AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0215280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0215280 MtrunA17_Chr2g0301851 96.073 764 8 2 1 748 1 758 0.0 1512
Msa0215280 MtrunA17_Chr8g0345011 60.180 776 262 13 1 748 2 758 0.0 882
Msa0215280 MtrunA17_Chr8g0352941 47.668 193 73 5 1 176 2 183 2.61e-48 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0215280 AT3G43240.1 63.137 765 240 11 2 747 1 742 0.0 928

Find 170 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAAACCATTGTGCTTAAT+TGG 0.111739 2_1:-60348339 None:intergenic
ACATATCGATTTCGTATCTT+AGG 0.121783 2_1:+60342991 Msa0215280:five_prime_UTR
CTTTAAGAAACCCATGAATT+AGG 0.165427 2_1:-60343188 None:intergenic
CTAATTCATGGGTTTCTTAA+AGG 0.169230 2_1:+60343189 Msa0215280:five_prime_UTR
GAAGGATGTAATGCAATTTC+TGG 0.171195 2_1:+60348599 Msa0215280:CDS
ACTCACGGTATTAGGTAATT+TGG 0.204870 2_1:-60343935 None:intergenic
TTCTGCTCATATATCACTTT+TGG 0.235466 2_1:+60346497 Msa0215280:CDS
AAAATTGAATTGAATTGAAT+TGG 0.238634 2_1:-60342853 None:intergenic
TTAAAAGGATGCGTGCTTAT+TGG 0.242537 2_1:+60345263 Msa0215280:intron
CCAATTAAGCACAATGGTTT+AGG 0.256560 2_1:+60348339 Msa0215280:CDS
ATTCTTGTTAATTAGTGATT+TGG 0.263223 2_1:+60350472 Msa0215280:three_prime_UTR
GTCTTGACACACCCTGAAAA+TGG 0.263487 2_1:-60343388 None:intergenic
GAGTACCTTACACTATTTAC+TGG 0.275735 2_1:+60344300 Msa0215280:CDS
GCAAGGACTCGGAGCATTTA+AGG 0.276262 2_1:+60349832 Msa0215280:CDS
TTCTTAGCAAAACTTCGATT+TGG 0.283092 2_1:+60343032 Msa0215280:five_prime_UTR
CTGGGTTGATTTGTAGTATT+GGG 0.287319 2_1:+60343246 Msa0215280:five_prime_UTR
TGTGGTGAGTGGGCTCATTT+TGG 0.301828 2_1:+60349797 Msa0215280:CDS
TTAACTCTAGAGCATGATTC+TGG 0.305574 2_1:-60348138 None:intergenic
TTTAAGAAACCCATGAATTA+GGG 0.305634 2_1:-60343187 None:intergenic
CACCAAACACTCACGGTATT+AGG 0.305701 2_1:-60343943 None:intergenic
GGCAGAGGCACTACATTCTA+AGG 0.308299 2_1:+60344075 Msa0215280:CDS
CCCTCAAAATATCCCGAAAA+AGG 0.309480 2_1:-60348270 None:intergenic
TCTTAGCAAAACTTCGATTT+GGG 0.317494 2_1:+60343033 Msa0215280:five_prime_UTR
ACCAAACATTAAAACTATTC+TGG 0.328063 2_1:-60342795 None:intergenic
AACTGCAAATGGTTATTAAC+AGG 0.332403 2_1:+60350329 Msa0215280:exon
AATAATCCACACAAGGCTTC+CGG 0.335869 2_1:-60343907 None:intergenic
TAATTCATGGGTTTCTTAAA+GGG 0.336933 2_1:+60343190 Msa0215280:five_prime_UTR
GCTAGAGAAAACAATATCTT+TGG 0.338685 2_1:-60348067 None:intergenic
AATACGAGATTTCTTCTTTG+TGG 0.345310 2_1:+60345118 Msa0215280:CDS
GAAATTGCATTACATCCTTC+AGG 0.347475 2_1:-60348596 None:intergenic
CAAGAGGAGGCTTTCATGTT+GGG 0.358461 2_1:+60348814 Msa0215280:CDS
AGTCTTCTTGCTGTTCTTAG+TGG 0.359874 2_1:+60343416 Msa0215280:CDS
ATAATCCACACAAGGCTTCC+GGG 0.375399 2_1:-60343906 None:intergenic
CTGGACAAGTTGACTATTCT+CGG 0.378507 2_1:-60346680 None:intergenic
GTAGTATTGGGAAGTTGTTT+TGG 0.379941 2_1:+60343258 Msa0215280:five_prime_UTR
TCTGGGTTGATTTGTAGTAT+TGG 0.384513 2_1:+60343245 Msa0215280:five_prime_UTR
TTAGCATTCAGAACGGCATC+AGG 0.387346 2_1:-60348672 None:intergenic
TTCTGTGCTTGATCCTCAAT+TGG 0.387951 2_1:+60350417 Msa0215280:three_prime_UTR
ATTGGTAAAGGTAGGTTTGT+AGG 0.388619 2_1:+60350435 Msa0215280:three_prime_UTR
ACAGTAGCGCAGCAGGTGAC+TGG 0.395006 2_1:+60349759 Msa0215280:intron
GTGGATTCAAAGATATTATC+TGG 0.397675 2_1:-60348413 None:intergenic
TTAGATGATAGTGGAGAAAT+CGG 0.401326 2_1:+60343850 Msa0215280:CDS
ACCTCTGAGCAAACTCGTAT+TGG 0.406911 2_1:-60348468 None:intergenic
AAATTGAATTGAATTGAATT+GGG 0.407713 2_1:-60342852 None:intergenic
GTGCTTATTGGAGTCATTAG+AGG 0.416010 2_1:+60345275 Msa0215280:CDS
TTTCCGGAACTTTCTTCGTC+CGG 0.421862 2_1:+60343518 Msa0215280:CDS
CATATCGATTTCGTATCTTA+GGG 0.427252 2_1:+60342992 Msa0215280:five_prime_UTR
CATGGACCAACCTCAATGTT+AGG 0.430423 2_1:-60345019 None:intergenic
TTAGGCGTTGCTAGTATTCA+AGG 0.438411 2_1:+60347964 Msa0215280:CDS
TGGCGATGAGACTGAGGGAT+TGG 0.441828 2_1:-60348237 None:intergenic
ACAAAAGCAGAAGCAGAAAC+AGG 0.446336 2_1:+60343457 Msa0215280:CDS
AAACCTACCTTTACCAATTG+AGG 0.447186 2_1:-60350430 None:intergenic
ATGTTGGGAATGGTATCAAT+TGG 0.448776 2_1:+60348829 Msa0215280:CDS
AGACGCTTGTTTCAATGATC+AGG 0.449178 2_1:+60346533 Msa0215280:CDS
GGTTTATTTGGAAACTCCTA+AGG 0.454681 2_1:+60344042 Msa0215280:intron
GGGGATGTAAACTTCAAAAT+CGG 0.456380 2_1:+60346256 Msa0215280:CDS
CCTTGCAAGTAAACAAAATC+CGG 0.457763 2_1:-60343820 None:intergenic
TTCCGGAACTTTCTTCGTCC+GGG 0.458654 2_1:+60343519 Msa0215280:CDS
TTTCCTAGAGCCTATGTACA+TGG 0.458760 2_1:+60350369 Msa0215280:three_prime_UTR
ACGAAGAAAGTTCCGGAAAC+GGG 0.460254 2_1:-60343514 None:intergenic
TTCGTATGCGTGTTCCTACA+TGG 0.465539 2_1:+60346791 Msa0215280:CDS
CGCCCGGACGAAGAAAGTTC+CGG 0.466593 2_1:-60343521 None:intergenic
TTGAAGATAATGGCAGTGAT+AGG 0.469399 2_1:+60348187 Msa0215280:CDS
GACGAAGAAAGTTCCGGAAA+CGG 0.469803 2_1:-60343515 None:intergenic
GAAACAAGCGTCTGCACTAC+CGG 0.469950 2_1:-60346523 None:intergenic
ATCCAAGCCTACCACTGTGC+AGG 0.475502 2_1:-60345146 None:intergenic
GTTCATGGCTAGGAATTGCC+TGG 0.478110 2_1:-60346699 None:intergenic
TCCTTCGTGTCTGCTTCACA+TGG 0.479727 2_1:-60345037 None:intergenic
CGTTCTGAATGCTAAACGTC+TGG 0.484571 2_1:+60348680 Msa0215280:CDS
GTTGGAAAGCATCCCATGTA+TGG 0.489682 2_1:-60344892 None:intergenic
CGAGCAAGTTCATCGAAAGT+AGG 0.491578 2_1:-60343778 None:intergenic
TGTGATAGGCGGCAAGGACT+CGG 0.492876 2_1:+60349821 Msa0215280:CDS
ATGCAATTTCTGGTTCTTCG+AGG 0.493393 2_1:+60348609 Msa0215280:CDS
ACGAGAATCAGTGACCCATT+TGG 0.495130 2_1:-60343111 None:intergenic
TTTATAGATGAACTAGTCTC+AGG 0.496117 2_1:-60345076 None:intergenic
AAATCGCAGAAAACTGCAAA+TGG 0.497504 2_1:+60350318 Msa0215280:CDS
ACAAGGCTTCCGGGGTAGAC+AGG 0.498979 2_1:-60343897 None:intergenic
TGTTCCTACATGGGCTTCAC+AGG 0.500006 2_1:+60346801 Msa0215280:CDS
CTGTGGTATGTGTGGTGAGT+GGG 0.501449 2_1:+60349787 Msa0215280:CDS
CTACGCGAAAACTGATGGGC+TGG 0.502485 2_1:+60350254 Msa0215280:CDS
GGTCAGCAGTTAGATGATAG+TGG 0.504243 2_1:+60343841 Msa0215280:CDS
TTCTTCGTCCGGGCGACTTG+AGG 0.506945 2_1:+60343529 Msa0215280:CDS
TGAAGCAGACACGAAGGAAG+AGG 0.507245 2_1:+60345042 Msa0215280:CDS
TCAAGAGGAGGCTTTCATGT+TGG 0.508202 2_1:+60348813 Msa0215280:CDS
GTCAACAACAGTAGCGCAGC+AGG 0.516609 2_1:+60349752 Msa0215280:intron
CAGGACTACGCGAAAACTGA+TGG 0.518231 2_1:+60350249 Msa0215280:intron
TACCGCTGCCTAGTTATGTT+AGG 0.521476 2_1:+60347946 Msa0215280:CDS
GCTGCTTGGAGAGGAGGTGG+TGG 0.523024 2_1:-60346423 None:intergenic
TGCAATTTCTGGTTCTTCGA+GGG 0.523821 2_1:+60348610 Msa0215280:CDS
CGAGAATAGTCAACTTGTCC+AGG 0.524411 2_1:+60346681 Msa0215280:CDS
CAGAAGGGCAGCGGTAAGCA+TGG 0.527863 2_1:+60344974 Msa0215280:CDS
GATCTTCGAGGCTCGTATGA+AGG 0.532815 2_1:-60346733 None:intergenic
GAAAGCATCCCATGTATGGC+TGG 0.537247 2_1:-60344888 None:intergenic
TAGCAACGCCTAACATAACT+AGG 0.538395 2_1:-60347954 None:intergenic
TTAGCTCATGATGATGTAGA+TGG 0.541719 2_1:+60349618 Msa0215280:CDS
GTAGTACATCCAGCCATACA+TGG 0.542147 2_1:+60344879 Msa0215280:intron
AATGCTGCTTATTGTGTCAC+AGG 0.542245 2_1:+60349643 Msa0215280:CDS
TTAACACTAGCCATGTACAT+AGG 0.543028 2_1:-60350379 None:intergenic
CGGGGAACCTCCTAACATTG+AGG 0.543799 2_1:+60345009 Msa0215280:CDS
AGTTCTAGAACAACTGCAGC+CGG 0.546683 2_1:+60343801 Msa0215280:CDS
GCTACTGAAGCTGATCTTCG+AGG 0.548233 2_1:-60346745 None:intergenic
GAGAAATCGGGTCTCTTGTG+TGG 0.548757 2_1:+60343863 Msa0215280:CDS
TCGTATGCGTGTTCCTACAT+GGG 0.550060 2_1:+60346792 Msa0215280:CDS
GGAGGCTTTCATGTTGGGAA+TGG 0.550648 2_1:+60348819 Msa0215280:CDS
AGGCAGCGGTATGACACATT+CGG 0.552931 2_1:-60347934 None:intergenic
TTCAAACACACTAGATCCAC+AGG 0.553084 2_1:-60346767 None:intergenic
CAAGGCCACCTTGTGGAATG+AGG 0.556124 2_1:-60348641 None:intergenic
CTTGTTTCAATGATCAGGCA+CGG 0.556320 2_1:+60346538 Msa0215280:CDS
GTTGCTGCTTGGAGAGGAGG+TGG 0.556794 2_1:-60346426 None:intergenic
CAGTAGCGCAGCAGGTGACT+GGG 0.557484 2_1:+60349760 Msa0215280:intron
GCTTGATCCTCAATTGGTAA+AGG 0.557537 2_1:+60350423 Msa0215280:three_prime_UTR
TAAAAGATGACTGAGCAAGT+TGG 0.561412 2_1:-60344910 None:intergenic
AGAAGGGCAGCGGTAAGCAT+GGG 0.561887 2_1:+60344975 Msa0215280:CDS
TTGTTTCAATGATCAGGCAC+GGG 0.562754 2_1:+60346539 Msa0215280:CDS
ACAGGATGATGATGCTTCTG+AGG 0.570926 2_1:+60343475 Msa0215280:CDS
AGCCATTACCTCAAGTCGCC+CGG 0.573484 2_1:-60343537 None:intergenic
CGGCATCAGGGAACTCAGCA+AGG 0.574376 2_1:-60348659 None:intergenic
ACAAACTTACTTCAGTACAT+AGG 0.576760 2_1:-60345314 None:intergenic
GGCGTGAAAGTTGAAGATAA+TGG 0.577013 2_1:+60348177 Msa0215280:CDS
CTTAGCAAAACTTCGATTTG+GGG 0.580554 2_1:+60343034 Msa0215280:five_prime_UTR
TGCGTGAGAATGTTGCTGCT+TGG 0.581290 2_1:-60346437 None:intergenic
TCCAAGCCTACCACTGTGCA+GGG 0.581847 2_1:-60345145 None:intergenic
TTTGGTTGTGATAGGCGGCA+AGG 0.582920 2_1:+60349815 Msa0215280:CDS
GATCCTCAATTGGTAAAGGT+AGG 0.585308 2_1:+60350427 Msa0215280:three_prime_UTR
TAGCCATGTACATAGGCTCT+AGG 0.590026 2_1:-60350372 None:intergenic
TTGTGCTTAATTGGAACAAG+AGG 0.590937 2_1:-60348330 None:intergenic
AATGTTGCTGCTTGGAGAGG+AGG 0.594965 2_1:-60346429 None:intergenic
AGAAATCGGGTCTCTTGTGT+GGG 0.595440 2_1:+60343864 Msa0215280:CDS
GCTGGAGGCATCAACCAACT+AGG 0.596103 2_1:-60348093 None:intergenic
ACTGTGGTATGTGTGGTGAG+TGG 0.596504 2_1:+60349786 Msa0215280:CDS
GAACCTCCTAACATTGAGGT+TGG 0.596722 2_1:+60345013 Msa0215280:CDS
TCTACCCCGGAAGCCTTGTG+TGG 0.602418 2_1:+60343901 Msa0215280:CDS
AGGACTACGCGAAAACTGAT+GGG 0.603153 2_1:+60350250 Msa0215280:intron
CGCCTAACATAACTAGGCAG+CGG 0.603194 2_1:-60347948 None:intergenic
CTTGTTCCAATTAAGCACAA+TGG 0.603232 2_1:+60348333 Msa0215280:CDS
TAGATGATAGTGGAGAAATC+GGG 0.606612 2_1:+60343851 Msa0215280:CDS
GGGAATGGTATCAATTGGAA+AGG 0.606924 2_1:+60348834 Msa0215280:CDS
TAATCCACACAAGGCTTCCG+GGG 0.610738 2_1:-60343905 None:intergenic
CGTGGATATATCACAGCGCA+TGG 0.614411 2_1:-60346469 None:intergenic
GTTAAATCTATCAATGCTAG+TGG 0.615417 2_1:+60348156 Msa0215280:CDS
CATTAAGGGTGAAACAGTAG+AGG 0.618206 2_1:+60343314 Msa0215280:five_prime_UTR
GAGGCATCAACCAACTAGGA+TGG 0.619735 2_1:-60348089 None:intergenic
CATACCTCACAACAGTCAGA+AGG 0.629474 2_1:+60344958 Msa0215280:CDS
CACAACAGTCAGAAGGGCAG+CGG 0.630640 2_1:+60344965 Msa0215280:CDS
TGGGTGAACTGTGGTATGTG+TGG 0.638192 2_1:+60349779 Msa0215280:CDS
TTATTGGAGTCATTAGAGGA+TGG 0.641905 2_1:+60345279 Msa0215280:CDS
AACTCAGCAAGGCCACCTTG+TGG 0.644829 2_1:-60348648 None:intergenic
GTTTATTTGGAAACTCCTAA+GGG 0.646559 2_1:+60344043 Msa0215280:CDS
GAGAATGTTGCTGCTTGGAG+AGG 0.646813 2_1:-60346432 None:intergenic
TAGCATTCAGAACGGCATCA+GGG 0.648273 2_1:-60348671 None:intergenic
GGACCAACCTCAATGTTAGG+AGG 0.648984 2_1:-60345016 None:intergenic
TAGTACATCCAGCCATACAT+GGG 0.649585 2_1:+60344880 Msa0215280:intron
CTGCCCTTCTGACTGTTGTG+AGG 0.649813 2_1:-60344962 None:intergenic
AGATCAGCTTCAGTAGCCTG+TGG 0.650358 2_1:+60346751 Msa0215280:CDS
ATACCTCACAACAGTCAGAA+GGG 0.652494 2_1:+60344959 Msa0215280:CDS
TTAACCTGTGAAGCCCATGT+AGG 0.655672 2_1:-60346805 None:intergenic
GGAAGAAAATAATCCACACA+AGG 0.664859 2_1:-60343914 None:intergenic
CAGACGTTTAGCATTCAGAA+CGG 0.667993 2_1:-60348679 None:intergenic
GTAAACTTCAAAATCGGACA+AGG 0.680009 2_1:+60346262 Msa0215280:CDS
CATACTCGCCTCATTCCACA+AGG 0.680159 2_1:+60348633 Msa0215280:CDS
AGCAACATTCTCACGCAGCG+TGG 0.682119 2_1:+60346443 Msa0215280:CDS
TTGTGGATTTCCCTGCACAG+TGG 0.689802 2_1:+60345135 Msa0215280:CDS
TCCAATACGAGTTTGCTCAG+AGG 0.694110 2_1:+60348467 Msa0215280:CDS
ACTATACTGTGTGCAAAACG+AGG 0.696352 2_1:+60344934 Msa0215280:CDS
GTGACAGGAGGACTTCCTGA+AGG 0.699500 2_1:+60348581 Msa0215280:intron
TCCATGTGAAGCAGACACGA+AGG 0.700858 2_1:+60345036 Msa0215280:CDS
ACTCGCCTCATTCCACAAGG+TGG 0.716807 2_1:+60348636 Msa0215280:CDS
TATATGAGCAGAACTAGACG+TGG 0.718027 2_1:-60346487 None:intergenic
GCAGGTGACTGGGTGAACTG+TGG 0.732040 2_1:+60349770 Msa0215280:CDS
AAATTTGACATGCTGCAGTG+TGG 0.732794 2_1:-60350288 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCAATCTTATAAAT+TGG + chr2_1:60342947-60342966 Msa0215280:five_prime_UTR 10.0%
!!! TTTTTTCAATCTTATAAATT+GGG + chr2_1:60342948-60342967 Msa0215280:five_prime_UTR 10.0%
!!! AAAATTTTACTTAATTCTAA+TGG - chr2_1:60343720-60343739 None:intergenic 10.0%
!!! ATTTAATGTTTGTTAAAAAT+TGG + chr2_1:60346881-60346900 Msa0215280:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345763-60345782 Msa0215280:intron 100.0%
!! AAATTGAATTGAATTGAATT+GGG - chr2_1:60342855-60342874 None:intergenic 15.0%
!! AAAATTGAATTGAATTGAAT+TGG - chr2_1:60342856-60342875 None:intergenic 15.0%
!!! TTTGTTTTTTATCTGTTTTA+AGG + chr2_1:60343688-60343707 Msa0215280:intron 15.0%
!!! TTACTTTATATGTTTTTGTT+AGG + chr2_1:60344232-60344251 Msa0215280:intron 15.0%
!!! TACAATTTTTTGTCAAATAA+CGG + chr2_1:60344530-60344549 Msa0215280:intron 15.0%
!! GAAATAAATCAGTTTATAAT+AGG - chr2_1:60345229-60345248 None:intergenic 15.0%
!!! TAAATTGTACCTTTTATTTA+TGG + chr2_1:60347826-60347845 Msa0215280:intron 15.0%
!!! ACTTATTCTTTTTTCATTAA+TGG + chr2_1:60347872-60347891 Msa0215280:intron 15.0%
!!! ATTCAATTCAATTTTGTTTG+TGG + chr2_1:60342861-60342880 Msa0215280:five_prime_UTR 20.0%
!!! TATAAATTGGGTTTTTAGTT+TGG + chr2_1:60342960-60342979 Msa0215280:five_prime_UTR 20.0%
!!! AAAGCTAAAACTTTGATTTT+TGG + chr2_1:60343216-60343235 Msa0215280:five_prime_UTR 20.0%
!!! TTACTTCATGATATTTTTGT+AGG + chr2_1:60344021-60344040 Msa0215280:intron 20.0%
!!! GATATTTTTGTAGGTTTATT+TGG + chr2_1:60344030-60344049 Msa0215280:intron 20.0%
!! GAGTATAATTAATGAGATTA+AGG + chr2_1:60344171-60344190 Msa0215280:intron 20.0%
!! CTTAATCAGTGATTATTAAA+CGG + chr2_1:60344258-60344277 Msa0215280:intron 20.0%
!!! TTTTTAAATATTACTGTTCC+TGG + chr2_1:60344421-60344440 Msa0215280:intron 20.0%
!! AAAAACACTATTCAAGAAAT+AGG - chr2_1:60344833-60344852 None:intergenic 20.0%
!! ACAATTGTAGTAATTGTTAT+AGG + chr2_1:60345438-60345457 Msa0215280:intron 20.0%
!! TGTAATCAATGTATTACTTA+AGG + chr2_1:60345578-60345597 Msa0215280:intron 20.0%
!! TATTTCCTTAAATCATTGAA+CGG + chr2_1:60345734-60345753 Msa0215280:intron 20.0%
!! AACAATCACTTAAATTATGA+GGG - chr2_1:60346159-60346178 None:intergenic 20.0%
!! AAACAATCACTTAAATTATG+AGG - chr2_1:60346160-60346179 None:intergenic 20.0%
!! ATAACATTGTAAGTAAAAGA+CGG - chr2_1:60346360-60346379 None:intergenic 20.0%
!!! TAATTGTTTTTTCTTTCTCA+AGG + chr2_1:60346825-60346844 Msa0215280:intron 20.0%
!!! CAATACATGTAATTTAAGTT+TGG + chr2_1:60347390-60347409 Msa0215280:intron 20.0%
!! CTACAGAACTTTATTATTAA+CGG - chr2_1:60347654-60347673 None:intergenic 20.0%
!! TATATATGTTAGACACTTTA+TGG + chr2_1:60347718-60347737 Msa0215280:intron 20.0%
!! ATGTAAGGAAATGTTTAATA+AGG - chr2_1:60348938-60348957 None:intergenic 20.0%
!! TTTCCTAAAAGTAAAATTCT+AGG - chr2_1:60349004-60349023 None:intergenic 20.0%
!! GTATAAAATCATACTAAACT+AGG - chr2_1:60349164-60349183 None:intergenic 20.0%
!! CAAACTTTATGAATAAATTG+AGG + chr2_1:60349448-60349467 Msa0215280:intron 20.0%
!!! ATTGAGAAAATGATACTTTT+GGG + chr2_1:60349490-60349509 Msa0215280:intron 20.0%
!! ATTTCCATAATATTGTATAC+AGG - chr2_1:60349519-60349538 None:intergenic 20.0%
!! TAATCCAACAAATATAAAGT+CGG - chr2_1:60349916-60349935 None:intergenic 20.0%
!! TATGAAATGAAACTGATAAA+AGG + chr2_1:60349973-60349992 Msa0215280:intron 20.0%
!! ATTCTTGTTAATTAGTGATT+TGG + chr2_1:60350472-60350491 Msa0215280:three_prime_UTR 20.0%
!!! ACCAGAATAGTTTTAATGTT+TGG + chr2_1:60342794-60342813 Msa0215280:five_prime_UTR 25.0%
! ACCAAACATTAAAACTATTC+TGG - chr2_1:60342798-60342817 None:intergenic 25.0%
! TTTAAGAAACCCATGAATTA+GGG - chr2_1:60343190-60343209 None:intergenic 25.0%
! TAATTCATGGGTTTCTTAAA+GGG + chr2_1:60343190-60343209 Msa0215280:five_prime_UTR 25.0%
!!! TTTGATTTTTGGTTTCTTTC+TGG + chr2_1:60343227-60343246 Msa0215280:five_prime_UTR 25.0%
!!! TTGATTTTTGGTTTCTTTCT+GGG + chr2_1:60343228-60343247 Msa0215280:five_prime_UTR 25.0%
!! ATATATGATGTTCCATTTTC+AGG + chr2_1:60343376-60343395 Msa0215280:exon 25.0%
!! TATATGATGTTCCATTTTCA+GGG + chr2_1:60343377-60343396 Msa0215280:exon 25.0%
!! TTAACTTTTCATGTGAATTC+AGG + chr2_1:60343738-60343757 Msa0215280:intron 25.0%
!!! ACTACATTCTAAGGTTATAT+TGG + chr2_1:60344084-60344103 Msa0215280:intron 25.0%
!! AAGACAATCTATACTTCTTT+TGG + chr2_1:60344110-60344129 Msa0215280:intron 25.0%
!! AGACAATCTATACTTCTTTT+GGG + chr2_1:60344111-60344130 Msa0215280:intron 25.0%
!! TTTTTCCAGTAAATAGTGTA+AGG - chr2_1:60344308-60344327 None:intergenic 25.0%
!!! GTGTTTTTGTTTATGATAGT+TGG + chr2_1:60344845-60344864 Msa0215280:intron 25.0%
! TTGTAATAGTTCTTACAATG+TGG + chr2_1:60345203-60345222 Msa0215280:intron 25.0%
!!! AATTGTTATAGGTTAGTTTG+TGG + chr2_1:60345449-60345468 Msa0215280:intron 25.0%
!! TTATCACATTTTTCACCTTT+TGG + chr2_1:60345549-60345568 Msa0215280:intron 25.0%
! TTGATTACATTATCTCCAAA+AGG - chr2_1:60345567-60345586 None:intergenic 25.0%
! CATTATGTTTGTTCCTAATT+GGG + chr2_1:60345634-60345653 Msa0215280:intron 25.0%
!! TTTTGTATCATAGCTTCTTT+AGG - chr2_1:60345682-60345701 None:intergenic 25.0%
!! GTTTCTGTTATAGTTTTTCT+TGG - chr2_1:60345999-60346018 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr2_1:60346059-60346078 Msa0215280:intron 25.0%
!! ATGTTTTTCTGTTTTCACTT+TGG + chr2_1:60346218-60346237 Msa0215280:intron 25.0%
!!! AAGGTAGTTTATTTTGTTCA+TGG - chr2_1:60346717-60346736 None:intergenic 25.0%
! TTTCAACTAAACCATTTGAT+TGG - chr2_1:60346918-60346937 None:intergenic 25.0%
!! TTTGCAATTTTATGAACGAA+AGG + chr2_1:60347118-60347137 Msa0215280:intron 25.0%
! CGTTAATAATAAAGTTCTGT+AGG + chr2_1:60347652-60347671 Msa0215280:intron 25.0%
! AAACTGTAAAATGAAACTAC+AGG - chr2_1:60347755-60347774 None:intergenic 25.0%
!!! TTTTTTCATTAATGGCTTCT+TGG + chr2_1:60347880-60347899 Msa0215280:intron 25.0%
!! GTCTTCTTTTCTTTTGTAAT+CGG + chr2_1:60348025-60348044 Msa0215280:CDS 25.0%
!!! TCTTTTTAACTTGTATAGAG+AGG + chr2_1:60348704-60348723 Msa0215280:CDS 25.0%
!! CTAAGAAACTTGAGTATTTT+AGG + chr2_1:60348785-60348804 Msa0215280:intron 25.0%
! CTCAAAATGTAAGATTATCT+AGG - chr2_1:60349048-60349067 None:intergenic 25.0%
! TTAGTAATCCATTCCTTATT+AGG + chr2_1:60349086-60349105 Msa0215280:intron 25.0%
!! CATTGAGAAAATGATACTTT+TGG + chr2_1:60349489-60349508 Msa0215280:intron 25.0%
!!! TAATTTCTTTTTGCTGTTGT+AGG + chr2_1:60349542-60349561 Msa0215280:intron 25.0%
!!! AATTTCTTTTTGCTGTTGTA+GGG + chr2_1:60349543-60349562 Msa0215280:intron 25.0%
! AGGTATTAATCAACAATATC+AGG + chr2_1:60349852-60349871 Msa0215280:intron 25.0%
! TGTTGGATTATGATCAATAT+AGG + chr2_1:60349926-60349945 Msa0215280:intron 25.0%
!!! GCTGTTTTCTTAAACTATAT+TGG + chr2_1:60350083-60350102 Msa0215280:intron 25.0%
!! TTTTAACCCTTTATGATGAA+TGG + chr2_1:60350226-60350245 Msa0215280:intron 25.0%
!! ATAATGCCAGAAAATTTTGA+TGG - chr2_1:60350529-60350548 None:intergenic 25.0%
! AAAATCACGAAGAGACTTTT+TGG - chr2_1:60342895-60342914 None:intergenic 30.0%
!! ACATATCGATTTCGTATCTT+AGG + chr2_1:60342991-60343010 Msa0215280:five_prime_UTR 30.0%
!! CATATCGATTTCGTATCTTA+GGG + chr2_1:60342992-60343011 Msa0215280:five_prime_UTR 30.0%
TTCTTAGCAAAACTTCGATT+TGG + chr2_1:60343032-60343051 Msa0215280:five_prime_UTR 30.0%
TCTTAGCAAAACTTCGATTT+GGG + chr2_1:60343033-60343052 Msa0215280:five_prime_UTR 30.0%
!! TTTTCTTCGTTTTGACCAAA+TGG + chr2_1:60343096-60343115 Msa0215280:five_prime_UTR 30.0%
!! TTTCTTCGTTTTGACCAAAT+GGG + chr2_1:60343097-60343116 Msa0215280:five_prime_UTR 30.0%
!!! ATTCTCGTTTTAGTTTCTTC+TGG + chr2_1:60343126-60343145 Msa0215280:five_prime_UTR 30.0%
!!! TTCTCGTTTTAGTTTCTTCT+GGG + chr2_1:60343127-60343146 Msa0215280:five_prime_UTR 30.0%
!! TTTTGCTTTTCCCTAATTCA+TGG + chr2_1:60343177-60343196 Msa0215280:five_prime_UTR 30.0%
!! TTTGCTTTTCCCTAATTCAT+GGG + chr2_1:60343178-60343197 Msa0215280:five_prime_UTR 30.0%
! CTTTAAGAAACCCATGAATT+AGG - chr2_1:60343191-60343210 None:intergenic 30.0%
CTAATTCATGGGTTTCTTAA+AGG + chr2_1:60343189-60343208 Msa0215280:five_prime_UTR 30.0%
!!! AGTTGTTTTGGTGTTGATTT+TGG + chr2_1:60343270-60343289 Msa0215280:five_prime_UTR 30.0%
!!! GGTAATAGTAGAGTTTTTTG+AGG + chr2_1:60343291-60343310 Msa0215280:five_prime_UTR 30.0%
!!! TAGAGTTTTTTGAGGCATTA+AGG + chr2_1:60343299-60343318 Msa0215280:five_prime_UTR 30.0%
!!! AGAGTTTTTTGAGGCATTAA+GGG + chr2_1:60343300-60343319 Msa0215280:five_prime_UTR 30.0%
!! TTAGATGATAGTGGAGAAAT+CGG + chr2_1:60343850-60343869 Msa0215280:CDS 30.0%
GTTTATTTGGAAACTCCTAA+GGG + chr2_1:60344043-60344062 Msa0215280:CDS 30.0%
ATATGTTAACTAAGATGTGC+TGG + chr2_1:60344144-60344163 Msa0215280:intron 30.0%
AATGAGATTAAGGCTAAACT+AGG + chr2_1:60344181-60344200 Msa0215280:intron 30.0%
ATGAGATTAAGGCTAAACTA+GGG + chr2_1:60344182-60344201 Msa0215280:intron 30.0%
AATCAGTGATTATTAAACGG+AGG + chr2_1:60344261-60344280 Msa0215280:intron 30.0%
TTGTTAAATAGCAGCTATAG+TGG + chr2_1:60344450-60344469 Msa0215280:intron 30.0%
TTGTACTAAATAGCATGTCT+CGG - chr2_1:60344515-60344534 None:intergenic 30.0%
! CTTTTTATGCAGATAGCAAT+AGG + chr2_1:60344711-60344730 Msa0215280:intron 30.0%
ACACTTCTCTCTTATTACTT+CGG + chr2_1:60344750-60344769 Msa0215280:intron 30.0%
! TTTATAGATGAACTAGTCTC+AGG - chr2_1:60345079-60345098 None:intergenic 30.0%
AATACGAGATTTCTTCTTTG+TGG + chr2_1:60345118-60345137 Msa0215280:CDS 30.0%
ACAAACTTACTTCAGTACAT+AGG - chr2_1:60345317-60345336 None:intergenic 30.0%
! TGAAGTAAGTTTGTTTCACA+CGG + chr2_1:60345323-60345342 Msa0215280:intron 30.0%
TATTACTTAAGGCATATGCA+TGG + chr2_1:60345589-60345608 Msa0215280:intron 30.0%
CCAATTAGGAACAAACATAA+TGG - chr2_1:60345636-60345655 None:intergenic 30.0%
CCATTATGTTTGTTCCTAAT+TGG + chr2_1:60345633-60345652 Msa0215280:intron 30.0%
GAGAATAAAATAAGCGTAGT+GGG + chr2_1:60345809-60345828 Msa0215280:intron 30.0%
AGAATAAAATAAGCGTAGTG+GGG + chr2_1:60345810-60345829 Msa0215280:intron 30.0%
ATGAGAACATTAGAGAGTTA+AGG + chr2_1:60345886-60345905 Msa0215280:intron 30.0%
! ACGATTTAGAGTTAATGAGT+TGG + chr2_1:60346027-60346046 Msa0215280:intron 30.0%
! TAATGAGTTGGATCGAAATA+TGG + chr2_1:60346039-60346058 Msa0215280:intron 30.0%
! TTCTGCTCATATATCACTTT+TGG + chr2_1:60346497-60346516 Msa0215280:CDS 30.0%
TGCTCAGTAAAAAGTTAAGA+GGG - chr2_1:60346603-60346622 None:intergenic 30.0%
ATGCTCAGTAAAAAGTTAAG+AGG - chr2_1:60346604-60346623 None:intergenic 30.0%
!!! AGTTTATTTTGTTCATGGCT+AGG - chr2_1:60346712-60346731 None:intergenic 30.0%
!! TTGAGTTTTGACCAATCAAA+TGG + chr2_1:60346904-60346923 Msa0215280:intron 30.0%
TCTTCTGTTAATTTAACAGC+TGG + chr2_1:60346940-60346959 Msa0215280:intron 30.0%
TTACTTGAATGAACTTGGTA+TGG + chr2_1:60346964-60346983 Msa0215280:intron 30.0%
GAATTTGCAAGATGCTAAAT+TGG + chr2_1:60347004-60347023 Msa0215280:intron 30.0%
GATGATAAAATAGTGCTACA+AGG + chr2_1:60347095-60347114 Msa0215280:intron 30.0%
TTATATCACCTTAACGTGAT+CGG + chr2_1:60347181-60347200 Msa0215280:intron 30.0%
TGTGTTTATGTTGCAAAAGA+AGG - chr2_1:60347311-60347330 None:intergenic 30.0%
! GGAAACTATTGAAGACTTTT+AGG + chr2_1:60347411-60347430 Msa0215280:intron 30.0%
TTGTCAAATAGAAGCTATAG+TGG + chr2_1:60347458-60347477 Msa0215280:intron 30.0%
! AAAGTTTGTGTTGTTAAACC+TGG - chr2_1:60347631-60347650 None:intergenic 30.0%
ACTTCTATACCAATACAGAT+AGG + chr2_1:60347785-60347804 Msa0215280:intron 30.0%
TCATTGCAGCCATAAATAAA+AGG - chr2_1:60347838-60347857 None:intergenic 30.0%
GCTAGAGAAAACAATATCTT+TGG - chr2_1:60348070-60348089 None:intergenic 30.0%
GTTAAATCTATCAATGCTAG+TGG + chr2_1:60348156-60348175 Msa0215280:CDS 30.0%
! AATTAAGTTTTGCTGCAATG+AGG + chr2_1:60348214-60348233 Msa0215280:CDS 30.0%
TTTGAGGGAGAAAAATATGA+TGG + chr2_1:60348285-60348304 Msa0215280:CDS 30.0%
GTGGATTCAAAGATATTATC+TGG - chr2_1:60348416-60348435 None:intergenic 30.0%
AAGGTCAACAAAAACATATG+CGG - chr2_1:60348499-60348518 None:intergenic 30.0%
! TTTTAGATCCGACGTAAAAT+AGG - chr2_1:60348535-60348554 None:intergenic 30.0%
!! AGAAACTTGAGTATTTTAGG+TGG + chr2_1:60348788-60348807 Msa0215280:intron 30.0%
!! CAGCCTAGAATTTTACTTTT+AGG + chr2_1:60348998-60349017 Msa0215280:intron 30.0%
!!! TTACTTTTAGGAAAAGTACC+AGG + chr2_1:60349010-60349029 Msa0215280:intron 30.0%
TGTAAGATTATCTAGGTAGA+GGG - chr2_1:60349041-60349060 None:intergenic 30.0%
ATGTAAGATTATCTAGGTAG+AGG - chr2_1:60349042-60349061 None:intergenic 30.0%
!!! TCTTACATTTTGAGTTCTAC+TGG + chr2_1:60349054-60349073 Msa0215280:intron 30.0%
ACAAGATTCCTAATAAGGAA+TGG - chr2_1:60349097-60349116 None:intergenic 30.0%
AAGGTACAAGATTCCTAATA+AGG - chr2_1:60349102-60349121 None:intergenic 30.0%
ATACTAAACTAGGAACATTG+AGG - chr2_1:60349154-60349173 None:intergenic 30.0%
AGAAACTAGTAAGAAAGACA+TGG + chr2_1:60349212-60349231 Msa0215280:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr2_1:60349232-60349251 Msa0215280:intron 30.0%
ATGATCACCTAAAATGCAAA+TGG + chr2_1:60349349-60349368 Msa0215280:intron 30.0%
GCATCCTGTATACAATATTA+TGG + chr2_1:60349512-60349531 Msa0215280:intron 30.0%
!! ATTGAGTTGATTATCCAAAC+AGG - chr2_1:60350000-60350019 None:intergenic 30.0%
AACTGCAAATGGTTATTAAC+AGG + chr2_1:60350329-60350348 Msa0215280:exon 30.0%
!! TTTGGAATTTTGACACACTA+TGG + chr2_1:60350490-60350509 Msa0215280:three_prime_UTR 30.0%
! AAAAGGCCATCAAAATTTTC+TGG + chr2_1:60350520-60350539 Msa0215280:three_prime_UTR 30.0%
! TTACATTTTCAGCAGCAATA+TGG - chr2_1:60350662-60350681 None:intergenic 30.0%
! CTTAGCAAAACTTCGATTTG+GGG + chr2_1:60343034-60343053 Msa0215280:five_prime_UTR 35.0%
!! TCTGGGTTGATTTGTAGTAT+TGG + chr2_1:60343245-60343264 Msa0215280:five_prime_UTR 35.0%
!! CTGGGTTGATTTGTAGTATT+GGG + chr2_1:60343246-60343265 Msa0215280:five_prime_UTR 35.0%
!! GTAGTATTGGGAAGTTGTTT+TGG + chr2_1:60343258-60343277 Msa0215280:five_prime_UTR 35.0%
CCTTGCAAGTAAACAAAATC+CGG - chr2_1:60343823-60343842 None:intergenic 35.0%
!! TAGATGATAGTGGAGAAATC+GGG + chr2_1:60343851-60343870 Msa0215280:CDS 35.0%
GGAAGAAAATAATCCACACA+AGG - chr2_1:60343917-60343936 None:intergenic 35.0%
ACTCACGGTATTAGGTAATT+TGG - chr2_1:60343938-60343957 None:intergenic 35.0%
AATTATCCACCAAACACTCA+CGG - chr2_1:60343953-60343972 None:intergenic 35.0%
TCTTCTGTGATTGTTTGACA+TGG + chr2_1:60343974-60343993 Msa0215280:intron 35.0%
GACATGGATGGTATAATGTT+TGG + chr2_1:60343990-60344009 Msa0215280:intron 35.0%
GGTTTATTTGGAAACTCCTA+AGG + chr2_1:60344042-60344061 Msa0215280:intron 35.0%
GAGTACCTTACACTATTTAC+TGG + chr2_1:60344300-60344319 Msa0215280:CDS 35.0%
!!! TCATCAAGCTTTTTTCTCAG+TGG + chr2_1:60344358-60344377 Msa0215280:intron 35.0%
GTATTAGTCATCTACCATCT+TGG + chr2_1:60344388-60344407 Msa0215280:intron 35.0%
! AAAAGCATGACAATCCAAGA+TGG - chr2_1:60344405-60344424 None:intergenic 35.0%
! TAGCTGCTATTTAACAACAC+TGG - chr2_1:60344447-60344466 None:intergenic 35.0%
TGTACTAAATAGCATGTCTC+GGG - chr2_1:60344514-60344533 None:intergenic 35.0%
AACAAATCACTGTTGTTGTG+AGG + chr2_1:60344568-60344587 Msa0215280:intron 35.0%
TCTGCATAAAAAGAGATGCA+CGG - chr2_1:60344704-60344723 None:intergenic 35.0%
GAAGTAATAAGAGAGAAGTG+TGG - chr2_1:60344751-60344770 None:intergenic 35.0%
TAAAAGATGACTGAGCAAGT+TGG - chr2_1:60344913-60344932 None:intergenic 35.0%
CATCTCTCATCTCTCTTAAA+AGG + chr2_1:60345248-60345267 Msa0215280:intron 35.0%
TTAAAAGGATGCGTGCTTAT+TGG + chr2_1:60345263-60345282 Msa0215280:intron 35.0%
TTATTGGAGTCATTAGAGGA+TGG + chr2_1:60345279-60345298 Msa0215280:CDS 35.0%
!! GTTTATCCGTTACTGCTTTT+TGG + chr2_1:60345362-60345381 Msa0215280:intron 35.0%
CTCAGATAACTTCAAATGCA+TGG + chr2_1:60345409-60345428 Msa0215280:intron 35.0%
ACACTCCGTTCAATGATTTA+AGG - chr2_1:60345742-60345761 None:intergenic 35.0%
TAAATCATTGAACGGAGTGT+TGG + chr2_1:60345742-60345761 Msa0215280:intron 35.0%
! AAATCATTGAACGGAGTGTT+GGG + chr2_1:60345743-60345762 Msa0215280:intron 35.0%
CGAGAATAAAATAAGCGTAG+TGG + chr2_1:60345808-60345827 Msa0215280:intron 35.0%
AGCACCTATAGTAGTAAAGA+TGG + chr2_1:60345910-60345929 Msa0215280:intron 35.0%
ACCTATAGTAGTAAAGATGG+TGG + chr2_1:60345913-60345932 Msa0215280:intron 35.0%
TCCACCATCTTTACTACTAT+AGG - chr2_1:60345917-60345936 None:intergenic 35.0%
!! TAGTAGTAAAGATGGTGGAT+AGG + chr2_1:60345918-60345937 Msa0215280:intron 35.0%
TTTATCCCAATAAGTGGGAT+TGG - chr2_1:60346104-60346123 None:intergenic 35.0%
! CAAGCTTTATCCCAATAAGT+GGG - chr2_1:60346109-60346128 None:intergenic 35.0%
!!! CTTTGGCTTTTCTACAGATA+CGG + chr2_1:60346235-60346254 Msa0215280:intron 35.0%
!!! TTTGGCTTTTCTACAGATAC+GGG + chr2_1:60346236-60346255 Msa0215280:intron 35.0%
GGGGATGTAAACTTCAAAAT+CGG + chr2_1:60346256-60346275 Msa0215280:CDS 35.0%
GTAAACTTCAAAATCGGACA+AGG + chr2_1:60346262-60346281 Msa0215280:CDS 35.0%
! TCAAAATCGGACAAGGTATT+TGG + chr2_1:60346269-60346288 Msa0215280:intron 35.0%
!!! CATATATCACTTTTGGTGTC+CGG + chr2_1:60346504-60346523 Msa0215280:CDS 35.0%
! TTATGTGTTTCCTCAGCTTT+TGG + chr2_1:60346633-60346652 Msa0215280:intron 35.0%
ATATGATTCTCCAAAAGCTG+AGG - chr2_1:60346646-60346665 None:intergenic 35.0%
TTCTCAAGGTTTATGTCAGT+TGG + chr2_1:60346839-60346858 Msa0215280:intron 35.0%
TGGCATTTAGTGAATAGAGT+AGG + chr2_1:60347024-60347043 Msa0215280:intron 35.0%
!! AAGACTTTTAGGCTGATTTC+TGG + chr2_1:60347422-60347441 Msa0215280:intron 35.0%
TACTTTGTCTAACATGAGTG+CGG - chr2_1:60347700-60347719 None:intergenic 35.0%
AAGAATAAGTCCACGAAGTA+TGG - chr2_1:60347862-60347881 None:intergenic 35.0%
! GCTTCTTGGTATTTGTTAAC+AGG + chr2_1:60347894-60347913 Msa0215280:intron 35.0%
! TCTTTTCTTTTGTAATCGGC+AGG + chr2_1:60348029-60348048 Msa0215280:CDS 35.0%
!! TTAACTCTAGAGCATGATTC+TGG - chr2_1:60348141-60348160 None:intergenic 35.0%
! TTGAAGATAATGGCAGTGAT+AGG + chr2_1:60348187-60348206 Msa0215280:CDS 35.0%
! CCAAAAGCTTCTACCTTTTT+CGG + chr2_1:60348257-60348276 Msa0215280:CDS 35.0%
! CAAAAGCTTCTACCTTTTTC+GGG + chr2_1:60348258-60348277 Msa0215280:CDS 35.0%
!!! ACCTTTTTCGGGATATTTTG+AGG + chr2_1:60348269-60348288 Msa0215280:CDS 35.0%
!!! CCTTTTTCGGGATATTTTGA+GGG + chr2_1:60348270-60348289 Msa0215280:CDS 35.0%
TTGTGCTTAATTGGAACAAG+AGG - chr2_1:60348333-60348352 None:intergenic 35.0%
CTTGTTCCAATTAAGCACAA+TGG + chr2_1:60348333-60348352 Msa0215280:CDS 35.0%
CCTAAACCATTGTGCTTAAT+TGG - chr2_1:60348342-60348361 None:intergenic 35.0%
CCAATTAAGCACAATGGTTT+AGG + chr2_1:60348339-60348358 Msa0215280:CDS 35.0%
!!! CCATGTTTTTTCATTGGTAG+TGG - chr2_1:60348435-60348454 None:intergenic 35.0%
CCACTACCAATGAAAAAACA+TGG + chr2_1:60348432-60348451 Msa0215280:CDS 35.0%
GAAATTGCATTACATCCTTC+AGG - chr2_1:60348599-60348618 None:intergenic 35.0%
GAAGGATGTAATGCAATTTC+TGG + chr2_1:60348599-60348618 Msa0215280:CDS 35.0%
!! GTATTTTAGGTGGTTTCAAG+AGG + chr2_1:60348798-60348817 Msa0215280:intron 35.0%
ATGTTGGGAATGGTATCAAT+TGG + chr2_1:60348829-60348848 Msa0215280:CDS 35.0%
TGACACATAGAATGACAGTA+AGG + chr2_1:60348889-60348908 Msa0215280:intron 35.0%
TGCATGCGCATAATAATGTA+AGG - chr2_1:60348953-60348972 None:intergenic 35.0%
GTAAGATTATCTAGGTAGAG+GGG - chr2_1:60349040-60349059 None:intergenic 35.0%
! TTGTACCTTTTCTTCTGTTG+AGG + chr2_1:60349113-60349132 Msa0215280:intron 35.0%
!!! GTATGTGCCATTTGCATTTT+AGG - chr2_1:60349359-60349378 None:intergenic 35.0%
CAACAAAATAACCAACTTCG+TGG - chr2_1:60349407-60349426 None:intergenic 35.0%
! TTAGCTCATGATGATGTAGA+TGG + chr2_1:60349618-60349637 Msa0215280:CDS 35.0%
TGTTGTTGACACAACATGAA+AGG - chr2_1:60349742-60349761 None:intergenic 35.0%
!! TCTGCCGACTTTATATTTGT+TGG + chr2_1:60349909-60349928 Msa0215280:intron 35.0%
AACTGATAAAAGGTCCTGTT+TGG + chr2_1:60349983-60350002 Msa0215280:intron 35.0%
AGCATAAACACTTACCACAT+AGG + chr2_1:60350031-60350050 Msa0215280:intron 35.0%
CTTTAACATAAGCACCTATG+TGG - chr2_1:60350048-60350067 None:intergenic 35.0%
AAATCGCAGAAAACTGCAAA+TGG + chr2_1:60350318-60350337 Msa0215280:CDS 35.0%
TTAACACTAGCCATGTACAT+AGG - chr2_1:60350382-60350401 None:intergenic 35.0%
AAACCTACCTTTACCAATTG+AGG - chr2_1:60350433-60350452 None:intergenic 35.0%
ATTGGTAAAGGTAGGTTTGT+AGG + chr2_1:60350435-60350454 Msa0215280:three_prime_UTR 35.0%
CACACTATGGTCACAAAAAA+AGG + chr2_1:60350503-60350522 Msa0215280:three_prime_UTR 35.0%
TCCTCTTGAGAAAAAGATAC+AGG + chr2_1:60350560-60350579 Msa0215280:three_prime_UTR 35.0%
! TCCTGTATCTTTTTCTCAAG+AGG - chr2_1:60350564-60350583 None:intergenic 35.0%
CATTAAGGGTGAAACAGTAG+AGG + chr2_1:60343314-60343333 Msa0215280:five_prime_UTR 40.0%
!! AGTCTTCTTGCTGTTCTTAG+TGG + chr2_1:60343416-60343435 Msa0215280:CDS 40.0%
ACAAAAGCAGAAGCAGAAAC+AGG + chr2_1:60343457-60343476 Msa0215280:CDS 40.0%
ATGCATAGCAAGGCTAACAT+AGG - chr2_1:60343601-60343620 None:intergenic 40.0%
!! TTAGCCTTGCTATGCATTAC+CGG + chr2_1:60343604-60343623 Msa0215280:intron 40.0%
ACATTTAGCGGGATAAGACT+CGG + chr2_1:60343648-60343667 Msa0215280:intron 40.0%
!! CCGGATTTTGTTTACTTGCA+AGG + chr2_1:60343820-60343839 Msa0215280:CDS 40.0%
AATAATCCACACAAGGCTTC+CGG - chr2_1:60343910-60343929 None:intergenic 40.0%
TACCTAATACCGTGAGTGTT+TGG + chr2_1:60343941-60343960 Msa0215280:intron 40.0%
CTGTGATTGTTTGACATGGA+TGG + chr2_1:60343978-60343997 Msa0215280:intron 40.0%
AACTCCTAAGGGCGAAAAAT+TGG + chr2_1:60344054-60344073 Msa0215280:CDS 40.0%
! GCTAAACTAGGGTGTTAACT+AGG + chr2_1:60344193-60344212 Msa0215280:intron 40.0%
!!! TTAAACGGAGGTGTTTTGTG+TGG + chr2_1:60344273-60344292 Msa0215280:intron 40.0%
GTACTAAATAGCATGTCTCG+GGG - chr2_1:60344513-60344532 None:intergenic 40.0%
GTATTGTAAAACGAGGATCG+CGG - chr2_1:60344672-60344691 None:intergenic 40.0%
! TCGTTTTACAATACCGTTCC+CGG + chr2_1:60344678-60344697 Msa0215280:intron 40.0%
TTCTCATGCCATGGATTCAT+TGG - chr2_1:60344782-60344801 None:intergenic 40.0%
TAGTACATCCAGCCATACAT+GGG + chr2_1:60344880-60344899 Msa0215280:intron 40.0%
ACTATACTGTGTGCAAAACG+AGG + chr2_1:60344934-60344953 Msa0215280:CDS 40.0%
ATACCTCACAACAGTCAGAA+GGG + chr2_1:60344959-60344978 Msa0215280:CDS 40.0%
AAGCATGGGCCAAAAATTCT+CGG + chr2_1:60344989-60345008 Msa0215280:CDS 40.0%
GTGCTTATTGGAGTCATTAG+AGG + chr2_1:60345275-60345294 Msa0215280:CDS 40.0%
GAGCATCCAAAAAGCAGTAA+CGG - chr2_1:60345371-60345390 None:intergenic 40.0%
GTTTGTTCCTAATTGGGATC+AGG + chr2_1:60345640-60345659 Msa0215280:intron 40.0%
AGTGAAACCTGATCCCAATT+AGG - chr2_1:60345650-60345669 None:intergenic 40.0%
! GTATGTGCTGAAAAGTGCAA+TGG + chr2_1:60345711-60345730 Msa0215280:intron 40.0%
!! AATCATTGAACGGAGTGTTG+GGG + chr2_1:60345744-60345763 Msa0215280:intron 40.0%
TTTATAATCCTATCCTGCCC+AGG - chr2_1:60345867-60345886 None:intergenic 40.0%
!! TAAAGATGGTGGATAGGCTT+AGG + chr2_1:60345924-60345943 Msa0215280:intron 40.0%
GGCATGTAGATTCTGTAGTA+TGG + chr2_1:60345965-60345984 Msa0215280:intron 40.0%
! CCAAGCTTTATCCCAATAAG+TGG - chr2_1:60346110-60346129 None:intergenic 40.0%
CCACTTATTGGGATAAAGCT+TGG + chr2_1:60346107-60346126 Msa0215280:intron 40.0%
!! TTGGCTTTTCTACAGATACG+GGG + chr2_1:60346237-60346256 Msa0215280:intron 40.0%
! AAATCGGACAAGGTATTTGG+TGG + chr2_1:60346272-60346291 Msa0215280:intron 40.0%
TATATGAGCAGAACTAGACG+TGG - chr2_1:60346490-60346509 None:intergenic 40.0%
AGACGCTTGTTTCAATGATC+AGG + chr2_1:60346533-60346552 Msa0215280:CDS 40.0%
CTTGTTTCAATGATCAGGCA+CGG + chr2_1:60346538-60346557 Msa0215280:CDS 40.0%
TTGTTTCAATGATCAGGCAC+GGG + chr2_1:60346539-60346558 Msa0215280:CDS 40.0%
! CTGGACAAGTTGACTATTCT+CGG - chr2_1:60346683-60346702 None:intergenic 40.0%
TTCAAACACACTAGATCCAC+AGG - chr2_1:60346770-60346789 None:intergenic 40.0%
! AGGTTTATGTCAGTTGGTCT+AGG + chr2_1:60346845-60346864 Msa0215280:intron 40.0%
CTGGCTTACTTGAATGAACT+TGG + chr2_1:60346959-60346978 Msa0215280:intron 40.0%
TCTCTACCACATGTATAAGC+TGG + chr2_1:60347144-60347163 Msa0215280:intron 40.0%
CGATTACCAGCTTATACATG+TGG - chr2_1:60347153-60347172 None:intergenic 40.0%
GTTATAGCGTTGTAGCATAG+AGG + chr2_1:60347577-60347596 Msa0215280:intron 40.0%
ACGAGTGTTCCTATCTGTAT+TGG - chr2_1:60347797-60347816 None:intergenic 40.0%
TAGCAACGCCTAACATAACT+AGG - chr2_1:60347957-60347976 None:intergenic 40.0%
! TTAGGCGTTGCTAGTATTCA+AGG + chr2_1:60347964-60347983 Msa0215280:CDS 40.0%
! TTTTCTCTAGCCATCCTAGT+TGG + chr2_1:60348079-60348098 Msa0215280:CDS 40.0%
!!! GGTTCAGATCTTTTTCGACT+AGG - chr2_1:60348120-60348139 None:intergenic 40.0%
GGCGTGAAAGTTGAAGATAA+TGG + chr2_1:60348177-60348196 Msa0215280:CDS 40.0%
! CCGAAAAAGGTAGAAGCTTT+TGG - chr2_1:60348260-60348279 None:intergenic 40.0%
CCCTCAAAATATCCCGAAAA+AGG - chr2_1:60348273-60348292 None:intergenic 40.0%
! GAAAAATATGATGGAGACCG+TGG + chr2_1:60348294-60348313 Msa0215280:CDS 40.0%
!!! GAGGCTGATTTGATTTTCCA+CGG - chr2_1:60348314-60348333 None:intergenic 40.0%
!!! TCGCAGCCATGTTTTTTCAT+TGG - chr2_1:60348441-60348460 None:intergenic 40.0%
AATAGGACTGAAGGTAGCAA+AGG - chr2_1:60348518-60348537 None:intergenic 40.0%
! CCTTCAGTCCTATTTTACGT+CGG + chr2_1:60348524-60348543 Msa0215280:intron 40.0%
!! TTGTTTTTCCCTGTTGTGAC+AGG + chr2_1:60348566-60348585 Msa0215280:intron 40.0%
!! ATGCAATTTCTGGTTCTTCG+AGG + chr2_1:60348609-60348628 Msa0215280:CDS 40.0%
!! TGCAATTTCTGGTTCTTCGA+GGG + chr2_1:60348610-60348629 Msa0215280:CDS 40.0%
CAGACGTTTAGCATTCAGAA+CGG - chr2_1:60348682-60348701 None:intergenic 40.0%
!! TTTTAGGTGGTTTCAAGAGG+AGG + chr2_1:60348801-60348820 Msa0215280:intron 40.0%
GGGAATGGTATCAATTGGAA+AGG + chr2_1:60348834-60348853 Msa0215280:CDS 40.0%
CAAGACCTCAACAGAAGAAA+AGG - chr2_1:60349121-60349140 None:intergenic 40.0%
TATCAAACGACACCACTAAG+TGG - chr2_1:60349283-60349302 None:intergenic 40.0%
GAGAAATTAAGCCACGAAGT+TGG + chr2_1:60349393-60349412 Msa0215280:intron 40.0%
!!! TTTTTGCTGTTGTAGGGTGT+TGG + chr2_1:60349549-60349568 Msa0215280:intron 40.0%
! AATGCTGCTTATTGTGTCAC+AGG + chr2_1:60349643-60349662 Msa0215280:CDS 40.0%
TGTGTCTGAGTATGTGTGTA+AGG + chr2_1:60349684-60349703 Msa0215280:intron 40.0%
!!! CTCATTTTGGTTGTGATAGG+CGG + chr2_1:60349810-60349829 Msa0215280:CDS 40.0%
GAGTATACAAGAGAGTGAGA+TGG + chr2_1:60350186-60350205 Msa0215280:intron 40.0%
AACCCTTTATGATGAATGGC+AGG + chr2_1:60350230-60350249 Msa0215280:intron 40.0%
GTCCTGCCATTCATCATAAA+GGG - chr2_1:60350235-60350254 None:intergenic 40.0%
AGTCCTGCCATTCATCATAA+AGG - chr2_1:60350236-60350255 None:intergenic 40.0%
AAATTTGACATGCTGCAGTG+TGG - chr2_1:60350291-60350310 None:intergenic 40.0%
TTTCCTAGAGCCTATGTACA+TGG + chr2_1:60350369-60350388 Msa0215280:three_prime_UTR 40.0%
TTCTGTGCTTGATCCTCAAT+TGG + chr2_1:60350417-60350436 Msa0215280:three_prime_UTR 40.0%
GCTTGATCCTCAATTGGTAA+AGG + chr2_1:60350423-60350442 Msa0215280:three_prime_UTR 40.0%
GATCCTCAATTGGTAAAGGT+AGG + chr2_1:60350427-60350446 Msa0215280:three_prime_UTR 40.0%
ACGAGAATCAGTGACCCATT+TGG - chr2_1:60343114-60343133 None:intergenic 45.0%
! GGTTTTGCAGTTGTGAGAAG+TGG + chr2_1:60343335-60343354 Msa0215280:five_prime_UTR 45.0%
GTCTTGACACACCCTGAAAA+TGG - chr2_1:60343391-60343410 None:intergenic 45.0%
! ACAGGATGATGATGCTTCTG+AGG + chr2_1:60343475-60343494 Msa0215280:CDS 45.0%
! ATTTTCGTCGTACCCGTTTC+CGG + chr2_1:60343502-60343521 Msa0215280:CDS 45.0%
ACGAAGAAAGTTCCGGAAAC+GGG - chr2_1:60343517-60343536 None:intergenic 45.0%
GACGAAGAAAGTTCCGGAAA+CGG - chr2_1:60343518-60343537 None:intergenic 45.0%
TTTCCGGAACTTTCTTCGTC+CGG + chr2_1:60343518-60343537 Msa0215280:CDS 45.0%
ATAGCAAGGCTAACATAGGC+AGG - chr2_1:60343597-60343616 None:intergenic 45.0%
ATGTAGCCGAGCACATTTAG+CGG + chr2_1:60343636-60343655 Msa0215280:intron 45.0%
CTTATCCCGCTAAATGTGCT+CGG - chr2_1:60343645-60343664 None:intergenic 45.0%
CGAGCAAGTTCATCGAAAGT+AGG - chr2_1:60343781-60343800 None:intergenic 45.0%
!! AGTTCTAGAACAACTGCAGC+CGG + chr2_1:60343801-60343820 Msa0215280:CDS 45.0%
GGTCAGCAGTTAGATGATAG+TGG + chr2_1:60343841-60343860 Msa0215280:CDS 45.0%
AGAAATCGGGTCTCTTGTGT+GGG + chr2_1:60343864-60343883 Msa0215280:CDS 45.0%
ATAATCCACACAAGGCTTCC+GGG - chr2_1:60343909-60343928 None:intergenic 45.0%
CACCAAACACTCACGGTATT+AGG - chr2_1:60343946-60343965 None:intergenic 45.0%
CTAATACCGTGAGTGTTTGG+TGG + chr2_1:60343944-60343963 Msa0215280:intron 45.0%
! TCTGCCAATTTTTCGCCCTT+AGG - chr2_1:60344061-60344080 None:intergenic 45.0%
TAAGGGCGAAAAATTGGCAG+AGG + chr2_1:60344060-60344079 Msa0215280:CDS 45.0%
!!! CTTTTTTCTCAGTGGCACAG+AGG + chr2_1:60344366-60344385 Msa0215280:intron 45.0%
GCTATTTAACAACACTGGCC+AGG - chr2_1:60344442-60344461 None:intergenic 45.0%
TACCATAGCACTGTTGCGTA+GGG + chr2_1:60344623-60344642 Msa0215280:intron 45.0%
GGGAACGGTATTGTAAAACG+AGG - chr2_1:60344679-60344698 None:intergenic 45.0%
ATAAAAAGAGATGCACGGCC+GGG - chr2_1:60344699-60344718 None:intergenic 45.0%
CATAAAAAGAGATGCACGGC+CGG - chr2_1:60344700-60344719 None:intergenic 45.0%
GGATTCCACCAATGAATCCA+TGG + chr2_1:60344771-60344790 Msa0215280:intron 45.0%
TCATGCCATGGATTCATTGG+TGG - chr2_1:60344779-60344798 None:intergenic 45.0%
! ATCCATGGCATGAGAAGTGT+AGG + chr2_1:60344786-60344805 Msa0215280:intron 45.0%
TACCTACACTTCTCATGCCA+TGG - chr2_1:60344791-60344810 None:intergenic 45.0%
GTAGTACATCCAGCCATACA+TGG + chr2_1:60344879-60344898 Msa0215280:intron 45.0%
!! GTTGGAAAGCATCCCATGTA+TGG - chr2_1:60344895-60344914 None:intergenic 45.0%
CATACCTCACAACAGTCAGA+AGG + chr2_1:60344958-60344977 Msa0215280:CDS 45.0%
AGCATGGGCCAAAAATTCTC+GGG + chr2_1:60344990-60345009 Msa0215280:CDS 45.0%
GAACCTCCTAACATTGAGGT+TGG + chr2_1:60345013-60345032 Msa0215280:CDS 45.0%
CATGGACCAACCTCAATGTT+AGG - chr2_1:60345022-60345041 None:intergenic 45.0%
AGTGGTAGGCTTGGATACTT+TGG + chr2_1:60345153-60345172 Msa0215280:intron 45.0%
ACACGGTTGCTTGCATTTCT+TGG + chr2_1:60345340-60345359 Msa0215280:intron 45.0%
!! ATCATTGAACGGAGTGTTGG+GGG + chr2_1:60345745-60345764 Msa0215280:intron 45.0%
! AAATAAGCGTAGTGGGGATG+AGG + chr2_1:60345816-60345835 Msa0215280:intron 45.0%
AGGATGTTACGTTGGATGTG+TGG + chr2_1:60345836-60345855 Msa0215280:intron 45.0%
TTGGATGTGTGGTAAGACCT+GGG + chr2_1:60345847-60345866 Msa0215280:intron 45.0%
CTACATGCCTTCTCTCTACA+TGG - chr2_1:60345954-60345973 None:intergenic 45.0%
!! AATAAGTGGGATTGGCTGCA+TGG - chr2_1:60346096-60346115 None:intergenic 45.0%
ATGCAGCCAATCCCACTTAT+TGG + chr2_1:60346095-60346114 Msa0215280:intron 45.0%
TGCAGCCAATCCCACTTATT+GGG + chr2_1:60346096-60346115 Msa0215280:intron 45.0%
CGAGAATAGTCAACTTGTCC+AGG + chr2_1:60346681-60346700 Msa0215280:CDS 45.0%
TTCGTATGCGTGTTCCTACA+TGG + chr2_1:60346791-60346810 Msa0215280:CDS 45.0%
TCGTATGCGTGTTCCTACAT+GGG + chr2_1:60346792-60346811 Msa0215280:CDS 45.0%
TTAACCTGTGAAGCCCATGT+AGG - chr2_1:60346808-60346827 None:intergenic 45.0%
TATTCGAGAGCCTCACATTG+TGG + chr2_1:60347353-60347372 Msa0215280:intron 45.0%
!! ATTGACTCGACCACAATGTG+AGG - chr2_1:60347366-60347385 None:intergenic 45.0%
! GTGTTGTTAAACCTGGATCG+CGG - chr2_1:60347624-60347643 None:intergenic 45.0%
CTGCAATGAACCATACTTCG+TGG + chr2_1:60347849-60347868 Msa0215280:intron 45.0%
TACCGCTGCCTAGTTATGTT+AGG + chr2_1:60347946-60347965 Msa0215280:CDS 45.0%
!!! GATCTTTTTCGACTAGGTGC+TGG - chr2_1:60348114-60348133 None:intergenic 45.0%
! TCCAATACGAGTTTGCTCAG+AGG + chr2_1:60348467-60348486 Msa0215280:CDS 45.0%
ACCTCTGAGCAAACTCGTAT+TGG - chr2_1:60348471-60348490 None:intergenic 45.0%
! AATACGAGTTTGCTCAGAGG+TGG + chr2_1:60348470-60348489 Msa0215280:intron 45.0%
CCGACGTAAAATAGGACTGA+AGG - chr2_1:60348527-60348546 None:intergenic 45.0%
! TTTTTCCCTGTTGTGACAGG+AGG + chr2_1:60348569-60348588 Msa0215280:intron 45.0%
TAGCATTCAGAACGGCATCA+GGG - chr2_1:60348674-60348693 None:intergenic 45.0%
TTAGCATTCAGAACGGCATC+AGG - chr2_1:60348675-60348694 None:intergenic 45.0%
! CGTTCTGAATGCTAAACGTC+TGG + chr2_1:60348680-60348699 Msa0215280:CDS 45.0%
TCAAGAGGAGGCTTTCATGT+TGG + chr2_1:60348813-60348832 Msa0215280:CDS 45.0%
CAAGAGGAGGCTTTCATGTT+GGG + chr2_1:60348814-60348833 Msa0215280:CDS 45.0%
TGCGCATGCATTAGCTGAAA+CGG + chr2_1:60348963-60348982 Msa0215280:intron 45.0%
ATGTAGCCAACTCCACTTAG+TGG + chr2_1:60349268-60349287 Msa0215280:intron 45.0%
CAGACACAGAGAGACAGAAA+CGG - chr2_1:60349672-60349691 None:intergenic 45.0%
!!! GGGCTCATTTTGGTTGTGAT+AGG + chr2_1:60349807-60349826 Msa0215280:CDS 45.0%
AGGACTACGCGAAAACTGAT+GGG + chr2_1:60350250-60350269 Msa0215280:intron 45.0%
TAGCCATGTACATAGGCTCT+AGG - chr2_1:60350375-60350394 None:intergenic 45.0%
TTCCGGAACTTTCTTCGTCC+GGG + chr2_1:60343519-60343538 Msa0215280:CDS 50.0%
GCTAAATGTGCTCGGCTACA+TGG - chr2_1:60343637-60343656 None:intergenic 50.0%
TGTAGCCGAGCACATTTAGC+GGG + chr2_1:60343637-60343656 Msa0215280:intron 50.0%
GAGAAATCGGGTCTCTTGTG+TGG + chr2_1:60343863-60343882 Msa0215280:CDS 50.0%
!! CGATTTTGACCTGTCTACCC+CGG + chr2_1:60343888-60343907 Msa0215280:CDS 50.0%
TAATCCACACAAGGCTTCCG+GGG - chr2_1:60343908-60343927 None:intergenic 50.0%
!! GGCAGAGGCACTACATTCTA+AGG + chr2_1:60344075-60344094 Msa0215280:CDS 50.0%
GTACCATAGCACTGTTGCGT+AGG + chr2_1:60344622-60344641 Msa0215280:intron 50.0%
ACCATAGCACTGTTGCGTAG+GGG + chr2_1:60344624-60344643 Msa0215280:intron 50.0%
!! GAAAGCATCCCATGTATGGC+TGG - chr2_1:60344891-60344910 None:intergenic 50.0%
GCATGGGCCAAAAATTCTCG+GGG + chr2_1:60344991-60345010 Msa0215280:CDS 50.0%
! GGAGGTTCCCCGAGAATTTT+TGG - chr2_1:60345001-60345020 None:intergenic 50.0%
GGACCAACCTCAATGTTAGG+AGG - chr2_1:60345019-60345038 None:intergenic 50.0%
TCCATGTGAAGCAGACACGA+AGG + chr2_1:60345036-60345055 Msa0215280:CDS 50.0%
TCCTTCGTGTCTGCTTCACA+TGG - chr2_1:60345040-60345059 None:intergenic 50.0%
TGAAGCAGACACGAAGGAAG+AGG + chr2_1:60345042-60345061 Msa0215280:CDS 50.0%
TTGTGGATTTCCCTGCACAG+TGG + chr2_1:60345135-60345154 Msa0215280:CDS 50.0%
!! TCATTGAACGGAGTGTTGGG+GGG + chr2_1:60345746-60345765 Msa0215280:intron 50.0%
TGGGGATGAGGATGTTACGT+TGG + chr2_1:60345828-60345847 Msa0215280:intron 50.0%
GTTGGATGTGTGGTAAGACC+TGG + chr2_1:60345846-60345865 Msa0215280:intron 50.0%
!! GATGGTGGATAGGCTTAGGT+TGG + chr2_1:60345928-60345947 Msa0215280:intron 50.0%
! AGGTTGGCCATGTAGAGAGA+AGG + chr2_1:60345944-60345963 Msa0215280:intron 50.0%
! AATGTTGCTGCTTGGAGAGG+AGG - chr2_1:60346432-60346451 None:intergenic 50.0%
! GAGAATGTTGCTGCTTGGAG+AGG - chr2_1:60346435-60346454 None:intergenic 50.0%
TGCGTGAGAATGTTGCTGCT+TGG - chr2_1:60346440-60346459 None:intergenic 50.0%
CGTGGATATATCACAGCGCA+TGG - chr2_1:60346472-60346491 None:intergenic 50.0%
GAAACAAGCGTCTGCACTAC+CGG - chr2_1:60346526-60346545 None:intergenic 50.0%
GTTCATGGCTAGGAATTGCC+TGG - chr2_1:60346702-60346721 None:intergenic 50.0%
GATCTTCGAGGCTCGTATGA+AGG - chr2_1:60346736-60346755 None:intergenic 50.0%
GCTACTGAAGCTGATCTTCG+AGG - chr2_1:60346748-60346767 None:intergenic 50.0%
AGATCAGCTTCAGTAGCCTG+TGG + chr2_1:60346751-60346770 Msa0215280:CDS 50.0%
TGTTCCTACATGGGCTTCAC+AGG + chr2_1:60346801-60346820 Msa0215280:CDS 50.0%
GCTGTAGTGCTATAGCACAG+AGG + chr2_1:60347482-60347501 Msa0215280:intron 50.0%
AACCTGGATCGCGGAAATAG+CGG - chr2_1:60347615-60347634 None:intergenic 50.0%
AGGCAGCGGTATGACACATT+CGG - chr2_1:60347937-60347956 None:intergenic 50.0%
CGCCTAACATAACTAGGCAG+CGG - chr2_1:60347951-60347970 None:intergenic 50.0%
! GAGGCATCAACCAACTAGGA+TGG - chr2_1:60348092-60348111 None:intergenic 50.0%
!!! CTTTTTCGACTAGGTGCTGG+AGG - chr2_1:60348111-60348130 None:intergenic 50.0%
! GCTTTTGGCGATGAGACTGA+GGG - chr2_1:60348245-60348264 None:intergenic 50.0%
! AGCTTTTGGCGATGAGACTG+AGG - chr2_1:60348246-60348265 None:intergenic 50.0%
GAAGTCCTCCTGTCACAACA+GGG - chr2_1:60348577-60348596 None:intergenic 50.0%
CATACTCGCCTCATTCCACA+AGG + chr2_1:60348633-60348652 Msa0215280:CDS 50.0%
GGAGGCTTTCATGTTGGGAA+TGG + chr2_1:60348819-60348838 Msa0215280:CDS 50.0%
ACGACACCACTAAGTGGAGT+TGG - chr2_1:60349277-60349296 None:intergenic 50.0%
TGGGTGAACTGTGGTATGTG+TGG + chr2_1:60349779-60349798 Msa0215280:CDS 50.0%
ACTGTGGTATGTGTGGTGAG+TGG + chr2_1:60349786-60349805 Msa0215280:CDS 50.0%
CTGTGGTATGTGTGGTGAGT+GGG + chr2_1:60349787-60349806 Msa0215280:CDS 50.0%
!! TGTGGTGAGTGGGCTCATTT+TGG + chr2_1:60349797-60349816 Msa0215280:CDS 50.0%
TTTGGTTGTGATAGGCGGCA+AGG + chr2_1:60349815-60349834 Msa0215280:CDS 50.0%
! GCAAGGACTCGGAGCATTTA+AGG + chr2_1:60349832-60349851 Msa0215280:CDS 50.0%
CAGGACTACGCGAAAACTGA+TGG + chr2_1:60350249-60350268 Msa0215280:intron 50.0%
AGCCATTACCTCAAGTCGCC+CGG - chr2_1:60343540-60343559 None:intergenic 55.0%
GGGACCGGTAATGCATAGCA+AGG - chr2_1:60343611-60343630 None:intergenic 55.0%
TGTGCTCGGCTACATGGCTT+GGG - chr2_1:60343631-60343650 None:intergenic 55.0%
ATGTGCTCGGCTACATGGCT+TGG - chr2_1:60343632-60343651 None:intergenic 55.0%
!!! ACGGAGGTGTTTTGTGTGGC+AGG + chr2_1:60344277-60344296 Msa0215280:intron 55.0%
!!! CGGAGGTGTTTTGTGTGGCA+GGG + chr2_1:60344278-60344297 Msa0215280:intron 55.0%
TCCCCTACGCAACAGTGCTA+TGG - chr2_1:60344628-60344647 None:intergenic 55.0%
CTGCCCTTCTGACTGTTGTG+AGG - chr2_1:60344965-60344984 None:intergenic 55.0%
CACAACAGTCAGAAGGGCAG+CGG + chr2_1:60344965-60344984 Msa0215280:CDS 55.0%
AGAAGGGCAGCGGTAAGCAT+GGG + chr2_1:60344975-60344994 Msa0215280:CDS 55.0%
CGGGGAACCTCCTAACATTG+AGG + chr2_1:60345009-60345028 Msa0215280:CDS 55.0%
GGATTTCCCTGCACAGTGGT+AGG + chr2_1:60345139-60345158 Msa0215280:intron 55.0%
TCCAAGCCTACCACTGTGCA+GGG - chr2_1:60345148-60345167 None:intergenic 55.0%
ATCCAAGCCTACCACTGTGC+AGG - chr2_1:60345149-60345168 None:intergenic 55.0%
!! CATTGAACGGAGTGTTGGGG+GGG + chr2_1:60345747-60345766 Msa0215280:intron 55.0%
!! ATTGAACGGAGTGTTGGGGG+GGG + chr2_1:60345748-60345767 Msa0215280:intron 55.0%
ATGTGTGGTAAGACCTGGGC+AGG + chr2_1:60345851-60345870 Msa0215280:intron 55.0%
TGGTAAGACCTGGGCAGGAT+AGG + chr2_1:60345856-60345875 Msa0215280:intron 55.0%
AGCAACATTCTCACGCAGCG+TGG + chr2_1:60346443-60346462 Msa0215280:CDS 55.0%
! AACCGCTATTTCCGCGATCC+AGG + chr2_1:60347610-60347629 Msa0215280:intron 55.0%
!! GCTGGAGGCATCAACCAACT+AGG - chr2_1:60348096-60348115 None:intergenic 55.0%
TGGCGATGAGACTGAGGGAT+TGG - chr2_1:60348240-60348259 None:intergenic 55.0%
GGAAGTCCTCCTGTCACAAC+AGG - chr2_1:60348578-60348597 None:intergenic 55.0%
GTGACAGGAGGACTTCCTGA+AGG + chr2_1:60348581-60348600 Msa0215280:intron 55.0%
ACTCGCCTCATTCCACAAGG+TGG + chr2_1:60348636-60348655 Msa0215280:CDS 55.0%
CAAGGCCACCTTGTGGAATG+AGG - chr2_1:60348644-60348663 None:intergenic 55.0%
AACTCAGCAAGGCCACCTTG+TGG - chr2_1:60348651-60348670 None:intergenic 55.0%
TCTAGGTAGAGGGGAATGCC+TGG - chr2_1:60349031-60349050 None:intergenic 55.0%
GTCAACAACAGTAGCGCAGC+AGG + chr2_1:60349752-60349771 Msa0215280:intron 55.0%
TGTGATAGGCGGCAAGGACT+CGG + chr2_1:60349821-60349840 Msa0215280:CDS 55.0%
! CTACGCGAAAACTGATGGGC+TGG + chr2_1:60350254-60350273 Msa0215280:CDS 55.0%
CGCCCGGACGAAGAAAGTTC+CGG - chr2_1:60343524-60343543 None:intergenic 60.0%
TTCTTCGTCCGGGCGACTTG+AGG + chr2_1:60343529-60343548 Msa0215280:CDS 60.0%
GTCCGGGCGACTTGAGGTAA+TGG + chr2_1:60343535-60343554 Msa0215280:intron 60.0%
! TCGGCTACATGGCTTGGGAC+CGG - chr2_1:60343626-60343645 None:intergenic 60.0%
ACAAGGCTTCCGGGGTAGAC+AGG - chr2_1:60343900-60343919 None:intergenic 60.0%
! TCTACCCCGGAAGCCTTGTG+TGG + chr2_1:60343901-60343920 Msa0215280:CDS 60.0%
AAGAGATGCACGGCCGGGAA+CGG - chr2_1:60344694-60344713 None:intergenic 60.0%
CAGAAGGGCAGCGGTAAGCA+TGG + chr2_1:60344974-60344993 Msa0215280:CDS 60.0%
TCCCTGCACAGTGGTAGGCT+TGG + chr2_1:60345144-60345163 Msa0215280:intron 60.0%
!! TTGAACGGAGTGTTGGGGGG+GGG + chr2_1:60345749-60345768 Msa0215280:intron 60.0%
! GTTGCTGCTTGGAGAGGAGG+TGG - chr2_1:60346429-60346448 None:intergenic 60.0%
CGGCATCAGGGAACTCAGCA+AGG - chr2_1:60348662-60348681 None:intergenic 60.0%
ACAGTAGCGCAGCAGGTGAC+TGG + chr2_1:60349759-60349778 Msa0215280:intron 60.0%
CAGTAGCGCAGCAGGTGACT+GGG + chr2_1:60349760-60349779 Msa0215280:intron 60.0%
GCAGGTGACTGGGTGAACTG+TGG + chr2_1:60349770-60349789 Msa0215280:CDS 60.0%
!! TGAACGGAGTGTTGGGGGGG+GGG + chr2_1:60345750-60345769 Msa0215280:intron 65.0%
GCTGCTTGGAGAGGAGGTGG+TGG - chr2_1:60346426-60346445 None:intergenic 65.0%
!! GAACGGAGTGTTGGGGGGGG+GGG + chr2_1:60345751-60345770 Msa0215280:intron 70.0%
!! AACGGAGTGTTGGGGGGGGG+GGG + chr2_1:60345752-60345771 Msa0215280:intron 70.0%
!! ACGGAGTGTTGGGGGGGGGG+GGG + chr2_1:60345753-60345772 Msa0215280:intron 75.0%
!!! CGGAGTGTTGGGGGGGGGGG+GGG + chr2_1:60345754-60345773 Msa0215280:intron 80.0%
!!! GGAGTGTTGGGGGGGGGGGG+GGG + chr2_1:60345755-60345774 Msa0215280:intron 80.0%
!!! GAGTGTTGGGGGGGGGGGGG+GGG + chr2_1:60345756-60345775 Msa0215280:intron 80.0%
!! AGTGTTGGGGGGGGGGGGGG+GGG + chr2_1:60345757-60345776 Msa0215280:intron 80.0%
! GTGTTGGGGGGGGGGGGGGG+GGG + chr2_1:60345758-60345777 Msa0215280:intron 85.0%
! TGTTGGGGGGGGGGGGGGGG+GGG + chr2_1:60345759-60345778 Msa0215280:intron 85.0%
! GTTGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345760-60345779 Msa0215280:intron 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345761-60345780 Msa0215280:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr2_1:60345762-60345781 Msa0215280:intron 95.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 60342743 60350686 60342743 ID=Msa0215280;Name=Msa0215280
chr2_1 mRNA 60342743 60350686 60342743 ID=Msa0215280-mRNA-1;Parent=Msa0215280;Name=Msa0215280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=637|0.85|0.86|1|0.92|0.93|15|339|748
chr2_1 exon 60342743 60343550 60342743 ID=Msa0215280-mRNA-1:exon:16566;Parent=Msa0215280-mRNA-1
chr2_1 exon 60343760 60343951 60343760 ID=Msa0215280-mRNA-1:exon:16567;Parent=Msa0215280-mRNA-1
chr2_1 exon 60344043 60344096 60344043 ID=Msa0215280-mRNA-1:exon:16568;Parent=Msa0215280-mRNA-1
chr2_1 exon 60344299 60344339 60344299 ID=Msa0215280-mRNA-1:exon:16569;Parent=Msa0215280-mRNA-1
chr2_1 exon 60344883 60345156 60344883 ID=Msa0215280-mRNA-1:exon:16570;Parent=Msa0215280-mRNA-1
chr2_1 exon 60345270 60345326 60345270 ID=Msa0215280-mRNA-1:exon:16571;Parent=Msa0215280-mRNA-1
chr2_1 exon 60346252 60346283 60346252 ID=Msa0215280-mRNA-1:exon:16572;Parent=Msa0215280-mRNA-1
chr2_1 exon 60346419 60346572 60346419 ID=Msa0215280-mRNA-1:exon:16573;Parent=Msa0215280-mRNA-1
chr2_1 exon 60346649 60346822 60346649 ID=Msa0215280-mRNA-1:exon:16574;Parent=Msa0215280-mRNA-1
chr2_1 exon 60347916 60348488 60347916 ID=Msa0215280-mRNA-1:exon:16575;Parent=Msa0215280-mRNA-1
chr2_1 exon 60348588 60348725 60348588 ID=Msa0215280-mRNA-1:exon:16576;Parent=Msa0215280-mRNA-1
chr2_1 exon 60348807 60348905 60348807 ID=Msa0215280-mRNA-1:exon:16577;Parent=Msa0215280-mRNA-1
chr2_1 exon 60349564 60349664 60349564 ID=Msa0215280-mRNA-1:exon:16578;Parent=Msa0215280-mRNA-1
chr2_1 exon 60349763 60349853 60349763 ID=Msa0215280-mRNA-1:exon:16579;Parent=Msa0215280-mRNA-1
chr2_1 exon 60350252 60350686 60350252 ID=Msa0215280-mRNA-1:exon:16580;Parent=Msa0215280-mRNA-1
chr2_1 five_prime_UTR 60342743 60343379 60342743 ID=Msa0215280-mRNA-1:five_prime_utr;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60343380 60343550 60343380 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60343760 60343951 60343760 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60344043 60344096 60344043 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60344299 60344339 60344299 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60344883 60345156 60344883 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60345270 60345326 60345270 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60346252 60346283 60346252 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60346419 60346572 60346419 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60346649 60346822 60346649 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60347916 60348488 60347916 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60348588 60348725 60348588 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60348807 60348905 60348807 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60349564 60349664 60349564 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60349763 60349853 60349763 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 CDS 60350252 60350347 60350252 ID=Msa0215280-mRNA-1:cds;Parent=Msa0215280-mRNA-1
chr2_1 three_prime_UTR 60350348 60350686 60350348 ID=Msa0215280-mRNA-1:three_prime_utr;Parent=Msa0215280-mRNA-1
Gene Sequence

>Msa0215280

ATGATGTTCCATTTTCAGGGTGTGTCAAGACATTGTAGTCTTCTTGCTGTTCTTAGTGGTAAATCACATGATAGTAAACAAAAGCAGAAGCAGAAACAGGATGATGATGCTTCTGAGGATCAATTTTCGTCGTACCCGTTTCCGGAACTTTCTTCGTCCGGGCGACTTGAGGTTAAAGTGTTGACTAAACCTACTTTCGATGAACTTGCTCGAGTTCTAGAACAACTGCAGCCGGATTTTGTTTACTTGCAAGGTCAGCAGTTAGATGATAGTGGAGAAATCGGGTCTCTTGTGTGGGACGATTTTGACCTGTCTACCCCGGAAGCCTTGTGTGGATTATTTTCTTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTAAGGGCGAAAAATTGGCAGAGGCACTACATTCTAAGGGAGTACCTTACACTATTTACTGGAAAAATGAATTTTCAAATACATCCAGCCATACATGGGATGCTTTCCAACTTGCTCAGTCATCTTTTAGACTATACTGTGTGCAAAACGAGGTCATACCTCACAACAGTCAGAAGGGCAGCGGTAAGCATGGGCCAAAAATTCTCGGGGAACCTCCTAACATTGAGGTTGGTCCATGTGAAGCAGACACGAAGGAAGAGGAAGAAGATTCACCTGAGACTAGTTCATCTATAAAGATATATGATGATGATGTGAATACGAGATTTCTTCTTTGTGGATTTCCCTGCACAGTGGATGCGTGCTTATTGGAGTCATTAGAGGATGGACTCAATGCTCTCCTATGTACTGAAATACGGGGATGTAAACTTCAAAATCGGACAAGTGCTCCACCACCTCCTCTCCAAGCAGCAACATTCTCACGCAGCGTGGTGACCATGCGCTGTGATATATCCACGTCTAGTTCTGCTCATATATCACTTTTGGTGTCCGGTAGTGCAGACGCTTGTTTCAATGATCAGGCACGGGTGAATTGTATTCTTTTGGAGAATCATATTAAGAAAGAGCTCACCGAGAATAGTCAACTTGTCCAGGCAATTCCTAGCCATGAACAAAATAAACTACCTTCATACGAGCCTCGAAGATCAGCTTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTCGTATGCGTGTTCCTACATGGGCTTCACAGGTTCTTAGACAACTTGCACCGAATGTGTCATACCGCTGCCTAGTTATGTTAGGCGTTGCTAGTATTCAAGGATTATCAGTTGCATCTTTTACTAAAGATGATGCAGAACGTCTTCTTTTCTTTTGTAATCGGCAGGAGAAAGATAACTGCTCCAAAGATATTGTTTTCTCTAGCCATCCTAGTTGGTTGATGCCTCCAGCACCTAGTCGAAAAAGATCTGAACCAGAATCATGCTCTAGAGTTAAATCTATCAATGCTAGTGGCGTGAAAGTTGAAGATAATGGCAGTGATAGGCAGAAATTAAGTTTTGCTGCAATGAGGCCAATCCCTCAGTCTCATCGCCAAAAGCTTCTACCTTTTTCGGGATATTTTGAGGGAGAAAAATATGATGGAGACCGTGGAAAATCAAATCAGCCTCTTGTTCCAATTAAGCACAATGGTTTAGGTTCTCGTTCAGTTACAAACAGAAAATCTGTGTCAAACTCGTTTCAAGCTCACCAGATAATATCTTTGAATCCACTACCAATGAAAAAACATGGCTGCGACAGAGCTCCAATACGAGTTTGCTCAGAGGAGGACTTCCTGAAGGATGTAATGCAATTTCTGGTTCTTCGAGGGCATACTCGCCTCATTCCACAAGGTGGCCTTGCTGAGTTCCCTGATGCCGTTCTGAATGCTAAACGTCTGGATCTTTTTAACTTGTATAGAGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGGAATGGTATCAATTGGAAAGGACAAGTTTTCTCAAAGATGAGCAATCACACTCTGACACATAGAATGACAGGTGTTGGCAATACACTCAAAAGACATTACGAAACTTATCTTTTAGAATATGAATTAGCTCATGATGATGTAGATGGCGAATGCTGCTTATTGTGTCACAGTAGCGCAGCAGGTGACTGGGTGAACTGTGGTATGTGTGGTGAGTGGGCTCATTTTGGTTGTGATAGGCGGCAAGGACTCGGAGCATTTAAGGACTACGCGAAAACTGATGGGCTGGAGTACGTTTGTCCACACTGCAGCATGTCAAATTTTAGTAAAAAATCGCAGAAAACTGCAAATGGTTATTAA
Protein sequence

>Msa0215280

MMFHFQGVSRHCSLLAVLSGKSHDSKQKQKQKQDDDASEDQFSSYPFPELSSSGRLEVKVLTKPTFDELARVLEQLQPDFVYLQGQQLDDSGEIGSLVWDDFDLSTPEALCGLFSSKLPNTVYLETPKGEKLAEALHSKGVPYTIYWKNEFSNTSSHTWDAFQLAQSSFRLYCVQNEVIPHNSQKGSGKHGPKILGEPPNIEVGPCEADTKEEEEDSPETSSSIKIYDDDVNTRFLLCGFPCTVDACLLESLEDGLNALLCTEIRGCKLQNRTSAPPPPLQAATFSRSVVTMRCDISTSSSAHISLLVSGSADACFNDQARVNCILLENHIKKELTENSQLVQAIPSHEQNKLPSYEPRRSASVACGSSVFEVRMRVPTWASQVLRQLAPNVSYRCLVMLGVASIQGLSVASFTKDDAERLLFFCNRQEKDNCSKDIVFSSHPSWLMPPAPSRKRSEPESCSRVKSINASGVKVEDNGSDRQKLSFAAMRPIPQSHRQKLLPFSGYFEGEKYDGDRGKSNQPLVPIKHNGLGSRSVTNRKSVSNSFQAHQIISLNPLPMKKHGCDRAPIRVCSEEDFLKDVMQFLVLRGHTRLIPQGGLAEFPDAVLNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMSNHTLTHRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGMCGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSMSNFSKKSQKTANGY*