Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0215690 | KEH26464.1 | 46.364 | 440 | 137 | 9 | 1 | 343 | 33 | 470 | 1.00e-104 | 331 |
| Msa0215690 | KEH26464.1 | 67.871 | 249 | 71 | 3 | 252 | 493 | 224 | 470 | 9.92e-107 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0215690 | A0A072U9K2 | 46.364 | 440 | 137 | 9 | 1 | 343 | 33 | 470 | 4.80e-105 | 331 |
| Msa0215690 | A0A072U9K2 | 67.871 | 249 | 71 | 3 | 252 | 493 | 224 | 470 | 4.74e-107 | 336 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0215690 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0215690 | MtrunA17_Chr6g0476171 | 57.028 | 249 | 60 | 4 | 252 | 493 | 37 | 245 | 1.55e-85 | 263 |
| Msa0215690 | MtrunA17_Chr6g0476171 | 42.279 | 272 | 95 | 7 | 106 | 343 | 2 | 245 | 3.98e-54 | 182 |
| Msa0215690 | MtrunA17_Chr6g0476181 | 55.921 | 152 | 20 | 1 | 1 | 105 | 1 | 152 | 9.50e-46 | 157 |
| Msa0215690 | MtrunA17_Chr1g0162161 | 57.143 | 140 | 25 | 1 | 1 | 105 | 3 | 142 | 5.13e-45 | 155 |
| Msa0215690 | MtrunA17_Chr1g0163131 | 35.507 | 276 | 111 | 6 | 1 | 211 | 33 | 306 | 6.99e-44 | 157 |
| Msa0215690 | MtrunA17_Chr1g0163131 | 45.455 | 88 | 46 | 1 | 406 | 493 | 221 | 306 | 4.32e-16 | 79.0 |
| Msa0215690 | MtrunA17_Chr1g0163101 | 55.797 | 138 | 28 | 2 | 1 | 105 | 32 | 169 | 6.67e-41 | 145 |
| Msa0215690 | MtrunA17_Chr1g0163141 | 90.000 | 70 | 7 | 0 | 1 | 70 | 10 | 79 | 6.08e-40 | 142 |
| Msa0215690 | MtrunA17_Chr1g0163181 | 27.400 | 427 | 207 | 13 | 2 | 343 | 21 | 429 | 2.57e-39 | 147 |
| Msa0215690 | MtrunA17_Chr1g0163181 | 33.457 | 269 | 151 | 11 | 233 | 493 | 181 | 429 | 1.49e-31 | 126 |
| Msa0215690 | MtrunA17_Chr1g0163261 | 35.612 | 278 | 117 | 9 | 2 | 224 | 25 | 295 | 5.03e-36 | 135 |
| Msa0215690 | MtrunA17_Chr1g0163261 | 44.086 | 93 | 42 | 4 | 270 | 355 | 205 | 294 | 1.86e-13 | 71.2 |
| Msa0215690 | MtrunA17_Chr1g0163201 | 26.585 | 410 | 195 | 12 | 2 | 342 | 19 | 391 | 1.98e-35 | 136 |
| Msa0215690 | MtrunA17_Chr1g0163201 | 35.931 | 231 | 96 | 8 | 270 | 493 | 207 | 392 | 3.06e-30 | 122 |
| Msa0215690 | MtrunA17_Chr1g0163111 | 35.600 | 250 | 117 | 10 | 252 | 493 | 15 | 228 | 2.27e-35 | 131 |
| Msa0215690 | MtrunA17_Chr1g0163111 | 27.711 | 249 | 126 | 9 | 130 | 346 | 5 | 231 | 2.02e-18 | 84.3 |
| Msa0215690 | MtrunA17_Chr1g0163121 | 74.667 | 75 | 19 | 0 | 1 | 75 | 10 | 84 | 1.77e-34 | 126 |
| Msa0215690 | MtrunA17_Chr1g0163081 | 52.239 | 134 | 32 | 2 | 1 | 103 | 5 | 137 | 2.36e-34 | 126 |
| Msa0215690 | MtrunA17_Chr1g0163231 | 34.831 | 267 | 102 | 8 | 2 | 210 | 25 | 277 | 5.45e-33 | 127 |
| Msa0215690 | MtrunA17_Chr1g0163231 | 42.105 | 95 | 35 | 2 | 262 | 342 | 189 | 277 | 9.25e-12 | 65.9 |
| Msa0215690 | MtrunA17_Chr1g0163251 | 32.131 | 305 | 155 | 8 | 2 | 256 | 21 | 323 | 8.34e-33 | 129 |
| Msa0215690 | MtrunA17_Chr1g0163251 | 40.000 | 120 | 62 | 4 | 243 | 355 | 175 | 291 | 1.58e-14 | 75.5 |
| Msa0215690 | MtrunA17_Chr1g0163151 | 33.473 | 239 | 107 | 7 | 262 | 493 | 28 | 221 | 9.42e-32 | 121 |
| Msa0215690 | MtrunA17_Chr1g0163161 | 50.000 | 128 | 27 | 2 | 14 | 105 | 1 | 127 | 1.21e-29 | 112 |
| Msa0215690 | MtrunA17_Chr1g0171611 | 32.932 | 249 | 119 | 8 | 2 | 210 | 25 | 265 | 4.31e-29 | 116 |
| Msa0215690 | MtrunA17_Chr1g0171611 | 43.333 | 90 | 41 | 2 | 262 | 342 | 177 | 265 | 3.89e-12 | 67.0 |
| Msa0215690 | MtrunA17_Chr1g0162151 | 30.204 | 245 | 88 | 9 | 261 | 492 | 32 | 206 | 3.10e-20 | 89.4 |
| Msa0215690 | MtrunA17_Chr1g0162151 | 46.667 | 75 | 39 | 1 | 149 | 223 | 57 | 130 | 6.78e-14 | 70.9 |
| Msa0215690 | MtrunA17_Chr1g0163091 | 47.525 | 101 | 43 | 4 | 262 | 355 | 33 | 130 | 2.78e-19 | 85.1 |
| Msa0215690 | MtrunA17_Chr1g0163091 | 36.296 | 135 | 56 | 3 | 114 | 223 | 1 | 130 | 1.73e-15 | 74.3 |
| Msa0215690 | MtrunA17_Chr7g0233531 | 27.341 | 267 | 139 | 8 | 1 | 214 | 1 | 265 | 4.71e-18 | 84.3 |
| Msa0215690 | MtrunA17_Chr1g0163241 | 45.238 | 84 | 44 | 2 | 2 | 83 | 23 | 106 | 2.11e-16 | 77.0 |
| Msa0215690 | MtrunA17_Chr7g0233541 | 26.502 | 283 | 138 | 10 | 1 | 214 | 1 | 282 | 3.36e-16 | 79.3 |
| Msa0215690 | MtrunA17_Chr5g0419211 | 37.755 | 98 | 48 | 3 | 267 | 355 | 8 | 101 | 1.22e-13 | 67.4 |
| Msa0215690 | MtrunA17_Chr1g0163191 | 40.476 | 84 | 48 | 2 | 2 | 83 | 21 | 104 | 6.10e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 90 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATATGCGGGCAATTT+TGG | 0.164513 | 2_1:-61090474 | Msa0215690:CDS |
| TAGCTTCACTCTCATATTAT+TGG | 0.182224 | 2_1:-61092639 | Msa0215690:CDS |
| TTTGGAAGTTTAAGAGATAT+TGG | 0.253059 | 2_1:+61094667 | None:intergenic |
| ATGGTATTTGGCTTCAAAAT+TGG | 0.298035 | 2_1:-61094606 | Msa0215690:CDS |
| CTATCACCTTCAACGTGATA+TGG | 0.333665 | 2_1:+61093829 | None:intergenic |
| AGTTTAAGAGATATTGGATT+TGG | 0.342240 | 2_1:+61094673 | None:intergenic |
| CTCTGGACATGATTCCTTTG+TGG | 0.350591 | 2_1:+61093164 | None:intergenic |
| TGCAACGCAGTGATGGTATT+TGG | 0.352991 | 2_1:-61094618 | Msa0215690:CDS |
| AAGAAGCATGGTATATTTAG+TGG | 0.374789 | 2_1:-61090147 | Msa0215690:CDS |
| AATCTGACCCTCCTTTGTAT+TGG | 0.385935 | 2_1:+61094539 | None:intergenic |
| TATAATGAACATCTCGACTA+TGG | 0.388378 | 2_1:-61090072 | Msa0215690:CDS |
| TTCCGAGCCTGGTTCCTTTG+TGG | 0.399802 | 2_1:+61092008 | None:intergenic |
| GACAACACCCGTAAAAGATA+TGG | 0.404989 | 2_1:-61090493 | Msa0215690:CDS |
| TTGCAAAGGCTAATGGAAAC+CGG | 0.406149 | 2_1:-61092733 | Msa0215690:CDS |
| GACATGATTCCTTTGTGGTT+GGG | 0.406491 | 2_1:+61093169 | None:intergenic |
| GGACATGATTCCTTTGTGGT+TGG | 0.429402 | 2_1:+61093168 | None:intergenic |
| TATCTCTCTACAAAATTCCT+TGG | 0.444892 | 2_1:+61094709 | None:intergenic |
| GGTCAGTGTGCAAAATGAAT+TGG | 0.447786 | 2_1:-61094642 | Msa0215690:CDS |
| TTAGAAGTGTTGGTGAGGAC+AGG | 0.455257 | 2_1:-61093350 | Msa0215690:CDS |
| AGCAATGCCATTTGAGTTGG+CGG | 0.456539 | 2_1:+61094330 | None:intergenic |
| ATATCTCTTAAACTTCCAAA+TGG | 0.460593 | 2_1:-61094664 | Msa0215690:CDS |
| TGCTTCTTCAACAGCTCACT+TGG | 0.461685 | 2_1:+61090162 | None:intergenic |
| AAGAGAACCGCCAACTCAAA+TGG | 0.462516 | 2_1:-61094337 | Msa0215690:CDS |
| GAATTTACATGAGATGTTCA+AGG | 0.464486 | 2_1:-61090303 | Msa0215690:CDS |
| AAGGAACATGACTTGAAAGT+TGG | 0.470859 | 2_1:-61093252 | Msa0215690:CDS |
| GACTATGGTTGGTTCACTAA+AGG | 0.474605 | 2_1:-61090057 | Msa0215690:CDS |
| TGAGAGTAGGGGAAGGAACA+TGG | 0.483751 | 2_1:-61090110 | Msa0215690:CDS |
| ATAATACCTTGAAACTGCTC+TGG | 0.488121 | 2_1:+61093147 | None:intergenic |
| TGTGAGAGATTGCAAAGTAA+AGG | 0.489991 | 2_1:-61090022 | Msa0215690:CDS |
| AGTGAAACTAGGATTCTCAT+TGG | 0.490637 | 2_1:+61093864 | None:intergenic |
| TATCTCTTAAACTTCCAAAT+GGG | 0.498661 | 2_1:-61094663 | Msa0215690:CDS |
| ATAGTAATCGTGAATGAAAG+TGG | 0.499531 | 2_1:+61092039 | None:intergenic |
| AGTGAAGCTAGGATTCTCAT+TGG | 0.504117 | 2_1:+61092652 | None:intergenic |
| AACCACAAAGGAACCAGGCT+CGG | 0.517483 | 2_1:-61092010 | Msa0215690:CDS |
| TTTGGCTTCAAAATTGGAAG+AGG | 0.520115 | 2_1:-61094600 | Msa0215690:CDS |
| TAATGGAAACACAGGAGGCA+TGG | 0.520474 | 2_1:-61093944 | Msa0215690:CDS |
| TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 2_1:-61089968 | Msa0215690:CDS |
| ATAGTAATTGTGAATGATAG+TGG | 0.521706 | 2_1:+61093195 | None:intergenic |
| TATTCTTTCGAAAACCAACT+AGG | 0.522446 | 2_1:+61092252 | None:intergenic |
| ATTCTCATTGGGATGCTCAA+TGG | 0.528590 | 2_1:+61093876 | None:intergenic |
| CCAGGCTCGGAAAAGTTTCA+AGG | 0.529291 | 2_1:-61091997 | Msa0215690:intron |
| AGTAGCAATGCCATTTGAGT+TGG | 0.533991 | 2_1:+61094327 | None:intergenic |
| GTGAAGCTAGGATTCTCATT+GGG | 0.534567 | 2_1:+61092653 | None:intergenic |
| GTGAAACTAGGATTCTCATT+GGG | 0.534567 | 2_1:+61093865 | None:intergenic |
| AGAGATTGCAAAGTAAAGGC+TGG | 0.538378 | 2_1:-61090018 | Msa0215690:CDS |
| AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 2_1:-61092207 | Msa0215690:CDS |
| AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 2_1:-61093360 | Msa0215690:CDS |
| TCATGTCCAGAGCAGTTTCA+AGG | 0.542874 | 2_1:-61093153 | Msa0215690:intron |
| AATGGAAACACAGGAGGCAT+GGG | 0.543418 | 2_1:-61093943 | Msa0215690:CDS |
| TACATGAATGAGTTATTGCA+AGG | 0.543984 | 2_1:-61092231 | Msa0215690:CDS |
| ATGAACATCTCGACTATGGT+TGG | 0.544359 | 2_1:-61090068 | Msa0215690:CDS |
| ATTCCGTGGAGTTGAGAGTA+GGG | 0.547073 | 2_1:-61090122 | Msa0215690:CDS |
| GTCAGTGTGCAAAATGAATT+GGG | 0.549331 | 2_1:-61094641 | Msa0215690:CDS |
| TGAAACAGGCGATACCTAGT+TGG | 0.550112 | 2_1:-61092266 | Msa0215690:intron |
| TGTTCTTGCAGATGATTCCA+AGG | 0.559130 | 2_1:-61094726 | None:intergenic |
| TGCAAAGGCTAATGGAAACC+GGG | 0.564594 | 2_1:-61092732 | Msa0215690:CDS |
| ATCTCAACCACAAAGGAACC+AGG | 0.564790 | 2_1:-61092015 | Msa0215690:CDS |
| TATATTTAGTGGAAATTCCG+TGG | 0.570238 | 2_1:-61090136 | Msa0215690:CDS |
| AATTAGAAGTGTTGGTGAGG+AGG | 0.570785 | 2_1:-61092199 | Msa0215690:CDS |
| ATGGTTGGTTCACTAAAGGT+TGG | 0.573713 | 2_1:-61090053 | Msa0215690:CDS |
| GTAAAAGATATGGAATATGC+GGG | 0.574921 | 2_1:-61090483 | Msa0215690:CDS |
| TTATTGGCATGTCATGTTGA+AGG | 0.578517 | 2_1:-61092623 | Msa0215690:intron |
| AATAATATGAGAGTGAAGCT+AGG | 0.582815 | 2_1:+61092641 | None:intergenic |
| GTGTTGGTGAGGACAGGGTA+TGG | 0.583705 | 2_1:-61093344 | Msa0215690:CDS |
| TAGAAGTGTTGGTGAGGACA+GGG | 0.584202 | 2_1:-61093349 | Msa0215690:CDS |
| AATTCCGTGGAGTTGAGAGT+AGG | 0.585424 | 2_1:-61090123 | Msa0215690:CDS |
| GATAATATGAGAGTGAAACT+AGG | 0.591398 | 2_1:+61093853 | None:intergenic |
| TTGTCAATGTTAGTCCGTTG+AGG | 0.593883 | 2_1:+61094292 | None:intergenic |
| AACAATTAGAAGTGTTGGTG+AGG | 0.594775 | 2_1:-61092202 | Msa0215690:CDS |
| GCAGAGGCTAATGGAAACAC+AGG | 0.596384 | 2_1:-61093952 | Msa0215690:intron |
| CGTAAAAGATATGGAATATG+CGG | 0.600766 | 2_1:-61090484 | Msa0215690:CDS |
| AACAATTAGAAGTGTTGGTG+AGG | 0.601806 | 2_1:-61093355 | Msa0215690:CDS |
| CTACTACTGTTACACCTCAA+CGG | 0.609207 | 2_1:-61094306 | Msa0215690:CDS |
| AGTGAGCTGTTGAAGAAGCA+TGG | 0.617628 | 2_1:-61090159 | Msa0215690:CDS |
| AATTGGGTGCAACGCAGTGA+TGG | 0.620819 | 2_1:-61094625 | Msa0215690:CDS |
| TACTATTATCCCAACCACAA+AGG | 0.624953 | 2_1:-61093178 | Msa0215690:CDS |
| AAACTAAAAGATCTCCGCAT+CGG | 0.625099 | 2_1:+61094563 | None:intergenic |
| TTCCCCTACTCTCAACTCCA+CGG | 0.627106 | 2_1:+61090119 | None:intergenic |
| GGAAGGAACATGGTTTGTAG+AGG | 0.629163 | 2_1:-61090100 | Msa0215690:CDS |
| CGGGAACATAACTTGCAAGT+CGG | 0.642213 | 2_1:-61092096 | Msa0215690:CDS |
| GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 2_1:-61092226 | Msa0215690:CDS |
| TTTGCAAGTTTGCTCCGATG+CGG | 0.646883 | 2_1:-61094577 | Msa0215690:CDS |
| TACTATCATCTCAACCACAA+AGG | 0.651551 | 2_1:-61092022 | Msa0215690:CDS |
| TTCCGTGGAGTTGAGAGTAG+GGG | 0.660437 | 2_1:-61090121 | Msa0215690:CDS |
| ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 2_1:-61092230 | Msa0215690:CDS |
| GTGGAGTTGAGAGTAGGGGA+AGG | 0.685462 | 2_1:-61090117 | Msa0215690:CDS |
| TCTTATAACATCATCAGACA+AGG | 0.698207 | 2_1:-61090279 | Msa0215690:intron |
| GAGGCTAATGGAAACACAGG+AGG | 0.702704 | 2_1:-61093949 | Msa0215690:CDS |
| TGGACATGTGCAGAAAACCA+AGG | 0.707757 | 2_1:-61090534 | Msa0215690:intron |
| TTGGTGAGGAGGATAGAACA+TGG | 0.724838 | 2_1:-61092188 | Msa0215690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTAATTATCACT+AGG | + | chr2_1:61091611-61091630 | None:intergenic | 10.0% |
| !! | AAAATATACATTAATAAAGT+GGG | + | chr2_1:61091804-61091823 | None:intergenic | 10.0% |
| !! | AAAAATATACATTAATAAAG+TGG | + | chr2_1:61091805-61091824 | None:intergenic | 10.0% |
| !!! | AAAACTTCAAAAATTATTTT+CGG | + | chr2_1:61091918-61091937 | None:intergenic | 10.0% |
| !! | TTATTGAATAAATTTACTTT+AGG | + | chr2_1:61092260-61092279 | None:intergenic | 10.0% |
| !!! | TAAAATATACAAATTTTTCA+AGG | - | chr2_1:61093913-61093932 | Msa0215690:CDS | 10.0% |
| !!! | CTAAGATTAATTTTTATATA+CGG | - | chr2_1:61093972-61093991 | Msa0215690:intron | 10.0% |
| !! | TAAACAGATGAATAATTAAA+AGG | + | chr2_1:61090460-61090479 | None:intergenic | 15.0% |
| !!! | CAAATGTGTAAAATATTTTA+AGG | - | chr2_1:61092812-61092831 | Msa0215690:intron | 15.0% |
| !!! | ATATTTTAAGGTTTAAATCT+TGG | - | chr2_1:61092824-61092843 | Msa0215690:intron | 15.0% |
| !! | TGCTTGTAATAAATTAATTA+AGG | + | chr2_1:61093348-61093367 | None:intergenic | 15.0% |
| !!! | CTATTTTATTTTACAGTTAT+TGG | + | chr2_1:61093730-61093749 | None:intergenic | 15.0% |
| !!! | TTAGTATTTTCAATGTCATT+AGG | + | chr2_1:61090296-61090315 | None:intergenic | 20.0% |
| !!! | AATTTGTATGGATTAAAAAG+TGG | + | chr2_1:61090547-61090566 | None:intergenic | 20.0% |
| !!! | TAAAAACTATTTTCAGCATT+TGG | + | chr2_1:61090690-61090709 | None:intergenic | 20.0% |
| !! | TATTACTGAAAAAGTAGTAT+AGG | + | chr2_1:61090881-61090900 | None:intergenic | 20.0% |
| !! | TATTAACAAGAAAGACATTT+GGG | + | chr2_1:61090982-61091001 | None:intergenic | 20.0% |
| !! | ACTAATAGAAAACATATTCA+AGG | - | chr2_1:61091020-61091039 | Msa0215690:intron | 20.0% |
| !!! | TTGATTTTCTTTTTCTTGAA+GGG | + | chr2_1:61091638-61091657 | None:intergenic | 20.0% |
| !!! | ATTGATTTTCTTTTTCTTGA+AGG | + | chr2_1:61091639-61091658 | None:intergenic | 20.0% |
| !!! | ATTTGTATGGATTAAAAAGT+GGG | + | chr2_1:61090546-61090565 | None:intergenic | 20.0% |
| !!! | AATTTGTATGGATTAAAAAG+TGG | + | chr2_1:61090547-61090566 | None:intergenic | 20.0% |
| !!! | TAATTTTTGAAGTTTTGCAA+AGG | - | chr2_1:61091922-61091941 | Msa0215690:intron | 20.0% |
| !! | TTCAATACAACTATTAACAA+AGG | + | chr2_1:61092208-61092227 | None:intergenic | 20.0% |
| !! | TACTAACAAAAACATATTCA+AGG | - | chr2_1:61092234-61092253 | Msa0215690:CDS | 20.0% |
| !!! | GAGAAAGAAGTTTATTTTAA+TGG | + | chr2_1:61093322-61093341 | None:intergenic | 20.0% |
| !!! | GATTTTAGTCATTCTAATAA+TGG | - | chr2_1:61093837-61093856 | Msa0215690:intron | 20.0% |
| !!! | TTTAAATATGTTTTTTGTCC+TGG | + | chr2_1:61094024-61094043 | None:intergenic | 20.0% |
| !! | AACAAAGAAAACATAGTTTA+AGG | + | chr2_1:61094319-61094338 | None:intergenic | 20.0% |
| !! | TTTATTCATATATATGCAGT+TGG | - | chr2_1:61094476-61094495 | Msa0215690:intron | 20.0% |
| ! | AGTTTAAGAGATATTGGATT+TGG | + | chr2_1:61089999-61090018 | None:intergenic | 25.0% |
| ! | TTTGGAAGTTTAAGAGATAT+TGG | + | chr2_1:61090005-61090024 | None:intergenic | 25.0% |
| ! | ATATCTCTTAAACTTCCAAA+TGG | - | chr2_1:61090005-61090024 | Msa0215690:CDS | 25.0% |
| ! | TATCTCTTAAACTTCCAAAT+GGG | - | chr2_1:61090006-61090025 | Msa0215690:CDS | 25.0% |
| !!! | CTTTTAGTTTTCCAATACAA+AGG | - | chr2_1:61090119-61090138 | Msa0215690:CDS | 25.0% |
| !! | CAAAATTTGAGATGAACTAA+GGG | + | chr2_1:61090508-61090527 | None:intergenic | 25.0% |
| !! | ATGTACTTTGGTAATTTGTA+TGG | + | chr2_1:61090559-61090578 | None:intergenic | 25.0% |
| ! | AGAACTAAAAACATGTACTT+TGG | + | chr2_1:61090571-61090590 | None:intergenic | 25.0% |
| !!! | TAGTTTTTAAAGTTTTGCAG+AGG | - | chr2_1:61090701-61090720 | Msa0215690:intron | 25.0% |
| ! | ATTAACAAGAAAGACATTTG+GGG | + | chr2_1:61090981-61091000 | None:intergenic | 25.0% |
| ! | CTATTAACAAGAAAGACATT+TGG | + | chr2_1:61090983-61091002 | None:intergenic | 25.0% |
| ! | ATATGAATGAGTTATTGCAA+GGG | - | chr2_1:61091286-61091305 | Msa0215690:intron | 25.0% |
| ! | ATAGTAATTGTGAATGATAG+TGG | + | chr2_1:61091477-61091496 | None:intergenic | 25.0% |
| !! | TGATTTTCTTTTTCTTGAAG+GGG | + | chr2_1:61091637-61091656 | None:intergenic | 25.0% |
| !!! | ATAAAGACATTGATTTAGCT+GGG | + | chr2_1:61091699-61091718 | None:intergenic | 25.0% |
| !!! | AATAAAGACATTGATTTAGC+TGG | + | chr2_1:61091700-61091719 | None:intergenic | 25.0% |
| ! | CACTATTACTGAGAAAAAAA+AGG | + | chr2_1:61092099-61092118 | None:intergenic | 25.0% |
| ! | AAACAAAAGAGAAAACGTAT+AGG | - | chr2_1:61092286-61092305 | Msa0215690:intron | 25.0% |
| !! | ATCCAGAATAAATTTTCGAA+TGG | - | chr2_1:61092527-61092546 | Msa0215690:intron | 25.0% |
| !! | TCCAGAATAAATTTTCGAAT+GGG | - | chr2_1:61092528-61092547 | Msa0215690:intron | 25.0% |
| !! | TTTGATTGATTGTAGTTTGT+TGG | + | chr2_1:61092796-61092815 | None:intergenic | 25.0% |
| ! | ATGTTAATGTTACTGTCATT+AGG | - | chr2_1:61092942-61092961 | Msa0215690:intron | 25.0% |
| ! | TGTTAATGTTACTGTCATTA+GGG | - | chr2_1:61092943-61092962 | Msa0215690:intron | 25.0% |
| ! | CATAACAAATACTTGTTCAA+CGG | - | chr2_1:61093006-61093025 | Msa0215690:intron | 25.0% |
| ! | ACAAAAACAACAGTAATAAG+TGG | + | chr2_1:61093139-61093158 | None:intergenic | 25.0% |
| !!! | ATTGTCATGTTTACCTTTTT+TGG | - | chr2_1:61093276-61093295 | Msa0215690:CDS | 25.0% |
| ! | AATAGAAAAAATGACTGATG+TGG | - | chr2_1:61093745-61093764 | Msa0215690:intron | 25.0% |
| ! | TTAAACACACTATCATCTAT+TGG | + | chr2_1:61093772-61093791 | None:intergenic | 25.0% |
| !! | AATAGATGATAGTGTGTTTA+AGG | - | chr2_1:61093771-61093790 | Msa0215690:intron | 25.0% |
| !! | ATAGATGATAGTGTGTTTAA+GGG | - | chr2_1:61093772-61093791 | Msa0215690:intron | 25.0% |
| !!! | TACAAAAACACATGGTTTTA+GGG | - | chr2_1:61094239-61094258 | Msa0215690:intron | 25.0% |
| TATCTCTCTACAAAATTCCT+TGG | + | chr2_1:61089963-61089982 | None:intergenic | 30.0% | |
| ! | GGAATTTTGTAGAGAGATAT+TGG | - | chr2_1:61089964-61089983 | Msa0215690:CDS | 30.0% |
| ! | ATGGTATTTGGCTTCAAAAT+TGG | - | chr2_1:61090063-61090082 | Msa0215690:CDS | 30.0% |
| !! | TTAGTTTTCCAATACAAAGG+AGG | - | chr2_1:61090122-61090141 | Msa0215690:CDS | 30.0% |
| ! | TAGTTTTCCAATACAAAGGA+GGG | - | chr2_1:61090123-61090142 | Msa0215690:CDS | 30.0% |
| ! | CCAAAATTTGAGATGAACTA+AGG | + | chr2_1:61090509-61090528 | None:intergenic | 30.0% |
| ! | CCTTAGTTCATCTCAAATTT+TGG | - | chr2_1:61090506-61090525 | Msa0215690:CDS | 30.0% |
| ! | AACTATTTTCAGCATTTGGA+AGG | + | chr2_1:61090686-61090705 | None:intergenic | 30.0% |
| GATAATATGAGAGTGAAACT+AGG | + | chr2_1:61090819-61090838 | None:intergenic | 30.0% | |
| AACTAGAAGAAGAGACATTT+AGG | - | chr2_1:61091125-61091144 | Msa0215690:intron | 30.0% | |
| TATTCTTTCGAAAACCAACT+AGG | + | chr2_1:61091265-61091284 | None:intergenic | 30.0% | |
| CATATGAATGAGTTATTGCA+AGG | - | chr2_1:61091285-61091304 | Msa0215690:intron | 30.0% | |
| !! | ATGCGCTTTTGTAATTTGTA+TGG | + | chr2_1:61091767-61091786 | None:intergenic | 30.0% |
| ! | ATCTGAAGGGTACAAAAAAA+AGG | + | chr2_1:61091894-61091913 | None:intergenic | 30.0% |
| ! | AATTATTTTCGGCATCTGAA+GGG | + | chr2_1:61091907-61091926 | None:intergenic | 30.0% |
| ! | AAATTATTTTCGGCATCTGA+AGG | + | chr2_1:61091908-61091927 | None:intergenic | 30.0% |
| ! | TTTTTGTGCATTTCTTATCC+CGG | + | chr2_1:61091958-61091977 | None:intergenic | 30.0% |
| AAATGCACAAAAACTGAAGA+TGG | - | chr2_1:61091965-61091984 | Msa0215690:intron | 30.0% | |
| AATGCACAAAAACTGAAGAT+GGG | - | chr2_1:61091966-61091985 | Msa0215690:intron | 30.0% | |
| AATAATATGAGAGTGAAGCT+AGG | + | chr2_1:61092031-61092050 | None:intergenic | 30.0% | |
| TAGCTTCACTCTCATATTAT+TGG | - | chr2_1:61092030-61092049 | Msa0215690:CDS | 30.0% | |
| TGTTGAAGGTGATAATAGAT+TGG | - | chr2_1:61092060-61092079 | Msa0215690:CDS | 30.0% | |
| ACTATACGAACTGATTGTAT+TGG | - | chr2_1:61092155-61092174 | Msa0215690:intron | 30.0% | |
| CTATTAACAAAGGAGACATT+TGG | + | chr2_1:61092198-61092217 | None:intergenic | 30.0% | |
| TTGATCTTCAAATGTGTCTT+TGG | + | chr2_1:61091102-61091121 | None:intergenic | 30.0% | |
| TATTCTTTCGAAAACCAACT+AGG | + | chr2_1:61091265-61091284 | None:intergenic | 30.0% | |
| TACATGAATGAGTTATTGCA+AGG | - | chr2_1:61092438-61092457 | Msa0215690:intron | 30.0% | |
| ACATGAATGAGTTATTGCAA+GGG | - | chr2_1:61092439-61092458 | Msa0215690:intron | 30.0% | |
| TCCCATTCGAAAATTTATTC+TGG | + | chr2_1:61092532-61092551 | None:intergenic | 30.0% | |
| ! | ATAAATTTTCGAATGGGAAG+TGG | - | chr2_1:61092534-61092553 | Msa0215690:intron | 30.0% |
| ATAGTAATCGTGAATGAAAG+TGG | + | chr2_1:61092633-61092652 | None:intergenic | 30.0% | |
| AACGCAATAAAATAGAGCTT+GGG | + | chr2_1:61092910-61092929 | None:intergenic | 30.0% | |
| !! | AGTATTTGTTATGGTTACGT+CGG | + | chr2_1:61092999-61093018 | None:intergenic | 30.0% |
| ! | CGTTGAACAAGTATTTGTTA+TGG | + | chr2_1:61093008-61093027 | None:intergenic | 30.0% |
| AAACAACAGTAATAAGTGGA+CGG | + | chr2_1:61093135-61093154 | None:intergenic | 30.0% | |
| GAGATATGAAAAGCCAAAAA+AGG | + | chr2_1:61093292-61093311 | None:intergenic | 30.0% | |
| ! | GCATATTCCATATCTTTTAC+GGG | + | chr2_1:61094186-61094205 | None:intergenic | 30.0% |
| ! | CGCATATTCCATATCTTTTA+CGG | + | chr2_1:61094187-61094206 | None:intergenic | 30.0% |
| CGTAAAAGATATGGAATATG+CGG | - | chr2_1:61094185-61094204 | Msa0215690:intron | 30.0% | |
| GTAAAAGATATGGAATATGC+GGG | - | chr2_1:61094186-61094205 | Msa0215690:intron | 30.0% | |
| !! | ATTTTGGAGATGGAATTTCA+AGG | - | chr2_1:61094211-61094230 | Msa0215690:intron | 30.0% |
| ! | GTACAAAAACACATGGTTTT+AGG | - | chr2_1:61094238-61094257 | Msa0215690:intron | 30.0% |
| !!! | ACAAAAACACATGGTTTTAG+GGG | - | chr2_1:61094240-61094259 | Msa0215690:intron | 30.0% |
| GAATTTACATGAGATGTTCA+AGG | - | chr2_1:61094366-61094385 | Msa0215690:intron | 30.0% | |
| TCTTATAACATCATCAGACA+AGG | - | chr2_1:61094390-61094409 | Msa0215690:intron | 30.0% | |
| ! | AAGAAGCATGGTATATTTAG+TGG | - | chr2_1:61094522-61094541 | Msa0215690:intron | 30.0% |
| TATATTTAGTGGAAATTCCG+TGG | - | chr2_1:61094533-61094552 | Msa0215690:CDS | 30.0% | |
| TATAATGAACATCTCGACTA+TGG | - | chr2_1:61094597-61094616 | Msa0215690:CDS | 30.0% | |
| GTCAGTGTGCAAAATGAATT+GGG | - | chr2_1:61090028-61090047 | Msa0215690:CDS | 35.0% | |
| ! | TTTGGCTTCAAAATTGGAAG+AGG | - | chr2_1:61090069-61090088 | Msa0215690:CDS | 35.0% |
| AAACTAAAAGATCTCCGCAT+CGG | + | chr2_1:61090109-61090128 | None:intergenic | 35.0% | |
| ! | CTTACCAGAAACTTTTTGCT+GGG | + | chr2_1:61090426-61090445 | None:intergenic | 35.0% |
| ! | ACTTACCAGAAACTTTTTGC+TGG | + | chr2_1:61090427-61090446 | None:intergenic | 35.0% |
| ! | TAAAGTTTTGCAGAGGCTAA+TGG | - | chr2_1:61090708-61090727 | Msa0215690:intron | 35.0% |
| GTGAAACTAGGATTCTCATT+GGG | + | chr2_1:61090807-61090826 | None:intergenic | 35.0% | |
| AGTGAAACTAGGATTCTCAT+TGG | + | chr2_1:61090808-61090827 | None:intergenic | 35.0% | |
| TTATCACCATATCACGTTGA+AGG | - | chr2_1:61090834-61090853 | Msa0215690:intron | 35.0% | |
| ! | AGAGGCTTTCATTTTACTAG+AGG | - | chr2_1:61090926-61090945 | Msa0215690:intron | 35.0% |
| ATTCATGCATGAAATGTGCA+AGG | + | chr2_1:61091195-61091214 | None:intergenic | 35.0% | |
| TTTATACCATGACCTGAAAC+AGG | - | chr2_1:61091234-61091253 | Msa0215690:intron | 35.0% | |
| ! | AAGGCAACAATTAGAAGTGT+TGG | - | chr2_1:61091309-61091328 | Msa0215690:intron | 35.0% |
| !! | AACAATTAGAAGTGTTGGTG+AGG | - | chr2_1:61091314-61091333 | Msa0215690:intron | 35.0% |
| !!! | AGTAGTTTTGTAATGACGCT+TGG | - | chr2_1:61091378-61091397 | Msa0215690:intron | 35.0% |
| !! | TGGTTGGAAGTCATTTTCAA+AGG | - | chr2_1:61091398-61091417 | Msa0215690:intron | 35.0% |
| AAGGAACATGACTTGAAAGT+TGG | - | chr2_1:61091417-61091436 | Msa0215690:intron | 35.0% | |
| TACTATTATCCCAACCACAA+AGG | - | chr2_1:61091491-61091510 | Msa0215690:intron | 35.0% | |
| ATAATACCTTGAAACTGCTC+TGG | + | chr2_1:61091525-61091544 | None:intergenic | 35.0% | |
| !!! | AAAAGCGCATGTTTTAATCC+TGG | - | chr2_1:61091777-61091796 | Msa0215690:intron | 35.0% |
| TACATTAATAAAGTGGGTCC+AGG | + | chr2_1:61091798-61091817 | None:intergenic | 35.0% | |
| ! | TGAAGTTTTGCAAAGGCTAA+TGG | - | chr2_1:61091929-61091948 | Msa0215690:intron | 35.0% |
| TTATTGGCATGTCATGTTGA+AGG | - | chr2_1:61092046-61092065 | Msa0215690:CDS | 35.0% | |
| TTTAAACCATGACCTGAAAC+AGG | - | chr2_1:61092389-61092408 | Msa0215690:intron | 35.0% | |
| ! | AAGGCAACAATTAGAAGTGT+TGG | - | chr2_1:61091309-61091328 | Msa0215690:intron | 35.0% |
| !! | AACAATTAGAAGTGTTGGTG+AGG | - | chr2_1:61091314-61091333 | Msa0215690:intron | 35.0% |
| TACTATCATCTCAACCACAA+AGG | - | chr2_1:61092647-61092666 | Msa0215690:CDS | 35.0% | |
| ACGCAATAAAATAGAGCTTG+GGG | + | chr2_1:61092909-61092928 | None:intergenic | 35.0% | |
| CAACGCAATAAAATAGAGCT+TGG | + | chr2_1:61092911-61092930 | None:intergenic | 35.0% | |
| ! | CAAGCTCTATTTTATTGCGT+TGG | - | chr2_1:61092909-61092928 | Msa0215690:intron | 35.0% |
| ACAAATACTTGTTCAACGGT+CGG | - | chr2_1:61093010-61093029 | Msa0215690:intron | 35.0% | |
| TGAGACAAATCAGTTTCACA+TGG | - | chr2_1:61093057-61093076 | Msa0215690:intron | 35.0% | |
| CAAATCAGTTTCACATGGTT+TGG | - | chr2_1:61093062-61093081 | Msa0215690:intron | 35.0% | |
| TTCTGTCAAAATGGAATGAG+CGG | - | chr2_1:61093100-61093119 | Msa0215690:intron | 35.0% | |
| AACAACAGTAATAAGTGGAC+GGG | + | chr2_1:61093134-61093153 | None:intergenic | 35.0% | |
| AGAGAGAAGAAACAAGAACA+GGG | - | chr2_1:61093400-61093419 | Msa0215690:intron | 35.0% | |
| !! | ATGAGGTTTTATGACAGCAA+GGG | + | chr2_1:61093663-61093682 | None:intergenic | 35.0% |
| GTCATAAAACCTCATGATGA+AGG | - | chr2_1:61093668-61093687 | Msa0215690:intron | 35.0% | |
| AACCTCATGATGAAGGATAA+TGG | - | chr2_1:61093675-61093694 | Msa0215690:intron | 35.0% | |
| ! | TCATGATGAAGGATAATGGT+GGG | - | chr2_1:61093679-61093698 | Msa0215690:intron | 35.0% |
| CTAAAAGTGATATATCTGCC+AGG | - | chr2_1:61094003-61094022 | Msa0215690:intron | 35.0% | |
| ! | GTGTTGTCTCTGATTTTTCT+TGG | + | chr2_1:61094164-61094183 | None:intergenic | 35.0% |
| CACACACATAGCTATATACA+TGG | + | chr2_1:61094440-61094459 | None:intergenic | 35.0% | |
| TGTGAGAGATTGCAAAGTAA+AGG | - | chr2_1:61094647-61094666 | Msa0215690:CDS | 35.0% | |
| TGTGCAAAATCATGTGTTCA+AGG | - | chr2_1:61094701-61094720 | Msa0215690:CDS | 35.0% | |
| ! | ATTTTGCACACTGACCCATT+TGG | + | chr2_1:61090023-61090042 | None:intergenic | 40.0% |
| GGTCAGTGTGCAAAATGAAT+TGG | - | chr2_1:61090027-61090046 | Msa0215690:CDS | 40.0% | |
| AATCTGACCCTCCTTTGTAT+TGG | + | chr2_1:61090133-61090152 | None:intergenic | 40.0% | |
| ! | AGTAGCAATGCCATTTGAGT+TGG | + | chr2_1:61090345-61090364 | None:intergenic | 40.0% |
| CTACTACTGTTACACCTCAA+CGG | - | chr2_1:61090363-61090382 | Msa0215690:intron | 40.0% | |
| TTGTCAATGTTAGTCCGTTG+AGG | + | chr2_1:61090380-61090399 | None:intergenic | 40.0% | |
| ATTCTCATTGGGATGCTCAA+TGG | + | chr2_1:61090796-61090815 | None:intergenic | 40.0% | |
| CTATCACCTTCAACGTGATA+TGG | + | chr2_1:61090843-61090862 | None:intergenic | 40.0% | |
| CGTTGAAGGTGATAGAAGAT+TGG | - | chr2_1:61090848-61090867 | Msa0215690:intron | 40.0% | |
| TTTGTACCAAACTGTGTGAG+AGG | - | chr2_1:61090908-61090927 | Msa0215690:intron | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | - | chr2_1:61091290-61091309 | Msa0215690:intron | 40.0% | |
| ! | GTTTTGTAATGACGCTTGGT+TGG | - | chr2_1:61091382-61091401 | Msa0215690:intron | 40.0% |
| GACATGATTCCTTTGTGGTT+GGG | + | chr2_1:61091503-61091522 | None:intergenic | 40.0% | |
| TTGCAAAGGCTAATGGAAAC+CGG | - | chr2_1:61091936-61091955 | Msa0215690:intron | 40.0% | |
| GTGAAGCTAGGATTCTCATT+GGG | + | chr2_1:61092019-61092038 | None:intergenic | 40.0% | |
| AGTGAAGCTAGGATTCTCAT+TGG | + | chr2_1:61092020-61092039 | None:intergenic | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | - | chr2_1:61091290-61091309 | Msa0215690:intron | 40.0% | |
| !! | AATTAGAAGTGTTGGTGAGG+AGG | - | chr2_1:61091317-61091336 | Msa0215690:intron | 40.0% |
| ! | ATTTTCGAATGGGAAGTGGT+TGG | - | chr2_1:61092538-61092557 | Msa0215690:intron | 40.0% |
| !! | GTGGTTGGAAGTCATTTTCA+CGG | - | chr2_1:61092553-61092572 | Msa0215690:intron | 40.0% |
| !! | TGGTTGGAAGTCATTTTCAC+GGG | - | chr2_1:61092554-61092573 | Msa0215690:intron | 40.0% |
| CGCAATAAAATAGAGCTTGG+GGG | + | chr2_1:61092908-61092927 | None:intergenic | 40.0% | |
| GTTATGGTTACGTCGGATTT+CGG | + | chr2_1:61092992-61093011 | None:intergenic | 40.0% | |
| ! | CAGTTTCACATGGTTTGGAA+CGG | - | chr2_1:61093067-61093086 | Msa0215690:intron | 40.0% |
| ACATACATTGGACAGTGTGT+AGG | + | chr2_1:61093223-61093242 | None:intergenic | 40.0% | |
| ! | GTTTGATGGCACACATACAT+TGG | + | chr2_1:61093235-61093254 | None:intergenic | 40.0% |
| ATGTATGTGTGCCATCAAAC+AGG | - | chr2_1:61093235-61093254 | Msa0215690:CDS | 40.0% | |
| TGTATGTGTGCCATCAAACA+GGG | - | chr2_1:61093236-61093255 | Msa0215690:CDS | 40.0% | |
| ! | TTGTTTCTTCTCTCTGGTAG+TGG | + | chr2_1:61093395-61093414 | None:intergenic | 40.0% |
| ! | CTGTTCTTGTTTCTTCTCTC+TGG | + | chr2_1:61093401-61093420 | None:intergenic | 40.0% |
| CAGAGAGAAGAAACAAGAAC+AGG | - | chr2_1:61093399-61093418 | Msa0215690:intron | 40.0% | |
| GAGATGAGAGATATACAGAG+AGG | - | chr2_1:61093441-61093460 | Msa0215690:intron | 40.0% | |
| !! | TGAGGTTTTATGACAGCAAG+GGG | + | chr2_1:61093662-61093681 | None:intergenic | 40.0% |
| !! | CATGAGGTTTTATGACAGCA+AGG | + | chr2_1:61093664-61093683 | None:intergenic | 40.0% |
| CACCATTATCCTTCATCATG+AGG | + | chr2_1:61093680-61093699 | None:intergenic | 40.0% | |
| ! | CTCATGATGAAGGATAATGG+TGG | - | chr2_1:61093678-61093697 | Msa0215690:intron | 40.0% |
| GTTGTGGGTAGTGTAAATTG+TGG | - | chr2_1:61093701-61093720 | Msa0215690:intron | 40.0% | |
| AGGGATCTACTGAAGAAGTT+GGG | + | chr2_1:61094105-61094124 | None:intergenic | 40.0% | |
| ACATGTCCACAAACTTCTCA+GGG | + | chr2_1:61094124-61094143 | None:intergenic | 40.0% | |
| ! | CTGATTTTTCTTGGACTCCT+TGG | + | chr2_1:61094155-61094174 | None:intergenic | 40.0% |
| GACAACACCCGTAAAAGATA+TGG | - | chr2_1:61094176-61094195 | Msa0215690:intron | 40.0% | |
| ! | ATGGAATATGCGGGCAATTT+TGG | - | chr2_1:61094195-61094214 | Msa0215690:intron | 40.0% |
| AGGAGCTGTACAAAAACACA+TGG | - | chr2_1:61094231-61094250 | Msa0215690:intron | 40.0% | |
| ATGAACATCTCGACTATGGT+TGG | - | chr2_1:61094601-61094620 | Msa0215690:CDS | 40.0% | |
| ! | GACTATGGTTGGTTCACTAA+AGG | - | chr2_1:61094612-61094631 | Msa0215690:CDS | 40.0% |
| ! | ATGGTTGGTTCACTAAAGGT+TGG | - | chr2_1:61094616-61094635 | Msa0215690:CDS | 40.0% |
| AGAGATTGCAAAGTAAAGGC+TGG | - | chr2_1:61094651-61094670 | Msa0215690:CDS | 40.0% | |
| TGCAACGCAGTGATGGTATT+TGG | - | chr2_1:61090051-61090070 | Msa0215690:CDS | 45.0% | |
| ! | TTTGCAAGTTTGCTCCGATG+CGG | - | chr2_1:61090092-61090111 | Msa0215690:CDS | 45.0% |
| ! | GCGGTTCTCTTTTTCTTGAG+GGG | + | chr2_1:61090323-61090342 | None:intergenic | 45.0% |
| ! | GGCGGTTCTCTTTTTCTTGA+GGG | + | chr2_1:61090324-61090343 | None:intergenic | 45.0% |
| ! | TGGCGGTTCTCTTTTTCTTG+AGG | + | chr2_1:61090325-61090344 | None:intergenic | 45.0% |
| AAGAGAACCGCCAACTCAAA+TGG | - | chr2_1:61090332-61090351 | Msa0215690:intron | 45.0% | |
| !! | AGCAATGCCATTTGAGTTGG+CGG | + | chr2_1:61090342-61090361 | None:intergenic | 45.0% |
| GCAACCCAGCAAAAAGTTTC+TGG | - | chr2_1:61090419-61090438 | Msa0215690:intron | 45.0% | |
| TAATGGAAACACAGGAGGCA+TGG | - | chr2_1:61090725-61090744 | Msa0215690:intron | 45.0% | |
| ! | AATGGAAACACAGGAGGCAT+GGG | - | chr2_1:61090726-61090745 | Msa0215690:intron | 45.0% |
| TGAAAGCCTCTCACACAGTT+TGG | + | chr2_1:61090917-61090936 | None:intergenic | 45.0% | |
| AACTAGGTAACGCCTGTTTC+AGG | + | chr2_1:61091249-61091268 | None:intergenic | 45.0% | |
| TGAAACAGGCGTTACCTAGT+TGG | - | chr2_1:61091248-61091267 | Msa0215690:intron | 45.0% | |
| !! | TTAGAAGTGTTGGTGAGGAC+AGG | - | chr2_1:61091319-61091338 | Msa0215690:intron | 45.0% |
| !! | TAGAAGTGTTGGTGAGGACA+GGG | - | chr2_1:61091320-61091339 | Msa0215690:intron | 45.0% |
| GGACATGATTCCTTTGTGGT+TGG | + | chr2_1:61091504-61091523 | None:intergenic | 45.0% | |
| CTCTGGACATGATTCCTTTG+TGG | + | chr2_1:61091508-61091527 | None:intergenic | 45.0% | |
| TCATGTCCAGAGCAGTTTCA+AGG | - | chr2_1:61091516-61091535 | Msa0215690:intron | 45.0% | |
| TGCAAAGGCTAATGGAAACC+GGG | - | chr2_1:61091937-61091956 | Msa0215690:intron | 45.0% | |
| ! | AACTAGGTATCGCCTGTTTC+AGG | + | chr2_1:61092404-61092423 | None:intergenic | 45.0% |
| TGAAACAGGCGATACCTAGT+TGG | - | chr2_1:61092403-61092422 | Msa0215690:intron | 45.0% | |
| TTGGTGAGGAGGATAGAACA+TGG | - | chr2_1:61092481-61092500 | Msa0215690:intron | 45.0% | |
| ! | CGGGAACATAACTTGCAAGT+CGG | - | chr2_1:61092573-61092592 | Msa0215690:intron | 45.0% |
| ATCTCAACCACAAAGGAACC+AGG | - | chr2_1:61092654-61092673 | Msa0215690:CDS | 45.0% | |
| CGAAAGCGGTTCTGTCAAAA+TGG | - | chr2_1:61093091-61093110 | Msa0215690:intron | 45.0% | |
| ! | CAGTAATAAGTGGACGGGTT+CGG | + | chr2_1:61093129-61093148 | None:intergenic | 45.0% |
| TCAAGACACACCCTGTTTGA+TGG | + | chr2_1:61093249-61093268 | None:intergenic | 45.0% | |
| !! | TTCTTCTCTCTGGTAGTGGT+GGG | + | chr2_1:61093391-61093410 | None:intergenic | 45.0% |
| !! | TTTCTTCTCTCTGGTAGTGG+TGG | + | chr2_1:61093392-61093411 | None:intergenic | 45.0% |
| GGTCTAACGGAATAACAGGT+GGG | + | chr2_1:61093522-61093541 | None:intergenic | 45.0% | |
| GACCGTTTCAACGTCAGTTT+CGG | + | chr2_1:61093554-61093573 | None:intergenic | 45.0% | |
| GAAACTGACGTTGAAACGGT+CGG | - | chr2_1:61093553-61093572 | Msa0215690:intron | 45.0% | |
| AAACTGACGTTGAAACGGTC+GGG | - | chr2_1:61093554-61093573 | Msa0215690:intron | 45.0% | |
| GGTTCACGTGTTCTGATCTA+CGG | - | chr2_1:61093580-61093599 | Msa0215690:intron | 45.0% | |
| GTTCACGTGTTCTGATCTAC+GGG | - | chr2_1:61093581-61093600 | Msa0215690:intron | 45.0% | |
| TCTGATCTACGGGTGTTCTT+CGG | - | chr2_1:61093591-61093610 | Msa0215690:intron | 45.0% | |
| TTCTTCGGTGAGCAGTTGTT+GGG | - | chr2_1:61093606-61093625 | Msa0215690:intron | 45.0% | |
| !! | TGAAGGATAATGGTGGGTTG+TGG | - | chr2_1:61093685-61093704 | Msa0215690:intron | 45.0% |
| !! | GAAGGATAATGGTGGGTTGT+GGG | - | chr2_1:61093686-61093705 | Msa0215690:intron | 45.0% |
| GGGATCTACTGAAGAAGTTG+GGG | + | chr2_1:61094104-61094123 | None:intergenic | 45.0% | |
| CAGGGATCTACTGAAGAAGT+TGG | + | chr2_1:61094106-61094125 | None:intergenic | 45.0% | |
| GTAGATCCCTGAGAAGTTTG+TGG | - | chr2_1:61094115-61094134 | Msa0215690:intron | 45.0% | |
| CACATGTCCACAAACTTCTC+AGG | + | chr2_1:61094125-61094144 | None:intergenic | 45.0% | |
| TGGACATGTGCAGAAAACCA+AGG | - | chr2_1:61094135-61094154 | Msa0215690:intron | 45.0% | |
| !! | TATGCGGGCAATTTTGGAGA+TGG | - | chr2_1:61094201-61094220 | Msa0215690:intron | 45.0% |
| TGCTTCTTCAACAGCTCACT+TGG | + | chr2_1:61094510-61094529 | None:intergenic | 45.0% | |
| AGTGAGCTGTTGAAGAAGCA+TGG | - | chr2_1:61094510-61094529 | Msa0215690:intron | 45.0% | |
| AATTCCGTGGAGTTGAGAGT+AGG | - | chr2_1:61094546-61094565 | Msa0215690:CDS | 45.0% | |
| ATTCCGTGGAGTTGAGAGTA+GGG | - | chr2_1:61094547-61094566 | Msa0215690:CDS | 45.0% | |
| ! | GGAAGGAACATGGTTTGTAG+AGG | - | chr2_1:61094569-61094588 | Msa0215690:CDS | 45.0% |
| !! | AAAATATACATAAATAAAAT+GGG | + | chr2_1:61090597-61090616 | None:intergenic | 5.0% |
| !! | AAAAATATACATAAATAAAA+TGG | + | chr2_1:61090598-61090617 | None:intergenic | 5.0% |
| AATTGGGTGCAACGCAGTGA+TGG | - | chr2_1:61090044-61090063 | Msa0215690:CDS | 50.0% | |
| GCAGAGGCTAATGGAAACAC+AGG | - | chr2_1:61090717-61090736 | Msa0215690:intron | 50.0% | |
| GAGGCTAATGGAAACACAGG+AGG | - | chr2_1:61090720-61090739 | Msa0215690:intron | 50.0% | |
| ! | GTAACGCCTGTTTCAGGTCA+TGG | + | chr2_1:61091243-61091262 | None:intergenic | 50.0% |
| TTTGTGCCTAGCTGTGTGAG+AGG | - | chr2_1:61092122-61092141 | Msa0215690:CDS | 50.0% | |
| TGAAAGCCTCTCACACAGCT+AGG | + | chr2_1:61092131-61092150 | None:intergenic | 50.0% | |
| ! | GTATCGCCTGTTTCAGGTCA+TGG | + | chr2_1:61092398-61092417 | None:intergenic | 50.0% |
| AACCACAAAGGAACCAGGCT+CGG | - | chr2_1:61092659-61092678 | Msa0215690:CDS | 50.0% | |
| ! | CCTTGAAACTTTTCCGAGCC+TGG | + | chr2_1:61092675-61092694 | None:intergenic | 50.0% |
| CCAGGCTCGGAAAAGTTTCA+AGG | - | chr2_1:61092672-61092691 | Msa0215690:CDS | 50.0% | |
| TGGTTACGTCGGATTTCGGT+CGG | + | chr2_1:61092988-61093007 | None:intergenic | 50.0% | |
| GTTCAACGGTCGGATGTGTA+CGG | - | chr2_1:61093020-61093039 | Msa0215690:intron | 50.0% | |
| TTCAACGGTCGGATGTGTAC+GGG | - | chr2_1:61093021-61093040 | Msa0215690:intron | 50.0% | |
| ! | TGGTTTGGAACGGACGAAAG+CGG | - | chr2_1:61093077-61093096 | Msa0215690:intron | 50.0% |
| TAACGGAATAACAGGTGGGC+CGG | + | chr2_1:61093518-61093537 | None:intergenic | 50.0% | |
| GGGTCTAACGGAATAACAGG+TGG | + | chr2_1:61093523-61093542 | None:intergenic | 50.0% | |
| GACGGGTCTAACGGAATAAC+AGG | + | chr2_1:61093526-61093545 | None:intergenic | 50.0% | |
| GTTTCAACGTCAGTTTCGGC+GGG | + | chr2_1:61093550-61093569 | None:intergenic | 50.0% | |
| CGTTTCAACGTCAGTTTCGG+CGG | + | chr2_1:61093551-61093570 | None:intergenic | 50.0% | |
| CGCCGAAACTGACGTTGAAA+CGG | - | chr2_1:61093549-61093568 | Msa0215690:intron | 50.0% | |
| GTTCTTCGGTGAGCAGTTGT+TGG | - | chr2_1:61093605-61093624 | Msa0215690:intron | 50.0% | |
| GTGTGTAGAGTGTGTGTTCG+CGG | - | chr2_1:61093796-61093815 | Msa0215690:intron | 50.0% | |
| TTCCGTGGAGTTGAGAGTAG+GGG | - | chr2_1:61094548-61094567 | Msa0215690:CDS | 50.0% | |
| TTCCCCTACTCTCAACTCCA+CGG | + | chr2_1:61094553-61094572 | None:intergenic | 50.0% | |
| TGAGAGTAGGGGAAGGAACA+TGG | - | chr2_1:61094559-61094578 | Msa0215690:CDS | 50.0% | |
| ! | GTGTTGGTGAGGACAGGGTA+TGG | - | chr2_1:61091325-61091344 | Msa0215690:intron | 55.0% |
| TTCCGAGCCTGGTTCCTTTG+TGG | + | chr2_1:61092664-61092683 | None:intergenic | 55.0% | |
| !! | AGCTTGGGGGACTAGCTGAA+GGG | + | chr2_1:61092895-61092914 | None:intergenic | 55.0% |
| ! | TACAACCGAGCCAAAGCACC+CGG | - | chr2_1:61093496-61093515 | Msa0215690:intron | 55.0% |
| AACGGAATAACAGGTGGGCC+GGG | + | chr2_1:61093517-61093536 | None:intergenic | 55.0% | |
| GACGTTGAAACGGTCGGGAA+TGG | - | chr2_1:61093559-61093578 | Msa0215690:intron | 55.0% | |
| GTGGAGTTGAGAGTAGGGGA+AGG | - | chr2_1:61094552-61094571 | Msa0215690:CDS | 55.0% | |
| !! | GAGCTTGGGGGACTAGCTGA+AGG | + | chr2_1:61092896-61092915 | None:intergenic | 60.0% |
| GGTCGGATGTGTACGGGCTT+CGG | - | chr2_1:61093027-61093046 | Msa0215690:intron | 60.0% | |
| ACGTCAGTTTCGGCGGGTGA+CGG | + | chr2_1:61093544-61093563 | None:intergenic | 60.0% | |
| TGACAGCAAGGGGTGAGCAC+CGG | + | chr2_1:61093652-61093671 | None:intergenic | 60.0% | |
| TCTCACACTTCACGCGCGCG+TGG | + | chr2_1:61093173-61093192 | None:intergenic | 65.0% | |
| AACAGGTGGGCCGGGTGCTT+TGG | + | chr2_1:61093509-61093528 | None:intergenic | 65.0% | |
| !! | TCGGCGGGTGACGGGTCTAA+CGG | + | chr2_1:61093535-61093554 | None:intergenic | 65.0% |
| CGTCAGTTTCGGCGGGTGAC+GGG | + | chr2_1:61093543-61093562 | None:intergenic | 65.0% | |
| ! | CGGTCGGTTACGGGCGGATT+CGG | + | chr2_1:61093632-61093651 | None:intergenic | 65.0% |
| CGAATCCGCCCGTAACCGAC+CGG | - | chr2_1:61093630-61093649 | Msa0215690:intron | 65.0% | |
| !! | GGTGAGCACCGGTCGGTTAC+GGG | + | chr2_1:61093641-61093660 | None:intergenic | 65.0% |
| !! | GGGTGAGCACCGGTCGGTTA+CGG | + | chr2_1:61093642-61093661 | None:intergenic | 65.0% |
| !! | AGCAAGGGGTGAGCACCGGT+CGG | + | chr2_1:61093648-61093667 | None:intergenic | 65.0% |
| GTGGGCCGGGTGCTTTGGCT+CGG | + | chr2_1:61093504-61093523 | None:intergenic | 70.0% | |
| !! | GAGCACCGGTCGGTTACGGG+CGG | + | chr2_1:61093638-61093657 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 61089954 | 61094737 | 61089954 | ID=Msa0215690;Name=Msa0215690 |
| chr2_1 | mRNA | 61089954 | 61094737 | 61089954 | ID=Msa0215690-mRNA-1;Parent=Msa0215690;Name=Msa0215690-mRNA-1;_AED=0.17;_eAED=0.24;_QI=0|0|0|1|0.55|0.3|10|0|493 |
| chr2_1 | exon | 61094528 | 61094737 | 61094528 | ID=Msa0215690-mRNA-1:exon:16868;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61094251 | 61094356 | 61094251 | ID=Msa0215690-mRNA-1:exon:16867;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61093843 | 61093970 | 61093843 | ID=Msa0215690-mRNA-1:exon:16866;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61093154 | 61093379 | 61093154 | ID=Msa0215690-mRNA-1:exon:16865;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61092624 | 61092757 | 61092624 | ID=Msa0215690-mRNA-1:exon:16864;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61092180 | 61092280 | 61092180 | ID=Msa0215690-mRNA-1:exon:16863;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61091998 | 61092158 | 61091998 | ID=Msa0215690-mRNA-1:exon:16862;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61090430 | 61090543 | 61090430 | ID=Msa0215690-mRNA-1:exon:16861;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61090280 | 61090338 | 61090280 | ID=Msa0215690-mRNA-1:exon:16860;Parent=Msa0215690-mRNA-1 |
| chr2_1 | exon | 61089954 | 61090196 | 61089954 | ID=Msa0215690-mRNA-1:exon:16859;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61094528 | 61094737 | 61094528 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61094251 | 61094356 | 61094251 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61093843 | 61093970 | 61093843 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61093154 | 61093379 | 61093154 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61092624 | 61092757 | 61092624 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61092180 | 61092280 | 61092180 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61091998 | 61092158 | 61091998 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61090430 | 61090543 | 61090430 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61090280 | 61090338 | 61090280 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| chr2_1 | CDS | 61089954 | 61090196 | 61089954 | ID=Msa0215690-mRNA-1:cds;Parent=Msa0215690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
