACATTATAAGTATAAAA+TGG | - | chr2_1:58879131-58879150 | None:intergenic | 10.0% |
| !! | CATAAATTAATTAATCAAAT+TGG | - | chr2_1:58879451-58879470 | None:intergenic | 10.0% |
| !!! | GTTTAAAAATTTAGAACAAT+TGG | - | chr2_1:58878530-58878549 | None:intergenic | 15.0% |
| !! | AATTAATAGAATGTTTGTTT+AGG | + | chr2_1:58878924-58878943 | Msa0214330:intron | 15.0% |
| !! | ATTAATAGAATGTTTGTTTA+GGG | + | chr2_1:58878925-58878944 | Msa0214330:intron | 15.0% |
| !!! | TATATACTTTTTTTTTCTCA+GGG | - | chr2_1:58879239-58879258 | None:intergenic | 15.0% |
| !! | AAATATATACCTGAAATATT+TGG | - | chr2_1:58879629-58879648 | None:intergenic | 15.0% |
| !!! | GTTTAAAAATTTAGAACAAT+TGG | - | chr2_1:58878530-58878549 | None:intergenic | 15.0% |
| !! | AATTAATAGAATGTTTGTTT+AGG | + | chr2_1:58878924-58878943 | Msa0214330:intron | 15.0% |
| !! | ATTAATAGAATGTTTGTTTA+GGG | + | chr2_1:58878925-58878944 | Msa0214330:intron | 15.0% |
| !!! | TATATACTTTTTTTTTCTCA+GGG | - | chr2_1:58879239-58879258 | None:intergenic | 15.0% |
| !! | AAATATATACCTGAAATATT+TGG | - | chr2_1:58879629-58879648 | None:intergenic | 15.0% |
| !! | TCAAATATTAGAGAAGTTAA+AGG | + | chr2_1:58877934-58877953 | Msa0214330:CDS | 20.0% |
| !! | CAAATATTAGAGAAGTTAAA+GGG | + | chr2_1:58877935-58877954 | Msa0214330:CDS | 20.0% |
| !! | TAAGAACATAGTATAAAACA+TGG | - | chr2_1:58878232-58878251 | None:intergenic | 20.0% |
| !!! | TACTATGTTCTTATTTTTTG+AGG | + | chr2_1:58878239-58878258 | Msa0214330:intron | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr2_1:58878281-58878300 | None:intergenic | 20.0% |
| !! | TTATTCAATGAACCTAAAAA+AGG | + | chr2_1:58878365-58878384 | Msa0214330:intron | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | - | chr2_1:58878380-58878399 | None:intergenic | 20.0% |
| !!! | TTTTACATCCATTTTTGTTT+AGG | + | chr2_1:58878790-58878809 | Msa0214330:intron | 20.0% |
| !!! | TTTACATCCATTTTTGTTTA+GGG | + | chr2_1:58878791-58878810 | Msa0214330:intron | 20.0% |
| !! | ACAAACATTCTATTAATTCT+GGG | - | chr2_1:58878922-58878941 | None:intergenic | 20.0% |
| !! | AACAAACATTCTATTAATTC+TGG | - | chr2_1:58878923-58878942 | None:intergenic | 20.0% |
| !!! | ATATACTTTTTTTTTCTCAG+GGG | - | chr2_1:58879238-58879257 | None:intergenic | 20.0% |
| !!! | GTATATACTTTTTTTTTCTC+AGG | - | chr2_1:58879240-58879259 | None:intergenic | 20.0% |
| !!! | GATATTTTTGTCATCATATA+AGG | + | chr2_1:58879512-58879531 | Msa0214330:intron | 20.0% |
| !! | TCAAAATTTAATATGTATGC+AGG | + | chr2_1:58879818-58879837 | Msa0214330:intron | 20.0% |
| !! | TCAAATATTAGAGAAGTTAA+AGG | + | chr2_1:58877934-58877953 | Msa0214330:CDS | 20.0% |
| !! | CAAATATTAGAGAAGTTAAA+GGG | + | chr2_1:58877935-58877954 | Msa0214330:CDS | 20.0% |
| !! | TAAGAACATAGTATAAAACA+TGG | - | chr2_1:58878232-58878251 | None:intergenic | 20.0% |
| !!! | TACTATGTTCTTATTTTTTG+AGG | + | chr2_1:58878239-58878258 | Msa0214330:intron | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr2_1:58878281-58878300 | None:intergenic | 20.0% |
| !! | TTATTCAATGAACCTAAAAA+AGG | + | chr2_1:58878365-58878384 | Msa0214330:intron | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | - | chr2_1:58878380-58878399 | None:intergenic | 20.0% |
| !!! | TTTTACATCCATTTTTGTTT+AGG | + | chr2_1:58878790-58878809 | Msa0214330:intron | 20.0% |
| !!! | TTTACATCCATTTTTGTTTA+GGG | + | chr2_1:58878791-58878810 | Msa0214330:intron | 20.0% |
| !! | ACAAACATTCTATTAATTCT+GGG | - | chr2_1:58878922-58878941 | None:intergenic | 20.0% |
| !! | AACAAACATTCTATTAATTC+TGG | - | chr2_1:58878923-58878942 | None:intergenic | 20.0% |
| !!! | ATATACTTTTTTTTTCTCAG+GGG | - | chr2_1:58879238-58879257 | None:intergenic | 20.0% |
| !!! | GTATATACTTTTTTTTTCTC+AGG | - | chr2_1:58879240-58879259 | None:intergenic | 20.0% |
| !!! | GATATTTTTGTCATCATATA+AGG | + | chr2_1:58879512-58879531 | Msa0214330:intron | 20.0% |
| !! | TCAAAATTTAATATGTATGC+AGG | + | chr2_1:58879818-58879837 | Msa0214330:intron | 20.0% |
| ! | TCTTCAGCAACAATATTAAA+GGG | - | chr2_1:58877988-58878007 | None:intergenic | 25.0% |
| ! | ATCTTCAGCAACAATATTAA+AGG | - | chr2_1:58877989-58878008 | None:intergenic | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr2_1:58878390-58878409 | Msa0214330:intron | 25.0% |
| !!! | TAGTATTTGACTTGTTTCAA+AGG | + | chr2_1:58878430-58878449 | Msa0214330:intron | 25.0% |
| ! | AATTGTCGAATGTGTAAATT+TGG | - | chr2_1:58878593-58878612 | None:intergenic | 25.0% |
| ! | ACAAAAACCCTAAACAAAAA+TGG | - | chr2_1:58878801-58878820 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTAGGGTTTTTG+TGG | + | chr2_1:58878800-58878819 | Msa0214330:intron | 25.0% |
| ! | CAAACATTCTATTAATTCTG+GGG | - | chr2_1:58878921-58878940 | None:intergenic | 25.0% |
| !!! | GGTTAACTTGTCTTTTATTA+AGG | - | chr2_1:58879274-58879293 | None:intergenic | 25.0% |
| ! | ATGATGATCATATATATGTC+TGG | - | chr2_1:58879360-58879379 | None:intergenic | 25.0% |
| ! | ATACTCAATGGAAGTTAATA+TGG | + | chr2_1:58879383-58879402 | Msa0214330:intron | 25.0% |
| ! | ATTTGAATGTTACAGATTGA+TGG | - | chr2_1:58879756-58879775 | None:intergenic | 25.0% |
| ! | TTACCATTCAGACTTAAATT+TGG | + | chr2_1:58879966-58879985 | Msa0214330:CDS | 25.0% |
| ! | ATTCCAAATTTAAGTCTGAA+TGG | - | chr2_1:58879972-58879991 | None:intergenic | 25.0% |
| ! | TCTTCAGCAACAATATTAAA+GGG | - | chr2_1:58877988-58878007 | None:intergenic | 25.0% |
| ! | ATCTTCAGCAACAATATTAA+AGG | - | chr2_1:58877989-58878008 | None:intergenic | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr2_1:58878390-58878409 | Msa0214330:intron | 25.0% |
| !!! | TAGTATTTGACTTGTTTCAA+AGG | + | chr2_1:58878430-58878449 | Msa0214330:intron | 25.0% |
| ! | AATTGTCGAATGTGTAAATT+TGG | - | chr2_1:58878593-58878612 | None:intergenic | 25.0% |
| ! | ACAAAAACCCTAAACAAAAA+TGG | - | chr2_1:58878801-58878820 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTAGGGTTTTTG+TGG | + | chr2_1:58878800-58878819 | Msa0214330:intron | 25.0% |
| ! | CAAACATTCTATTAATTCTG+GGG | - | chr2_1:58878921-58878940 | None:intergenic | 25.0% |
| !!! | GGTTAACTTGTCTTTTATTA+AGG | - | chr2_1:58879274-58879293 | None:intergenic | 25.0% |
| ! | ATGATGATCATATATATGTC+TGG | - | chr2_1:58879360-58879379 | None:intergenic | 25.0% |
| ! | ATACTCAATGGAAGTTAATA+TGG | + | chr2_1:58879383-58879402 | Msa0214330:intron | 25.0% |
| ! | ATTTGAATGTTACAGATTGA+TGG | - | chr2_1:58879756-58879775 | None:intergenic | 25.0% |
| ! | TTACCATTCAGACTTAAATT+TGG | + | chr2_1:58879966-58879985 | Msa0214330:CDS | 25.0% |
| ! | ATTCCAAATTTAAGTCTGAA+TGG | - | chr2_1:58879972-58879991 | None:intergenic | 25.0% |
| TCCAACAAATTATGGCAAAA+AGG | + | chr2_1:58877837-58877856 | Msa0214330:CDS | 30.0% | |
| AAATTATGGCAAAAAGGCAA+TGG | + | chr2_1:58877843-58877862 | Msa0214330:CDS | 30.0% | |
| GAAAAATCCTTAACAGTCAT+AGG | - | chr2_1:58878093-58878112 | None:intergenic | 30.0% | |
| TTCAACTAATTGCCATAAGA+TGG | + | chr2_1:58878116-58878135 | Msa0214330:CDS | 30.0% | |
| ! | TTTCTCTTGTTCGATACTTT+TGG | - | chr2_1:58878195-58878214 | None:intergenic | 30.0% |
| CATTGAGTAGTTAATGTATG+TGG | + | chr2_1:58878316-58878335 | Msa0214330:intron | 30.0% | |
| GTATCTTATAATATCGGACA+AGG | + | chr2_1:58878494-58878513 | Msa0214330:intron | 30.0% | |
| TTTACACATACGACATGTAT+CGG | - | chr2_1:58878659-58878678 | None:intergenic | 30.0% | |
| AAAGAAGGAAGATAAATCTC+TGG | - | chr2_1:58878754-58878773 | None:intergenic | 30.0% | |
| CACAATTTACACAACAAAGA+AGG | - | chr2_1:58878769-58878788 | None:intergenic | 30.0% | |
| ! | CTTCTTTGTTGTGTAAATTG+TGG | + | chr2_1:58878767-58878786 | Msa0214330:intron | 30.0% |
| GCATCACACATTTCTTTATT+TGG | - | chr2_1:58879295-58879314 | None:intergenic | 30.0% | |
| ATGATCATATATATGTCTGG+AGG | - | chr2_1:58879357-58879376 | None:intergenic | 30.0% | |
| GATCATCATTACATACTCAA+TGG | + | chr2_1:58879371-58879390 | Msa0214330:intron | 30.0% | |
| ATGACCATCATCAATCAATT+TGG | - | chr2_1:58879569-58879588 | None:intergenic | 30.0% | |
| TCACAAATGCCAAATATTTC+AGG | + | chr2_1:58879617-58879636 | Msa0214330:CDS | 30.0% | |
| GTCAATATCAGAAGAGAAAA+TGG | - | chr2_1:58879995-58880014 | None:intergenic | 30.0% | |
| AGTAAACAAGAATATCCGTT+TGG | + | chr2_1:58880051-58880070 | Msa0214330:CDS | 30.0% | |
| AAACATCAAAATCGCATAAC+TGG | - | chr2_1:58880182-58880201 | None:intergenic | 30.0% | |
| TCCAACAAATTATGGCAAAA+AGG | + | chr2_1:58877837-58877856 | Msa0214330:CDS | 30.0% | |
| AAATTATGGCAAAAAGGCAA+TGG | + | chr2_1:58877843-58877862 | Msa0214330:CDS | 30.0% | |
| GAAAAATCCTTAACAGTCAT+AGG | - | chr2_1:58878093-58878112 | None:intergenic | 30.0% | |
| TTCAACTAATTGCCATAAGA+TGG | + | chr2_1:58878116-58878135 | Msa0214330:CDS | 30.0% | |
| ! | TTTCTCTTGTTCGATACTTT+TGG | - | chr2_1:58878195-58878214 | None:intergenic | 30.0% |
| CATTGAGTAGTTAATGTATG+TGG | + | chr2_1:58878316-58878335 | Msa0214330:intron | 30.0% | |
| GTATCTTATAATATCGGACA+AGG | + | chr2_1:58878494-58878513 | Msa0214330:intron | 30.0% | |
| TTTACACATACGACATGTAT+CGG | - | chr2_1:58878659-58878678 | None:intergenic | 30.0% | |
| AAAGAAGGAAGATAAATCTC+TGG | - | chr2_1:58878754-58878773 | None:intergenic | 30.0% | |
| CACAATTTACACAACAAAGA+AGG | - | chr2_1:58878769-58878788 | None:intergenic | 30.0% | |
| ! | CTTCTTTGTTGTGTAAATTG+TGG | + | chr2_1:58878767-58878786 | Msa0214330:intron | 30.0% |
| GCATCACACATTTCTTTATT+TGG | - | chr2_1:58879295-58879314 | None:intergenic | 30.0% | |
| ATGATCATATATATGTCTGG+AGG | - | chr2_1:58879357-58879376 | None:intergenic | 30.0% | |
| GATCATCATTACATACTCAA+TGG | + | chr2_1:58879371-58879390 | Msa0214330:intron | 30.0% | |
| ATGACCATCATCAATCAATT+TGG | - | chr2_1:58879569-58879588 | None:intergenic | 30.0% | |
| TCACAAATGCCAAATATTTC+AGG | + | chr2_1:58879617-58879636 | Msa0214330:CDS | 30.0% | |
| GTCAATATCAGAAGAGAAAA+TGG | - | chr2_1:58879995-58880014 | None:intergenic | 30.0% | |
| AGTAAACAAGAATATCCGTT+TGG | + | chr2_1:58880051-58880070 | Msa0214330:CDS | 30.0% | |
| AAACATCAAAATCGCATAAC+TGG | - | chr2_1:58880182-58880201 | None:intergenic | 30.0% | |
| !! | GCCTTTTTGCCATAATTTGT+TGG | - | chr2_1:58877841-58877860 | None:intergenic | 35.0% |
| AACTAATTGCCATAAGATGG+AGG | + | chr2_1:58878119-58878138 | Msa0214330:CDS | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr2_1:58878394-58878413 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr2_1:58878393-58878412 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr2_1:58878393-58878412 | Msa0214330:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr2_1:58878394-58878413 | Msa0214330:intron | 35.0% |
| TAATAAGAACATACTCCCTC+CGG | - | chr2_1:58878412-58878431 | None:intergenic | 35.0% | |
| ! | GTTTTTGCAAAACCATTTGG+CGG | - | chr2_1:58878732-58878751 | None:intergenic | 35.0% |
| !! | CTGGTTTTTGCAAAACCATT+TGG | - | chr2_1:58878735-58878754 | None:intergenic | 35.0% |
| !! | CATGTTGGTTTAGAGTACAA+CGG | + | chr2_1:58878825-58878844 | Msa0214330:intron | 35.0% |
| AATCCATATACAAACCGAGA+AGG | + | chr2_1:58878855-58878874 | Msa0214330:intron | 35.0% | |
| TCCTTAATTCTCTTCCTTCT+CGG | - | chr2_1:58878872-58878891 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGTTTCTCTCTCT+GGG | - | chr2_1:58878898-58878917 | None:intergenic | 35.0% |
| ! | ACATTCTATTAATTCTGGGG+TGG | - | chr2_1:58878918-58878937 | None:intergenic | 35.0% |
| !!! | ACTTTTTTTTTCTCAGGGGA+GGG | - | chr2_1:58879234-58879253 | None:intergenic | 35.0% |
| !!! | TACTTTTTTTTTCTCAGGGG+AGG | - | chr2_1:58879235-58879254 | None:intergenic | 35.0% |
| !! | TTTTAATTCACAGCACAGCT+AGG | + | chr2_1:58879331-58879350 | Msa0214330:intron | 35.0% |
| ACCATCATCAATCAATTTGG+AGG | - | chr2_1:58879566-58879585 | None:intergenic | 35.0% | |
| !! | TGATTGATGATGGTCATACA+TGG | + | chr2_1:58879572-58879591 | Msa0214330:CDS | 35.0% |
| GATGACCATAATATGTAGTC+CGG | - | chr2_1:58879930-58879949 | None:intergenic | 35.0% | |
| TCATGATGTATCTCTTCCTT+GGG | - | chr2_1:58880120-58880139 | None:intergenic | 35.0% | |
| ATCATGATGTATCTCTTCCT+TGG | - | chr2_1:58880121-58880140 | None:intergenic | 35.0% | |
| TCAAAACCAATTGTTCTCAC+CGG | + | chr2_1:58880149-58880168 | Msa0214330:CDS | 35.0% | |
| !! | GCCTTTTTGCCATAATTTGT+TGG | - | chr2_1:58877841-58877860 | None:intergenic | 35.0% |
| AACTAATTGCCATAAGATGG+AGG | + | chr2_1:58878119-58878138 | Msa0214330:CDS | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr2_1:58878394-58878413 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr2_1:58878393-58878412 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr2_1:58878393-58878412 | Msa0214330:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr2_1:58878394-58878413 | Msa0214330:intron | 35.0% |
| TAATAAGAACATACTCCCTC+CGG | - | chr2_1:58878412-58878431 | None:intergenic | 35.0% | |
| ! | GTTTTTGCAAAACCATTTGG+CGG | - | chr2_1:58878732-58878751 | None:intergenic | 35.0% |
| !! | CTGGTTTTTGCAAAACCATT+TGG | - | chr2_1:58878735-58878754 | None:intergenic | 35.0% |
| !! | CATGTTGGTTTAGAGTACAA+CGG | + | chr2_1:58878825-58878844 | Msa0214330:intron | 35.0% |
| AATCCATATACAAACCGAGA+AGG | + | chr2_1:58878855-58878874 | Msa0214330:intron | 35.0% | |
| TCCTTAATTCTCTTCCTTCT+CGG | - | chr2_1:58878872-58878891 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGTTTCTCTCTCT+GGG | - | chr2_1:58878898-58878917 | None:intergenic | 35.0% |
| ! | ACATTCTATTAATTCTGGGG+TGG | - | chr2_1:58878918-58878937 | None:intergenic | 35.0% |
| !!! | ACTTTTTTTTTCTCAGGGGA+GGG | - | chr2_1:58879234-58879253 | None:intergenic | 35.0% |
| !!! | TACTTTTTTTTTCTCAGGGG+AGG | - | chr2_1:58879235-58879254 | None:intergenic | 35.0% |
| !! | TTTTAATTCACAGCACAGCT+AGG | + | chr2_1:58879331-58879350 | Msa0214330:intron | 35.0% |
| ACCATCATCAATCAATTTGG+AGG | - | chr2_1:58879566-58879585 | None:intergenic | 35.0% | |
| !! | TGATTGATGATGGTCATACA+TGG | + | chr2_1:58879572-58879591 | Msa0214330:CDS | 35.0% |
| GATGACCATAATATGTAGTC+CGG | - | chr2_1:58879930-58879949 | None:intergenic | 35.0% | |
| TCATGATGTATCTCTTCCTT+GGG | - | chr2_1:58880120-58880139 | None:intergenic | 35.0% | |
| ATCATGATGTATCTCTTCCT+TGG | - | chr2_1:58880121-58880140 | None:intergenic | 35.0% | |
| TCAAAACCAATTGTTCTCAC+CGG | + | chr2_1:58880149-58880168 | Msa0214330:CDS | 35.0% | |
| CTGTGGCTTCCAACAAATTA+TGG | + | chr2_1:58877829-58877848 | Msa0214330:CDS | 40.0% | |
| ATGGAAGATGAGCTTATGAG+AGG | + | chr2_1:58877862-58877881 | Msa0214330:CDS | 40.0% | |
| TGACAAAGAGTCCAATGATG+TGG | + | chr2_1:58878062-58878081 | Msa0214330:CDS | 40.0% | |
| CTAAATCGTCCTCCATCTTA+TGG | - | chr2_1:58878131-58878150 | None:intergenic | 40.0% | |
| AAGATGGAGGACGATTTAGA+TGG | + | chr2_1:58878132-58878151 | Msa0214330:CDS | 40.0% | |
| ! | CTTCCTTCTCGGTTTGTATA+TGG | - | chr2_1:58878861-58878880 | None:intergenic | 40.0% |
| ACCGAGAAGGAAGAGAATTA+AGG | + | chr2_1:58878868-58878887 | Msa0214330:intron | 40.0% | |
| !! | GTGGTTTTTGTTTCTCTCTC+TGG | - | chr2_1:58878899-58878918 | None:intergenic | 40.0% |
| !!! | TTTTTTTTTCTCAGGGGAGG+GGG | - | chr2_1:58879232-58879251 | None:intergenic | 40.0% |
| !!! | CTTTTTTTTTCTCAGGGGAG+GGG | - | chr2_1:58879233-58879252 | None:intergenic | 40.0% |
| GCCTCCAAATTGATTGATGA+TGG | + | chr2_1:58879562-58879581 | Msa0214330:CDS | 40.0% | |
| GGTCATACATGGAGAAAGTA+CGG | + | chr2_1:58879583-58879602 | Msa0214330:CDS | 40.0% | |
| ATGTATGCAGGAGCTACTAT+AGG | + | chr2_1:58879830-58879849 | Msa0214330:intron | 40.0% | |
| TCGTACCGGACTACATATTA+TGG | + | chr2_1:58879922-58879941 | Msa0214330:CDS | 40.0% | |
| ! | CCTTTTGTAGATGCAAGAAG+TGG | - | chr2_1:58880093-58880112 | None:intergenic | 40.0% |
| CCACTTCTTGCATCTACAAA+AGG | + | chr2_1:58880090-58880109 | Msa0214330:CDS | 40.0% | |
| ATCTACAAAAGGAGATCCCA+AGG | + | chr2_1:58880101-58880120 | Msa0214330:CDS | 40.0% | |
| !!! | GGTGAGAACAATTGGTTTTG+AGG | - | chr2_1:58880150-58880169 | None:intergenic | 40.0% |
| CTGTGGCTTCCAACAAATTA+TGG | + | chr2_1:58877829-58877848 | Msa0214330:CDS | 40.0% | |
| ATGGAAGATGAGCTTATGAG+AGG | + | chr2_1:58877862-58877881 | Msa0214330:CDS | 40.0% | |
| TGACAAAGAGTCCAATGATG+TGG | + | chr2_1:58878062-58878081 | Msa0214330:CDS | 40.0% | |
| CTAAATCGTCCTCCATCTTA+TGG | - | chr2_1:58878131-58878150 | None:intergenic | 40.0% | |
| AAGATGGAGGACGATTTAGA+TGG | + | chr2_1:58878132-58878151 | Msa0214330:CDS | 40.0% | |
| ! | CTTCCTTCTCGGTTTGTATA+TGG | - | chr2_1:58878861-58878880 | None:intergenic | 40.0% |
| ACCGAGAAGGAAGAGAATTA+AGG | + | chr2_1:58878868-58878887 | Msa0214330:intron | 40.0% | |
| !! | GTGGTTTTTGTTTCTCTCTC+TGG | - | chr2_1:58878899-58878918 | None:intergenic | 40.0% |
| !!! | TTTTTTTTTCTCAGGGGAGG+GGG | - | chr2_1:58879232-58879251 | None:intergenic | 40.0% |
| !!! | CTTTTTTTTTCTCAGGGGAG+GGG | - | chr2_1:58879233-58879252 | None:intergenic | 40.0% |
| GCCTCCAAATTGATTGATGA+TGG | + | chr2_1:58879562-58879581 | Msa0214330:CDS | 40.0% | |
| GGTCATACATGGAGAAAGTA+CGG | + | chr2_1:58879583-58879602 | Msa0214330:CDS | 40.0% | |
| ATGTATGCAGGAGCTACTAT+AGG | + | chr2_1:58879830-58879849 | Msa0214330:intron | 40.0% | |
| TCGTACCGGACTACATATTA+TGG | + | chr2_1:58879922-58879941 | Msa0214330:CDS | 40.0% | |
| ! | CCTTTTGTAGATGCAAGAAG+TGG | - | chr2_1:58880093-58880112 | None:intergenic | 40.0% |
| CCACTTCTTGCATCTACAAA+AGG | + | chr2_1:58880090-58880109 | Msa0214330:CDS | 40.0% | |
| ATCTACAAAAGGAGATCCCA+AGG | + | chr2_1:58880101-58880120 | Msa0214330:CDS | 40.0% | |
| !!! | GGTGAGAACAATTGGTTTTG+AGG | - | chr2_1:58880150-58880169 | None:intergenic | 40.0% |
| CATAGGAACAGCCACATCAT+TGG | - | chr2_1:58878076-58878095 | None:intergenic | 45.0% | |
| GGCTGTTCCTATGACTGTTA+AGG | + | chr2_1:58878083-58878102 | Msa0214330:CDS | 45.0% | |
| ! | AGGAAGTATACTACTCCCTC+CGG | + | chr2_1:58878259-58878278 | Msa0214330:intron | 45.0% |
| GAGGAGAGGGAGAAAAATGA+AGG | - | chr2_1:58878710-58878729 | None:intergenic | 45.0% | |
| TTTGCAAAACCATTTGGCGG+AGG | - | chr2_1:58878729-58878748 | None:intergenic | 45.0% | |
| ! | AGGGTTTTTGTGGCTCATGT+TGG | + | chr2_1:58878810-58878829 | Msa0214330:intron | 45.0% |
| TAAGGTCAAGTGCACCAACT+TGG | + | chr2_1:58879530-58879549 | Msa0214330:intron | 45.0% | |
| AAGGTCAAGTGCACCAACTT+GGG | + | chr2_1:58879531-58879550 | Msa0214330:intron | 45.0% | |
| TGCACCAACTTGGGAAAAGA+CGG | + | chr2_1:58879540-58879559 | Msa0214330:CDS | 45.0% | |
| AAAAGAACCCTTCGTCGTAC+CGG | + | chr2_1:58879908-58879927 | Msa0214330:CDS | 45.0% | |
| ! | AATGGTGGTGACTGTCCAAA+CGG | - | chr2_1:58880069-58880088 | None:intergenic | 45.0% |
| GTAGATGCAAGAAGTGGCAA+TGG | - | chr2_1:58880087-58880106 | None:intergenic | 45.0% | |
| GATTCTCCGGTGAGAACAAT+TGG | - | chr2_1:58880158-58880177 | None:intergenic | 45.0% | |
| TCGCATAACTGGAGATTCTC+CGG | - | chr2_1:58880171-58880190 | None:intergenic | 45.0% | |
| CATAGGAACAGCCACATCAT+TGG | - | chr2_1:58878076-58878095 | None:intergenic | 45.0% | |
| GGCTGTTCCTATGACTGTTA+AGG | + | chr2_1:58878083-58878102 | Msa0214330:CDS | 45.0% | |
| ! | AGGAAGTATACTACTCCCTC+CGG | + | chr2_1:58878259-58878278 | Msa0214330:intron | 45.0% |
| GAGGAGAGGGAGAAAAATGA+AGG | - | chr2_1:58878710-58878729 | None:intergenic | 45.0% | |
| TTTGCAAAACCATTTGGCGG+AGG | - | chr2_1:58878729-58878748 | None:intergenic | 45.0% | |
| ! | AGGGTTTTTGTGGCTCATGT+TGG | + | chr2_1:58878810-58878829 | Msa0214330:intron | 45.0% |
| TAAGGTCAAGTGCACCAACT+TGG | + | chr2_1:58879530-58879549 | Msa0214330:intron | 45.0% | |
| AAGGTCAAGTGCACCAACTT+GGG | + | chr2_1:58879531-58879550 | Msa0214330:intron | 45.0% | |
| TGCACCAACTTGGGAAAAGA+CGG | + | chr2_1:58879540-58879559 | Msa0214330:CDS | 45.0% | |
| AAAAGAACCCTTCGTCGTAC+CGG | + | chr2_1:58879908-58879927 | Msa0214330:CDS | 45.0% | |
| ! | AATGGTGGTGACTGTCCAAA+CGG | - | chr2_1:58880069-58880088 | None:intergenic | 45.0% |
| GTAGATGCAAGAAGTGGCAA+TGG | - | chr2_1:58880087-58880106 | None:intergenic | 45.0% | |
| GATTCTCCGGTGAGAACAAT+TGG | - | chr2_1:58880158-58880177 | None:intergenic | 45.0% | |
| TCGCATAACTGGAGATTCTC+CGG | - | chr2_1:58880171-58880190 | None:intergenic | 45.0% | |
| !!! | GAATTAATATAAATTTTTAT+AGG | - | chr2_1:58878973-58878992 | None:intergenic | 5.0% |
| !!! | GAATTTATTTAATATTTTAA+AGG | - | chr2_1:58879194-58879213 | None:intergenic | 5.0% |
| !!! | GAATTAATATAAATTTTTAT+AGG | - | chr2_1:58878973-58878992 | None:intergenic | 5.0% |
| !!! | GAATTTATTTAATATTTTAA+AGG | - | chr2_1:58879194-58879213 | None:intergenic | 5.0% |
| GCTTATGAGAGGACGTGACA+TGG | + | chr2_1:58877873-58877892 | Msa0214330:CDS | 50.0% | |
| TGCTGAAGATCTTGTGCGTG+AGG | + | chr2_1:58877999-58878018 | Msa0214330:CDS | 50.0% | |
| AAACCATTTGGCGGAGGAGA+GGG | - | chr2_1:58878723-58878742 | None:intergenic | 50.0% | |
| AAAACCATTTGGCGGAGGAG+AGG | - | chr2_1:58878724-58878743 | None:intergenic | 50.0% | |
| ATGTAGTCCGGTACGACGAA+GGG | - | chr2_1:58879918-58879937 | None:intergenic | 50.0% | |
| TATGTAGTCCGGTACGACGA+AGG | - | chr2_1:58879919-58879938 | None:intergenic | 50.0% | |
| GATGCAAGAAGTGGCAATGG+TGG | - | chr2_1:58880084-58880103 | None:intergenic | 50.0% | |
| GCTTATGAGAGGACGTGACA+TGG | + | chr2_1:58877873-58877892 | Msa0214330:CDS | 50.0% | |
| TGCTGAAGATCTTGTGCGTG+AGG | + | chr2_1:58877999-58878018 | Msa0214330:CDS | 50.0% | |
| AAACCATTTGGCGGAGGAGA+GGG | - | chr2_1:58878723-58878742 | None:intergenic | 50.0% | |
| AAAACCATTTGGCGGAGGAG+AGG | - | chr2_1:58878724-58878743 | None:intergenic | 50.0% | |
| ATGTAGTCCGGTACGACGAA+GGG | - | chr2_1:58879918-58879937 | None:intergenic | 50.0% | |
| TATGTAGTCCGGTACGACGA+AGG | - | chr2_1:58879919-58879938 | None:intergenic | 50.0% | |
| GATGCAAGAAGTGGCAATGG+TGG | - | chr2_1:58880084-58880103 | None:intergenic | 50.0% | |
| TTTCTCAGGGGAGGGGGATT+TGG | - | chr2_1:58879226-58879245 | None:intergenic | 55.0% | |
| ! | GAGGCCGTCTTTTCCCAAGT+TGG | - | chr2_1:58879547-58879566 | None:intergenic | 55.0% |
| TTTCTCAGGGGAGGGGGATT+TGG | - | chr2_1:58879226-58879245 | None:intergenic | 55.0% | |
| ! | GAGGCCGTCTTTTCCCAAGT+TGG | - | chr2_1:58879547-58879566 | None:intergenic | 55.0% |
| TCTCCCTCTCCTCCGCCAAA+TGG | + | chr2_1:58878717-58878736 | Msa0214330:intron | 60.0% | |
| TCTCCCTCTCCTCCGCCAAA+TGG | + | chr2_1:58878717-58878736 | Msa0214330:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 58877817 | 58880254 | 58877817 | ID=Msa0214330;Name=Msa0214330 |
| chr2_1 | mRNA | 58877817 | 58880254 | 58877817 | ID=Msa0214330-mRNA-1;Parent=Msa0214330;Name=Msa0214330-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|3|0|305 |
| chr2_1 | exon | 58877817 | 58878214 | 58877817 | ID=Msa0214330-mRNA-1:exon:16137;Parent=Msa0214330-mRNA-1 |
| chr2_1 | exon | 58879534 | 58879638 | 58879534 | ID=Msa0214330-mRNA-1:exon:16138;Parent=Msa0214330-mRNA-1 |
| chr2_1 | exon | 58879840 | 58880254 | 58879840 | ID=Msa0214330-mRNA-1:exon:16139;Parent=Msa0214330-mRNA-1 |
| chr2_1 | CDS | 58877817 | 58878214 | 58877817 | ID=Msa0214330-mRNA-1:cds;Parent=Msa0214330-mRNA-1 |
| chr2_1 | CDS | 58879534 | 58879638 | 58879534 | ID=Msa0214330-mRNA-1:cds;Parent=Msa0214330-mRNA-1 |
| chr2_1 | CDS | 58879840 | 58880254 | 58879840 | ID=Msa0214330-mRNA-1:cds;Parent=Msa0214330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
