Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0215770 | KEH40807.1 | 85.372 | 417 | 46 | 4 | 1 | 405 | 1 | 414 | 0.0 | 719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0215770 | A0A072VG97 | 85.372 | 417 | 46 | 4 | 1 | 405 | 1 | 414 | 0.0 | 719 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0215770 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0215770 | MtrunA17_Chr1g0163231 | 83.793 | 290 | 35 | 2 | 1 | 279 | 1 | 289 | 4.18e-178 | 498 |
| Msa0215770 | MtrunA17_Chr1g0171611 | 79.252 | 294 | 33 | 3 | 1 | 279 | 1 | 281 | 4.29e-159 | 449 |
| Msa0215770 | MtrunA17_Chr1g0163181 | 41.629 | 442 | 201 | 11 | 1 | 399 | 1 | 428 | 5.41e-105 | 317 |
| Msa0215770 | MtrunA17_Chr1g0163201 | 43.489 | 407 | 166 | 11 | 24 | 399 | 18 | 391 | 7.49e-98 | 298 |
| Msa0215770 | MtrunA17_Chr1g0163261 | 51.525 | 295 | 109 | 8 | 1 | 271 | 1 | 285 | 2.83e-91 | 277 |
| Msa0215770 | MtrunA17_Chr1g0163251 | 44.611 | 334 | 146 | 10 | 1 | 304 | 1 | 325 | 2.37e-82 | 257 |
| Msa0215770 | MtrunA17_Chr1g0163111 | 42.400 | 250 | 121 | 8 | 150 | 399 | 1 | 227 | 2.39e-52 | 174 |
| Msa0215770 | MtrunA17_Chr1g0163151 | 40.239 | 251 | 118 | 7 | 150 | 399 | 1 | 220 | 3.12e-51 | 171 |
| Msa0215770 | MtrunA17_Chr1g0162151 | 41.538 | 260 | 100 | 11 | 150 | 405 | 1 | 212 | 1.36e-42 | 149 |
| Msa0215770 | MtrunA17_Chr6g0476171 | 33.962 | 265 | 144 | 4 | 143 | 399 | 3 | 244 | 1.33e-36 | 134 |
| Msa0215770 | MtrunA17_Chr1g0163241 | 51.562 | 128 | 46 | 4 | 24 | 136 | 22 | 148 | 3.29e-32 | 119 |
| Msa0215770 | MtrunA17_Chr1g0163191 | 47.967 | 123 | 49 | 2 | 1 | 112 | 1 | 119 | 8.76e-31 | 115 |
| Msa0215770 | MtrunA17_Chr7g0233561 | 29.373 | 303 | 166 | 10 | 6 | 267 | 15 | 310 | 5.99e-28 | 112 |
| Msa0215770 | MtrunA17_Chr1g0163091 | 48.800 | 125 | 57 | 4 | 150 | 271 | 1 | 121 | 1.38e-27 | 107 |
| Msa0215770 | MtrunA17_Chr3g0131891 | 27.946 | 297 | 168 | 10 | 6 | 267 | 16 | 301 | 7.13e-27 | 109 |
| Msa0215770 | MtrunA17_Chr8g0390841 | 22.645 | 499 | 261 | 18 | 9 | 401 | 39 | 518 | 4.79e-24 | 103 |
| Msa0215770 | MtrunA17_Chr1g0162161 | 39.456 | 147 | 57 | 5 | 25 | 145 | 4 | 144 | 6.53e-23 | 94.4 |
| Msa0215770 | MtrunA17_Chr1g0163131 | 40.909 | 154 | 79 | 5 | 256 | 399 | 154 | 305 | 4.65e-22 | 95.9 |
| Msa0215770 | MtrunA17_Chr1g0163131 | 26.599 | 297 | 181 | 8 | 5 | 268 | 14 | 306 | 7.22e-20 | 89.4 |
| Msa0215770 | MtrunA17_Chr1g0208771 | 23.491 | 464 | 252 | 15 | 24 | 401 | 12 | 458 | 3.52e-21 | 95.1 |
| Msa0215770 | MtrunA17_Chr1g0163101 | 35.838 | 173 | 78 | 7 | 2 | 145 | 3 | 171 | 2.98e-20 | 87.8 |
| Msa0215770 | MtrunA17_Chr4g0067431 | 25.000 | 308 | 170 | 10 | 9 | 267 | 15 | 310 | 1.26e-19 | 89.0 |
| Msa0215770 | MtrunA17_Chr7g0233531 | 28.000 | 275 | 151 | 10 | 25 | 267 | 2 | 261 | 2.19e-19 | 87.4 |
| Msa0215770 | MtrunA17_Chr7g0233521 | 26.715 | 277 | 152 | 11 | 25 | 267 | 2 | 261 | 3.05e-18 | 84.3 |
| Msa0215770 | MtrunA17_Chr1g0163221 | 26.045 | 311 | 188 | 10 | 9 | 285 | 11 | 313 | 6.65e-18 | 84.3 |
| Msa0215770 | MtrunA17_Chr7g0233541 | 26.335 | 281 | 165 | 9 | 25 | 267 | 2 | 278 | 1.38e-17 | 82.8 |
| Msa0215770 | MtrunA17_Chr1g0163121 | 34.286 | 140 | 67 | 5 | 23 | 145 | 9 | 140 | 8.66e-16 | 73.9 |
| Msa0215770 | MtrunA17_Chr5g0419201 | 31.765 | 170 | 98 | 4 | 4 | 155 | 11 | 180 | 2.29e-15 | 74.3 |
| Msa0215770 | MtrunA17_Chr1g0163141 | 31.288 | 163 | 71 | 5 | 23 | 145 | 9 | 170 | 3.21e-15 | 73.6 |
| Msa0215770 | MtrunA17_Chr6g0467351 | 34.932 | 146 | 77 | 4 | 9 | 140 | 15 | 156 | 7.45e-15 | 73.6 |
| Msa0215770 | MtrunA17_Chr6g0476181 | 35.065 | 154 | 66 | 7 | 25 | 145 | 2 | 154 | 8.69e-15 | 71.6 |
| Msa0215770 | MtrunA17_Chr3g0103181 | 21.951 | 287 | 182 | 10 | 6 | 267 | 9 | 278 | 1.11e-14 | 73.9 |
| Msa0215770 | MtrunA17_Chr7g0233571 | 27.485 | 171 | 113 | 4 | 6 | 165 | 7 | 177 | 1.82e-14 | 72.4 |
| Msa0215770 | MtrunA17_Chr3g0103171 | 22.711 | 273 | 169 | 9 | 24 | 267 | 5 | 264 | 1.50e-13 | 70.5 |
| Msa0215770 | MtrunA17_Chr1g0163081 | 39.326 | 89 | 42 | 2 | 25 | 102 | 6 | 93 | 1.56e-13 | 67.8 |
| Msa0215770 | MtrunA17_Chr3g0103191 | 23.786 | 206 | 135 | 4 | 6 | 191 | 9 | 212 | 2.42e-13 | 69.7 |
| Msa0215770 | MtrunA17_Chr3g0103151 | 27.778 | 144 | 82 | 4 | 6 | 135 | 9 | 144 | 6.35e-12 | 63.5 |
| Msa0215770 | MtrunA17_Chr1g0163061 | 37.647 | 85 | 50 | 2 | 9 | 90 | 15 | 99 | 8.28e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 64 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTGCAGATGACCCTTTA+AGG | 0.106528 | 2_1:-61186828 | None:intergenic |
| TCTATTGTGATGATAATATT+TGG | 0.179330 | 2_1:+61187171 | Msa0215770:CDS |
| GTGCTCAAAAGGAAATATTT+TGG | 0.198072 | 2_1:+61186033 | Msa0215770:CDS |
| TGCAGGTTGGCATAAATTTA+AGG | 0.202920 | 2_1:+61187887 | Msa0215770:CDS |
| TTACGCTCATGGCTATATTT+TGG | 0.211055 | 2_1:+61186570 | Msa0215770:CDS |
| AGAAATTTGTGGAGAAATAT+TGG | 0.241294 | 2_1:+61185970 | Msa0215770:CDS |
| ATGTTTGGTTTAAGAGAAAT+TGG | 0.245872 | 2_1:+61186072 | Msa0215770:CDS |
| TTTGGGAGTCTAAGAATTAC+TGG | 0.267570 | 2_1:-61186008 | None:intergenic |
| TATTTGAATGACAACCTTAA+AGG | 0.276541 | 2_1:+61186814 | Msa0215770:CDS |
| AGTCTAAGAATTACTGGATT+TGG | 0.299817 | 2_1:-61186002 | None:intergenic |
| ACTATCTTCAAGAACTCTTC+TGG | 0.314590 | 2_1:-61185680 | None:intergenic |
| ATATTTCTCCACAAATTTCT+TGG | 0.318034 | 2_1:-61185967 | None:intergenic |
| ACAAAGGAGGCATAATTAAG+AGG | 0.349731 | 2_1:+61186473 | Msa0215770:CDS |
| AACTTCACCTCCACTTTCAT+AGG | 0.353581 | 2_1:-61186871 | None:intergenic |
| ATTTGAATGACAACCTTAAA+GGG | 0.391511 | 2_1:+61186815 | Msa0215770:CDS |
| TATTTCTCCACAAATTTCTT+GGG | 0.405795 | 2_1:-61185966 | None:intergenic |
| TCATCTGCAAGCATTAGATT+TGG | 0.416468 | 2_1:+61186838 | Msa0215770:CDS |
| AAATTCGTGCAGTTCACAAA+TGG | 0.417597 | 2_1:+61187804 | Msa0215770:CDS |
| GAAGATTGCGGATTGAAGAT+TGG | 0.417689 | 2_1:+61187909 | Msa0215770:CDS |
| TTTGCAAAGTCTCTAAAAGA+TGG | 0.419454 | 2_1:+61186101 | Msa0215770:CDS |
| GACAATTCAAGTTCAAAACT+TGG | 0.430631 | 2_1:-61186541 | None:intergenic |
| AATTCGTGCAGTTCACAAAT+GGG | 0.433283 | 2_1:+61187805 | Msa0215770:CDS |
| GATTGGAGATACTTGCAAAC+TGG | 0.449776 | 2_1:+61187926 | Msa0215770:CDS |
| AGGAGCGTGAAGGTGATGTT+TGG | 0.450557 | 2_1:+61186057 | Msa0215770:CDS |
| GAACAATGACAAGGTTATGA+AGG | 0.451012 | 2_1:+61187143 | Msa0215770:intron |
| ACTCCCAAATGGTGCTCAAA+AGG | 0.455326 | 2_1:+61186022 | Msa0215770:CDS |
| GAGGGTTCCCAAGAAATTTG+TGG | 0.458170 | 2_1:+61185959 | Msa0215770:intron |
| ACACGAATCTCGATTGTGTT+CGG | 0.462954 | 2_1:-61187636 | None:intergenic |
| TTTGGCTTGGGTGATAGTTA+TGG | 0.473644 | 2_1:-61187022 | None:intergenic |
| ATGAGAATGAGAGAACTTGT+AGG | 0.473892 | 2_1:+61187859 | Msa0215770:CDS |
| TGTGTTTCAGCAGACTTAGA+AGG | 0.481816 | 2_1:+61187597 | Msa0215770:intron |
| TGTTTGGTTTAAGAGAAATT+GGG | 0.491470 | 2_1:+61186073 | Msa0215770:CDS |
| AGTACATACTCGAGAGATCA+TGG | 0.493016 | 2_1:-61187229 | None:intergenic |
| GATATTTGGTCACAATACAT+TGG | 0.502848 | 2_1:+61186172 | Msa0215770:CDS |
| AGAACTTGTAGGTTCTATGC+AGG | 0.508431 | 2_1:+61187870 | Msa0215770:CDS |
| CATAAATTTAAGGAAGATTG+CGG | 0.529511 | 2_1:+61187897 | Msa0215770:CDS |
| GAGGCATTGAAGGAAGTTCA+AGG | 0.529967 | 2_1:+61187201 | Msa0215770:CDS |
| CTTGTAGGTTCTATGCAGGT+TGG | 0.536785 | 2_1:+61187874 | Msa0215770:CDS |
| TTCATAGATGAAAGTTGTGA+AGG | 0.538273 | 2_1:+61186218 | Msa0215770:CDS |
| CAAAGGAGGCATAATTAAGA+GGG | 0.540734 | 2_1:+61186474 | Msa0215770:CDS |
| ATAGTTATGGTGAATGAAAG+TGG | 0.542900 | 2_1:-61187009 | None:intergenic |
| GTAATTCTTAGACTCCCAAA+TGG | 0.561023 | 2_1:+61186011 | Msa0215770:CDS |
| AGAACATGCATTGTGACCTC+TGG | 0.567004 | 2_1:+61186913 | Msa0215770:CDS |
| GATGGCAATGTTAATAGTGC+TGG | 0.575875 | 2_1:+61186275 | Msa0215770:CDS |
| CTTAGAAGGTGGTAATGTGA+TGG | 0.576917 | 2_1:+61187611 | Msa0215770:CDS |
| TTGTCACAATCTTACGCTCA+TGG | 0.577647 | 2_1:+61186559 | Msa0215770:CDS |
| AACTTTGCAGGTAAGAACAA+AGG | 0.579693 | 2_1:+61186457 | Msa0215770:intron |
| GGCAAATGGCTTCCAACCAG+AGG | 0.580163 | 2_1:-61186929 | None:intergenic |
| TATGCTCTTGAAAAGTCACT+TGG | 0.596669 | 2_1:-61186793 | None:intergenic |
| AAGAGACATAAAGAGTGTCA+TGG | 0.604494 | 2_1:+61187780 | Msa0215770:CDS |
| TGAGAACATGCCTATGAAAG+TGG | 0.608998 | 2_1:+61186861 | Msa0215770:CDS |
| TTCGTGCAGTTCACAAATGG+GGG | 0.622353 | 2_1:+61187807 | Msa0215770:CDS |
| ATTCGTGCAGTTCACAAATG+GGG | 0.622898 | 2_1:+61187806 | Msa0215770:CDS |
| GTTTCAGCAGACTTAGAAGG+TGG | 0.625758 | 2_1:+61187600 | Msa0215770:intron |
| ATAGTGCTGGCACATCTCAA+AGG | 0.625943 | 2_1:+61186288 | Msa0215770:CDS |
| CATGCATTGTGACCTCTGGT+TGG | 0.634224 | 2_1:+61186917 | Msa0215770:CDS |
| CATAAGTAATCCTACCGGGT+AGG | 0.638502 | 2_1:-61187667 | None:intergenic |
| ATAACTATCACCCAAGCCAA+AGG | 0.651162 | 2_1:+61187024 | Msa0215770:CDS |
| GCAGAACAAACAACTAGTGG+TGG | 0.662011 | 2_1:-61188001 | None:intergenic |
| TCGTGTGAACTCTACCTACC+CGG | 0.663506 | 2_1:+61187653 | Msa0215770:CDS |
| CAAAATCATGAACTACACAA+TGG | 0.670560 | 2_1:+61185704 | Msa0215770:CDS |
| GAAGTTGTTGAACTGAGTGA+TGG | 0.670925 | 2_1:+61186257 | Msa0215770:CDS |
| TTTGCAGGTAAGAACAAAGG+AGG | 0.676867 | 2_1:+61186460 | Msa0215770:intron |
| GAACATGCCTATGAAAGTGG+AGG | 0.736568 | 2_1:+61186864 | Msa0215770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATAAAATAAAATTACA+AGG | - | chr2_1:61186393-61186412 | None:intergenic | 10.0% |
| !!! | TGTAATTTTATTTTATTTTG+AGG | + | chr2_1:61186393-61186412 | Msa0215770:intron | 10.0% |
| !!! | TGTTCTAAATTATTATTTAT+TGG | + | chr2_1:61186651-61186670 | Msa0215770:intron | 10.0% |
| !!! | AAATAATTTGTAATATATGA+GGG | - | chr2_1:61187437-61187456 | None:intergenic | 10.0% |
| !!! | TAAATAATTTGTAATATATG+AGG | - | chr2_1:61187438-61187457 | None:intergenic | 10.0% |
| !! | ACAAATTATTTAATATTTCA+AGG | + | chr2_1:61187446-61187465 | Msa0215770:intron | 10.0% |
| !! | CAAAATAAAATAAAATTACA+AGG | - | chr2_1:61186393-61186412 | None:intergenic | 10.0% |
| !!! | TGTAATTTTATTTTATTTTG+AGG | + | chr2_1:61186393-61186412 | Msa0215770:intron | 10.0% |
| !!! | TGTTCTAAATTATTATTTAT+TGG | + | chr2_1:61186651-61186670 | Msa0215770:intron | 10.0% |
| !!! | AAATAATTTGTAATATATGA+GGG | - | chr2_1:61187437-61187456 | None:intergenic | 10.0% |
| !!! | TAAATAATTTGTAATATATG+AGG | - | chr2_1:61187438-61187457 | None:intergenic | 10.0% |
| !! | ACAAATTATTTAATATTTCA+AGG | + | chr2_1:61187446-61187465 | Msa0215770:intron | 10.0% |
| !! | GTTATTTAATTATAGTTGAA+AGG | - | chr2_1:61185838-61185857 | None:intergenic | 15.0% |
| !!! | ATTAATAACAAAAGTATAGT+TGG | - | chr2_1:61185864-61185883 | None:intergenic | 15.0% |
| !! | ATAAGTATAATTAATGCAAA+GGG | - | chr2_1:61185917-61185936 | None:intergenic | 15.0% |
| !! | ATATCTTAACCTTAAAATAT+GGG | - | chr2_1:61186157-61186176 | None:intergenic | 15.0% |
| !! | AATATCTTAACCTTAAAATA+TGG | - | chr2_1:61186158-61186177 | None:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | + | chr2_1:61186158-61186177 | Msa0215770:intron | 15.0% |
| !!! | TTCATCTATGAATTTTATAT+TGG | - | chr2_1:61186210-61186229 | None:intergenic | 15.0% |
| !!! | TAAGTATAATGTTTTATAGT+AGG | - | chr2_1:61186600-61186619 | None:intergenic | 15.0% |
| !!! | AACTTGTAAGTTATATTTTT+TGG | - | chr2_1:61186953-61186972 | None:intergenic | 15.0% |
| !! | AAAAAATATAACTTACAAGT+TGG | + | chr2_1:61186952-61186971 | Msa0215770:CDS | 15.0% |
| !!! | CTTTTTTAAATAAAGTATGA+AGG | - | chr2_1:61187055-61187074 | None:intergenic | 15.0% |
| !!! | GTTTAAATTTTTTAGAGAAT+AGG | + | chr2_1:61187253-61187272 | Msa0215770:intron | 15.0% |
| !!! | CTTTTCAAAAAATTATAACT+AGG | + | chr2_1:61187309-61187328 | Msa0215770:intron | 15.0% |
| !!! | ATAAAATTTAAAACAGAACT+TGG | - | chr2_1:61187377-61187396 | None:intergenic | 15.0% |
| !!! | CTTGAACTAATATTTTTAAT+TGG | - | chr2_1:61187474-61187493 | None:intergenic | 15.0% |
| !! | GTTATTTAATTATAGTTGAA+AGG | - | chr2_1:61185838-61185857 | None:intergenic | 15.0% |
| !!! | ATTAATAACAAAAGTATAGT+TGG | - | chr2_1:61185864-61185883 | None:intergenic | 15.0% |
| !! | ATAAGTATAATTAATGCAAA+GGG | - | chr2_1:61185917-61185936 | None:intergenic | 15.0% |
| !! | ATATCTTAACCTTAAAATAT+GGG | - | chr2_1:61186157-61186176 | None:intergenic | 15.0% |
| !! | AATATCTTAACCTTAAAATA+TGG | - | chr2_1:61186158-61186177 | None:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | + | chr2_1:61186158-61186177 | Msa0215770:intron | 15.0% |
| !!! | TTCATCTATGAATTTTATAT+TGG | - | chr2_1:61186210-61186229 | None:intergenic | 15.0% |
| !!! | TAAGTATAATGTTTTATAGT+AGG | - | chr2_1:61186600-61186619 | None:intergenic | 15.0% |
| !!! | AACTTGTAAGTTATATTTTT+TGG | - | chr2_1:61186953-61186972 | None:intergenic | 15.0% |
| !! | AAAAAATATAACTTACAAGT+TGG | + | chr2_1:61186952-61186971 | Msa0215770:CDS | 15.0% |
| !!! | CTTTTTTAAATAAAGTATGA+AGG | - | chr2_1:61187055-61187074 | None:intergenic | 15.0% |
| !!! | GTTTAAATTTTTTAGAGAAT+AGG | + | chr2_1:61187253-61187272 | Msa0215770:intron | 15.0% |
| !!! | CTTTTCAAAAAATTATAACT+AGG | + | chr2_1:61187309-61187328 | Msa0215770:intron | 15.0% |
| !!! | ATAAAATTTAAAACAGAACT+TGG | - | chr2_1:61187377-61187396 | None:intergenic | 15.0% |
| !!! | CTTGAACTAATATTTTTAAT+TGG | - | chr2_1:61187474-61187493 | None:intergenic | 15.0% |
| !! | GATAAGTATAATTAATGCAA+AGG | - | chr2_1:61185918-61185937 | None:intergenic | 20.0% |
| !!! | GCTTTAGTTTTCAAATATTT+AGG | + | chr2_1:61186128-61186147 | Msa0215770:intron | 20.0% |
| !!! | TTAGTTTTCAAATATTTAGG+TGG | + | chr2_1:61186131-61186150 | Msa0215770:intron | 20.0% |
| !!! | ATCTATTTTAGCCATTTATA+AGG | - | chr2_1:61186426-61186445 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTTTAACTTTGC+AGG | + | chr2_1:61186445-61186464 | Msa0215770:intron | 20.0% |
| !!! | AACAAAGTTACTAGTAATTT+TGG | + | chr2_1:61186725-61186744 | Msa0215770:intron | 20.0% |
| !!! | AAGTTATATTTTTTGGCAAA+TGG | - | chr2_1:61186946-61186965 | None:intergenic | 20.0% |
| !! | CAATTGATATTAAGCAAATT+TGG | - | chr2_1:61187105-61187124 | None:intergenic | 20.0% |
| !! | TCTATTGTGATGATAATATT+TGG | + | chr2_1:61187171-61187190 | Msa0215770:CDS | 20.0% |
| !! | GATAATATTTGGAAAAAAAG+AGG | + | chr2_1:61187182-61187201 | Msa0215770:CDS | 20.0% |
| !! | GATAAGTATAATTAATGCAA+AGG | - | chr2_1:61185918-61185937 | None:intergenic | 20.0% |
| !!! | GCTTTAGTTTTCAAATATTT+AGG | + | chr2_1:61186128-61186147 | Msa0215770:intron | 20.0% |
| !!! | TTAGTTTTCAAATATTTAGG+TGG | + | chr2_1:61186131-61186150 | Msa0215770:intron | 20.0% |
| !!! | ATCTATTTTAGCCATTTATA+AGG | - | chr2_1:61186426-61186445 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTTTAACTTTGC+AGG | + | chr2_1:61186445-61186464 | Msa0215770:intron | 20.0% |
| !!! | AACAAAGTTACTAGTAATTT+TGG | + | chr2_1:61186725-61186744 | Msa0215770:intron | 20.0% |
| !!! | AAGTTATATTTTTTGGCAAA+TGG | - | chr2_1:61186946-61186965 | None:intergenic | 20.0% |
| !! | CAATTGATATTAAGCAAATT+TGG | - | chr2_1:61187105-61187124 | None:intergenic | 20.0% |
| !! | TCTATTGTGATGATAATATT+TGG | + | chr2_1:61187171-61187190 | Msa0215770:CDS | 20.0% |
| !! | GATAATATTTGGAAAAAAAG+AGG | + | chr2_1:61187182-61187201 | Msa0215770:CDS | 20.0% |
| ! | CTGAAACAGATAATCATTTA+TGG | - | chr2_1:61185940-61185959 | None:intergenic | 25.0% |
| ! | TAAATGATTATCTGTTTCAG+AGG | + | chr2_1:61185940-61185959 | Msa0215770:intron | 25.0% |
| ! | AAATGATTATCTGTTTCAGA+GGG | + | chr2_1:61185941-61185960 | Msa0215770:intron | 25.0% |
| ! | TATTTCTCCACAAATTTCTT+GGG | - | chr2_1:61185969-61185988 | None:intergenic | 25.0% |
| ! | ATATTTCTCCACAAATTTCT+TGG | - | chr2_1:61185970-61185989 | None:intergenic | 25.0% |
| ! | AGAAATTTGTGGAGAAATAT+TGG | + | chr2_1:61185970-61185989 | Msa0215770:CDS | 25.0% |
| !! | TGCTCAAAAGGAAATATTTT+GGG | + | chr2_1:61186034-61186053 | Msa0215770:CDS | 25.0% |
| !! | ATGTTTGGTTTAAGAGAAAT+TGG | + | chr2_1:61186072-61186091 | Msa0215770:CDS | 25.0% |
| !! | TGTTTGGTTTAAGAGAAATT+GGG | + | chr2_1:61186073-61186092 | Msa0215770:CDS | 25.0% |
| ! | ATTAATCAGCAAAAAATCTC+TGG | + | chr2_1:61186332-61186351 | Msa0215770:CDS | 25.0% |
| ! | TAAACCTTGAATTGAAATAG+AGG | + | chr2_1:61186767-61186786 | Msa0215770:intron | 25.0% |
| ! | TATTTGAATGACAACCTTAA+AGG | + | chr2_1:61186814-61186833 | Msa0215770:CDS | 25.0% |
| ! | ATTTGAATGACAACCTTAAA+GGG | + | chr2_1:61186815-61186834 | Msa0215770:CDS | 25.0% |
| !! | TAACTAGGTTTTCTTACTTT+AGG | + | chr2_1:61187324-61187343 | Msa0215770:intron | 25.0% |
| ! | TTTAACATAAGTAATCCTAC+CGG | - | chr2_1:61187675-61187694 | None:intergenic | 25.0% |
| ! | AGGATTACTTATGTTAAATG+TGG | + | chr2_1:61187677-61187696 | Msa0215770:intron | 25.0% |
| !! | TCATAATATTGCACTTTTAC+AGG | - | chr2_1:61187843-61187862 | None:intergenic | 25.0% |
| ! | CATAAATTTAAGGAAGATTG+CGG | + | chr2_1:61187897-61187916 | Msa0215770:CDS | 25.0% |
| ! | CTGAAACAGATAATCATTTA+TGG | - | chr2_1:61185940-61185959 | None:intergenic | 25.0% |
| ! | TAAATGATTATCTGTTTCAG+AGG | + | chr2_1:61185940-61185959 | Msa0215770:intron | 25.0% |
| ! | AAATGATTATCTGTTTCAGA+GGG | + | chr2_1:61185941-61185960 | Msa0215770:intron | 25.0% |
| ! | TATTTCTCCACAAATTTCTT+GGG | - | chr2_1:61185969-61185988 | None:intergenic | 25.0% |
| ! | ATATTTCTCCACAAATTTCT+TGG | - | chr2_1:61185970-61185989 | None:intergenic | 25.0% |
| ! | AGAAATTTGTGGAGAAATAT+TGG | + | chr2_1:61185970-61185989 | Msa0215770:CDS | 25.0% |
| !! | TGCTCAAAAGGAAATATTTT+GGG | + | chr2_1:61186034-61186053 | Msa0215770:CDS | 25.0% |
| !! | ATGTTTGGTTTAAGAGAAAT+TGG | + | chr2_1:61186072-61186091 | Msa0215770:CDS | 25.0% |
| !! | TGTTTGGTTTAAGAGAAATT+GGG | + | chr2_1:61186073-61186092 | Msa0215770:CDS | 25.0% |
| ! | ATTAATCAGCAAAAAATCTC+TGG | + | chr2_1:61186332-61186351 | Msa0215770:CDS | 25.0% |
| ! | TAAACCTTGAATTGAAATAG+AGG | + | chr2_1:61186767-61186786 | Msa0215770:intron | 25.0% |
| ! | TATTTGAATGACAACCTTAA+AGG | + | chr2_1:61186814-61186833 | Msa0215770:CDS | 25.0% |
| ! | ATTTGAATGACAACCTTAAA+GGG | + | chr2_1:61186815-61186834 | Msa0215770:CDS | 25.0% |
| !! | TAACTAGGTTTTCTTACTTT+AGG | + | chr2_1:61187324-61187343 | Msa0215770:intron | 25.0% |
| ! | TTTAACATAAGTAATCCTAC+CGG | - | chr2_1:61187675-61187694 | None:intergenic | 25.0% |
| ! | AGGATTACTTATGTTAAATG+TGG | + | chr2_1:61187677-61187696 | Msa0215770:intron | 25.0% |
| !! | TCATAATATTGCACTTTTAC+AGG | - | chr2_1:61187843-61187862 | None:intergenic | 25.0% |
| ! | CATAAATTTAAGGAAGATTG+CGG | + | chr2_1:61187897-61187916 | Msa0215770:CDS | 25.0% |
| CAAAATCATGAACTACACAA+TGG | + | chr2_1:61185704-61185723 | Msa0215770:CDS | 30.0% | |
| AGTCTAAGAATTACTGGATT+TGG | - | chr2_1:61186005-61186024 | None:intergenic | 30.0% | |
| ! | GTGCTCAAAAGGAAATATTT+TGG | + | chr2_1:61186033-61186052 | Msa0215770:CDS | 30.0% |
| !! | TCAAAAGGAAATATTTTGGG+AGG | + | chr2_1:61186037-61186056 | Msa0215770:CDS | 30.0% |
| ! | TTTGCAAAGTCTCTAAAAGA+TGG | + | chr2_1:61186101-61186120 | Msa0215770:CDS | 30.0% |
| GATATTTGGTCACAATACAT+TGG | + | chr2_1:61186172-61186191 | Msa0215770:CDS | 30.0% | |
| TTCATAGATGAAAGTTGTGA+AGG | + | chr2_1:61186218-61186237 | Msa0215770:CDS | 30.0% | |
| ! | GAGGTATTCTACCTTATAAA+TGG | + | chr2_1:61186412-61186431 | Msa0215770:intron | 30.0% |
| ! | GACAATTCAAGTTCAAAACT+TGG | - | chr2_1:61186544-61186563 | None:intergenic | 30.0% |
| GTATCCTCTATTTCAATTCA+AGG | - | chr2_1:61186774-61186793 | None:intergenic | 30.0% | |
| ATAGTTATGGTGAATGAAAG+TGG | - | chr2_1:61187012-61187031 | None:intergenic | 30.0% | |
| AAGTATGAAGGAAAAACCTT+TGG | - | chr2_1:61187043-61187062 | None:intergenic | 30.0% | |
| TTGTCATTGTTCAAAGGAAT+TGG | - | chr2_1:61187135-61187154 | None:intergenic | 30.0% | |
| AATTCCTTTGAACAATGACA+AGG | + | chr2_1:61187134-61187153 | Msa0215770:intron | 30.0% | |
| ATAACCTTGTCATTGTTCAA+AGG | - | chr2_1:61187141-61187160 | None:intergenic | 30.0% | |
| ATTTGTAATATATGAGGGAG+AGG | - | chr2_1:61187432-61187451 | None:intergenic | 30.0% | |
| TTAACATAAGTAATCCTACC+GGG | - | chr2_1:61187674-61187693 | None:intergenic | 30.0% | |
| CAAAATCATGAACTACACAA+TGG | + | chr2_1:61185704-61185723 | Msa0215770:CDS | 30.0% | |
| AGTCTAAGAATTACTGGATT+TGG | - | chr2_1:61186005-61186024 | None:intergenic | 30.0% | |
| ! | GTGCTCAAAAGGAAATATTT+TGG | + | chr2_1:61186033-61186052 | Msa0215770:CDS | 30.0% |
| !! | TCAAAAGGAAATATTTTGGG+AGG | + | chr2_1:61186037-61186056 | Msa0215770:CDS | 30.0% |
| ! | TTTGCAAAGTCTCTAAAAGA+TGG | + | chr2_1:61186101-61186120 | Msa0215770:CDS | 30.0% |
| GATATTTGGTCACAATACAT+TGG | + | chr2_1:61186172-61186191 | Msa0215770:CDS | 30.0% | |
| TTCATAGATGAAAGTTGTGA+AGG | + | chr2_1:61186218-61186237 | Msa0215770:CDS | 30.0% | |
| ! | GAGGTATTCTACCTTATAAA+TGG | + | chr2_1:61186412-61186431 | Msa0215770:intron | 30.0% |
| ! | GACAATTCAAGTTCAAAACT+TGG | - | chr2_1:61186544-61186563 | None:intergenic | 30.0% |
| GTATCCTCTATTTCAATTCA+AGG | - | chr2_1:61186774-61186793 | None:intergenic | 30.0% | |
| ATAGTTATGGTGAATGAAAG+TGG | - | chr2_1:61187012-61187031 | None:intergenic | 30.0% | |
| AAGTATGAAGGAAAAACCTT+TGG | - | chr2_1:61187043-61187062 | None:intergenic | 30.0% | |
| TTGTCATTGTTCAAAGGAAT+TGG | - | chr2_1:61187135-61187154 | None:intergenic | 30.0% | |
| AATTCCTTTGAACAATGACA+AGG | + | chr2_1:61187134-61187153 | Msa0215770:intron | 30.0% | |
| ATAACCTTGTCATTGTTCAA+AGG | - | chr2_1:61187141-61187160 | None:intergenic | 30.0% | |
| ATTTGTAATATATGAGGGAG+AGG | - | chr2_1:61187432-61187451 | None:intergenic | 30.0% | |
| TTAACATAAGTAATCCTACC+GGG | - | chr2_1:61187674-61187693 | None:intergenic | 30.0% | |
| ACTATCTTCAAGAACTCTTC+TGG | - | chr2_1:61185683-61185702 | None:intergenic | 35.0% | |
| TTTGGGAGTCTAAGAATTAC+TGG | - | chr2_1:61186011-61186030 | None:intergenic | 35.0% | |
| GTAATTCTTAGACTCCCAAA+TGG | + | chr2_1:61186011-61186030 | Msa0215770:CDS | 35.0% | |
| ! | TTTCCTTTTGAGCACCATTT+GGG | - | chr2_1:61186028-61186047 | None:intergenic | 35.0% |
| ! | ATTTCCTTTTGAGCACCATT+TGG | - | chr2_1:61186029-61186048 | None:intergenic | 35.0% |
| ! | TTTAGGTGGCCCATATTTTA+AGG | + | chr2_1:61186145-61186164 | Msa0215770:intron | 35.0% |
| ACATCTCAAAGGAGAAAAAG+TGG | + | chr2_1:61186299-61186318 | Msa0215770:CDS | 35.0% | |
| AACTTTGCAGGTAAGAACAA+AGG | + | chr2_1:61186457-61186476 | Msa0215770:intron | 35.0% | |
| ! | ACAAAGGAGGCATAATTAAG+AGG | + | chr2_1:61186473-61186492 | Msa0215770:CDS | 35.0% |
| ! | CAAAGGAGGCATAATTAAGA+GGG | + | chr2_1:61186474-61186493 | Msa0215770:CDS | 35.0% |
| ! | TTACGCTCATGGCTATATTT+TGG | + | chr2_1:61186570-61186589 | Msa0215770:CDS | 35.0% |
| TATGCTCTTGAAAAGTCACT+TGG | - | chr2_1:61186796-61186815 | None:intergenic | 35.0% | |
| TCATCTGCAAGCATTAGATT+TGG | + | chr2_1:61186838-61186857 | Msa0215770:CDS | 35.0% | |
| GAACAATGACAAGGTTATGA+AGG | + | chr2_1:61187143-61187162 | Msa0215770:intron | 35.0% | |
| !! | TGGAAAAAAAGAGGCATTGA+AGG | + | chr2_1:61187191-61187210 | Msa0215770:CDS | 35.0% |
| !! | AAGAGACATAAAGAGTGTCA+TGG | + | chr2_1:61187780-61187799 | Msa0215770:CDS | 35.0% |
| AAATTCGTGCAGTTCACAAA+TGG | + | chr2_1:61187804-61187823 | Msa0215770:CDS | 35.0% | |
| AATTCGTGCAGTTCACAAAT+GGG | + | chr2_1:61187805-61187824 | Msa0215770:CDS | 35.0% | |
| ATGAGAATGAGAGAACTTGT+AGG | + | chr2_1:61187859-61187878 | Msa0215770:CDS | 35.0% | |
| ! | TGCAGGTTGGCATAAATTTA+AGG | + | chr2_1:61187887-61187906 | Msa0215770:CDS | 35.0% |
| ACTATCTTCAAGAACTCTTC+TGG | - | chr2_1:61185683-61185702 | None:intergenic | 35.0% | |
| TTTGGGAGTCTAAGAATTAC+TGG | - | chr2_1:61186011-61186030 | None:intergenic | 35.0% | |
| GTAATTCTTAGACTCCCAAA+TGG | + | chr2_1:61186011-61186030 | Msa0215770:CDS | 35.0% | |
| ! | TTTCCTTTTGAGCACCATTT+GGG | - | chr2_1:61186028-61186047 | None:intergenic | 35.0% |
| ! | ATTTCCTTTTGAGCACCATT+TGG | - | chr2_1:61186029-61186048 | None:intergenic | 35.0% |
| ! | TTTAGGTGGCCCATATTTTA+AGG | + | chr2_1:61186145-61186164 | Msa0215770:intron | 35.0% |
| ACATCTCAAAGGAGAAAAAG+TGG | + | chr2_1:61186299-61186318 | Msa0215770:CDS | 35.0% | |
| AACTTTGCAGGTAAGAACAA+AGG | + | chr2_1:61186457-61186476 | Msa0215770:intron | 35.0% | |
| ! | ACAAAGGAGGCATAATTAAG+AGG | + | chr2_1:61186473-61186492 | Msa0215770:CDS | 35.0% |
| ! | CAAAGGAGGCATAATTAAGA+GGG | + | chr2_1:61186474-61186493 | Msa0215770:CDS | 35.0% |
| ! | TTACGCTCATGGCTATATTT+TGG | + | chr2_1:61186570-61186589 | Msa0215770:CDS | 35.0% |
| TATGCTCTTGAAAAGTCACT+TGG | - | chr2_1:61186796-61186815 | None:intergenic | 35.0% | |
| TCATCTGCAAGCATTAGATT+TGG | + | chr2_1:61186838-61186857 | Msa0215770:CDS | 35.0% | |
| GAACAATGACAAGGTTATGA+AGG | + | chr2_1:61187143-61187162 | Msa0215770:intron | 35.0% | |
| !! | TGGAAAAAAAGAGGCATTGA+AGG | + | chr2_1:61187191-61187210 | Msa0215770:CDS | 35.0% |
| !! | AAGAGACATAAAGAGTGTCA+TGG | + | chr2_1:61187780-61187799 | Msa0215770:CDS | 35.0% |
| AAATTCGTGCAGTTCACAAA+TGG | + | chr2_1:61187804-61187823 | Msa0215770:CDS | 35.0% | |
| AATTCGTGCAGTTCACAAAT+GGG | + | chr2_1:61187805-61187824 | Msa0215770:CDS | 35.0% | |
| ATGAGAATGAGAGAACTTGT+AGG | + | chr2_1:61187859-61187878 | Msa0215770:CDS | 35.0% | |
| ! | TGCAGGTTGGCATAAATTTA+AGG | + | chr2_1:61187887-61187906 | Msa0215770:CDS | 35.0% |
| GAAGTTGTTGAACTGAGTGA+TGG | + | chr2_1:61186257-61186276 | Msa0215770:CDS | 40.0% | |
| GATGGCAATGTTAATAGTGC+TGG | + | chr2_1:61186275-61186294 | Msa0215770:CDS | 40.0% | |
| TTTGCAGGTAAGAACAAAGG+AGG | + | chr2_1:61186460-61186479 | Msa0215770:intron | 40.0% | |
| TTGTCACAATCTTACGCTCA+TGG | + | chr2_1:61186559-61186578 | Msa0215770:CDS | 40.0% | |
| TGAGAACATGCCTATGAAAG+TGG | + | chr2_1:61186861-61186880 | Msa0215770:CDS | 40.0% | |
| AACTTCACCTCCACTTTCAT+AGG | - | chr2_1:61186874-61186893 | None:intergenic | 40.0% | |
| !! | TTTGGCTTGGGTGATAGTTA+TGG | - | chr2_1:61187025-61187044 | None:intergenic | 40.0% |
| ATAACTATCACCCAAGCCAA+AGG | + | chr2_1:61187024-61187043 | Msa0215770:CDS | 40.0% | |
| ! | GAAGGAAAAACCTTTGGCTT+GGG | - | chr2_1:61187037-61187056 | None:intergenic | 40.0% |
| TGAAGGAAAAACCTTTGGCT+TGG | - | chr2_1:61187038-61187057 | None:intergenic | 40.0% | |
| AGTACATACTCGAGAGATCA+TGG | - | chr2_1:61187232-61187251 | None:intergenic | 40.0% | |
| TGTGTTTCAGCAGACTTAGA+AGG | + | chr2_1:61187597-61187616 | Msa0215770:intron | 40.0% | |
| ! | CTTAGAAGGTGGTAATGTGA+TGG | + | chr2_1:61187611-61187630 | Msa0215770:CDS | 40.0% |
| ACACGAATCTCGATTGTGTT+CGG | - | chr2_1:61187639-61187658 | None:intergenic | 40.0% | |
| ATTCGTGCAGTTCACAAATG+GGG | + | chr2_1:61187806-61187825 | Msa0215770:CDS | 40.0% | |
| TCACAAATGGGGGAAAATCA+TGG | + | chr2_1:61187817-61187836 | Msa0215770:CDS | 40.0% | |
| AGAACTTGTAGGTTCTATGC+AGG | + | chr2_1:61187870-61187889 | Msa0215770:CDS | 40.0% | |
| ! | GAAGATTGCGGATTGAAGAT+TGG | + | chr2_1:61187909-61187928 | Msa0215770:CDS | 40.0% |
| GATTGGAGATACTTGCAAAC+TGG | + | chr2_1:61187926-61187945 | Msa0215770:CDS | 40.0% | |
| GAAGTTGTTGAACTGAGTGA+TGG | + | chr2_1:61186257-61186276 | Msa0215770:CDS | 40.0% | |
| GATGGCAATGTTAATAGTGC+TGG | + | chr2_1:61186275-61186294 | Msa0215770:CDS | 40.0% | |
| TTTGCAGGTAAGAACAAAGG+AGG | + | chr2_1:61186460-61186479 | Msa0215770:intron | 40.0% | |
| TTGTCACAATCTTACGCTCA+TGG | + | chr2_1:61186559-61186578 | Msa0215770:CDS | 40.0% | |
| TGAGAACATGCCTATGAAAG+TGG | + | chr2_1:61186861-61186880 | Msa0215770:CDS | 40.0% | |
| AACTTCACCTCCACTTTCAT+AGG | - | chr2_1:61186874-61186893 | None:intergenic | 40.0% | |
| !! | TTTGGCTTGGGTGATAGTTA+TGG | - | chr2_1:61187025-61187044 | None:intergenic | 40.0% |
| ATAACTATCACCCAAGCCAA+AGG | + | chr2_1:61187024-61187043 | Msa0215770:CDS | 40.0% | |
| ! | GAAGGAAAAACCTTTGGCTT+GGG | - | chr2_1:61187037-61187056 | None:intergenic | 40.0% |
| TGAAGGAAAAACCTTTGGCT+TGG | - | chr2_1:61187038-61187057 | None:intergenic | 40.0% | |
| AGTACATACTCGAGAGATCA+TGG | - | chr2_1:61187232-61187251 | None:intergenic | 40.0% | |
| TGTGTTTCAGCAGACTTAGA+AGG | + | chr2_1:61187597-61187616 | Msa0215770:intron | 40.0% | |
| ! | CTTAGAAGGTGGTAATGTGA+TGG | + | chr2_1:61187611-61187630 | Msa0215770:CDS | 40.0% |
| ACACGAATCTCGATTGTGTT+CGG | - | chr2_1:61187639-61187658 | None:intergenic | 40.0% | |
| ATTCGTGCAGTTCACAAATG+GGG | + | chr2_1:61187806-61187825 | Msa0215770:CDS | 40.0% | |
| TCACAAATGGGGGAAAATCA+TGG | + | chr2_1:61187817-61187836 | Msa0215770:CDS | 40.0% | |
| AGAACTTGTAGGTTCTATGC+AGG | + | chr2_1:61187870-61187889 | Msa0215770:CDS | 40.0% | |
| ! | GAAGATTGCGGATTGAAGAT+TGG | + | chr2_1:61187909-61187928 | Msa0215770:CDS | 40.0% |
| GATTGGAGATACTTGCAAAC+TGG | + | chr2_1:61187926-61187945 | Msa0215770:CDS | 40.0% | |
| GAGGGTTCCCAAGAAATTTG+TGG | + | chr2_1:61185959-61185978 | Msa0215770:intron | 45.0% | |
| ACTCCCAAATGGTGCTCAAA+AGG | + | chr2_1:61186022-61186041 | Msa0215770:CDS | 45.0% | |
| !! | ATATTTTGGGAGGAGCGTGA+AGG | + | chr2_1:61186047-61186066 | Msa0215770:CDS | 45.0% |
| !! | ATAGTGCTGGCACATCTCAA+AGG | + | chr2_1:61186288-61186307 | Msa0215770:CDS | 45.0% |
| TGCTTGCAGATGACCCTTTA+AGG | - | chr2_1:61186831-61186850 | None:intergenic | 45.0% | |
| GAACATGCCTATGAAAGTGG+AGG | + | chr2_1:61186864-61186883 | Msa0215770:CDS | 45.0% | |
| AGAACATGCATTGTGACCTC+TGG | + | chr2_1:61186913-61186932 | Msa0215770:CDS | 45.0% | |
| !! | GAGGCATTGAAGGAAGTTCA+AGG | + | chr2_1:61187201-61187220 | Msa0215770:CDS | 45.0% |
| GTTTCAGCAGACTTAGAAGG+TGG | + | chr2_1:61187600-61187619 | Msa0215770:intron | 45.0% | |
| CATAAGTAATCCTACCGGGT+AGG | - | chr2_1:61187670-61187689 | None:intergenic | 45.0% | |
| TTCGTGCAGTTCACAAATGG+GGG | + | chr2_1:61187807-61187826 | Msa0215770:CDS | 45.0% | |
| CTTGTAGGTTCTATGCAGGT+TGG | + | chr2_1:61187874-61187893 | Msa0215770:CDS | 45.0% | |
| GAGGGTTCCCAAGAAATTTG+TGG | + | chr2_1:61185959-61185978 | Msa0215770:intron | 45.0% | |
| ACTCCCAAATGGTGCTCAAA+AGG | + | chr2_1:61186022-61186041 | Msa0215770:CDS | 45.0% | |
| !! | ATATTTTGGGAGGAGCGTGA+AGG | + | chr2_1:61186047-61186066 | Msa0215770:CDS | 45.0% |
| !! | ATAGTGCTGGCACATCTCAA+AGG | + | chr2_1:61186288-61186307 | Msa0215770:CDS | 45.0% |
| TGCTTGCAGATGACCCTTTA+AGG | - | chr2_1:61186831-61186850 | None:intergenic | 45.0% | |
| GAACATGCCTATGAAAGTGG+AGG | + | chr2_1:61186864-61186883 | Msa0215770:CDS | 45.0% | |
| AGAACATGCATTGTGACCTC+TGG | + | chr2_1:61186913-61186932 | Msa0215770:CDS | 45.0% | |
| !! | GAGGCATTGAAGGAAGTTCA+AGG | + | chr2_1:61187201-61187220 | Msa0215770:CDS | 45.0% |
| GTTTCAGCAGACTTAGAAGG+TGG | + | chr2_1:61187600-61187619 | Msa0215770:intron | 45.0% | |
| CATAAGTAATCCTACCGGGT+AGG | - | chr2_1:61187670-61187689 | None:intergenic | 45.0% | |
| TTCGTGCAGTTCACAAATGG+GGG | + | chr2_1:61187807-61187826 | Msa0215770:CDS | 45.0% | |
| CTTGTAGGTTCTATGCAGGT+TGG | + | chr2_1:61187874-61187893 | Msa0215770:CDS | 45.0% | |
| ! | AGGAGCGTGAAGGTGATGTT+TGG | + | chr2_1:61186057-61186076 | Msa0215770:CDS | 50.0% |
| CATGCATTGTGACCTCTGGT+TGG | + | chr2_1:61186917-61186936 | Msa0215770:CDS | 50.0% | |
| TCGTGTGAACTCTACCTACC+CGG | + | chr2_1:61187653-61187672 | Msa0215770:CDS | 50.0% | |
| ! | AGGAGCGTGAAGGTGATGTT+TGG | + | chr2_1:61186057-61186076 | Msa0215770:CDS | 50.0% |
| CATGCATTGTGACCTCTGGT+TGG | + | chr2_1:61186917-61186936 | Msa0215770:CDS | 50.0% | |
| TCGTGTGAACTCTACCTACC+CGG | + | chr2_1:61187653-61187672 | Msa0215770:CDS | 50.0% | |
| GGCAAATGGCTTCCAACCAG+AGG | - | chr2_1:61186932-61186951 | None:intergenic | 55.0% | |
| GTGAACTCTACCTACCCGGT+AGG | + | chr2_1:61187657-61187676 | Msa0215770:intron | 55.0% | |
| GGCAAATGGCTTCCAACCAG+AGG | - | chr2_1:61186932-61186951 | None:intergenic | 55.0% | |
| GTGAACTCTACCTACCCGGT+AGG | + | chr2_1:61187657-61187676 | Msa0215770:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 61185665 | 61188010 | 61185665 | ID=Msa0215770;Name=Msa0215770 |
| chr2_1 | mRNA | 61185665 | 61188010 | 61185665 | ID=Msa0215770-mRNA-1;Parent=Msa0215770;Name=Msa0215770-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|0.57|0.5|8|0|405 |
| chr2_1 | exon | 61185665 | 61185733 | 61185665 | ID=Msa0215770-mRNA-1:exon:16841;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61185960 | 61186133 | 61185960 | ID=Msa0215770-mRNA-1:exon:16842;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61186167 | 61186353 | 61186167 | ID=Msa0215770-mRNA-1:exon:16843;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61186467 | 61186591 | 61186467 | ID=Msa0215770-mRNA-1:exon:16844;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61186787 | 61187045 | 61186787 | ID=Msa0215770-mRNA-1:exon:16845;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61187156 | 61187242 | 61187156 | ID=Msa0215770-mRNA-1:exon:16846;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61187610 | 61187674 | 61187610 | ID=Msa0215770-mRNA-1:exon:16847;Parent=Msa0215770-mRNA-1 |
| chr2_1 | exon | 61187759 | 61188010 | 61187759 | ID=Msa0215770-mRNA-1:exon:16848;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61185665 | 61185733 | 61185665 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61185960 | 61186133 | 61185960 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61186167 | 61186353 | 61186167 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61186467 | 61186591 | 61186467 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61186787 | 61187045 | 61186787 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61187156 | 61187242 | 61187156 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61187610 | 61187674 | 61187610 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| chr2_1 | CDS | 61187759 | 61188010 | 61187759 | ID=Msa0215770-mRNA-1:cds;Parent=Msa0215770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
