Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218620 | XP_024632563.1 | 71.958 | 189 | 34 | 3 | 18 | 198 | 39 | 216 | 3.23e-76 | 263 |
| Msa0218620 | XP_024632563.1 | 73.020 | 404 | 29 | 5 | 116 | 448 | 301 | 695 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218620 | sp|Q6NQJ7|FRS4_ARATH | 45.407 | 381 | 130 | 7 | 146 | 448 | 307 | 687 | 2.10e-96 | 308 |
| Msa0218620 | sp|Q6NQJ7|FRS4_ARATH | 69.118 | 136 | 35 | 2 | 18 | 146 | 22 | 157 | 3.19e-53 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218620 | A0A396JDB2 | 71.958 | 189 | 34 | 3 | 18 | 198 | 39 | 216 | 1.54e-76 | 263 |
| Msa0218620 | A0A396JDB2 | 73.020 | 404 | 29 | 5 | 116 | 448 | 301 | 695 | 0.0 | 567 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0218620 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218620 | MtrunA17_Chr2g0329031 | 73.020 | 404 | 29 | 5 | 116 | 448 | 301 | 695 | 0.0 | 567 |
| Msa0218620 | MtrunA17_Chr2g0329031 | 71.958 | 189 | 34 | 3 | 18 | 198 | 39 | 216 | 2.97e-80 | 263 |
| Msa0218620 | MtrunA17_Chr1g0207551 | 38.235 | 340 | 133 | 5 | 146 | 411 | 350 | 686 | 1.59e-61 | 214 |
| Msa0218620 | MtrunA17_Chr1g0207551 | 43.151 | 146 | 60 | 5 | 18 | 145 | 59 | 199 | 7.89e-18 | 86.3 |
| Msa0218620 | MtrunA17_Chr3g0080351 | 37.821 | 312 | 118 | 4 | 158 | 393 | 396 | 707 | 1.58e-59 | 208 |
| Msa0218620 | MtrunA17_Chr3g0080351 | 52.632 | 95 | 23 | 2 | 18 | 90 | 101 | 195 | 5.64e-20 | 93.2 |
| Msa0218620 | MtrunA17_Chr3g0118611 | 29.749 | 279 | 128 | 3 | 148 | 358 | 265 | 543 | 7.27e-32 | 129 |
| Msa0218620 | MtrunA17_Chr5g0440451 | 29.286 | 280 | 128 | 4 | 148 | 358 | 368 | 646 | 1.78e-29 | 122 |
| Msa0218620 | MtrunA17_Chr5g0448761 | 25.974 | 308 | 145 | 5 | 159 | 383 | 398 | 705 | 8.68e-29 | 119 |
| Msa0218620 | MtrunA17_Chr5g0448511 | 24.150 | 294 | 145 | 4 | 159 | 374 | 170 | 463 | 7.25e-25 | 107 |
| Msa0218620 | MtrunA17_Chr1g0202341 | 24.211 | 285 | 143 | 4 | 146 | 357 | 369 | 653 | 4.70e-22 | 99.4 |
| Msa0218620 | MtrunA17_Chr2g0291581 | 31.481 | 162 | 93 | 3 | 142 | 285 | 367 | 528 | 2.26e-19 | 90.9 |
| Msa0218620 | MtrunA17_Chr1g0196541 | 28.387 | 155 | 94 | 3 | 168 | 305 | 332 | 486 | 1.14e-16 | 82.8 |
| Msa0218620 | MtrunA17_Chr2g0296781 | 27.933 | 179 | 105 | 3 | 130 | 293 | 303 | 472 | 5.05e-16 | 80.5 |
| Msa0218620 | MtrunA17_Chr5g0441581 | 32.026 | 153 | 86 | 3 | 168 | 304 | 360 | 510 | 5.63e-16 | 80.5 |
| Msa0218620 | MtrunA17_Chr2g0291591 | 27.778 | 162 | 91 | 2 | 159 | 305 | 390 | 540 | 2.55e-15 | 78.2 |
| Msa0218620 | MtrunA17_Chr2g0324011 | 21.790 | 257 | 118 | 5 | 145 | 318 | 311 | 567 | 3.59e-15 | 77.8 |
| Msa0218620 | MtrunA17_Chr6g0477261 | 25.389 | 193 | 118 | 4 | 130 | 305 | 192 | 375 | 9.68e-15 | 76.6 |
| Msa0218620 | MtrunA17_Chr2g0287061 | 26.695 | 236 | 108 | 2 | 148 | 318 | 465 | 700 | 1.03e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218620 | AT1G76320.1 | 45.407 | 381 | 130 | 7 | 146 | 448 | 307 | 687 | 2.13e-97 | 308 |
| Msa0218620 | AT1G76320.1 | 69.118 | 136 | 35 | 2 | 18 | 146 | 22 | 157 | 3.24e-54 | 193 |
| Msa0218620 | AT1G76320.4 | 45.407 | 381 | 130 | 7 | 146 | 448 | 307 | 687 | 2.13e-97 | 308 |
| Msa0218620 | AT1G76320.4 | 69.118 | 136 | 35 | 2 | 18 | 146 | 22 | 157 | 3.24e-54 | 193 |
| Msa0218620 | AT1G76320.2 | 45.526 | 380 | 129 | 7 | 146 | 448 | 307 | 685 | 3.18e-97 | 308 |
| Msa0218620 | AT1G76320.2 | 69.118 | 136 | 35 | 2 | 18 | 146 | 22 | 157 | 3.65e-54 | 192 |
| Msa0218620 | AT1G76320.3 | 45.730 | 363 | 121 | 5 | 146 | 432 | 307 | 669 | 1.91e-96 | 304 |
| Msa0218620 | AT1G76320.3 | 69.118 | 136 | 35 | 2 | 18 | 146 | 22 | 157 | 1.26e-54 | 193 |
| Msa0218620 | AT4G15090.1 | 38.944 | 303 | 113 | 3 | 146 | 376 | 370 | 672 | 2.38e-65 | 224 |
| Msa0218620 | AT4G15090.1 | 41.611 | 149 | 61 | 6 | 18 | 145 | 76 | 219 | 3.95e-17 | 84.7 |
| Msa0218620 | AT4G15090.5 | 38.944 | 303 | 113 | 3 | 146 | 376 | 370 | 672 | 2.38e-65 | 224 |
| Msa0218620 | AT4G15090.5 | 41.611 | 149 | 61 | 6 | 18 | 145 | 76 | 219 | 3.95e-17 | 84.7 |
| Msa0218620 | AT4G15090.3 | 38.944 | 303 | 113 | 3 | 146 | 376 | 370 | 672 | 2.38e-65 | 224 |
| Msa0218620 | AT4G15090.3 | 41.611 | 149 | 61 | 6 | 18 | 145 | 76 | 219 | 3.95e-17 | 84.7 |
| Msa0218620 | AT4G15090.2 | 38.944 | 303 | 113 | 3 | 146 | 376 | 370 | 672 | 2.38e-65 | 224 |
| Msa0218620 | AT4G15090.2 | 41.611 | 149 | 61 | 6 | 18 | 145 | 76 | 219 | 3.95e-17 | 84.7 |
| Msa0218620 | AT4G15090.4 | 38.944 | 303 | 113 | 3 | 146 | 376 | 370 | 672 | 2.38e-65 | 224 |
| Msa0218620 | AT4G15090.4 | 41.611 | 149 | 61 | 6 | 18 | 145 | 76 | 219 | 3.95e-17 | 84.7 |
| Msa0218620 | AT3G22170.2 | 38.062 | 289 | 106 | 4 | 157 | 373 | 390 | 677 | 4.05e-55 | 196 |
| Msa0218620 | AT3G22170.2 | 38.217 | 157 | 59 | 4 | 18 | 152 | 95 | 235 | 2.20e-18 | 88.6 |
| Msa0218620 | AT3G22170.1 | 38.062 | 289 | 106 | 4 | 157 | 373 | 390 | 677 | 4.05e-55 | 196 |
| Msa0218620 | AT3G22170.1 | 38.217 | 157 | 59 | 4 | 18 | 152 | 95 | 235 | 2.20e-18 | 88.6 |
| Msa0218620 | AT4G19990.6 | 36.601 | 306 | 119 | 4 | 146 | 376 | 318 | 623 | 1.05e-44 | 166 |
| Msa0218620 | AT4G19990.6 | 43.000 | 100 | 33 | 3 | 18 | 94 | 46 | 144 | 1.87e-13 | 73.2 |
| Msa0218620 | AT4G19990.2 | 36.601 | 306 | 119 | 4 | 146 | 376 | 318 | 623 | 1.05e-44 | 166 |
| Msa0218620 | AT4G19990.2 | 43.000 | 100 | 33 | 3 | 18 | 94 | 46 | 144 | 1.87e-13 | 73.2 |
| Msa0218620 | AT4G19990.5 | 36.601 | 306 | 119 | 4 | 146 | 376 | 318 | 623 | 1.46e-44 | 166 |
| Msa0218620 | AT4G19990.5 | 43.000 | 100 | 33 | 3 | 18 | 94 | 46 | 144 | 1.43e-13 | 73.6 |
| Msa0218620 | AT4G19990.3 | 36.601 | 306 | 119 | 4 | 146 | 376 | 318 | 623 | 1.47e-44 | 166 |
| Msa0218620 | AT4G19990.3 | 43.000 | 100 | 33 | 3 | 18 | 94 | 46 | 144 | 1.44e-13 | 73.6 |
| Msa0218620 | AT4G19990.4 | 36.601 | 306 | 119 | 4 | 146 | 376 | 318 | 623 | 1.47e-44 | 166 |
| Msa0218620 | AT4G19990.4 | 43.000 | 100 | 33 | 3 | 18 | 94 | 46 | 144 | 1.44e-13 | 73.6 |
| Msa0218620 | AT4G19990.1 | 36.601 | 306 | 119 | 4 | 146 | 376 | 261 | 566 | 1.78e-44 | 165 |
| Msa0218620 | AT4G19990.7 | 36.601 | 306 | 119 | 4 | 146 | 376 | 332 | 637 | 1.80e-44 | 166 |
| Msa0218620 | AT4G19990.7 | 43.000 | 100 | 33 | 3 | 18 | 94 | 60 | 158 | 1.34e-13 | 73.6 |
| Msa0218620 | AT2G32250.6 | 29.141 | 326 | 151 | 4 | 120 | 373 | 296 | 613 | 4.99e-41 | 156 |
| Msa0218620 | AT2G32250.6 | 51.316 | 76 | 31 | 1 | 18 | 87 | 63 | 138 | 3.72e-17 | 84.7 |
| Msa0218620 | AT2G32250.1 | 29.141 | 326 | 151 | 4 | 120 | 373 | 296 | 613 | 4.99e-41 | 156 |
| Msa0218620 | AT2G32250.1 | 51.316 | 76 | 31 | 1 | 18 | 87 | 63 | 138 | 3.72e-17 | 84.7 |
| Msa0218620 | AT2G32250.3 | 29.141 | 326 | 151 | 4 | 120 | 373 | 296 | 613 | 4.99e-41 | 156 |
| Msa0218620 | AT2G32250.3 | 51.316 | 76 | 31 | 1 | 18 | 87 | 63 | 138 | 3.72e-17 | 84.7 |
| Msa0218620 | AT2G32250.7 | 29.141 | 326 | 151 | 4 | 120 | 373 | 255 | 572 | 4.99e-41 | 156 |
| Msa0218620 | AT2G32250.7 | 51.316 | 76 | 31 | 1 | 18 | 87 | 22 | 97 | 3.91e-17 | 84.7 |
| Msa0218620 | AT2G32250.2 | 29.141 | 326 | 151 | 4 | 120 | 373 | 296 | 613 | 5.15e-41 | 156 |
| Msa0218620 | AT2G32250.2 | 51.316 | 76 | 31 | 1 | 18 | 87 | 63 | 138 | 3.68e-17 | 84.7 |
| Msa0218620 | AT2G32250.4 | 29.141 | 326 | 151 | 4 | 120 | 373 | 296 | 613 | 5.15e-41 | 156 |
| Msa0218620 | AT2G32250.4 | 51.316 | 76 | 31 | 1 | 18 | 87 | 63 | 138 | 3.68e-17 | 84.7 |
| Msa0218620 | AT2G32250.8 | 29.141 | 326 | 151 | 4 | 120 | 373 | 255 | 572 | 5.19e-41 | 156 |
| Msa0218620 | AT2G32250.8 | 51.316 | 76 | 31 | 1 | 18 | 87 | 22 | 97 | 4.16e-17 | 84.3 |
| Msa0218620 | AT2G32250.5 | 29.141 | 326 | 151 | 4 | 120 | 373 | 296 | 613 | 8.72e-41 | 155 |
| Msa0218620 | AT2G32250.5 | 51.316 | 76 | 31 | 1 | 18 | 87 | 63 | 138 | 3.09e-17 | 84.7 |
| Msa0218620 | AT4G38180.1 | 27.632 | 304 | 140 | 5 | 157 | 388 | 405 | 700 | 4.65e-32 | 130 |
| Msa0218620 | AT2G27110.2 | 27.698 | 278 | 134 | 3 | 148 | 358 | 343 | 620 | 9.73e-30 | 123 |
| Msa0218620 | AT2G27110.1 | 27.698 | 278 | 134 | 3 | 148 | 358 | 343 | 620 | 9.73e-30 | 123 |
| Msa0218620 | AT2G27110.3 | 27.698 | 278 | 134 | 3 | 148 | 358 | 198 | 475 | 1.04e-29 | 122 |
| Msa0218620 | AT4G38170.1 | 25.431 | 232 | 106 | 2 | 157 | 321 | 170 | 401 | 1.57e-22 | 100 |
| Msa0218620 | AT3G06250.2 | 27.660 | 235 | 106 | 2 | 148 | 318 | 469 | 703 | 5.05e-20 | 93.6 |
| Msa0218620 | AT3G06250.1 | 27.660 | 235 | 106 | 2 | 148 | 318 | 469 | 703 | 5.05e-20 | 93.6 |
| Msa0218620 | AT3G06250.3 | 27.660 | 235 | 106 | 2 | 148 | 318 | 469 | 703 | 5.05e-20 | 93.6 |
| Msa0218620 | AT1G52520.1 | 29.545 | 176 | 107 | 3 | 146 | 305 | 391 | 565 | 1.23e-19 | 92.4 |
| Msa0218620 | AT5G18960.2 | 27.234 | 235 | 107 | 2 | 148 | 318 | 493 | 727 | 2.90e-18 | 88.2 |
| Msa0218620 | AT5G18960.1 | 27.234 | 235 | 107 | 2 | 148 | 318 | 493 | 727 | 2.90e-18 | 88.2 |
| Msa0218620 | AT1G80010.1 | 29.861 | 144 | 85 | 1 | 158 | 285 | 427 | 570 | 1.73e-17 | 85.5 |
Find 105 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCCATTTCATTATT+AGG | 0.082825 | 2_1:+65895757 | None:intergenic |
| TATGGATTCTTCTATTATTA+TGG | 0.187730 | 2_1:-65895797 | Msa0218620:five_prime_UTR |
| CCTCCATTTAGGTGCAATTA+TGG | 0.201667 | 2_1:-65895815 | Msa0218620:intron |
| CTTCAACATTGCAACCAATA+TGG | 0.212680 | 2_1:+65893910 | None:intergenic |
| ACCTTCTTCACCCAATATTA+TGG | 0.238949 | 2_1:+65894037 | None:intergenic |
| AAAGTTTCAGTTCGAGGTTT+TGG | 0.254700 | 2_1:-65894384 | Msa0218620:CDS |
| CAAATTCCATTTCATTATTA+GGG | 0.256855 | 2_1:+65895758 | None:intergenic |
| TACATGGCATGATAGCTTTA+TGG | 0.278309 | 2_1:-65894804 | Msa0218620:CDS |
| GTTTATGAAGGATATTTCTT+TGG | 0.305630 | 2_1:-65894639 | Msa0218620:CDS |
| ATGAATCGTCAACAAGATAA+AGG | 0.325098 | 2_1:-65895313 | Msa0218620:CDS |
| GATGGTGGAAGCTGGTTGAT+AGG | 0.330003 | 2_1:-65894727 | Msa0218620:CDS |
| AGTTAAGTAGTCGCCGATCT+AGG | 0.332224 | 2_1:-65895669 | Msa0218620:CDS |
| CTTAAGAACTCAAGCTGTTT+CGG | 0.341887 | 2_1:+65894827 | None:intergenic |
| AAGCCATGTAGTAACTTTCT+TGG | 0.341888 | 2_1:+65894006 | None:intergenic |
| GGGGAAGGTGACTTTAATTC+AGG | 0.347918 | 2_1:+65894452 | None:intergenic |
| CCAAGCATCAAAATTTGCTT+TGG | 0.356859 | 2_1:+65894484 | None:intergenic |
| GGTGTAGCTGGTAGGAGTTC+AGG | 0.372841 | 2_1:-65893807 | Msa0218620:CDS |
| AGGAGGTGTTGAAGGAAGTA+AGG | 0.375618 | 2_1:-65893787 | Msa0218620:CDS |
| ACAAGATAAAGGGCGGAGTT+TGG | 0.376984 | 2_1:-65895302 | Msa0218620:intron |
| TGTAGACGAGCCATAATATT+GGG | 0.380324 | 2_1:-65894047 | Msa0218620:CDS |
| GCAGCCTTAGCTACCCATAT+TGG | 0.380779 | 2_1:-65893924 | Msa0218620:CDS |
| TTCAACATTGCAACCAATAT+GGG | 0.390404 | 2_1:+65893911 | None:intergenic |
| GTATCAGAATATTGATTGTT+TGG | 0.395189 | 2_1:-65895344 | Msa0218620:CDS |
| AGGAGTTCAGGAGGTGTTGA+AGG | 0.401164 | 2_1:-65893795 | Msa0218620:CDS |
| ATGTAGACGAGCCATAATAT+TGG | 0.410423 | 2_1:-65894048 | Msa0218620:CDS |
| CCGCGTCCTTCCCCGAAAAT+CGG | 0.414368 | 2_1:-65895568 | Msa0218620:CDS |
| TTAAACTTAGAGATGTTAAG+TGG | 0.419663 | 2_1:-65894703 | Msa0218620:CDS |
| AGAGAAAACAGGATGGTAAA+TGG | 0.421573 | 2_1:-65895522 | Msa0218620:CDS |
| TTGCTTTAGAGCCTCGCTTA+AGG | 0.423117 | 2_1:+65893977 | None:intergenic |
| ATGAAGGATATTTCTTTGGC+TGG | 0.424174 | 2_1:-65894635 | Msa0218620:CDS |
| TCAAGACCCTAATAATGAAA+TGG | 0.426644 | 2_1:-65895764 | Msa0218620:exon |
| AGCCATGTAGTAACTTTCTT+GGG | 0.427360 | 2_1:+65894007 | None:intergenic |
| CTATCAAAAGTTTCAGTTCG+AGG | 0.433567 | 2_1:-65894390 | Msa0218620:CDS |
| CTCTATCTTCAAGAATCAAT+TGG | 0.436835 | 2_1:+65894519 | None:intergenic |
| ATCATTTAATCTCCGGACCT+TGG | 0.446449 | 2_1:+65894073 | None:intergenic |
| TAACCATGGCTTTCAACAAA+TGG | 0.462363 | 2_1:-65893647 | None:intergenic |
| TCAGAGACCTTATCGTTAGA+TGG | 0.469626 | 2_1:+65893867 | None:intergenic |
| ATTGTTGTTCTACAAATGTC+TGG | 0.476184 | 2_1:-65894191 | Msa0218620:CDS |
| GTATCCTATTGGTGAAAACT+TGG | 0.480416 | 2_1:-65894108 | Msa0218620:CDS |
| GTCATATAGGTGCCTCAGCT+TGG | 0.482653 | 2_1:-65893685 | Msa0218620:intron |
| AGTAAGAAGGCTGCAAGGAC+TGG | 0.483811 | 2_1:-65893828 | Msa0218620:CDS |
| ATATGGTAATAAACAACAAT+CGG | 0.483815 | 2_1:-65895605 | Msa0218620:CDS |
| TACATAAATCATTTAATCTC+CGG | 0.485589 | 2_1:+65894066 | None:intergenic |
| GCTGCAAGGACTGGTGTAGC+TGG | 0.488741 | 2_1:-65893819 | Msa0218620:CDS |
| TCTTGAAGATAGAGATGAAG+AGG | 0.488747 | 2_1:-65894510 | Msa0218620:CDS |
| TGAAAAGAGATGGTGGAAGC+TGG | 0.490757 | 2_1:-65894735 | Msa0218620:CDS |
| TATTATACCATCTAACGATA+AGG | 0.493893 | 2_1:-65893874 | Msa0218620:CDS |
| TTGGGTGCCAACGTTTATGA+AGG | 0.495738 | 2_1:-65894651 | Msa0218620:CDS |
| CGGAGGAAGAATTCGACTGC+AGG | 0.496134 | 2_1:-65895388 | Msa0218620:CDS |
| CAAAGTATATATTGAAAAGA+TGG | 0.500276 | 2_1:-65894151 | Msa0218620:CDS |
| ACAAATGTATATATCAATCA+TGG | 0.501166 | 2_1:-65894772 | Msa0218620:CDS |
| GGACGGTTGTTTGTGGCGGC+CGG | 0.502460 | 2_1:+65895947 | None:intergenic |
| CACTACAAGGAGAAAGTGGC+AGG | 0.502522 | 2_1:+65896039 | None:intergenic |
| TGAATCGTCAACAAGATAAA+GGG | 0.505965 | 2_1:-65895312 | Msa0218620:CDS |
| GCTTTAAGTAGGTATCCTAT+TGG | 0.508050 | 2_1:-65894119 | Msa0218620:CDS |
| GTATGATGATCGTGCATGTT+GGG | 0.511716 | 2_1:-65894669 | Msa0218620:CDS |
| GCCATAATATTGGGTGAAGA+AGG | 0.513780 | 2_1:-65894038 | Msa0218620:CDS |
| TATGCATGTGAAGAGAAAAC+AGG | 0.515366 | 2_1:-65895533 | Msa0218620:CDS |
| AGCAATTTGAAAAGAGATGG+TGG | 0.516518 | 2_1:-65894742 | Msa0218620:CDS |
| AGCTTGAGTTCTTAAGTACA+TGG | 0.520700 | 2_1:-65894820 | Msa0218620:CDS |
| AATACCTGGACGGTTGTTTG+TGG | 0.522553 | 2_1:+65895940 | None:intergenic |
| ATACCATTTGTTGAAAGCCA+TGG | 0.528664 | 2_1:+65893644 | None:intergenic |
| ATTCTTTCGATGCCCTAGAT+CGG | 0.531419 | 2_1:+65895656 | None:intergenic |
| AAGAGGTTCAATCCAAGGTC+CGG | 0.533736 | 2_1:-65894085 | Msa0218620:CDS |
| CAACAATTGCATGTCTACAT+AGG | 0.534107 | 2_1:+65894207 | None:intergenic |
| TATTGGTGAAAACTTGGAAG+AGG | 0.534284 | 2_1:-65894102 | Msa0218620:CDS |
| GTTAAGTAGTCGCCGATCTA+GGG | 0.536955 | 2_1:-65895668 | Msa0218620:CDS |
| GAAATATCCTTCATAAACGT+TGG | 0.547589 | 2_1:+65894644 | None:intergenic |
| GTCTTAATGAAGTATCAACT+TGG | 0.551353 | 2_1:+65894558 | None:intergenic |
| GAAAATGAATACGAGTAAGA+AGG | 0.555256 | 2_1:-65893841 | Msa0218620:CDS |
| GGCTTTAGGTTCCTTAAGCG+AGG | 0.555372 | 2_1:-65893988 | Msa0218620:intron |
| GCAACCAATATGGGTAGCTA+AGG | 0.558177 | 2_1:+65893920 | None:intergenic |
| GGAGGTGTTGAAGGAAGTAA+GGG | 0.558225 | 2_1:-65893786 | Msa0218620:CDS |
| CACTGATCTTCTCAACTCCC+CGG | 0.562238 | 2_1:-65895993 | Msa0218620:five_prime_UTR |
| AAGTTGTTTGAGACACTACA+AGG | 0.562837 | 2_1:+65896026 | None:intergenic |
| CAAGGACTGGTGTAGCTGGT+AGG | 0.565226 | 2_1:-65893815 | Msa0218620:CDS |
| GCCGCCACAAACAACCGTCC+AGG | 0.568301 | 2_1:-65895944 | Msa0218620:intron |
| ATACGTTGAGTAATGATGTT+CGG | 0.569177 | 2_1:-65895417 | Msa0218620:CDS |
| CATCACCGGAGTTTGTTCTC+CGG | 0.570864 | 2_1:-65895966 | Msa0218620:five_prime_UTR |
| AACTCCCCGGAAAACATCAC+CGG | 0.571503 | 2_1:-65895980 | Msa0218620:five_prime_UTR |
| CCTCAGCTTGGAGCAGTAAG+TGG | 0.574296 | 2_1:-65893673 | Msa0218620:CDS |
| ACCTGGACGGTTGTTTGTGG+CGG | 0.577315 | 2_1:+65895943 | None:intergenic |
| AAGAATTCGACTGCAGGTGG+TGG | 0.578130 | 2_1:-65895382 | Msa0218620:CDS |
| TGTATGATGATCGTGCATGT+TGG | 0.580054 | 2_1:-65894670 | Msa0218620:CDS |
| GAGACACTACAAGGAGAAAG+TGG | 0.580419 | 2_1:+65896035 | None:intergenic |
| AGGAGCAATTTGAAAAGAGA+TGG | 0.582141 | 2_1:-65894745 | Msa0218620:CDS |
| GGACAAACGTCGCTTTAAGT+AGG | 0.584827 | 2_1:-65894130 | Msa0218620:CDS |
| TAAACTTAGAGATGTTAAGT+GGG | 0.586727 | 2_1:-65894702 | Msa0218620:CDS |
| CTTGGAAGAGGTTCAATCCA+AGG | 0.589927 | 2_1:-65894090 | Msa0218620:CDS |
| CTACAAGGAGAAAGTGGCAG+GGG | 0.606316 | 2_1:+65896041 | None:intergenic |
| TGTTGAAGGAAGTAAGGGAA+AGG | 0.609259 | 2_1:-65893781 | Msa0218620:intron |
| GTAATGATGTTCGGATGAGA+CGG | 0.611128 | 2_1:-65895408 | Msa0218620:CDS |
| GCAGTAAGTGGTAGTAACCA+TGG | 0.616206 | 2_1:-65893661 | Msa0218620:CDS |
| AGGAAGAATTCGACTGCAGG+TGG | 0.619877 | 2_1:-65895385 | Msa0218620:CDS |
| CGGGGAGTTGAGAAGATCAG+TGG | 0.620375 | 2_1:+65895994 | None:intergenic |
| CCACTTACTGCTCCAAGCTG+AGG | 0.628390 | 2_1:+65893673 | None:intergenic |
| GTAGCTGGTAGGAGTTCAGG+AGG | 0.638776 | 2_1:-65893804 | Msa0218620:CDS |
| ACATGCACGATCATCATACA+AGG | 0.650096 | 2_1:+65894673 | None:intergenic |
| GGCGGCCGGAGAACAAACTC+CGG | 0.652729 | 2_1:+65895961 | None:intergenic |
| ATCGTCAACAAGATAAAGGG+CGG | 0.671459 | 2_1:-65895309 | Msa0218620:CDS |
| TATATATCAATCATGGACAG+AGG | 0.673001 | 2_1:-65894765 | Msa0218620:CDS |
| ATACGAGTAAGAAGGCTGCA+AGG | 0.675579 | 2_1:-65893833 | Msa0218620:CDS |
| ACTACAAGGAGAAAGTGGCA+GGG | 0.676924 | 2_1:+65896040 | None:intergenic |
| ATGATGTTCGGATGAGACGG+AGG | 0.681860 | 2_1:-65895405 | Msa0218620:CDS |
| CATGTGAAGAGAAAACAGGA+TGG | 0.699872 | 2_1:-65895529 | Msa0218620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATGATTTTTTTTAGAT+GGG | + | chr2_1:65893850-65893869 | None:intergenic | 10.0% |
| !!! | AAAAAATGATTTTTTTTAGA+TGG | + | chr2_1:65893851-65893870 | None:intergenic | 10.0% |
| !!! | AAAAATGATTTTTTTTAGAT+GGG | + | chr2_1:65893850-65893869 | None:intergenic | 10.0% |
| !!! | AAAAAATGATTTTTTTTAGA+TGG | + | chr2_1:65893851-65893870 | None:intergenic | 10.0% |
| !!! | AAATTTTCATGTATTAGATA+TGG | - | chr2_1:65894103-65894122 | Msa0218620:CDS | 15.0% |
| !!! | AAATTTTCATGTATTAGATA+TGG | - | chr2_1:65894103-65894122 | Msa0218620:CDS | 15.0% |
| !! | ATTTGAAAAAAGTAAATACC+TGG | + | chr2_1:65893802-65893821 | None:intergenic | 20.0% |
| !! | TATGGATTCTTCTATTATTA+TGG | - | chr2_1:65893928-65893947 | Msa0218620:CDS | 20.0% |
| !! | CAAATTCCATTTCATTATTA+GGG | + | chr2_1:65893970-65893989 | None:intergenic | 20.0% |
| !! | TCAAATTCCATTTCATTATT+AGG | + | chr2_1:65893971-65893990 | None:intergenic | 20.0% |
| !! | ATATGGTAATAAACAACAAT+CGG | - | chr2_1:65894120-65894139 | Msa0218620:CDS | 20.0% |
| !!! | GTATGTTTATAGTTTTGTTA+AGG | - | chr2_1:65894225-65894244 | Msa0218620:intron | 20.0% |
| !! | ACAAATGTATATATCAATCA+TGG | - | chr2_1:65894953-65894972 | Msa0218620:intron | 20.0% |
| !!! | CATCTTTTCAATATATACTT+TGG | + | chr2_1:65895576-65895595 | None:intergenic | 20.0% |
| !! | CAAAGTATATATTGAAAAGA+TGG | - | chr2_1:65895574-65895593 | Msa0218620:CDS | 20.0% |
| !! | TACATAAATCATTTAATCTC+CGG | + | chr2_1:65895662-65895681 | None:intergenic | 20.0% |
| !!! | AATTTTAAAATAGTACAAGG+AGG | + | chr2_1:65895997-65896016 | None:intergenic | 20.0% |
| !!! | GACAATTTTAAAATAGTACA+AGG | + | chr2_1:65896000-65896019 | None:intergenic | 20.0% |
| !! | ATTTGAAAAAAGTAAATACC+TGG | + | chr2_1:65893802-65893821 | None:intergenic | 20.0% |
| !! | TATGGATTCTTCTATTATTA+TGG | - | chr2_1:65893928-65893947 | Msa0218620:CDS | 20.0% |
| !! | CAAATTCCATTTCATTATTA+GGG | + | chr2_1:65893970-65893989 | None:intergenic | 20.0% |
| !! | TCAAATTCCATTTCATTATT+AGG | + | chr2_1:65893971-65893990 | None:intergenic | 20.0% |
| !! | ATATGGTAATAAACAACAAT+CGG | - | chr2_1:65894120-65894139 | Msa0218620:CDS | 20.0% |
| !!! | GTATGTTTATAGTTTTGTTA+AGG | - | chr2_1:65894225-65894244 | Msa0218620:intron | 20.0% |
| !! | ACAAATGTATATATCAATCA+TGG | - | chr2_1:65894953-65894972 | Msa0218620:intron | 20.0% |
| !!! | CATCTTTTCAATATATACTT+TGG | + | chr2_1:65895576-65895595 | None:intergenic | 20.0% |
| !! | CAAAGTATATATTGAAAAGA+TGG | - | chr2_1:65895574-65895593 | Msa0218620:CDS | 20.0% |
| !! | TACATAAATCATTTAATCTC+CGG | + | chr2_1:65895662-65895681 | None:intergenic | 20.0% |
| !!! | AATTTTAAAATAGTACAAGG+AGG | + | chr2_1:65895997-65896016 | None:intergenic | 20.0% |
| !!! | GACAATTTTAAAATAGTACA+AGG | + | chr2_1:65896000-65896019 | None:intergenic | 20.0% |
| !! | GTATCAGAATATTGATTGTT+TGG | - | chr2_1:65894381-65894400 | Msa0218620:intron | 25.0% |
| ! | TCAATGGCATAAAAGAATTT+CGG | + | chr2_1:65894511-65894530 | None:intergenic | 25.0% |
| ! | TTAAACTTAGAGATGTTAAG+TGG | - | chr2_1:65895022-65895041 | Msa0218620:intron | 25.0% |
| ! | TAAACTTAGAGATGTTAAGT+GGG | - | chr2_1:65895023-65895042 | Msa0218620:intron | 25.0% |
| ! | GTTTATGAAGGATATTTCTT+TGG | - | chr2_1:65895086-65895105 | Msa0218620:intron | 25.0% |
| !! | CATCATTTTCTTTCTTTAGA+TGG | + | chr2_1:65895380-65895399 | None:intergenic | 25.0% |
| ! | CATCTAAAGAAAGAAAATGA+TGG | - | chr2_1:65895378-65895397 | Msa0218620:CDS | 25.0% |
| ! | TTTATATTCAAACAAGTGAC+AGG | + | chr2_1:65895493-65895512 | None:intergenic | 25.0% |
| !! | TGTCACTTGTTTGAATATAA+AGG | - | chr2_1:65895492-65895511 | Msa0218620:intron | 25.0% |
| !! | TTTTCAATATATACTTTGGC+GGG | + | chr2_1:65895572-65895591 | None:intergenic | 25.0% |
| !! | CTTTTCAATATATACTTTGG+CGG | + | chr2_1:65895573-65895592 | None:intergenic | 25.0% |
| ! | TATTATACCATCTAACGATA+AGG | - | chr2_1:65895851-65895870 | Msa0218620:intron | 25.0% |
| !! | TTCTTACTCGTATTCATTTT+CGG | + | chr2_1:65895885-65895904 | None:intergenic | 25.0% |
| !!! | TTTTAAAATTGTCTCTGACT+TGG | - | chr2_1:65896007-65896026 | Msa0218620:five_prime_UTR | 25.0% |
| !! | GTATCAGAATATTGATTGTT+TGG | - | chr2_1:65894381-65894400 | Msa0218620:intron | 25.0% |
| ! | TCAATGGCATAAAAGAATTT+CGG | + | chr2_1:65894511-65894530 | None:intergenic | 25.0% |
| ! | TTAAACTTAGAGATGTTAAG+TGG | - | chr2_1:65895022-65895041 | Msa0218620:intron | 25.0% |
| ! | TAAACTTAGAGATGTTAAGT+GGG | - | chr2_1:65895023-65895042 | Msa0218620:intron | 25.0% |
| ! | GTTTATGAAGGATATTTCTT+TGG | - | chr2_1:65895086-65895105 | Msa0218620:intron | 25.0% |
| !! | CATCATTTTCTTTCTTTAGA+TGG | + | chr2_1:65895380-65895399 | None:intergenic | 25.0% |
| ! | CATCTAAAGAAAGAAAATGA+TGG | - | chr2_1:65895378-65895397 | Msa0218620:CDS | 25.0% |
| ! | TTTATATTCAAACAAGTGAC+AGG | + | chr2_1:65895493-65895512 | None:intergenic | 25.0% |
| !! | TGTCACTTGTTTGAATATAA+AGG | - | chr2_1:65895492-65895511 | Msa0218620:intron | 25.0% |
| !! | TTTTCAATATATACTTTGGC+GGG | + | chr2_1:65895572-65895591 | None:intergenic | 25.0% |
| !! | CTTTTCAATATATACTTTGG+CGG | + | chr2_1:65895573-65895592 | None:intergenic | 25.0% |
| ! | TATTATACCATCTAACGATA+AGG | - | chr2_1:65895851-65895870 | Msa0218620:intron | 25.0% |
| !! | TTCTTACTCGTATTCATTTT+CGG | + | chr2_1:65895885-65895904 | None:intergenic | 25.0% |
| !!! | TTTTAAAATTGTCTCTGACT+TGG | - | chr2_1:65896007-65896026 | Msa0218620:five_prime_UTR | 25.0% |
| GAAAAAAGTAAATACCTGGA+CGG | + | chr2_1:65893798-65893817 | None:intergenic | 30.0% | |
| AAGTCATTATTCCTCCATTT+AGG | - | chr2_1:65893899-65893918 | Msa0218620:CDS | 30.0% | |
| AATCCATAATTGCACCTAAA+TGG | + | chr2_1:65893916-65893935 | None:intergenic | 30.0% | |
| TCAAGACCCTAATAATGAAA+TGG | - | chr2_1:65893961-65893980 | Msa0218620:CDS | 30.0% | |
| ATACGTTGAGTAATGATGTT+CGG | - | chr2_1:65894308-65894327 | Msa0218620:intron | 30.0% | |
| ATGAATCGTCAACAAGATAA+AGG | - | chr2_1:65894412-65894431 | Msa0218620:CDS | 30.0% | |
| TGAATCGTCAACAAGATAAA+GGG | - | chr2_1:65894413-65894432 | Msa0218620:CDS | 30.0% | |
| TGAATTGTTTATGCATATGC+AGG | - | chr2_1:65894477-65894496 | Msa0218620:CDS | 30.0% | |
| ATGCTCTTCATTCAAATCAA+TGG | + | chr2_1:65894527-65894546 | None:intergenic | 30.0% | |
| ! | TTGATTTGAATGAAGAGCAT+CGG | - | chr2_1:65894527-65894546 | Msa0218620:CDS | 30.0% |
| !! | AGACTGTATTTACTTTTGTG+TGG | - | chr2_1:65894728-65894747 | Msa0218620:CDS | 30.0% |
| !! | CAGCTTTAATAGCATCATTT+TGG | + | chr2_1:65894813-65894832 | None:intergenic | 30.0% |
| !! | TTTTTGTTTGTGGCATGTTT+TGG | - | chr2_1:65894867-65894886 | Msa0218620:intron | 30.0% |
| TATATATCAATCATGGACAG+AGG | - | chr2_1:65894960-65894979 | Msa0218620:intron | 30.0% | |
| GAAATATCCTTCATAAACGT+TGG | + | chr2_1:65895084-65895103 | None:intergenic | 30.0% | |
| ! | GTCTTAATGAAGTATCAACT+TGG | + | chr2_1:65895170-65895189 | None:intergenic | 30.0% |
| CTCTATCTTCAAGAATCAAT+TGG | + | chr2_1:65895209-65895228 | None:intergenic | 30.0% | |
| CGAAAATAATCAGAACTACA+TGG | - | chr2_1:65895431-65895450 | Msa0218620:CDS | 30.0% | |
| ! | ATTGTTGTTCTACAAATGTC+TGG | - | chr2_1:65895534-65895553 | Msa0218620:CDS | 30.0% |
| TTCAACATTGCAACCAATAT+GGG | + | chr2_1:65895817-65895836 | None:intergenic | 30.0% | |
| GAAAATGAATACGAGTAAGA+AGG | - | chr2_1:65895884-65895903 | Msa0218620:intron | 30.0% | |
| TGGCATTCTTTATGTCATAT+AGG | - | chr2_1:65896027-65896046 | Msa0218620:five_prime_UTR | 30.0% | |
| GAAAAAAGTAAATACCTGGA+CGG | + | chr2_1:65893798-65893817 | None:intergenic | 30.0% | |
| AAGTCATTATTCCTCCATTT+AGG | - | chr2_1:65893899-65893918 | Msa0218620:CDS | 30.0% | |
| AATCCATAATTGCACCTAAA+TGG | + | chr2_1:65893916-65893935 | None:intergenic | 30.0% | |
| TCAAGACCCTAATAATGAAA+TGG | - | chr2_1:65893961-65893980 | Msa0218620:CDS | 30.0% | |
| ATACGTTGAGTAATGATGTT+CGG | - | chr2_1:65894308-65894327 | Msa0218620:intron | 30.0% | |
| ATGAATCGTCAACAAGATAA+AGG | - | chr2_1:65894412-65894431 | Msa0218620:CDS | 30.0% | |
| TGAATCGTCAACAAGATAAA+GGG | - | chr2_1:65894413-65894432 | Msa0218620:CDS | 30.0% | |
| TGAATTGTTTATGCATATGC+AGG | - | chr2_1:65894477-65894496 | Msa0218620:CDS | 30.0% | |
| ATGCTCTTCATTCAAATCAA+TGG | + | chr2_1:65894527-65894546 | None:intergenic | 30.0% | |
| ! | TTGATTTGAATGAAGAGCAT+CGG | - | chr2_1:65894527-65894546 | Msa0218620:CDS | 30.0% |
| !! | AGACTGTATTTACTTTTGTG+TGG | - | chr2_1:65894728-65894747 | Msa0218620:CDS | 30.0% |
| !! | CAGCTTTAATAGCATCATTT+TGG | + | chr2_1:65894813-65894832 | None:intergenic | 30.0% |
| !! | TTTTTGTTTGTGGCATGTTT+TGG | - | chr2_1:65894867-65894886 | Msa0218620:intron | 30.0% |
| TATATATCAATCATGGACAG+AGG | - | chr2_1:65894960-65894979 | Msa0218620:intron | 30.0% | |
| GAAATATCCTTCATAAACGT+TGG | + | chr2_1:65895084-65895103 | None:intergenic | 30.0% | |
| ! | GTCTTAATGAAGTATCAACT+TGG | + | chr2_1:65895170-65895189 | None:intergenic | 30.0% |
| CTCTATCTTCAAGAATCAAT+TGG | + | chr2_1:65895209-65895228 | None:intergenic | 30.0% | |
| CGAAAATAATCAGAACTACA+TGG | - | chr2_1:65895431-65895450 | Msa0218620:CDS | 30.0% | |
| ! | ATTGTTGTTCTACAAATGTC+TGG | - | chr2_1:65895534-65895553 | Msa0218620:CDS | 30.0% |
| TTCAACATTGCAACCAATAT+GGG | + | chr2_1:65895817-65895836 | None:intergenic | 30.0% | |
| GAAAATGAATACGAGTAAGA+AGG | - | chr2_1:65895884-65895903 | Msa0218620:intron | 30.0% | |
| TGGCATTCTTTATGTCATAT+AGG | - | chr2_1:65896027-65896046 | Msa0218620:five_prime_UTR | 30.0% | |
| !!! | TTTTTTGGAGCTGTTAAGGT+TGG | + | chr2_1:65893659-65893678 | None:intergenic | 35.0% |
| !!! | TGCATTTTTTGGAGCTGTTA+AGG | + | chr2_1:65893663-65893682 | None:intergenic | 35.0% |
| ! | AAGTTGTTTGAGACACTACA+AGG | + | chr2_1:65893702-65893721 | None:intergenic | 35.0% |
| TGGGATAATTCAAATCACGT+TGG | + | chr2_1:65893831-65893850 | None:intergenic | 35.0% | |
| ! | AAAGAGTATGCAAAATCAGC+AGG | - | chr2_1:65894019-65894038 | Msa0218620:intron | 35.0% |
| ! | AAGAGTATGCAAAATCAGCA+GGG | - | chr2_1:65894020-65894039 | Msa0218620:intron | 35.0% |
| !! | TTGCTTTACAACCGATTTTC+GGG | + | chr2_1:65894171-65894190 | None:intergenic | 35.0% |
| !! | CTTGCTTTACAACCGATTTT+CGG | + | chr2_1:65894172-65894191 | None:intergenic | 35.0% |
| TATGCATGTGAAGAGAAAAC+AGG | - | chr2_1:65894192-65894211 | Msa0218620:CDS | 35.0% | |
| AGAGAAAACAGGATGGTAAA+TGG | - | chr2_1:65894203-65894222 | Msa0218620:CDS | 35.0% | |
| !!! | CTGCTCAAGCTCATTTTTTT+CGG | - | chr2_1:65894269-65894288 | Msa0218620:intron | 35.0% |
| !!! | CTCATTTTTTTCGGAGTCAT+AGG | - | chr2_1:65894278-65894297 | Msa0218620:intron | 35.0% |
| !! | TGTTCTGGGTTGATTCTAAA+GGG | - | chr2_1:65894560-65894579 | Msa0218620:CDS | 35.0% |
| AAGCAAGTATAAGATACCGT+TGG | - | chr2_1:65894639-65894658 | Msa0218620:CDS | 35.0% | |
| ! | CAAACATGGTTTGTAGCAAT+GGG | - | chr2_1:65894757-65894776 | Msa0218620:CDS | 35.0% |
| ! | AAACATGGTTTGTAGCAATG+GGG | - | chr2_1:65894758-65894777 | Msa0218620:CDS | 35.0% |
| ACAAAAACAATGACGTGTTC+CGG | + | chr2_1:65894854-65894873 | None:intergenic | 35.0% | |
| !!! | CACGTCATTGTTTTTGTTTG+TGG | - | chr2_1:65894857-65894876 | Msa0218620:intron | 35.0% |
| CTTAAGAACTCAAGCTGTTT+CGG | + | chr2_1:65894901-65894920 | None:intergenic | 35.0% | |
| AGCTTGAGTTCTTAAGTACA+TGG | - | chr2_1:65894905-65894924 | Msa0218620:intron | 35.0% | |
| ! | TACATGGCATGATAGCTTTA+TGG | - | chr2_1:65894921-65894940 | Msa0218620:intron | 35.0% |
| AGGAGCAATTTGAAAAGAGA+TGG | - | chr2_1:65894980-65894999 | Msa0218620:intron | 35.0% | |
| AGCAATTTGAAAAGAGATGG+TGG | - | chr2_1:65894983-65895002 | Msa0218620:intron | 35.0% | |
| ATGAAGGATATTTCTTTGGC+TGG | - | chr2_1:65895090-65895109 | Msa0218620:intron | 35.0% | |
| TCTTGAAGATAGAGATGAAG+AGG | - | chr2_1:65895215-65895234 | Msa0218620:intron | 35.0% | |
| ! | CCAAGCATCAAAATTTGCTT+TGG | + | chr2_1:65895244-65895263 | None:intergenic | 35.0% |
| !! | CCAAAGCAAATTTTGATGCT+TGG | - | chr2_1:65895241-65895260 | Msa0218620:intron | 35.0% |
| !!! | ACAGCAGTTGTTTTTCGAAA+GGG | + | chr2_1:65895296-65895315 | None:intergenic | 35.0% |
| !!! | AACAGCAGTTGTTTTTCGAA+AGG | + | chr2_1:65895297-65895316 | None:intergenic | 35.0% |
| CTATCAAAAGTTTCAGTTCG+AGG | - | chr2_1:65895335-65895354 | Msa0218620:CDS | 35.0% | |
| ! | AAAGTTTCAGTTCGAGGTTT+TGG | - | chr2_1:65895341-65895360 | Msa0218620:CDS | 35.0% |
| ! | AAGTTTCAGTTCGAGGTTTT+GGG | - | chr2_1:65895342-65895361 | Msa0218620:CDS | 35.0% |
| ATCAGAACTACATGGTAGAA+TGG | - | chr2_1:65895439-65895458 | Msa0218620:CDS | 35.0% | |
| AGAATGGAACACATCAAACT+CGG | - | chr2_1:65895455-65895474 | Msa0218620:CDS | 35.0% | |
| CAACAATTGCATGTCTACAT+AGG | + | chr2_1:65895521-65895540 | None:intergenic | 35.0% | |
| ! | GCTTTAAGTAGGTATCCTAT+TGG | - | chr2_1:65895606-65895625 | Msa0218620:CDS | 35.0% |
| GTATCCTATTGGTGAAAACT+TGG | - | chr2_1:65895617-65895636 | Msa0218620:CDS | 35.0% | |
| ! | TCTTCCAAGTTTTCACCAAT+AGG | + | chr2_1:65895624-65895643 | None:intergenic | 35.0% |
| TATTGGTGAAAACTTGGAAG+AGG | - | chr2_1:65895623-65895642 | Msa0218620:CDS | 35.0% | |
| ATGTAGACGAGCCATAATAT+TGG | - | chr2_1:65895677-65895696 | Msa0218620:CDS | 35.0% | |
| TGTAGACGAGCCATAATATT+GGG | - | chr2_1:65895678-65895697 | Msa0218620:CDS | 35.0% | |
| ACCTTCTTCACCCAATATTA+TGG | + | chr2_1:65895691-65895710 | None:intergenic | 35.0% | |
| ATCCCAAGAAAGTTACTACA+TGG | - | chr2_1:65895716-65895735 | Msa0218620:intron | 35.0% | |
| AGCCATGTAGTAACTTTCTT+GGG | + | chr2_1:65895721-65895740 | None:intergenic | 35.0% | |
| AAGCCATGTAGTAACTTTCT+TGG | + | chr2_1:65895722-65895741 | None:intergenic | 35.0% | |
| GAAAGTTACTACATGGCTTT+AGG | - | chr2_1:65895723-65895742 | Msa0218620:intron | 35.0% | |
| CTTCAACATTGCAACCAATA+TGG | + | chr2_1:65895818-65895837 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGAGCTGTTAAGGT+TGG | + | chr2_1:65893659-65893678 | None:intergenic | 35.0% |
| !!! | TGCATTTTTTGGAGCTGTTA+AGG | + | chr2_1:65893663-65893682 | None:intergenic | 35.0% |
| ! | AAGTTGTTTGAGACACTACA+AGG | + | chr2_1:65893702-65893721 | None:intergenic | 35.0% |
| TGGGATAATTCAAATCACGT+TGG | + | chr2_1:65893831-65893850 | None:intergenic | 35.0% | |
| ! | AAAGAGTATGCAAAATCAGC+AGG | - | chr2_1:65894019-65894038 | Msa0218620:intron | 35.0% |
| ! | AAGAGTATGCAAAATCAGCA+GGG | - | chr2_1:65894020-65894039 | Msa0218620:intron | 35.0% |
| !! | TTGCTTTACAACCGATTTTC+GGG | + | chr2_1:65894171-65894190 | None:intergenic | 35.0% |
| !! | CTTGCTTTACAACCGATTTT+CGG | + | chr2_1:65894172-65894191 | None:intergenic | 35.0% |
| TATGCATGTGAAGAGAAAAC+AGG | - | chr2_1:65894192-65894211 | Msa0218620:CDS | 35.0% | |
| AGAGAAAACAGGATGGTAAA+TGG | - | chr2_1:65894203-65894222 | Msa0218620:CDS | 35.0% | |
| !!! | CTGCTCAAGCTCATTTTTTT+CGG | - | chr2_1:65894269-65894288 | Msa0218620:intron | 35.0% |
| !!! | CTCATTTTTTTCGGAGTCAT+AGG | - | chr2_1:65894278-65894297 | Msa0218620:intron | 35.0% |
| !! | TGTTCTGGGTTGATTCTAAA+GGG | - | chr2_1:65894560-65894579 | Msa0218620:CDS | 35.0% |
| AAGCAAGTATAAGATACCGT+TGG | - | chr2_1:65894639-65894658 | Msa0218620:CDS | 35.0% | |
| ! | CAAACATGGTTTGTAGCAAT+GGG | - | chr2_1:65894757-65894776 | Msa0218620:CDS | 35.0% |
| ! | AAACATGGTTTGTAGCAATG+GGG | - | chr2_1:65894758-65894777 | Msa0218620:CDS | 35.0% |
| ACAAAAACAATGACGTGTTC+CGG | + | chr2_1:65894854-65894873 | None:intergenic | 35.0% | |
| !!! | CACGTCATTGTTTTTGTTTG+TGG | - | chr2_1:65894857-65894876 | Msa0218620:intron | 35.0% |
| CTTAAGAACTCAAGCTGTTT+CGG | + | chr2_1:65894901-65894920 | None:intergenic | 35.0% | |
| AGCTTGAGTTCTTAAGTACA+TGG | - | chr2_1:65894905-65894924 | Msa0218620:intron | 35.0% | |
| ! | TACATGGCATGATAGCTTTA+TGG | - | chr2_1:65894921-65894940 | Msa0218620:intron | 35.0% |
| AGGAGCAATTTGAAAAGAGA+TGG | - | chr2_1:65894980-65894999 | Msa0218620:intron | 35.0% | |
| AGCAATTTGAAAAGAGATGG+TGG | - | chr2_1:65894983-65895002 | Msa0218620:intron | 35.0% | |
| ATGAAGGATATTTCTTTGGC+TGG | - | chr2_1:65895090-65895109 | Msa0218620:intron | 35.0% | |
| TCTTGAAGATAGAGATGAAG+AGG | - | chr2_1:65895215-65895234 | Msa0218620:intron | 35.0% | |
| ! | CCAAGCATCAAAATTTGCTT+TGG | + | chr2_1:65895244-65895263 | None:intergenic | 35.0% |
| !! | CCAAAGCAAATTTTGATGCT+TGG | - | chr2_1:65895241-65895260 | Msa0218620:intron | 35.0% |
| !!! | ACAGCAGTTGTTTTTCGAAA+GGG | + | chr2_1:65895296-65895315 | None:intergenic | 35.0% |
| !!! | AACAGCAGTTGTTTTTCGAA+AGG | + | chr2_1:65895297-65895316 | None:intergenic | 35.0% |
| CTATCAAAAGTTTCAGTTCG+AGG | - | chr2_1:65895335-65895354 | Msa0218620:CDS | 35.0% | |
| ! | AAAGTTTCAGTTCGAGGTTT+TGG | - | chr2_1:65895341-65895360 | Msa0218620:CDS | 35.0% |
| ! | AAGTTTCAGTTCGAGGTTTT+GGG | - | chr2_1:65895342-65895361 | Msa0218620:CDS | 35.0% |
| ATCAGAACTACATGGTAGAA+TGG | - | chr2_1:65895439-65895458 | Msa0218620:CDS | 35.0% | |
| AGAATGGAACACATCAAACT+CGG | - | chr2_1:65895455-65895474 | Msa0218620:CDS | 35.0% | |
| CAACAATTGCATGTCTACAT+AGG | + | chr2_1:65895521-65895540 | None:intergenic | 35.0% | |
| ! | GCTTTAAGTAGGTATCCTAT+TGG | - | chr2_1:65895606-65895625 | Msa0218620:CDS | 35.0% |
| GTATCCTATTGGTGAAAACT+TGG | - | chr2_1:65895617-65895636 | Msa0218620:CDS | 35.0% | |
| ! | TCTTCCAAGTTTTCACCAAT+AGG | + | chr2_1:65895624-65895643 | None:intergenic | 35.0% |
| TATTGGTGAAAACTTGGAAG+AGG | - | chr2_1:65895623-65895642 | Msa0218620:CDS | 35.0% | |
| ATGTAGACGAGCCATAATAT+TGG | - | chr2_1:65895677-65895696 | Msa0218620:CDS | 35.0% | |
| TGTAGACGAGCCATAATATT+GGG | - | chr2_1:65895678-65895697 | Msa0218620:CDS | 35.0% | |
| ACCTTCTTCACCCAATATTA+TGG | + | chr2_1:65895691-65895710 | None:intergenic | 35.0% | |
| ATCCCAAGAAAGTTACTACA+TGG | - | chr2_1:65895716-65895735 | Msa0218620:intron | 35.0% | |
| AGCCATGTAGTAACTTTCTT+GGG | + | chr2_1:65895721-65895740 | None:intergenic | 35.0% | |
| AAGCCATGTAGTAACTTTCT+TGG | + | chr2_1:65895722-65895741 | None:intergenic | 35.0% | |
| GAAAGTTACTACATGGCTTT+AGG | - | chr2_1:65895723-65895742 | Msa0218620:intron | 35.0% | |
| CTTCAACATTGCAACCAATA+TGG | + | chr2_1:65895818-65895837 | None:intergenic | 35.0% | |
| CCATAATTGCACCTAAATGG+AGG | + | chr2_1:65893913-65893932 | None:intergenic | 40.0% | |
| CCTCCATTTAGGTGCAATTA+TGG | - | chr2_1:65893910-65893929 | Msa0218620:CDS | 40.0% | |
| TATGCAAAATCAGCAGGGTT+TGG | - | chr2_1:65894025-65894044 | Msa0218620:CDS | 40.0% | |
| ATTCTTTCGATGCCCTAGAT+CGG | + | chr2_1:65894072-65894091 | None:intergenic | 40.0% | |
| !! | TGCTTTACAACCGATTTTCG+GGG | + | chr2_1:65894170-65894189 | None:intergenic | 40.0% |
| CATGTGAAGAGAAAACAGGA+TGG | - | chr2_1:65894196-65894215 | Msa0218620:CDS | 40.0% | |
| CGAAAAAAATGAGCTTGAGC+AGG | + | chr2_1:65894271-65894290 | None:intergenic | 40.0% | |
| GTAATGATGTTCGGATGAGA+CGG | - | chr2_1:65894317-65894336 | Msa0218620:intron | 40.0% | |
| ATCGTCAACAAGATAAAGGG+CGG | - | chr2_1:65894416-65894435 | Msa0218620:CDS | 40.0% | |
| ! | ATCGGCTTAGAAATGTGTTC+TGG | - | chr2_1:65894545-65894564 | Msa0218620:CDS | 40.0% |
| TCGGCTTAGAAATGTGTTCT+GGG | - | chr2_1:65894546-65894565 | Msa0218620:CDS | 40.0% | |
| !! | GTGTTCTGGGTTGATTCTAA+AGG | - | chr2_1:65894559-65894578 | Msa0218620:CDS | 40.0% |
| ! | TCTAAAGGGTTGGAGGATTT+TGG | - | chr2_1:65894574-65894593 | Msa0218620:intron | 40.0% |
| !! | ATACCGTTGGTGCTTTTTGT+TGG | - | chr2_1:65894652-65894671 | Msa0218620:CDS | 40.0% |
| !! | ACTCCAACAAAAAGCACCAA+CGG | + | chr2_1:65894658-65894677 | None:intergenic | 40.0% |
| ! | GCAATGTTGGTTGAACATGA+TGG | + | chr2_1:65894684-65894703 | None:intergenic | 40.0% |
| CATGTTCAACCAACATTGCT+TGG | - | chr2_1:65894685-65894704 | Msa0218620:CDS | 40.0% | |
| AATGCACATCCAAGCAATGT+TGG | + | chr2_1:65894697-65894716 | None:intergenic | 40.0% | |
| ! | GCAAACATGGTTTGTAGCAA+TGG | - | chr2_1:65894756-65894775 | Msa0218620:CDS | 40.0% |
| ! | AACATGGTTTGTAGCAATGG+GGG | - | chr2_1:65894759-65894778 | Msa0218620:CDS | 40.0% |
| CAAAAACAATGACGTGTTCC+GGG | + | chr2_1:65894853-65894872 | None:intergenic | 40.0% | |
| ACATGCACGATCATCATACA+AGG | + | chr2_1:65895055-65895074 | None:intergenic | 40.0% | |
| TGTATGATGATCGTGCATGT+TGG | - | chr2_1:65895055-65895074 | Msa0218620:intron | 40.0% | |
| GTATGATGATCGTGCATGTT+GGG | - | chr2_1:65895056-65895075 | Msa0218620:intron | 40.0% | |
| !!! | AGTTGTTTTTCGAAAGGGGA+AGG | + | chr2_1:65895291-65895310 | None:intergenic | 40.0% |
| !!! | CAGCAGTTGTTTTTCGAAAG+GGG | + | chr2_1:65895295-65895314 | None:intergenic | 40.0% |
| TTCAAACAAGTGACAGGAAC+AGG | + | chr2_1:65895487-65895506 | None:intergenic | 40.0% | |
| ATCATTTAATCTCCGGACCT+TGG | + | chr2_1:65895655-65895674 | None:intergenic | 40.0% | |
| GCCATAATATTGGGTGAAGA+AGG | - | chr2_1:65895687-65895706 | Msa0218620:CDS | 40.0% | |
| TCAGAGACCTTATCGTTAGA+TGG | + | chr2_1:65895861-65895880 | None:intergenic | 40.0% | |
| TGTTGAAGGAAGTAAGGGAA+AGG | - | chr2_1:65895944-65895963 | Msa0218620:intron | 40.0% | |
| CCATAATTGCACCTAAATGG+AGG | + | chr2_1:65893913-65893932 | None:intergenic | 40.0% | |
| CCTCCATTTAGGTGCAATTA+TGG | - | chr2_1:65893910-65893929 | Msa0218620:CDS | 40.0% | |
| TATGCAAAATCAGCAGGGTT+TGG | - | chr2_1:65894025-65894044 | Msa0218620:CDS | 40.0% | |
| ATTCTTTCGATGCCCTAGAT+CGG | + | chr2_1:65894072-65894091 | None:intergenic | 40.0% | |
| !! | TGCTTTACAACCGATTTTCG+GGG | + | chr2_1:65894170-65894189 | None:intergenic | 40.0% |
| CATGTGAAGAGAAAACAGGA+TGG | - | chr2_1:65894196-65894215 | Msa0218620:CDS | 40.0% | |
| CGAAAAAAATGAGCTTGAGC+AGG | + | chr2_1:65894271-65894290 | None:intergenic | 40.0% | |
| GTAATGATGTTCGGATGAGA+CGG | - | chr2_1:65894317-65894336 | Msa0218620:intron | 40.0% | |
| ATCGTCAACAAGATAAAGGG+CGG | - | chr2_1:65894416-65894435 | Msa0218620:CDS | 40.0% | |
| ! | ATCGGCTTAGAAATGTGTTC+TGG | - | chr2_1:65894545-65894564 | Msa0218620:CDS | 40.0% |
| TCGGCTTAGAAATGTGTTCT+GGG | - | chr2_1:65894546-65894565 | Msa0218620:CDS | 40.0% | |
| !! | GTGTTCTGGGTTGATTCTAA+AGG | - | chr2_1:65894559-65894578 | Msa0218620:CDS | 40.0% |
| ! | TCTAAAGGGTTGGAGGATTT+TGG | - | chr2_1:65894574-65894593 | Msa0218620:intron | 40.0% |
| !! | ATACCGTTGGTGCTTTTTGT+TGG | - | chr2_1:65894652-65894671 | Msa0218620:CDS | 40.0% |
| !! | ACTCCAACAAAAAGCACCAA+CGG | + | chr2_1:65894658-65894677 | None:intergenic | 40.0% |
| ! | GCAATGTTGGTTGAACATGA+TGG | + | chr2_1:65894684-65894703 | None:intergenic | 40.0% |
| CATGTTCAACCAACATTGCT+TGG | - | chr2_1:65894685-65894704 | Msa0218620:CDS | 40.0% | |
| AATGCACATCCAAGCAATGT+TGG | + | chr2_1:65894697-65894716 | None:intergenic | 40.0% | |
| ! | GCAAACATGGTTTGTAGCAA+TGG | - | chr2_1:65894756-65894775 | Msa0218620:CDS | 40.0% |
| ! | AACATGGTTTGTAGCAATGG+GGG | - | chr2_1:65894759-65894778 | Msa0218620:CDS | 40.0% |
| CAAAAACAATGACGTGTTCC+GGG | + | chr2_1:65894853-65894872 | None:intergenic | 40.0% | |
| ACATGCACGATCATCATACA+AGG | + | chr2_1:65895055-65895074 | None:intergenic | 40.0% | |
| TGTATGATGATCGTGCATGT+TGG | - | chr2_1:65895055-65895074 | Msa0218620:intron | 40.0% | |
| GTATGATGATCGTGCATGTT+GGG | - | chr2_1:65895056-65895075 | Msa0218620:intron | 40.0% | |
| !!! | AGTTGTTTTTCGAAAGGGGA+AGG | + | chr2_1:65895291-65895310 | None:intergenic | 40.0% |
| !!! | CAGCAGTTGTTTTTCGAAAG+GGG | + | chr2_1:65895295-65895314 | None:intergenic | 40.0% |
| TTCAAACAAGTGACAGGAAC+AGG | + | chr2_1:65895487-65895506 | None:intergenic | 40.0% | |
| ATCATTTAATCTCCGGACCT+TGG | + | chr2_1:65895655-65895674 | None:intergenic | 40.0% | |
| GCCATAATATTGGGTGAAGA+AGG | - | chr2_1:65895687-65895706 | Msa0218620:CDS | 40.0% | |
| TCAGAGACCTTATCGTTAGA+TGG | + | chr2_1:65895861-65895880 | None:intergenic | 40.0% | |
| TGTTGAAGGAAGTAAGGGAA+AGG | - | chr2_1:65895944-65895963 | Msa0218620:intron | 40.0% | |
| ACTACAAGGAGAAAGTGGCA+GGG | + | chr2_1:65893688-65893707 | None:intergenic | 45.0% | |
| GAGACACTACAAGGAGAAAG+TGG | + | chr2_1:65893693-65893712 | None:intergenic | 45.0% | |
| ! | AAACTCCGGTGATGTTTTCC+GGG | + | chr2_1:65893753-65893772 | None:intergenic | 45.0% |
| ! | CAAACTCCGGTGATGTTTTC+CGG | + | chr2_1:65893754-65893773 | None:intergenic | 45.0% |
| AATACCTGGACGGTTGTTTG+TGG | + | chr2_1:65893788-65893807 | None:intergenic | 45.0% | |
| AGTTAAGTAGTCGCCGATCT+AGG | - | chr2_1:65894056-65894075 | Msa0218620:CDS | 45.0% | |
| GTTAAGTAGTCGCCGATCTA+GGG | - | chr2_1:65894057-65894076 | Msa0218620:CDS | 45.0% | |
| !! | TTACAACCGATTTTCGGGGA+AGG | + | chr2_1:65894166-65894185 | None:intergenic | 45.0% |
| ACAAGATAAAGGGCGGAGTT+TGG | - | chr2_1:65894423-65894442 | Msa0218620:CDS | 45.0% | |
| !!! | GCGGAGTTTGGTTTTAGAAC+CGG | - | chr2_1:65894435-65894454 | Msa0218620:CDS | 45.0% |
| !!! | CGGAGTTTGGTTTTAGAACC+GGG | - | chr2_1:65894436-65894455 | Msa0218620:CDS | 45.0% |
| !!! | GGAGTTTGGTTTTAGAACCG+GGG | - | chr2_1:65894437-65894456 | Msa0218620:CDS | 45.0% |
| AGAAGCAATTGAGCATTCCC+CGG | + | chr2_1:65894457-65894476 | None:intergenic | 45.0% | |
| !! | CTGGGTTGATTCTAAAGGGT+TGG | - | chr2_1:65894564-65894583 | Msa0218620:CDS | 45.0% |
| ! | GGTTGATTCTAAAGGGTTGG+AGG | - | chr2_1:65894567-65894586 | Msa0218620:CDS | 45.0% |
| TTGTGTGGCTACTGCAAACA+TGG | - | chr2_1:65894743-65894762 | Msa0218620:CDS | 45.0% | |
| TGGTCAGTTAGAATCACCTG+CGG | + | chr2_1:65894793-65894812 | None:intergenic | 45.0% | |
| !! | TGAAAAGAGATGGTGGAAGC+TGG | - | chr2_1:65894990-65895009 | Msa0218620:intron | 45.0% |
| TTGGGTGCCAACGTTTATGA+AGG | - | chr2_1:65895074-65895093 | Msa0218620:intron | 45.0% | |
| TAAACTTTCAAAGCGCGAGC+CGG | + | chr2_1:65895124-65895143 | None:intergenic | 45.0% | |
| GGGGAAGGTGACTTTAATTC+AGG | + | chr2_1:65895276-65895295 | None:intergenic | 45.0% | |
| ! | GGACAAACGTCGCTTTAAGT+AGG | - | chr2_1:65895595-65895614 | Msa0218620:CDS | 45.0% |
| CTTGGAAGAGGTTCAATCCA+AGG | - | chr2_1:65895635-65895654 | Msa0218620:CDS | 45.0% | |
| AAGAGGTTCAATCCAAGGTC+CGG | - | chr2_1:65895640-65895659 | Msa0218620:CDS | 45.0% | |
| !! | TTGCTTTAGAGCCTCGCTTA+AGG | + | chr2_1:65895751-65895770 | None:intergenic | 45.0% |
| GCAACCAATATGGGTAGCTA+AGG | + | chr2_1:65895808-65895827 | None:intergenic | 45.0% | |
| ATACGAGTAAGAAGGCTGCA+AGG | - | chr2_1:65895892-65895911 | Msa0218620:intron | 45.0% | |
| !! | AGGAGGTGTTGAAGGAAGTA+AGG | - | chr2_1:65895938-65895957 | Msa0218620:intron | 45.0% |
| !! | GGAGGTGTTGAAGGAAGTAA+GGG | - | chr2_1:65895939-65895958 | Msa0218620:intron | 45.0% |
| GAAGGAAGTAAGGGAAAGGT+TGG | - | chr2_1:65895948-65895967 | Msa0218620:five_prime_UTR | 45.0% | |
| GCAGTAAGTGGTAGTAACCA+TGG | - | chr2_1:65896064-65896083 | Msa0218620:five_prime_UTR | 45.0% | |
| ACTACAAGGAGAAAGTGGCA+GGG | + | chr2_1:65893688-65893707 | None:intergenic | 45.0% | |
| GAGACACTACAAGGAGAAAG+TGG | + | chr2_1:65893693-65893712 | None:intergenic | 45.0% | |
| ! | AAACTCCGGTGATGTTTTCC+GGG | + | chr2_1:65893753-65893772 | None:intergenic | 45.0% |
| ! | CAAACTCCGGTGATGTTTTC+CGG | + | chr2_1:65893754-65893773 | None:intergenic | 45.0% |
| AATACCTGGACGGTTGTTTG+TGG | + | chr2_1:65893788-65893807 | None:intergenic | 45.0% | |
| AGTTAAGTAGTCGCCGATCT+AGG | - | chr2_1:65894056-65894075 | Msa0218620:CDS | 45.0% | |
| GTTAAGTAGTCGCCGATCTA+GGG | - | chr2_1:65894057-65894076 | Msa0218620:CDS | 45.0% | |
| !! | TTACAACCGATTTTCGGGGA+AGG | + | chr2_1:65894166-65894185 | None:intergenic | 45.0% |
| ACAAGATAAAGGGCGGAGTT+TGG | - | chr2_1:65894423-65894442 | Msa0218620:CDS | 45.0% | |
| !!! | GCGGAGTTTGGTTTTAGAAC+CGG | - | chr2_1:65894435-65894454 | Msa0218620:CDS | 45.0% |
| !!! | CGGAGTTTGGTTTTAGAACC+GGG | - | chr2_1:65894436-65894455 | Msa0218620:CDS | 45.0% |
| !!! | GGAGTTTGGTTTTAGAACCG+GGG | - | chr2_1:65894437-65894456 | Msa0218620:CDS | 45.0% |
| AGAAGCAATTGAGCATTCCC+CGG | + | chr2_1:65894457-65894476 | None:intergenic | 45.0% | |
| !! | CTGGGTTGATTCTAAAGGGT+TGG | - | chr2_1:65894564-65894583 | Msa0218620:CDS | 45.0% |
| ! | GGTTGATTCTAAAGGGTTGG+AGG | - | chr2_1:65894567-65894586 | Msa0218620:CDS | 45.0% |
| TTGTGTGGCTACTGCAAACA+TGG | - | chr2_1:65894743-65894762 | Msa0218620:CDS | 45.0% | |
| TGGTCAGTTAGAATCACCTG+CGG | + | chr2_1:65894793-65894812 | None:intergenic | 45.0% | |
| !! | TGAAAAGAGATGGTGGAAGC+TGG | - | chr2_1:65894990-65895009 | Msa0218620:intron | 45.0% |
| TTGGGTGCCAACGTTTATGA+AGG | - | chr2_1:65895074-65895093 | Msa0218620:intron | 45.0% | |
| TAAACTTTCAAAGCGCGAGC+CGG | + | chr2_1:65895124-65895143 | None:intergenic | 45.0% | |
| GGGGAAGGTGACTTTAATTC+AGG | + | chr2_1:65895276-65895295 | None:intergenic | 45.0% | |
| ! | GGACAAACGTCGCTTTAAGT+AGG | - | chr2_1:65895595-65895614 | Msa0218620:CDS | 45.0% |
| CTTGGAAGAGGTTCAATCCA+AGG | - | chr2_1:65895635-65895654 | Msa0218620:CDS | 45.0% | |
| AAGAGGTTCAATCCAAGGTC+CGG | - | chr2_1:65895640-65895659 | Msa0218620:CDS | 45.0% | |
| !! | TTGCTTTAGAGCCTCGCTTA+AGG | + | chr2_1:65895751-65895770 | None:intergenic | 45.0% |
| GCAACCAATATGGGTAGCTA+AGG | + | chr2_1:65895808-65895827 | None:intergenic | 45.0% | |
| ATACGAGTAAGAAGGCTGCA+AGG | - | chr2_1:65895892-65895911 | Msa0218620:intron | 45.0% | |
| !! | AGGAGGTGTTGAAGGAAGTA+AGG | - | chr2_1:65895938-65895957 | Msa0218620:intron | 45.0% |
| !! | GGAGGTGTTGAAGGAAGTAA+GGG | - | chr2_1:65895939-65895958 | Msa0218620:intron | 45.0% |
| GAAGGAAGTAAGGGAAAGGT+TGG | - | chr2_1:65895948-65895967 | Msa0218620:five_prime_UTR | 45.0% | |
| GCAGTAAGTGGTAGTAACCA+TGG | - | chr2_1:65896064-65896083 | Msa0218620:five_prime_UTR | 45.0% | |
| CTACAAGGAGAAAGTGGCAG+GGG | + | chr2_1:65893687-65893706 | None:intergenic | 50.0% | |
| CACTACAAGGAGAAAGTGGC+AGG | + | chr2_1:65893689-65893708 | None:intergenic | 50.0% | |
| CACTGATCTTCTCAACTCCC+CGG | - | chr2_1:65893732-65893751 | Msa0218620:intron | 50.0% | |
| AACTCCCCGGAAAACATCAC+CGG | - | chr2_1:65893745-65893764 | Msa0218620:intron | 50.0% | |
| ! | AACTCCGGTGATGTTTTCCG+GGG | + | chr2_1:65893752-65893771 | None:intergenic | 50.0% |
| ! | CATCACCGGAGTTTGTTCTC+CGG | - | chr2_1:65893759-65893778 | Msa0218620:intron | 50.0% |
| ATGATGTTCGGATGAGACGG+AGG | - | chr2_1:65894320-65894339 | Msa0218620:intron | 50.0% | |
| AGGAAGAATTCGACTGCAGG+TGG | - | chr2_1:65894340-65894359 | Msa0218620:intron | 50.0% | |
| AAGAATTCGACTGCAGGTGG+TGG | - | chr2_1:65894343-65894362 | Msa0218620:intron | 50.0% | |
| !! | GATGGTGGAAGCTGGTTGAT+AGG | - | chr2_1:65894998-65895017 | Msa0218620:intron | 50.0% |
| !! | TCTTTGGCTGGCTTGTCTAC+CGG | - | chr2_1:65895102-65895121 | Msa0218620:intron | 50.0% |
| !! | GGCTTTAGGTTCCTTAAGCG+AGG | - | chr2_1:65895737-65895756 | Msa0218620:CDS | 50.0% |
| GCAGCCTTAGCTACCCATAT+TGG | - | chr2_1:65895801-65895820 | Msa0218620:five_prime_UTR | 50.0% | |
| AGTAAGAAGGCTGCAAGGAC+TGG | - | chr2_1:65895897-65895916 | Msa0218620:intron | 50.0% | |
| !! | AGGAGTTCAGGAGGTGTTGA+AGG | - | chr2_1:65895930-65895949 | Msa0218620:intron | 50.0% |
| GTCATATAGGTGCCTCAGCT+TGG | - | chr2_1:65896040-65896059 | Msa0218620:five_prime_UTR | 50.0% | |
| CTACAAGGAGAAAGTGGCAG+GGG | + | chr2_1:65893687-65893706 | None:intergenic | 50.0% | |
| CACTACAAGGAGAAAGTGGC+AGG | + | chr2_1:65893689-65893708 | None:intergenic | 50.0% | |
| CACTGATCTTCTCAACTCCC+CGG | - | chr2_1:65893732-65893751 | Msa0218620:intron | 50.0% | |
| AACTCCCCGGAAAACATCAC+CGG | - | chr2_1:65893745-65893764 | Msa0218620:intron | 50.0% | |
| ! | AACTCCGGTGATGTTTTCCG+GGG | + | chr2_1:65893752-65893771 | None:intergenic | 50.0% |
| ! | CATCACCGGAGTTTGTTCTC+CGG | - | chr2_1:65893759-65893778 | Msa0218620:intron | 50.0% |
| ATGATGTTCGGATGAGACGG+AGG | - | chr2_1:65894320-65894339 | Msa0218620:intron | 50.0% | |
| AGGAAGAATTCGACTGCAGG+TGG | - | chr2_1:65894340-65894359 | Msa0218620:intron | 50.0% | |
| AAGAATTCGACTGCAGGTGG+TGG | - | chr2_1:65894343-65894362 | Msa0218620:intron | 50.0% | |
| !! | GATGGTGGAAGCTGGTTGAT+AGG | - | chr2_1:65894998-65895017 | Msa0218620:intron | 50.0% |
| !! | TCTTTGGCTGGCTTGTCTAC+CGG | - | chr2_1:65895102-65895121 | Msa0218620:intron | 50.0% |
| !! | GGCTTTAGGTTCCTTAAGCG+AGG | - | chr2_1:65895737-65895756 | Msa0218620:CDS | 50.0% |
| GCAGCCTTAGCTACCCATAT+TGG | - | chr2_1:65895801-65895820 | Msa0218620:five_prime_UTR | 50.0% | |
| AGTAAGAAGGCTGCAAGGAC+TGG | - | chr2_1:65895897-65895916 | Msa0218620:intron | 50.0% | |
| !! | AGGAGTTCAGGAGGTGTTGA+AGG | - | chr2_1:65895930-65895949 | Msa0218620:intron | 50.0% |
| GTCATATAGGTGCCTCAGCT+TGG | - | chr2_1:65896040-65896059 | Msa0218620:five_prime_UTR | 50.0% | |
| !!! | GTGGCAGGGGCTGCATTTTT+TGG | + | chr2_1:65893674-65893693 | None:intergenic | 55.0% |
| CGGGGAGTTGAGAAGATCAG+TGG | + | chr2_1:65893734-65893753 | None:intergenic | 55.0% | |
| ACCTGGACGGTTGTTTGTGG+CGG | + | chr2_1:65893785-65893804 | None:intergenic | 55.0% | |
| CGGAGGAAGAATTCGACTGC+AGG | - | chr2_1:65894337-65894356 | Msa0218620:intron | 55.0% | |
| !!! | GCTGTCGCTGCTGTTTTTCC+CGG | - | chr2_1:65894832-65894851 | Msa0218620:CDS | 55.0% |
| ! | CAAGGACTGGTGTAGCTGGT+AGG | - | chr2_1:65895910-65895929 | Msa0218620:intron | 55.0% |
| GGTGTAGCTGGTAGGAGTTC+AGG | - | chr2_1:65895918-65895937 | Msa0218620:intron | 55.0% | |
| GTAGCTGGTAGGAGTTCAGG+AGG | - | chr2_1:65895921-65895940 | Msa0218620:intron | 55.0% | |
| CCACTTACTGCTCCAAGCTG+AGG | + | chr2_1:65896055-65896074 | None:intergenic | 55.0% | |
| CCTCAGCTTGGAGCAGTAAG+TGG | - | chr2_1:65896052-65896071 | Msa0218620:five_prime_UTR | 55.0% | |
| !!! | GTGGCAGGGGCTGCATTTTT+TGG | + | chr2_1:65893674-65893693 | None:intergenic | 55.0% |
| CGGGGAGTTGAGAAGATCAG+TGG | + | chr2_1:65893734-65893753 | None:intergenic | 55.0% | |
| ACCTGGACGGTTGTTTGTGG+CGG | + | chr2_1:65893785-65893804 | None:intergenic | 55.0% | |
| CGGAGGAAGAATTCGACTGC+AGG | - | chr2_1:65894337-65894356 | Msa0218620:intron | 55.0% | |
| !!! | GCTGTCGCTGCTGTTTTTCC+CGG | - | chr2_1:65894832-65894851 | Msa0218620:CDS | 55.0% |
| ! | CAAGGACTGGTGTAGCTGGT+AGG | - | chr2_1:65895910-65895929 | Msa0218620:intron | 55.0% |
| GGTGTAGCTGGTAGGAGTTC+AGG | - | chr2_1:65895918-65895937 | Msa0218620:intron | 55.0% | |
| GTAGCTGGTAGGAGTTCAGG+AGG | - | chr2_1:65895921-65895940 | Msa0218620:intron | 55.0% | |
| CCACTTACTGCTCCAAGCTG+AGG | + | chr2_1:65896055-65896074 | None:intergenic | 55.0% | |
| CCTCAGCTTGGAGCAGTAAG+TGG | - | chr2_1:65896052-65896071 | Msa0218620:five_prime_UTR | 55.0% | |
| !! | CCGATTTTCGGGGAAGGACG+CGG | + | chr2_1:65894160-65894179 | None:intergenic | 60.0% |
| CCGCGTCCTTCCCCGAAAAT+CGG | - | chr2_1:65894157-65894176 | Msa0218620:CDS | 60.0% | |
| ! | GCTGCAAGGACTGGTGTAGC+TGG | - | chr2_1:65895906-65895925 | Msa0218620:intron | 60.0% |
| !! | CCGATTTTCGGGGAAGGACG+CGG | + | chr2_1:65894160-65894179 | None:intergenic | 60.0% |
| CCGCGTCCTTCCCCGAAAAT+CGG | - | chr2_1:65894157-65894176 | Msa0218620:CDS | 60.0% | |
| ! | GCTGCAAGGACTGGTGTAGC+TGG | - | chr2_1:65895906-65895925 | Msa0218620:intron | 60.0% |
| GGCGGCCGGAGAACAAACTC+CGG | + | chr2_1:65893767-65893786 | None:intergenic | 65.0% | |
| GGACGGTTGTTTGTGGCGGC+CGG | + | chr2_1:65893781-65893800 | None:intergenic | 65.0% | |
| GCCGCCACAAACAACCGTCC+AGG | - | chr2_1:65893781-65893800 | Msa0218620:intron | 65.0% | |
| AATGGGGGAACGTGCTCCGC+AGG | - | chr2_1:65894774-65894793 | Msa0218620:CDS | 65.0% | |
| GGCGGCCGGAGAACAAACTC+CGG | + | chr2_1:65893767-65893786 | None:intergenic | 65.0% | |
| GGACGGTTGTTTGTGGCGGC+CGG | + | chr2_1:65893781-65893800 | None:intergenic | 65.0% | |
| GCCGCCACAAACAACCGTCC+AGG | - | chr2_1:65893781-65893800 | Msa0218620:intron | 65.0% | |
| AATGGGGGAACGTGCTCCGC+AGG | - | chr2_1:65894774-65894793 | Msa0218620:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 65893648 | 65896099 | 65893648 | ID=Msa0218620;Name=Msa0218620 |
| chr2_1 | mRNA | 65893648 | 65896099 | 65893648 | ID=Msa0218620-mRNA-1;Parent=Msa0218620;Name=Msa0218620-mRNA-1;_AED=0.16;_eAED=0.16;_QI=209|0.25|0.11|1|0.12|0.22|9|0|448 |
| chr2_1 | exon | 65893648 | 65893698 | 65893648 | ID=Msa0218620-mRNA-1:exon:18545;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65893782 | 65894002 | 65893782 | ID=Msa0218620-mRNA-1:exon:18544;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65894021 | 65894233 | 65894021 | ID=Msa0218620-mRNA-1:exon:18543;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65894384 | 65894586 | 65894384 | ID=Msa0218620-mRNA-1:exon:18542;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65894632 | 65894852 | 65894632 | ID=Msa0218620-mRNA-1:exon:18541;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65895303 | 65895500 | 65895303 | ID=Msa0218620-mRNA-1:exon:18540;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65895519 | 65895706 | 65895519 | ID=Msa0218620-mRNA-1:exon:18539;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65895724 | 65895826 | 65895724 | ID=Msa0218620-mRNA-1:exon:18538;Parent=Msa0218620-mRNA-1 |
| chr2_1 | exon | 65895945 | 65896099 | 65895945 | ID=Msa0218620-mRNA-1:exon:18537;Parent=Msa0218620-mRNA-1 |
| chr2_1 | five_prime_UTR | 65895945 | 65896099 | 65895945 | ID=Msa0218620-mRNA-1:five_prime_utr;Parent=Msa0218620-mRNA-1 |
| chr2_1 | five_prime_UTR | 65895773 | 65895826 | 65895773 | ID=Msa0218620-mRNA-1:five_prime_utr;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65895724 | 65895772 | 65895724 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65895519 | 65895706 | 65895519 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65895303 | 65895500 | 65895303 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65894632 | 65894852 | 65894632 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65894384 | 65894586 | 65894384 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65894021 | 65894233 | 65894021 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65893782 | 65894002 | 65893782 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| chr2_1 | CDS | 65893648 | 65893698 | 65893648 | ID=Msa0218620-mRNA-1:cds;Parent=Msa0218620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
