AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0218390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218390 MtrunA17_Chr2g0320521 61.728 243 69 3 117 347 2 232 3.28e-94 280
Msa0218390 MtrunA17_Chr2g0320521 59.302 86 33 1 6 91 110 193 3.42e-21 90.9
Msa0218390 MtrunA17_Chr2g0320561 56.627 249 83 3 118 347 1 243 1.53e-84 256
Msa0218390 MtrunA17_Chr2g0320561 85.088 114 17 0 3 116 105 218 9.48e-48 161
Msa0218390 MtrunA17_Chr4g0020811 76.336 131 31 0 117 247 2 132 2.76e-70 216
Msa0218390 MtrunA17_Chr2g0308401 75.385 130 32 0 118 247 1 130 1.13e-68 212
Msa0218390 MtrunA17_Chr2g0320551 66.142 127 43 0 118 244 1 127 1.09e-56 182
Msa0218390 MtrunA17_Chr2g0320551 67.347 49 16 0 2 50 104 152 8.59e-16 74.3
Msa0218390 MtrunA17_Chr1g0179781 39.565 230 105 9 117 344 2 199 3.99e-39 137
Msa0218390 MtrunA17_Chr5g0411151 34.661 251 114 9 104 346 22 230 2.66e-35 129
Msa0218390 MtrunA17_Chr4g0040071 35.808 229 107 8 122 346 16 208 5.09e-35 127
Msa0218390 MtrunA17_Chr5g0395181 35.526 228 102 7 122 346 22 207 6.94e-35 127
Msa0218390 MtrunA17_Chr7g0265291 37.991 229 108 9 118 344 4 200 9.84e-34 123
Msa0218390 MtrunA17_Chr8g0366581 33.198 247 116 9 107 346 24 228 1.39e-30 116
Msa0218390 MtrunA17_Chr7g0230511 39.683 126 63 6 120 244 7 120 2.68e-18 83.2
Msa0218390 MtrunA17_Chr4g0065041 29.412 255 136 11 123 346 10 251 1.63e-17 80.9
Msa0218390 MtrunA17_Chr2g0297251 28.571 245 128 10 123 346 39 257 7.43e-16 76.3
Msa0218390 MtrunA17_Chr8g0392151 35.000 100 55 4 123 222 15 104 6.56e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218390 AT1G43000.1 34.764 233 124 9 117 344 5 214 2.16e-35 129
Msa0218390 AT1G43000.2 34.764 233 124 9 117 344 12 221 2.20e-35 129
Msa0218390 AT4G17900.1 32.707 266 122 9 95 346 4 226 2.53e-33 123
Msa0218390 AT4G17900.2 34.783 230 107 7 122 346 21 212 3.48e-33 122
Msa0218390 AT1G21000.1 34.818 247 128 11 117 344 12 244 4.20e-33 123
Msa0218390 AT1G21000.2 34.818 247 128 11 117 344 9 241 4.29e-33 123
Msa0218390 AT1G32700.1 47.541 122 54 3 123 244 14 125 1.13e-29 113
Msa0218390 AT2G27930.1 46.825 126 61 3 123 245 6 128 7.80e-29 110
Msa0218390 AT2G27930.4 46.825 126 61 3 123 245 6 128 7.80e-29 110
Msa0218390 AT1G76590.1 32.377 244 135 11 117 344 14 243 8.01e-29 112
Msa0218390 AT2G27930.3 47.200 125 60 3 123 244 6 127 1.40e-28 109
Msa0218390 AT2G27930.2 47.200 125 60 3 123 244 6 127 1.40e-28 109
Msa0218390 AT5G46710.1 38.760 129 75 3 95 223 4 128 1.02e-21 92.4
Msa0218390 AT5G46710.2 38.760 129 75 3 95 223 4 128 1.54e-21 90.5
Msa0218390 AT1G32700.2 48.936 94 39 2 151 244 2 86 3.80e-21 89.7
Msa0218390 AT5G46710.3 43.564 101 55 2 123 223 14 112 6.64e-21 89.7
Msa0218390 AT1G31040.1 38.525 122 63 5 123 244 21 130 1.01e-16 79.0
Msa0218390 AT2G12646.3 38.095 126 67 5 119 244 1 115 2.56e-16 78.2
Msa0218390 AT2G12646.1 38.525 122 64 5 123 244 8 118 3.81e-16 77.8
Msa0218390 AT2G12646.2 38.525 122 64 5 123 244 8 118 3.81e-16 77.8
Msa0218390 AT3G60670.1 38.525 122 64 4 123 244 9 119 8.53e-15 73.6
Msa0218390 AT2G01818.1 28.085 235 134 9 123 347 13 222 9.43e-13 67.4
Msa0218390 AT2G27930.5 47.945 73 33 2 176 245 61 131 5.83e-11 61.6
Msa0218390 AT2G27930.6 47.945 73 33 2 176 245 61 131 5.83e-11 61.6

Find 45 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTCTTCCATCTCTTT+AGG 0.173263 2_1:+65516606 None:intergenic
CCATTTCTTCCATCTCTTTA+GGG 0.175139 2_1:+65516607 None:intergenic
AAGAATGCTTTCTCTGTCTT+TGG 0.205190 2_1:+65516434 None:intergenic
CTTGAATTTGAACGATTAAC+AGG 0.274373 2_1:+65509924 None:intergenic
TTACCAATCTTCATTCTCTT+AGG 0.283981 2_1:+65510998 None:intergenic
CCCTAAAGAGATGGAAGAAA+TGG 0.314047 2_1:-65516607 Msa0218390:CDS
GAGATGTGATATATATCTTA+TGG 0.328572 2_1:-65516962 Msa0218390:CDS
GGAAGAAATGCAAAGATTAC+TGG 0.334238 2_1:-65510126 Msa0218390:CDS
AAGTGGAATCCACGAGATTT+CGG 0.343179 2_1:+65510936 None:intergenic
TTAGAAGACGCGAGAATTGA+TGG 0.420130 2_1:-65516501 Msa0218390:CDS
ATGGATTGCCATTGCAATCA+AGG 0.427353 2_1:+65511375 None:intergenic
TACAAGCATCTTGACATCCT+TGG 0.432167 2_1:-65511085 Msa0218390:CDS
CAATCTTCATTCTCTTAGGT+TGG 0.437011 2_1:+65511002 None:intergenic
TGTCAGCAACTTCTCGAGCC+AGG 0.456881 2_1:+65511466 None:intergenic
TGTTGTTTCTTAGGATATGA+TGG 0.466924 2_1:-65511495 Msa0218390:intron
CGTTCAAATTCAAGAAGAAA+AGG 0.468206 2_1:-65509915 Msa0218390:CDS
AGACAGAGAAAGCATTCTTC+CGG 0.471091 2_1:-65516430 Msa0218390:intron
GGAGGAGAAAGAGAAGAAGA+CGG 0.474743 2_1:-65509966 Msa0218390:CDS
AAGAAAAGGAATACCTCATC+GGG 0.477547 2_1:-65509901 Msa0218390:CDS
GGTATTAGCACCAAAAGAAA+AGG 0.483460 2_1:-65510090 Msa0218390:CDS
GAGGACGAGGAGGATGAAGA+AGG 0.495955 2_1:-65509990 Msa0218390:CDS
TTTGCATATATAAAAGAGAA+TGG 0.499337 2_1:-65510176 Msa0218390:CDS
AGGATATGATGGCAGTGCCC+TGG 0.500353 2_1:-65511484 Msa0218390:CDS
CGCGAGAATTGATGGGAAAG+AGG 0.502155 2_1:-65516493 Msa0218390:CDS
TGAAGAGAATGTAGAGGACG+AGG 0.506286 2_1:-65510003 Msa0218390:CDS
GAGGAGGATGAAGAAGGAGG+AGG 0.508217 2_1:-65509984 Msa0218390:CDS
CAACCTAAGAGAATGAAGAT+TGG 0.511036 2_1:-65511001 Msa0218390:CDS
AATTGATGGGAAAGAGGATG+AGG 0.516719 2_1:-65516487 Msa0218390:CDS
AGAAAATGAAGAGAATGTAG+AGG 0.531800 2_1:-65510009 Msa0218390:CDS
CAACACTGACTTGGATCACT+CGG 0.540238 2_1:+65511315 None:intergenic
GACGAGGAGGATGAAGAAGG+AGG 0.543514 2_1:-65509987 Msa0218390:CDS
ATATCTAGAGCAATCAATCA+AGG 0.554194 2_1:-65516580 Msa0218390:CDS
ATTACTGGAGAAATCGATCA+AGG 0.560490 2_1:-65510111 Msa0218390:CDS
GTCAGCAACTTCTCGAGCCA+GGG 0.568625 2_1:+65511467 None:intergenic
TAGAAGACGCGAGAATTGAT+GGG 0.574916 2_1:-65516500 Msa0218390:CDS
AGAGAATGTAGAGGACGAGG+AGG 0.577255 2_1:-65510000 Msa0218390:CDS
TCCATTGTGTGGATCTTGCA+CGG 0.580157 2_1:-65511357 Msa0218390:CDS
TCACATAAGTTTGAACTCCA+AGG 0.580665 2_1:+65511068 None:intergenic
CTCAGTAAGAGGTTCAACAT+TGG 0.580850 2_1:-65517018 Msa0218390:intron
GAAGAAAAGGAATACCTCAT+CGG 0.584504 2_1:-65509902 Msa0218390:CDS
TCTGAAACGAAAACTAGAAG+AGG 0.593103 2_1:-65510045 Msa0218390:CDS
GCATATATAAAAGAGAATGG+AGG 0.604209 2_1:-65510173 Msa0218390:CDS
TGCAATGGCAATCCATTGTG+TGG 0.634353 2_1:-65511368 Msa0218390:CDS
CACTGACTTGGATCACTCGG+TGG 0.654344 2_1:+65511318 None:intergenic
TCCGTGCAAGATCCACACAA+TGG 0.691156 2_1:+65511356 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAAAAAAATATAAT+AGG + chr2_1:65510118-65510137 None:intergenic 0.0%
!!! TTATTAAAATTTTTAATATA+TGG + chr2_1:65512573-65512592 None:intergenic 0.0%
!! TAAATAAATAAATAAAAAAT+TGG - chr2_1:65516394-65516413 Msa0218390:intron 0.0%
!! AAATAAATAAATAAAAAATT+GGG - chr2_1:65516395-65516414 Msa0218390:intron 0.0%
!!! TAATTTTTAAAGAGAAAATT+AGG + chr2_1:65510949-65510968 None:intergenic 10.0%
!! AACTGTAAAAAAAAAAAAAT+TGG - chr2_1:65511115-65511134 Msa0218390:CDS 10.0%
!! TATATAGTTAAATTATAAAC+TGG - chr2_1:65512352-65512371 Msa0218390:intron 10.0%
!! AAAATAGAATATATGTATAA+AGG - chr2_1:65512471-65512490 Msa0218390:intron 10.0%
!!! CTAATTTATTTTTTGATTTT+TGG + chr2_1:65512498-65512517 None:intergenic 10.0%
!! AAAATCAAAAAATAAATTAG+AGG - chr2_1:65512498-65512517 Msa0218390:intron 10.0%
!! AAATCAAAAAATAAATTAGA+GGG - chr2_1:65512499-65512518 Msa0218390:intron 10.0%
!! TATAAATTTGATATATTTAG+AGG - chr2_1:65512529-65512548 Msa0218390:intron 10.0%
!! ATAAATTTGATATATTTAGA+GGG - chr2_1:65512530-65512549 Msa0218390:intron 10.0%
!!! CTAATTTTGATTTTTAAAAT+TGG + chr2_1:65512803-65512822 None:intergenic 10.0%
!!! TTATTTGAAAATAATGATTT+TGG + chr2_1:65512857-65512876 None:intergenic 10.0%
!!! AGTACTAATTTTAATAATAT+TGG - chr2_1:65512965-65512984 Msa0218390:intron 10.0%
!!! GTACTAATTTTAATAATATT+GGG - chr2_1:65512966-65512985 Msa0218390:intron 10.0%
!! AACAGATTAATATTAAAATT+CGG + chr2_1:65513085-65513104 None:intergenic 10.0%
!!! AGTTATAAATTATATTTTTG+TGG - chr2_1:65514246-65514265 Msa0218390:intron 10.0%
!! AAAAATATTATCTCTATTAA+GGG + chr2_1:65514416-65514435 None:intergenic 10.0%
!! GTATATATAGAAAAATTTAA+AGG + chr2_1:65514452-65514471 None:intergenic 10.0%
!!! TTTTTCTATATATACATTTA+TGG - chr2_1:65514457-65514476 Msa0218390:intron 10.0%
!! AAAAATAAAATGAATAGAAA+CGG + chr2_1:65515778-65515797 None:intergenic 10.0%
!! ATTAAACCAAATATTTGAAA+TGG - chr2_1:65510816-65510835 Msa0218390:intron 15.0%
!! ATTTACAATCAAATCAAATA+TGG + chr2_1:65511047-65511066 None:intergenic 15.0%
!! ACAGATTAATATTAAAATTC+GGG + chr2_1:65513084-65513103 None:intergenic 15.0%
!! TAATCTGTTAGTATTATTAT+TGG - chr2_1:65513096-65513115 Msa0218390:intron 15.0%
!! AGAAAAATATTAGAGAATTA+GGG - chr2_1:65513497-65513516 Msa0218390:intron 15.0%
!! CAAAAATATTATCTCTATTA+AGG + chr2_1:65514417-65514436 None:intergenic 15.0%
!! AAGAAGAAAAAAAAATGAAA+AGG - chr2_1:65514788-65514807 Msa0218390:intron 15.0%
!!! AAATTTTAAATCTTTCATCT+TGG + chr2_1:65514892-65514911 None:intergenic 15.0%
!! TTTATCATAAATCTAATTGT+TGG - chr2_1:65514976-65514995 Msa0218390:intron 15.0%
!! TTATCATAAATCTAATTGTT+GGG - chr2_1:65514977-65514996 Msa0218390:intron 15.0%
!!! GTGAAAATTTTCAATAAAAA+TGG + chr2_1:65515344-65515363 None:intergenic 15.0%
!! AAAATAAAATGAATAGAAAC+GGG + chr2_1:65515777-65515796 None:intergenic 15.0%
!!! TGATATTTAAATGAGTATTT+TGG - chr2_1:65516364-65516383 Msa0218390:intron 15.0%
!!! ACTTTTTTTGTTTTTGTTTT+TGG + chr2_1:65516604-65516623 None:intergenic 15.0%
!!! TGTTTGTTACAAAATAAAAA+AGG + chr2_1:65516637-65516656 None:intergenic 15.0%
!!! TATTTGACTTTTGAAAATAA+TGG - chr2_1:65516704-65516723 Msa0218390:intron 15.0%
!!! TCCTTTTATTACTATTAATC+CGG - chr2_1:65510196-65510215 Msa0218390:intron 20.0%
!!! ATTTTGTCTGCAATATTTTT+TGG + chr2_1:65510474-65510493 None:intergenic 20.0%
!! CTTTGATTAACCTTAAAAAA+AGG + chr2_1:65510668-65510687 None:intergenic 20.0%
!! ACATTTCCATTTCAAATATT+TGG + chr2_1:65510825-65510844 None:intergenic 20.0%
!! ACATAATTTATCCAAAATAG+TGG - chr2_1:65510985-65511004 Msa0218390:CDS 20.0%
!! TTATTCAAAATAATATCCTC+AGG + chr2_1:65511454-65511473 None:intergenic 20.0%
!!! AAAAAATCATTGTTTTCTGA+CGG + chr2_1:65512171-65512190 None:intergenic 20.0%
!!! GTCATAAAAGAAAAATCTTT+TGG - chr2_1:65512403-65512422 Msa0218390:intron 20.0%
!! CAGATTAATATTAAAATTCG+GGG + chr2_1:65513083-65513102 None:intergenic 20.0%
!! TATAGATGTTATGAATAATG+AGG - chr2_1:65513189-65513208 Msa0218390:intron 20.0%
!! TTAACTAGTTAGTTAAAGAA+TGG - chr2_1:65513223-65513242 Msa0218390:intron 20.0%
!! TAACTAGTTAGTTAAAGAAT+GGG - chr2_1:65513224-65513243 Msa0218390:intron 20.0%
!! GAGAAAAATATTAGAGAATT+AGG - chr2_1:65513496-65513515 Msa0218390:intron 20.0%
!! TTCATAACAACCTTAAAATT+GGG + chr2_1:65513782-65513801 None:intergenic 20.0%
!! AATTTGAAAACAAAACATAC+CGG + chr2_1:65514353-65514372 None:intergenic 20.0%
!!! TATTTTTATCTTCTCTAAGT+TGG - chr2_1:65514719-65514738 Msa0218390:intron 20.0%
!!! ATTTTTATCTTCTCTAAGTT+GGG - chr2_1:65514720-65514739 Msa0218390:intron 20.0%
!! TAAAGTCAAAATTTCGAAAT+TGG - chr2_1:65515074-65515093 Msa0218390:intron 20.0%
!! TTTCAATAAAAATGGTGATT+TGG + chr2_1:65515336-65515355 None:intergenic 20.0%
!! CTTGAATTATAAATCAGATA+AGG - chr2_1:65515860-65515879 Msa0218390:intron 20.0%
!!! ACTTAATTTAAAACAGTGTT+AGG - chr2_1:65516300-65516319 Msa0218390:intron 20.0%
!! TTTGCATATATAAAAGAGAA+TGG - chr2_1:65516831-65516850 Msa0218390:intron 20.0%
! TAGTGAAATTTACAAACTTG+TGG - chr2_1:65509903-65509922 Msa0218390:CDS 25.0%
! GAGATGTGATATATATCTTA+TGG - chr2_1:65510045-65510064 Msa0218390:CDS 25.0%
! TCCGGATTAATAGTAATAAA+AGG + chr2_1:65510200-65510219 None:intergenic 25.0%
! TTTGCGTTTATAAAAAAGGA+TGG - chr2_1:65510362-65510381 Msa0218390:intron 25.0%
! AAGCCAAATTCAAAAAGAAA+GGG - chr2_1:65510626-65510645 Msa0218390:intron 25.0%
!! ATTCCCTTTCTTTTTGAATT+TGG + chr2_1:65510632-65510651 None:intergenic 25.0%
! AAGTAGAAATCTATCACATA+TGG + chr2_1:65510714-65510733 None:intergenic 25.0%
! ATCTAGTACGTAAGAAATTT+AGG - chr2_1:65510912-65510931 Msa0218390:intron 25.0%
! ATATCATTTACTCTCAAGTT+TGG - chr2_1:65511154-65511173 Msa0218390:intron 25.0%
!! AAGGATAATTTGATTCGTTT+AGG - chr2_1:65511537-65511556 Msa0218390:intron 25.0%
!! AACAATCATTCATCTTTTCT+TGG - chr2_1:65511611-65511630 Msa0218390:intron 25.0%
! CAACAATAAGCAAATTTCTT+TGG - chr2_1:65511806-65511825 Msa0218390:intron 25.0%
!! GACAAATACTTCTCTTTTAT+TGG - chr2_1:65511919-65511938 Msa0218390:intron 25.0%
! ATCATGGTAAAAAATGCTTT+GGG + chr2_1:65512097-65512116 None:intergenic 25.0%
! AATCATGGTAAAAAATGCTT+TGG + chr2_1:65512098-65512117 None:intergenic 25.0%
! TATCTAGGTTTAGTAAATCA+TGG + chr2_1:65512113-65512132 None:intergenic 25.0%
! AGTTAAAAGCTTGAATATCT+AGG + chr2_1:65512128-65512147 None:intergenic 25.0%
!! TATAAACTGGAGATATTTTG+TGG - chr2_1:65512365-65512384 Msa0218390:intron 25.0%
!! TCTAGTGTTGAAAAAAAACT+TGG + chr2_1:65512646-65512665 None:intergenic 25.0%
!!! TTTTTTCAACACTAGAATTG+TGG - chr2_1:65512650-65512669 Msa0218390:intron 25.0%
!!! CCTTAGTTGTGTTTTTTTTA+GGG + chr2_1:65512748-65512767 None:intergenic 25.0%
! TCGAAACAATTCATATTACT+AGG - chr2_1:65512897-65512916 Msa0218390:intron 25.0%
! TTAATAATATTGGGTGAAAG+TGG - chr2_1:65512975-65512994 Msa0218390:intron 25.0%
!!! AAAGTTGTGAAGTATTTTAG+TGG - chr2_1:65513341-65513360 Msa0218390:intron 25.0%
!!! TATTTTAGTGGTTTAGATAG+AGG - chr2_1:65513353-65513372 Msa0218390:intron 25.0%
!!! ATTTTAGTGGTTTAGATAGA+GGG - chr2_1:65513354-65513373 Msa0218390:intron 25.0%
! TCTATTTATAGCCACTATTT+AGG + chr2_1:65513478-65513497 None:intergenic 25.0%
! AGAAAAAGAAAGAAATTGAG+AGG - chr2_1:65513526-65513545 Msa0218390:intron 25.0%
!! CAAAATTTAAAACCCAAAGA+TGG + chr2_1:65513706-65513725 None:intergenic 25.0%
!!! CATCTTTGGGTTTTAAATTT+TGG - chr2_1:65513704-65513723 Msa0218390:intron 25.0%
!!! TGGGTTTTAAATTTTGGAAA+CGG - chr2_1:65513710-65513729 Msa0218390:intron 25.0%
!! CTTATTGTTTCCCAATTTTA+AGG - chr2_1:65513769-65513788 Msa0218390:intron 25.0%
! GTTCATAACAACCTTAAAAT+TGG + chr2_1:65513783-65513802 None:intergenic 25.0%
! TTAGTAAAAATGGTAGTCAT+TGG - chr2_1:65513946-65513965 Msa0218390:intron 25.0%
! ATTTGAAAACAAAACATACC+GGG + chr2_1:65514352-65514371 None:intergenic 25.0%
!!! AAATGAAAAGGTATTGTTGT+AGG - chr2_1:65514800-65514819 Msa0218390:intron 25.0%
! TTGATCAATATAGAACCATA+TGG + chr2_1:65515046-65515065 None:intergenic 25.0%
!! ATGGTTCTATATTGATCAAA+TGG - chr2_1:65515047-65515066 Msa0218390:intron 25.0%
!!! TCATTTTTTTTTTCTTCCCT+TGG - chr2_1:65516137-65516156 Msa0218390:intron 25.0%
!!! CATTTTTTTTTTCTTCCCTT+GGG - chr2_1:65516138-65516157 Msa0218390:intron 25.0%
!!! ATTTTTTTTTTCTTCCCTTG+GGG - chr2_1:65516139-65516158 Msa0218390:intron 25.0%
! CAAAATCAGAGATATGATAA+AGG + chr2_1:65516246-65516265 None:intergenic 25.0%
! CTCTTGAATATGAATAAGTA+CGG + chr2_1:65516553-65516572 None:intergenic 25.0%
!!! AACTTTTTAGCCTTTTCTTT+TGG + chr2_1:65516930-65516949 None:intergenic 25.0%
ACTAGAGCTATTAATGACAT+AGG + chr2_1:65509947-65509966 None:intergenic 30.0%
AGGTTCAACATTGGAAAAAT+CGG - chr2_1:65509998-65510017 Msa0218390:CDS 30.0%
!!! CTCTACTTATTTTTGCTCTT+TGG - chr2_1:65510069-65510088 Msa0218390:CDS 30.0%
ACTATTAATCCGGAGATTAA+AGG - chr2_1:65510206-65510225 Msa0218390:intron 30.0%
! ACTTTTCTTTCAACCATTAC+CGG - chr2_1:65510253-65510272 Msa0218390:intron 30.0%
ATCAACGTAAGTACAATAAC+CGG + chr2_1:65510283-65510302 None:intergenic 30.0%
!!! CCTTTTTTATAAACGCAAAC+TGG + chr2_1:65510361-65510380 None:intergenic 30.0%
CCAGTTTGCGTTTATAAAAA+AGG - chr2_1:65510358-65510377 Msa0218390:intron 30.0%
! TTTTGTAAACCCTAAAGAGA+TGG - chr2_1:65510391-65510410 Msa0218390:intron 30.0%
! ATATCTAGAGCAATCAATCA+AGG - chr2_1:65510427-65510446 Msa0218390:intron 30.0%
!! TTTTTGGCCTTCTCTTTTTT+AGG + chr2_1:65510458-65510477 None:intergenic 30.0%
GTAGAAAAAGAAATGGAAGA+AGG - chr2_1:65510548-65510567 Msa0218390:intron 30.0%
CAAGCCAAATTCAAAAAGAA+AGG - chr2_1:65510625-65510644 Msa0218390:intron 30.0%
! AATATGCTTTGCTATGTGTT+AGG - chr2_1:65510790-65510809 Msa0218390:intron 30.0%
AGAAATAGAACAACAAGCTA+AGG - chr2_1:65511190-65511209 Msa0218390:intron 30.0%
! GTAGAAGGGTTATCTTTTAA+AGG - chr2_1:65511240-65511259 Msa0218390:intron 30.0%
TGAAGCAAATAACAATGAAC+AGG - chr2_1:65511305-65511324 Msa0218390:intron 30.0%
!! ATCTGAGTAATTTGTTGATG+AGG - chr2_1:65511396-65511415 Msa0218390:CDS 30.0%
!! CGTGAAAACTTGTTAACAAT+AGG - chr2_1:65511505-65511524 Msa0218390:intron 30.0%
TAACAATAGGATACCTACTA+AGG - chr2_1:65511518-65511537 Msa0218390:intron 30.0%
CGAATCAAATTATCCTTAGT+AGG + chr2_1:65511534-65511553 None:intergenic 30.0%
! TAATTTGATTCGTTTAGGAG+TGG - chr2_1:65511542-65511561 Msa0218390:intron 30.0%
!! AATTCATTGATTTCCATTCG+TGG - chr2_1:65511894-65511913 Msa0218390:intron 30.0%
TGAGAAACAAGGTTTAAACA+TGG + chr2_1:65512071-65512090 None:intergenic 30.0%
CCCTAAAAAAAACACAACTA+AGG - chr2_1:65512745-65512764 Msa0218390:intron 30.0%
!!! GCCTTAGTTGTGTTTTTTTT+AGG + chr2_1:65512749-65512768 None:intergenic 30.0%
TATGAATAATGAGGAAGTAG+AGG - chr2_1:65513198-65513217 Msa0218390:intron 30.0%
AAAGAATAGTAACCAGACTA+AGG - chr2_1:65513408-65513427 Msa0218390:intron 30.0%
AAGAATAGTAACCAGACTAA+GGG - chr2_1:65513409-65513428 Msa0218390:intron 30.0%
AGAAAACTAAGCCTAAATAG+TGG - chr2_1:65513464-65513483 Msa0218390:intron 30.0%
TAAACGAAAAACTAGGGTTA+AGG - chr2_1:65513551-65513570 Msa0218390:intron 30.0%
!!! GGGTTTTAAATTTTGGAAAC+GGG - chr2_1:65513711-65513730 Msa0218390:intron 30.0%
!!! GGTTTTAAATTTTGGAAACG+GGG - chr2_1:65513712-65513731 Msa0218390:intron 30.0%
AAACAAGGTTCATAATCACA+AGG + chr2_1:65513805-65513824 None:intergenic 30.0%
! GGTTAGAGTGTTAGTAAAAA+TGG - chr2_1:65513936-65513955 Msa0218390:intron 30.0%
TCTCAAATGCTATCATATCT+TGG + chr2_1:65514757-65514776 None:intergenic 30.0%
!! CTAGAAATCCAAATTGGTTT+TGG + chr2_1:65514832-65514851 None:intergenic 30.0%
! GATTTCTAGAAGCAGAAATA+TGG - chr2_1:65514843-65514862 Msa0218390:intron 30.0%
!!! GGGTTTCACTATTTTAATGT+TGG - chr2_1:65514997-65515016 Msa0218390:intron 30.0%
TGTCATATTCTAGCATATAG+AGG - chr2_1:65515218-65515237 Msa0218390:intron 30.0%
TCATTGTCAAAAGTCGAATT+TGG + chr2_1:65515401-65515420 None:intergenic 30.0%
TTTGACAATGACAATTGGAA+CGG - chr2_1:65515410-65515429 Msa0218390:intron 30.0%
!!! GTTGAGTTTTGTTGTTTCTT+AGG - chr2_1:65515503-65515522 Msa0218390:intron 30.0%
!! TGTTGTTTCTTAGGATATGA+TGG - chr2_1:65515512-65515531 Msa0218390:intron 30.0%
TTACCAATCTTCATTCTCTT+AGG + chr2_1:65516012-65516031 None:intergenic 30.0%
AGAAAAAAAAAATGAGACCG+AGG + chr2_1:65516132-65516151 None:intergenic 30.0%
GAAGTCACTTGATTGAAAAT+TGG + chr2_1:65516203-65516222 None:intergenic 30.0%
! ATAAAAAATTGGGAGAGCAT+TGG - chr2_1:65516405-65516424 Msa0218390:intron 30.0%
ACATCATTATTCCTACCAAT+TGG + chr2_1:65516502-65516521 None:intergenic 30.0%
TATGAATAAGTACGGTGTAT+GGG + chr2_1:65516545-65516564 None:intergenic 30.0%
ATATGAATAAGTACGGTGTA+TGG + chr2_1:65516546-65516565 None:intergenic 30.0%
GCATATATAAAAGAGAATGG+AGG - chr2_1:65516834-65516853 Msa0218390:intron 30.0%
TTTCTTGAACGAAAAAGAGA+TGG - chr2_1:65516860-65516879 Msa0218390:intron 30.0%
AGAAAATGAAGAGAATGTAG+AGG - chr2_1:65516998-65517017 Msa0218390:CDS 30.0%
CTTGAATTTGAACGATTAAC+AGG + chr2_1:65517086-65517105 None:intergenic 30.0%
CGTTCAAATTCAAGAAGAAA+AGG - chr2_1:65517092-65517111 Msa0218390:intron 30.0%
TACAAACTTGTGGATATCCT+CGG - chr2_1:65509913-65509932 Msa0218390:CDS 35.0%
CATTACATGCCTTTAATCTC+CGG + chr2_1:65510218-65510237 None:intergenic 35.0%
AAGTACAATAACCGGTATTC+CGG + chr2_1:65510275-65510294 None:intergenic 35.0%
GCGTTTATAAAAAAGGATGG+AGG - chr2_1:65510365-65510384 Msa0218390:intron 35.0%
CCATTTCTTCCATCTCTTTA+GGG + chr2_1:65510403-65510422 None:intergenic 35.0%
TCCATTTCTTCCATCTCTTT+AGG + chr2_1:65510404-65510423 None:intergenic 35.0%
GGAAGACGTAGAAAAAGAAA+TGG - chr2_1:65510541-65510560 Msa0218390:intron 35.0%
AAGAATGCTTTCTCTGTCTT+TGG + chr2_1:65510576-65510595 None:intergenic 35.0%
AAAGAAAGGGAATAGCTCAT+AGG - chr2_1:65510639-65510658 Msa0218390:intron 35.0%
AAGAAAGGGAATAGCTCATA+GGG - chr2_1:65510640-65510659 Msa0218390:intron 35.0%
!!! TCATAGGGCACCTTTTTTTA+AGG - chr2_1:65510655-65510674 Msa0218390:intron 35.0%
TTGACGATCAAATGTTCGAA+AGG + chr2_1:65510772-65510791 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTT+AGG - chr2_1:65510839-65510858 Msa0218390:intron 35.0%
!! CTTCTTAACTTGTGTCCTAA+GGG + chr2_1:65510857-65510876 None:intergenic 35.0%
TTGAGTGCATACTTTGATTG+TGG - chr2_1:65511010-65511029 Msa0218390:CDS 35.0%
! AATGATGATGCTAGCTCATA+AGG - chr2_1:65511373-65511392 Msa0218390:CDS 35.0%
!! TGAGTAATTTGTTGATGAGG+AGG - chr2_1:65511399-65511418 Msa0218390:CDS 35.0%
GAGGAGGAAAACTTTAATGA+AGG - chr2_1:65511415-65511434 Msa0218390:CDS 35.0%
AAATAGAGAGAGACTTTGAG+AGG + chr2_1:65511484-65511503 None:intergenic 35.0%
GAATACAACATAGAACCTCT+TGG + chr2_1:65511570-65511589 None:intergenic 35.0%
GGTTCTATGTTGTATTCTAG+AGG - chr2_1:65511573-65511592 Msa0218390:intron 35.0%
! ATGTTGTATTCTAGAGGTTG+AGG - chr2_1:65511579-65511598 Msa0218390:intron 35.0%
GATGAATGATTGTTTCCTCT+TGG + chr2_1:65511605-65511624 None:intergenic 35.0%
AACGAAGAACAAGATGTCAA+AGG + chr2_1:65511656-65511675 None:intergenic 35.0%
TTTGACATCTTGTTCTTCGT+TGG - chr2_1:65511655-65511674 Msa0218390:intron 35.0%
TGGAAATCAATGAATTGAGC+TGG + chr2_1:65511890-65511909 None:intergenic 35.0%
TACGAAAGTAAAGTGCAAAC+AGG - chr2_1:65513289-65513308 Msa0218390:intron 35.0%
AACAGGCTGCATTAGTAAAA+CGG - chr2_1:65513306-65513325 Msa0218390:intron 35.0%
AGAGGACTAAACGAAAAACT+AGG - chr2_1:65513544-65513563 Msa0218390:intron 35.0%
GAGGACTAAACGAAAAACTA+GGG - chr2_1:65513545-65513564 Msa0218390:intron 35.0%
TCTTCTATGAATTCGAGCTA+AGG - chr2_1:65513668-65513687 Msa0218390:intron 35.0%
CTTCTATGAATTCGAGCTAA+GGG - chr2_1:65513669-65513688 Msa0218390:intron 35.0%
TTCTATGAATTCGAGCTAAG+GGG - chr2_1:65513670-65513689 Msa0218390:intron 35.0%
GGGAGAAATTATCCATCTTT+GGG - chr2_1:65513691-65513710 Msa0218390:intron 35.0%
CAATAAGCACAACAAGATGA+GGG + chr2_1:65513756-65513775 None:intergenic 35.0%
ACAATAAGCACAACAAGATG+AGG + chr2_1:65513757-65513776 None:intergenic 35.0%
! GTGATTATGAACCTTGTTTC+TGG - chr2_1:65513806-65513825 Msa0218390:intron 35.0%
! GTAGTCATTGGTTGTCATAT+TGG - chr2_1:65513958-65513977 Msa0218390:intron 35.0%
! TTGGTTGTCATATTGGTGAT+CGG - chr2_1:65513965-65513984 Msa0218390:intron 35.0%
!! GTGGTGATAATGGTAATCAA+TGG - chr2_1:65514056-65514075 Msa0218390:intron 35.0%
!! GTGATAATGGTAATCAATGG+TGG - chr2_1:65514059-65514078 Msa0218390:intron 35.0%
GTTTAACTCGCAATTTATCC+CGG - chr2_1:65514331-65514350 Msa0218390:intron 35.0%
! TTAATATTAGTGGGTGCGTT+TGG + chr2_1:65514497-65514516 None:intergenic 35.0%
GTTTGATGTTAAGACTTGTC+AGG - chr2_1:65514603-65514622 Msa0218390:intron 35.0%
! CTGCTTCTAGAAATCCAAAT+TGG + chr2_1:65514838-65514857 None:intergenic 35.0%
ATAAGTCCCCATAATCCTAT+TGG - chr2_1:65515243-65515262 Msa0218390:intron 35.0%
TATTGTGACAGAGATTCTAG+AGG + chr2_1:65515293-65515312 None:intergenic 35.0%
! CGACTTTTGACAATGACAAT+TGG - chr2_1:65515405-65515424 Msa0218390:intron 35.0%
! GACAATCACAGCATTTTTCA+TGG - chr2_1:65515560-65515579 Msa0218390:intron 35.0%
!! ACTCATTTTTCGCTTCGTTT+TGG + chr2_1:65515599-65515618 None:intergenic 35.0%
! AAGTTTTGCCTTGATTGCAA+TGG - chr2_1:65515624-65515643 Msa0218390:intron 35.0%
TCACATAAGTTTGAACTCCA+AGG + chr2_1:65515942-65515961 None:intergenic 35.0%
CAATCTTCATTCTCTTAGGT+TGG + chr2_1:65516008-65516027 None:intergenic 35.0%
CAACCTAAGAGAATGAAGAT+TGG - chr2_1:65516006-65516025 Msa0218390:intron 35.0%
!! TTCCACTTACTTTTGCTCTT+TGG - chr2_1:65516086-65516105 Msa0218390:intron 35.0%
! CTTTTCAACCTTAGTGATCT+GGG + chr2_1:65516180-65516199 None:intergenic 35.0%
TGGTAGGAATAATGATGTGT+AGG - chr2_1:65516504-65516523 Msa0218390:CDS 35.0%
GGTAGGAATAATGATGTGTA+GGG - chr2_1:65516505-65516524 Msa0218390:CDS 35.0%
GTAGGAATAATGATGTGTAG+GGG - chr2_1:65516506-65516525 Msa0218390:CDS 35.0%
ATGAATAAGTACGGTGTATG+GGG + chr2_1:65516544-65516563 None:intergenic 35.0%
GGAAGAAATGCAAAGATTAC+TGG - chr2_1:65516881-65516900 Msa0218390:intron 35.0%
ATTACTGGAGAAATCGATCA+AGG - chr2_1:65516896-65516915 Msa0218390:intron 35.0%
GGTATTAGCACCAAAAGAAA+AGG - chr2_1:65516917-65516936 Msa0218390:intron 35.0%
! TCTGAAACGAAAACTAGAAG+AGG - chr2_1:65516962-65516981 Msa0218390:CDS 35.0%
GAAGAAAAGGAATACCTCAT+CGG - chr2_1:65517105-65517124 Msa0218390:intron 35.0%
AAGAAAAGGAATACCTCATC+GGG - chr2_1:65517106-65517125 Msa0218390:intron 35.0%
TGACATAGGTTTGAATTCCG+AGG + chr2_1:65509933-65509952 None:intergenic 40.0%
AAACAAGAGAGCTCAGTAAG+AGG - chr2_1:65509978-65509997 Msa0218390:CDS 40.0%
CTCAGTAAGAGGTTCAACAT+TGG - chr2_1:65509989-65510008 Msa0218390:CDS 40.0%
TTGGAAAAATCGGTCACAGT+AGG - chr2_1:65510008-65510027 Msa0218390:CDS 40.0%
TGGAAAAATCGGTCACAGTA+GGG - chr2_1:65510009-65510028 Msa0218390:CDS 40.0%
! TTTTTGCTCTTTGGCATGCA+AGG - chr2_1:65510078-65510097 Msa0218390:CDS 40.0%
! TGGCATGCAAGGTGAATTTT+TGG - chr2_1:65510089-65510108 Msa0218390:CDS 40.0%
! CGGAGATTAAAGGCATGTAA+TGG - chr2_1:65510216-65510235 Msa0218390:intron 40.0%
TTCAACCATTACCGGAATAC+CGG - chr2_1:65510261-65510280 Msa0218390:intron 40.0%
AATAACCGGTATTCCGGTAA+TGG + chr2_1:65510269-65510288 None:intergenic 40.0%
CCCTAAAGAGATGGAAGAAA+TGG - chr2_1:65510400-65510419 Msa0218390:intron 40.0%
TTAGAAGACGCGAGAATTGA+TGG - chr2_1:65510506-65510525 Msa0218390:intron 40.0%
TAGAAGACGCGAGAATTGAT+GGG - chr2_1:65510507-65510526 Msa0218390:intron 40.0%
AATTGATGGGAAAGAGGATG+AGG - chr2_1:65510520-65510539 Msa0218390:intron 40.0%
!! AGACAGAGAAAGCATTCTTC+CGG - chr2_1:65510577-65510596 Msa0218390:intron 40.0%
!! GCTTCTTAACTTGTGTCCTA+AGG + chr2_1:65510858-65510877 None:intergenic 40.0%
! TGCACTCAAGACCACTATTT+TGG + chr2_1:65510999-65511018 None:intergenic 40.0%
AGAACAACAAGCTAAGGAAG+AGG - chr2_1:65511196-65511215 Msa0218390:intron 40.0%
ATGGAAGTTGTTGACGTAGA+AGG - chr2_1:65511225-65511244 Msa0218390:intron 40.0%
TGGAAGTTGTTGACGTAGAA+GGG - chr2_1:65511226-65511245 Msa0218390:intron 40.0%
AGCGTGTCAAACTTCATTCT+TGG - chr2_1:65511841-65511860 Msa0218390:intron 40.0%
GTGTCAAACTTCATTCTTGG+TGG - chr2_1:65511844-65511863 Msa0218390:intron 40.0%
TCAAACTTCATTCTTGGTGG+TGG - chr2_1:65511847-65511866 Msa0218390:intron 40.0%
!! TCATTGATTTCCATTCGTGG+TGG - chr2_1:65511897-65511916 Msa0218390:intron 40.0%
AAGTATTTGTCCACCACGAA+TGG + chr2_1:65511910-65511929 None:intergenic 40.0%
TTGGCCTCAACACTATGTAA+TGG - chr2_1:65511938-65511957 Msa0218390:intron 40.0%
ACCACCATTACATAGTGTTG+AGG + chr2_1:65511945-65511964 None:intergenic 40.0%
AGCACATCTTGTGCTTGAAA+AGG - chr2_1:65512027-65512046 Msa0218390:intron 40.0%
! CTTGTGCTTGAAAAGGCTTT+TGG - chr2_1:65512034-65512053 Msa0218390:intron 40.0%
!!! GAAAAGGCTTTTGGTTTGCT+TGG - chr2_1:65512043-65512062 Msa0218390:intron 40.0%
TCGGCATATGACTATTAGAG+TGG - chr2_1:65513004-65513023 Msa0218390:intron 40.0%
ATTAGAGTGGTCATCGATAG+TGG - chr2_1:65513017-65513036 Msa0218390:intron 40.0%
ACAGGCTGCATTAGTAAAAC+GGG - chr2_1:65513307-65513326 Msa0218390:intron 40.0%
TTAGTGGTTTAGATAGAGGG+AGG - chr2_1:65513357-65513376 Msa0218390:intron 40.0%
TGTTATATGCACCCTTAGTC+TGG + chr2_1:65513423-65513442 None:intergenic 40.0%
ACGAAAAACTAGGGTTAAGG+TGG - chr2_1:65513554-65513573 Msa0218390:intron 40.0%
TCTATGAATTCGAGCTAAGG+GGG - chr2_1:65513671-65513690 Msa0218390:intron 40.0%
GGGGAGAAATTATCCATCTT+TGG - chr2_1:65513690-65513709 Msa0218390:intron 40.0%
!! AAATTTTGGAAACGGGGAGA+AGG - chr2_1:65513718-65513737 Msa0218390:intron 40.0%
!! AATTTTGGAAACGGGGAGAA+GGG - chr2_1:65513719-65513738 Msa0218390:intron 40.0%
CAAATAACACGCCAGAAACA+AGG + chr2_1:65513820-65513839 None:intergenic 40.0%
!! CTTGTTTCTGGCGTGTTATT+TGG - chr2_1:65513818-65513837 Msa0218390:intron 40.0%
!! GTGAATGGAGTGTTATTTGG+CGG - chr2_1:65513843-65513862 Msa0218390:intron 40.0%
GTGGTAAAAGTGGCAGTTAA+CGG - chr2_1:65513887-65513906 Msa0218390:intron 40.0%
GACTAGTGGTCATAGTATGT+TGG - chr2_1:65514107-65514126 Msa0218390:intron 40.0%
TAGTGGTCATAGTATGTTGG+TGG - chr2_1:65514110-65514129 Msa0218390:intron 40.0%
CATAATGGTGGTTAGAGTAC+TGG - chr2_1:65514170-65514189 Msa0218390:intron 40.0%
TCTCTATTAAGGGTCGTTCA+GGG + chr2_1:65514406-65514425 None:intergenic 40.0%
ATCTCTATTAAGGGTCGTTC+AGG + chr2_1:65514407-65514426 None:intergenic 40.0%
GGATGCTTCCAAAACCAATT+TGG - chr2_1:65514821-65514840 Msa0218390:intron 40.0%
AAGCAATCAAGCACTCCATA+TGG - chr2_1:65515028-65515047 Msa0218390:intron 40.0%
! TGGTGGACCAATAGGATTAT+GGG + chr2_1:65515253-65515272 None:intergenic 40.0%
! TTGGTGGACCAATAGGATTA+TGG + chr2_1:65515254-65515273 None:intergenic 40.0%
!! TAGTTCACACAAGGTATTGG+TGG + chr2_1:65515270-65515289 None:intergenic 40.0%
AGGTAGTTCACACAAGGTAT+TGG + chr2_1:65515273-65515292 None:intergenic 40.0%
! TTCTAGAGGTAGTTCACACA+AGG + chr2_1:65515279-65515298 None:intergenic 40.0%
AGTCGAATTTGGACAAGACT+TGG + chr2_1:65515390-65515409 None:intergenic 40.0%
! CATTTTTCGCTTCGTTTTGG+TGG + chr2_1:65515596-65515615 None:intergenic 40.0%
! ATGGATTGCCATTGCAATCA+AGG + chr2_1:65515635-65515654 None:intergenic 40.0%
! CAAATTGACCAACACTGACT+TGG + chr2_1:65515704-65515723 None:intergenic 40.0%
TACAAGCATCTTGACATCCT+TGG - chr2_1:65515922-65515941 Msa0218390:intron 40.0%
AAGTGGAATCCACGAGATTT+CGG + chr2_1:65516074-65516093 None:intergenic 40.0%
TGCCAAAGAGCAAAAGTAAG+TGG + chr2_1:65516091-65516110 None:intergenic 40.0%
! GCTTTTCAACCTTAGTGATC+TGG + chr2_1:65516181-65516200 None:intergenic 40.0%
! TATTCCTACCAATTGGCTCA+CGG + chr2_1:65516495-65516514 None:intergenic 40.0%
TAAAAAACAGTTGCCCGATG+AGG + chr2_1:65517122-65517141 None:intergenic 40.0%
GGAAAAATCGGTCACAGTAG+GGG - chr2_1:65510010-65510029 Msa0218390:CDS 45.0%
GGCATCGCCTAAAAAAGAGA+AGG - chr2_1:65510448-65510467 Msa0218390:intron 45.0%
TCTTCCGGTTAATCGTTCAC+CGG - chr2_1:65510592-65510611 Msa0218390:intron 45.0%
AGGCTGTGATATTACACCTG+AGG - chr2_1:65511435-65511454 Msa0218390:CDS 45.0%
ACATCTTGTTCTTCGTTGGC+TGG - chr2_1:65511659-65511678 Msa0218390:intron 45.0%
! CATCTTGTTCTTCGTTGGCT+GGG - chr2_1:65511660-65511679 Msa0218390:intron 45.0%
GTGCTCACGTTTCAGTTTGA+CGG - chr2_1:65511712-65511731 Msa0218390:intron 45.0%
!! ATGTCTTCAGGCGATTTGGT+TGG - chr2_1:65511740-65511759 Msa0218390:intron 45.0%
GCCTCAACACTATGTAATGG+TGG - chr2_1:65511941-65511960 Msa0218390:intron 45.0%
!! GCTTTGGGATGTGAGAAACA+AGG + chr2_1:65512082-65512101 None:intergenic 45.0%
TGGGTGAAAGTGGTGTATGT+CGG - chr2_1:65512985-65513004 Msa0218390:intron 45.0%
! TCATCGATAGTGGTCCATAG+CGG - chr2_1:65513027-65513046 Msa0218390:intron 45.0%
CAGGCTGCATTAGTAAAACG+GGG - chr2_1:65513308-65513327 Msa0218390:intron 45.0%
AACTAGGGTTAAGGTGGCAA+AGG - chr2_1:65513560-65513579 Msa0218390:intron 45.0%
ATAGTGAGCACGTGAAACCT+AGG - chr2_1:65513587-65513606 Msa0218390:intron 45.0%
ACGTGAAACCTAGGAGAAAG+AGG - chr2_1:65513596-65513615 Msa0218390:intron 45.0%
AAACCTAGGAGAAAGAGGAG+AGG - chr2_1:65513601-65513620 Msa0218390:intron 45.0%
!! ATTTTGGAAACGGGGAGAAG+GGG - chr2_1:65513720-65513739 Msa0218390:intron 45.0%
!! GTTTCTGGCGTGTTATTTGG+CGG - chr2_1:65513821-65513840 Msa0218390:intron 45.0%
! GCGGTGAATGGAGTGTTATT+TGG - chr2_1:65513840-65513859 Msa0218390:intron 45.0%
!! GAGTGTTATTTGGCGGTGAT+TGG - chr2_1:65513850-65513869 Msa0218390:intron 45.0%
TTATTTGGCGGTGATTGGAG+TGG - chr2_1:65513855-65513874 Msa0218390:intron 45.0%
GTTAACGGTGATGTACGAAG+TGG - chr2_1:65513902-65513921 Msa0218390:intron 45.0%
ATGTACGAAGTGGTGGTTTC+TGG - chr2_1:65513912-65513931 Msa0218390:intron 45.0%
! GTTGTCATATTGGTGATCGG+AGG - chr2_1:65513968-65513987 Msa0218390:intron 45.0%
! TATTGGTGATCGGAGGTAGA+TGG - chr2_1:65513975-65513994 Msa0218390:intron 45.0%
GTGGAATGAGTGGTGATTGA+TGG - chr2_1:65514012-65514031 Msa0218390:intron 45.0%
GAATGAGTGGTGATTGATGG+TGG - chr2_1:65514015-65514034 Msa0218390:intron 45.0%
! GTGGTCAATGGTGGTGATAA+TGG - chr2_1:65514046-65514065 Msa0218390:intron 45.0%
GTGGTTGCATTGAAGATCAG+AGG - chr2_1:65514078-65514097 Msa0218390:intron 45.0%
GTTGCATTGAAGATCAGAGG+TGG - chr2_1:65514081-65514100 Msa0218390:intron 45.0%
CATTGAAGATCAGAGGTGGA+TGG - chr2_1:65514085-65514104 Msa0218390:intron 45.0%
! TGGTCATAGTATGTTGGTGG+TGG - chr2_1:65514113-65514132 Msa0218390:intron 45.0%
!! GTGGTTAGAGTACTGGTTGA+TGG - chr2_1:65514177-65514196 Msa0218390:intron 45.0%
GGTGGACCAATAGGATTATG+GGG + chr2_1:65515252-65515271 None:intergenic 45.0%
!! CAAGGTATTGGTGGACCAAT+AGG + chr2_1:65515261-65515280 None:intergenic 45.0%
TGCAATGGCAATCCATTGTG+TGG - chr2_1:65515639-65515658 Msa0218390:intron 45.0%
TCCATTGTGTGGATCTTGCA+CGG - chr2_1:65515650-65515669 Msa0218390:intron 45.0%
!! CAACACTGACTTGGATCACT+CGG + chr2_1:65515695-65515714 None:intergenic 45.0%
! CTTTTGCTCTTTGGCATGCA+AGG - chr2_1:65516095-65516114 Msa0218390:intron 45.0%
GCAAGGTAGATTCATGACCT+CGG - chr2_1:65516112-65516131 Msa0218390:intron 45.0%
TGAAGAGAATGTAGAGGACG+AGG - chr2_1:65517004-65517023 Msa0218390:CDS 45.0%
GGAGGAGAAAGAGAAGAAGA+CGG - chr2_1:65517041-65517060 Msa0218390:intron 45.0%
!!! TTTTTATATTATGTTTTAAA+CGG - chr2_1:65510128-65510147 Msa0218390:CDS 5.0%
!! TTATTAAATTAAATTATTCA+TGG - chr2_1:65513165-65513184 Msa0218390:intron 5.0%
!! TATATATAGAAAAATTTAAA+GGG + chr2_1:65514451-65514470 None:intergenic 5.0%
!! TAAATTTAATTAATATTAGT+GGG + chr2_1:65514506-65514525 None:intergenic 5.0%
!! TTAAATTTAATTAATATTAG+TGG + chr2_1:65514507-65514526 None:intergenic 5.0%
!!! TCTAATTTTATATTATTATA+AGG - chr2_1:65514559-65514578 Msa0218390:intron 5.0%
!!! TTAAATTATTTTTTTGAATT+TGG - chr2_1:65515814-65515833 Msa0218390:intron 5.0%
CGCGAGAATTGATGGGAAAG+AGG - chr2_1:65510514-65510533 Msa0218390:intron 50.0%
GAAGCCGGTGAACGATTAAC+CGG + chr2_1:65510599-65510618 None:intergenic 50.0%
!! TTTGGCTTGCGAAGTGAAGC+CGG + chr2_1:65510614-65510633 None:intergenic 50.0%
CGTTTAGGAGTGGATCCAAG+AGG - chr2_1:65511552-65511571 Msa0218390:intron 50.0%
! TTCTAGAGGTTGAGGCCAAG+AGG - chr2_1:65511587-65511606 Msa0218390:intron 50.0%
GCTCATGTCTTCAGGCGATT+TGG - chr2_1:65511736-65511755 Msa0218390:intron 50.0%
TCAACAACCACGAACCGCTA+TGG + chr2_1:65513044-65513063 None:intergenic 50.0%
GTTCGTGGTTGTTGAAGTGG+TGG - chr2_1:65513049-65513068 Msa0218390:intron 50.0%
! AGAGGGAGGTGTAAACAGCA+AGG - chr2_1:65513371-65513390 Msa0218390:intron 50.0%
CTTCCTCTCCTCTTTCTCCT+AGG + chr2_1:65513607-65513626 None:intergenic 50.0%
AGGAGAAAGAGGAGAGGAAG+AGG - chr2_1:65513607-65513626 Msa0218390:intron 50.0%
GGAGAAAGAGGAGAGGAAGA+GGG - chr2_1:65513608-65513627 Msa0218390:intron 50.0%
AAAGAGGAGAGGAAGAGGGA+AGG - chr2_1:65513612-65513631 Msa0218390:intron 50.0%
AAGAGGAGAGGAAGAGGGAA+GGG - chr2_1:65513613-65513632 Msa0218390:intron 50.0%
!! GCGTGTTATTTGGCGGTGAA+TGG - chr2_1:65513828-65513847 Msa0218390:intron 50.0%
GTGATTGGAGTGGTGATCGA+CGG - chr2_1:65513865-65513884 Msa0218390:intron 50.0%
GTGATCGACGGTGGTAAAAG+TGG - chr2_1:65513877-65513896 Msa0218390:intron 50.0%
AACGGTGATGTACGAAGTGG+TGG - chr2_1:65513905-65513924 Msa0218390:intron 50.0%
! TACGAAGTGGTGGTTTCTGG+CGG - chr2_1:65513915-65513934 Msa0218390:intron 50.0%
GAGGTAGATGGAGTGGTGAT+CGG - chr2_1:65513987-65514006 Msa0218390:intron 50.0%
!! GTGATTGATGGTGGTGAGAG+TGG - chr2_1:65514024-65514043 Msa0218390:intron 50.0%
!! ATTGATGGTGGTGAGAGTGG+TGG - chr2_1:65514027-65514046 Msa0218390:intron 50.0%
!! ATCAGAGGTGGATGGACTAG+TGG - chr2_1:65514093-65514112 Msa0218390:intron 50.0%
!! TATGTTGGTGGTGGTCGAAG+TGG - chr2_1:65514122-65514141 Msa0218390:intron 50.0%
!! AAGTGGTGACTGATGGTGGT+CGG - chr2_1:65514139-65514158 Msa0218390:intron 50.0%
!!! CAGGGTGGCTGCAAGTTTTT+TGG + chr2_1:65514388-65514407 None:intergenic 50.0%
CTATTAAGGGTCGTTCAGGG+TGG + chr2_1:65514403-65514422 None:intergenic 50.0%
AGACTTGGAGAGAGAGTGAG+AGG + chr2_1:65515375-65515394 None:intergenic 50.0%
TCCGTGCAAGATCCACACAA+TGG + chr2_1:65515654-65515673 None:intergenic 50.0%
CGAGTGATCCAAGTCAGTGT+TGG - chr2_1:65515693-65515712 Msa0218390:intron 50.0%
TCGAGACTATCACACCCCAA+GGG + chr2_1:65516156-65516175 None:intergenic 50.0%
TTCGAGACTATCACACCCCA+AGG + chr2_1:65516157-65516176 None:intergenic 50.0%
GTCTCGAACCCAGATCACTA+AGG - chr2_1:65516169-65516188 Msa0218390:intron 50.0%
ATGTGTCTCCGTGAGCCAAT+TGG - chr2_1:65516484-65516503 Msa0218390:CDS 50.0%
AGAGAATGTAGAGGACGAGG+AGG - chr2_1:65517007-65517026 Msa0218390:CDS 50.0%
GCTAAGGAAGAGGCAGTGCA+TGG - chr2_1:65511206-65511225 Msa0218390:intron 55.0%
TTGACGGCGCTCATGTCTTC+AGG - chr2_1:65511728-65511747 Msa0218390:intron 55.0%
TAGTGGTCCATAGCGGTTCG+TGG - chr2_1:65513034-65513053 Msa0218390:intron 55.0%
GCGGTTCGTGGTTGTTGAAG+TGG - chr2_1:65513046-65513065 Msa0218390:intron 55.0%
!! AGAGGGAAGGGCACTAGCTA+AGG - chr2_1:65513625-65513644 Msa0218390:intron 55.0%
ATTGGAGTGGTGATCGACGG+TGG - chr2_1:65513868-65513887 Msa0218390:intron 55.0%
GTGATCGGAGGTAGATGGAG+TGG - chr2_1:65513980-65513999 Msa0218390:intron 55.0%
GTAGATGGAGTGGTGATCGG+AGG - chr2_1:65513990-65514009 Msa0218390:intron 55.0%
GTGATCGGAGGTGGAATGAG+TGG - chr2_1:65514002-65514021 Msa0218390:intron 55.0%
GTGGTGAGAGTGGTGGTCAA+TGG - chr2_1:65514034-65514053 Msa0218390:intron 55.0%
GTGAGAGTGGTGGTCAATGG+TGG - chr2_1:65514037-65514056 Msa0218390:intron 55.0%
GTGGTCGAAGTGGTGACTGA+TGG - chr2_1:65514132-65514151 Msa0218390:intron 55.0%
GTCGAAGTGGTGACTGATGG+TGG - chr2_1:65514135-65514154 Msa0218390:intron 55.0%
TGGTCGGTGGGGGTTCATAA+TGG - chr2_1:65514155-65514174 Msa0218390:intron 55.0%
TCGGTGGGGGTTCATAATGG+TGG - chr2_1:65514158-65514177 Msa0218390:intron 55.0%
AGGATATGATGGCAGTGCCC+TGG - chr2_1:65515523-65515542 Msa0218390:intron 55.0%
GTCAGCAACTTCTCGAGCCA+GGG + chr2_1:65515543-65515562 None:intergenic 55.0%
TGTCAGCAACTTCTCGAGCC+AGG + chr2_1:65515544-65515563 None:intergenic 55.0%
!! CACTGACTTGGATCACTCGG+TGG + chr2_1:65515692-65515711 None:intergenic 55.0%
GACATGCGACCGAAATCTCG+TGG - chr2_1:65516062-65516081 Msa0218390:intron 55.0%
GTCTCCGTGAGCCAATTGGT+AGG - chr2_1:65516488-65516507 Msa0218390:CDS 55.0%
GAGGACGAGGAGGATGAAGA+AGG - chr2_1:65517017-65517036 Msa0218390:intron 55.0%
GACGAGGAGGATGAAGAAGG+AGG - chr2_1:65517020-65517039 Msa0218390:intron 55.0%
GAGGAGGATGAAGAAGGAGG+AGG - chr2_1:65517023-65517042 Msa0218390:intron 55.0%
GATGGAGTGGTGATCGGAGG+TGG - chr2_1:65513993-65514012 Msa0218390:intron 60.0%
!! TGGTGACTGATGGTGGTCGG+TGG - chr2_1:65514142-65514161 Msa0218390:intron 60.0%
!! GGTGACTGATGGTGGTCGGT+GGG - chr2_1:65514143-65514162 Msa0218390:intron 60.0%
!! GTGACTGATGGTGGTCGGTG+GGG - chr2_1:65514144-65514163 Msa0218390:intron 60.0%
!! TGACTGATGGTGGTCGGTGG+GGG - chr2_1:65514145-65514164 Msa0218390:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 65509887 65517142 65509887 ID=Msa0218390;Name=Msa0218390
chr2_1 mRNA 65509887 65517142 65509887 ID=Msa0218390-mRNA-1;Parent=Msa0218390;Name=Msa0218390-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0.2|0.33|6|0|347
chr2_1 exon 65517138 65517142 65517138 ID=Msa0218390-mRNA-1:exon:18302;Parent=Msa0218390-mRNA-1
chr2_1 exon 65516930 65517035 65516930 ID=Msa0218390-mRNA-1:exon:18301;Parent=Msa0218390-mRNA-1
chr2_1 exon 65516431 65516667 65516431 ID=Msa0218390-mRNA-1:exon:18300;Parent=Msa0218390-mRNA-1
chr2_1 exon 65511325 65511504 65511325 ID=Msa0218390-mRNA-1:exon:18299;Parent=Msa0218390-mRNA-1
chr2_1 exon 65510949 65511152 65510949 ID=Msa0218390-mRNA-1:exon:18298;Parent=Msa0218390-mRNA-1
chr2_1 exon 65509887 65510198 65509887 ID=Msa0218390-mRNA-1:exon:18297;Parent=Msa0218390-mRNA-1
chr2_1 CDS 65517138 65517142 65517138 ID=Msa0218390-mRNA-1:cds;Parent=Msa0218390-mRNA-1
chr2_1 CDS 65516930 65517035 65516930 ID=Msa0218390-mRNA-1:cds;Parent=Msa0218390-mRNA-1
chr2_1 CDS 65516431 65516667 65516431 ID=Msa0218390-mRNA-1:cds;Parent=Msa0218390-mRNA-1
chr2_1 CDS 65511325 65511504 65511325 ID=Msa0218390-mRNA-1:cds;Parent=Msa0218390-mRNA-1
chr2_1 CDS 65510949 65511152 65510949 ID=Msa0218390-mRNA-1:cds;Parent=Msa0218390-mRNA-1
chr2_1 CDS 65509887 65510198 65509887 ID=Msa0218390-mRNA-1:cds;Parent=Msa0218390-mRNA-1
Gene Sequence

>Msa0218390

ATGAATAAGAGGTTCAACATTGGAAAAATCGGTCACAGTAGGGGCTCTTTTTGTAAGAGATGTGATATATATCTTATGGACTCTACTTATTTTTGCTCTTTGGCATGCAAGTTTGCGTTTATAAAAAAGGATGGAGGCTTTTTTGTAAACCCTAAAGAGATGGAAGAAATGGAAAGATATCTAGAGCAATCAATCAAGGCATCGCCTAAAAAAGAGAAGGCCAAAAAATATTGCAGACAAAATCTGAAACGAAAATTAGAAGACGCGAGAATTGATGGGAAAGAGGATGAGGAAGACGTAGAAAAAGAAATGGAAGAAGGCGCCAAAGACAGAGAAAGCATTCTTCCGGATATGATGGCAGTGCCCTGGCTCGAGAAGTTGCTGACAATCACAGCATTTTTCATGGCATGTGAAGTCCACCAAAACGAAGCGAAAAATGAGTGTAACAAGTTTTGCCTTGATTGCAATGGCAATCCATTGTGTGGATCTTGCACGGAAACTCATCACAAAGACCACCGAGTGATCCAAATAAGGAGATCGTCTTATACTGATGTAGTTAAGACTACTGAAATTTACAAGCATCTTGACATCCTTGGAGTTCAAACTTATGTGATTAGCAACTTTACAGTTGTATTCATAAACAAGAGAGCTCATCTCCAACCTAAGAGAATGAAGATTGGTAAAATTGCTTACTCTAGTGACTCTCTTTGTAAGACATGCGACCGAAATCTCTTTGCATATATAAAAGAGAATGGAGGTTTTTTCTTGAACGAAAAAGAGATGGAAGAAATGCAAAGATTACTGGAGAAATCGATCAAGGTATTAGCACCAAAAGAAAAGGCTAAAAAGTTGCGTGAGCTAAATCTGAAACGAAAACTAGAAGAGGTAGAAGTTGATAGAGAAAATGAAGAGAATGTAGAGGACGAGGAGGATGAAGAAGGAGGAGGAGAAAGAGAAGAAGACGGAGAAAAAGAAAGTATGATTCCTGTTAATCGTTCAAATTCAAGAAGAAAAGGAATACCTCATCGGGCAACTGTTTTTTAA

Protein sequence

>Msa0218390

MNKRFNIGKIGHSRGSFCKRCDIYLMDSTYFCSLACKFAFIKKDGGFFVNPKEMEEMERYLEQSIKASPKKEKAKKYCRQNLKRKLEDARIDGKEDEEDVEKEMEEGAKDRESILPDMMAVPWLEKLLTITAFFMACEVHQNEAKNECNKFCLDCNGNPLCGSCTETHHKDHRVIQIRRSSYTDVVKTTEIYKHLDILGVQTYVISNFTVVFINKRAHLQPKRMKIGKIAYSSDSLCKTCDRNLFAYIKENGGFFLNEKEMEEMQRLLEKSIKVLAPKEKAKKLRELNLKRKLEEVEVDRENEENVEDEEDEEGGGEREEDGEKESMIPVNRSNSRRKGIPHRATVF*