AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0218790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218790 MtrunA17_Chr2g0321101 98.491 464 7 0 1 464 1 464 0.0 946
Msa0218790 MtrunA17_Chr2g0290691 50.224 446 199 8 9 441 126 561 7.95e-142 419
Msa0218790 MtrunA17_Chr3g0080101 47.648 489 191 13 14 458 331 798 7.43e-136 410
Msa0218790 MtrunA17_Chr7g0227331 50.000 444 181 10 19 441 166 589 7.16e-135 402
Msa0218790 MtrunA17_Chr7g0250631 52.284 394 152 6 66 443 343 716 1.06e-134 406
Msa0218790 MtrunA17_Chr1g0179101 54.381 388 150 7 66 441 449 821 2.53e-134 408
Msa0218790 MtrunA17_Chr8g0335351 52.941 391 149 6 66 440 349 720 1.89e-133 403
Msa0218790 MtrunA17_Chr2g0309421 49.647 425 165 8 68 462 157 562 3.27e-133 396
Msa0218790 MtrunA17_Chr7g0266031 54.639 388 149 7 66 441 471 843 5.36e-133 405
Msa0218790 MtrunA17_Chr8g0356291 51.969 381 173 5 68 444 107 481 1.57e-131 390
Msa0218790 MtrunA17_Chr6g0449401 45.473 486 190 9 32 464 210 673 4.84e-129 389
Msa0218790 MtrunA17_Chr4g0063311 48.403 407 164 8 71 448 75 464 3.50e-126 375
Msa0218790 MtrunA17_Chr2g0285711 47.194 392 175 6 90 464 78 454 1.83e-118 354
Msa0218790 MtrunA17_Chr2g0312641 46.547 391 173 7 66 451 71 430 8.77e-112 338
Msa0218790 MtrunA17_Chr8g0381091 46.098 410 187 9 52 448 42 430 1.10e-111 337
Msa0218790 MtrunA17_Chr4g0030361 46.809 376 149 7 68 443 288 612 1.74e-102 319
Msa0218790 MtrunA17_Chr2g0327561 46.381 373 160 5 71 443 610 942 9.54e-97 312
Msa0218790 MtrunA17_Chr8g0369091 42.222 405 173 9 68 462 578 931 7.84e-94 303
Msa0218790 MtrunA17_Chr8g0338741 42.135 356 177 10 97 442 26 362 3.51e-82 260
Msa0218790 MtrunA17_Chr4g0032761 37.056 394 218 8 90 464 14 396 4.85e-79 252
Msa0218790 MtrunA17_Chr2g0329011 37.912 364 187 9 81 441 6 333 1.76e-75 241
Msa0218790 MtrunA17_Chr7g0234641 35.849 371 211 9 90 452 12 363 3.32e-66 218
Msa0218790 MtrunA17_Chr6g0478601 32.804 378 193 9 70 441 95 417 1.08e-52 185
Msa0218790 MtrunA17_Chr5g0428981 32.143 364 200 8 85 447 757 1074 2.78e-52 190
Msa0218790 MtrunA17_Chr4g0018201 31.868 364 201 8 85 447 753 1070 7.56e-52 188
Msa0218790 MtrunA17_Chr1g0153321 30.278 360 214 8 84 441 101 425 2.10e-46 168
Msa0218790 MtrunA17_Chr1g0183651 31.231 333 179 8 118 441 144 435 6.84e-44 162
Msa0218790 MtrunA17_Chr1g0187581 29.235 366 207 8 85 441 111 433 7.75e-43 159
Msa0218790 MtrunA17_Chr3g0135951 30.460 348 210 8 97 441 100 418 4.18e-42 156
Msa0218790 MtrunA17_Chr1g0197721 30.641 359 181 7 81 438 41 332 6.78e-41 152
Msa0218790 MtrunA17_Chr1g0167311 29.107 347 208 9 97 441 121 431 5.30e-40 150
Msa0218790 MtrunA17_Chr1g0167351 30.086 349 203 9 97 441 116 427 5.45e-40 150
Msa0218790 MtrunA17_Chr2g0299781 29.830 352 207 9 97 441 119 437 1.03e-38 147
Msa0218790 MtrunA17_Chr7g0261491 29.305 331 190 9 119 441 145 439 1.60e-38 147
Msa0218790 MtrunA17_Chr7g0245031 36.970 165 99 2 84 248 141 300 3.19e-27 114
Msa0218790 MtrunA17_Chr7g0245031 38.400 125 72 3 320 441 301 423 2.55e-18 87.4
Msa0218790 MtrunA17_Chr4g0059751 34.911 169 100 3 85 247 83 247 1.39e-25 108
Msa0218790 MtrunA17_Chr4g0059751 35.664 143 87 3 320 459 249 389 1.43e-20 93.6
Msa0218790 MtrunA17_Chr8g0353621 27.103 321 156 7 89 409 8 250 7.80e-23 97.8
Msa0218790 MtrunA17_Chr3g0125381 42.975 121 67 1 309 427 95 215 3.38e-21 91.7
Msa0218790 MtrunA17_Chr8g0351491 28.116 345 160 11 89 427 14 276 1.52e-20 91.3
Msa0218790 MtrunA17_Chr6g0486661 42.520 127 67 5 318 442 910 1032 3.04e-19 91.3
Msa0218790 MtrunA17_Chr3g0140631 31.016 187 117 3 56 242 9 183 1.70e-18 85.9
Msa0218790 MtrunA17_Chr3g0140631 44.444 90 50 0 320 409 188 277 6.15e-18 84.3
Msa0218790 MtrunA17_Chr2g0304111 22.193 374 200 10 81 453 13 296 9.72e-18 85.5
Msa0218790 MtrunA17_Chr5g0428031 22.956 318 167 8 93 409 11 251 1.23e-17 85.1
Msa0218790 MtrunA17_Chr1g0188031 33.553 152 94 4 92 241 21 167 2.95e-17 84.0
Msa0218790 MtrunA17_Chr2g0286501 31.818 198 115 6 97 286 55 240 3.05e-17 85.1
Msa0218790 MtrunA17_Chr1g0205421 25.316 237 162 6 93 322 14 242 6.47e-17 82.8
Msa0218790 MtrunA17_Chr2g0302431 22.222 351 188 9 81 425 5 276 3.11e-16 80.9
Msa0218790 MtrunA17_Chr7g0272841 33.117 154 95 3 92 241 69 218 5.28e-16 80.5
Msa0218790 MtrunA17_Chr6g0468751 22.520 373 202 9 90 462 18 303 6.06e-16 80.1
Msa0218790 MtrunA17_Chr6g0453681 22.520 373 202 9 90 462 18 303 7.58e-16 79.7
Msa0218790 MtrunA17_Chr5g0441011 22.713 317 169 8 94 409 16 257 7.74e-16 79.3
Msa0218790 MtrunA17_Chr1g0166101 31.646 158 102 3 85 241 18 170 1.02e-15 79.0
Msa0218790 MtrunA17_Chr3g0114511 28.125 160 107 2 82 241 23 174 1.06e-15 79.0
Msa0218790 MtrunA17_Chr8g0346071 21.447 387 216 13 79 461 7 309 1.39e-15 78.6
Msa0218790 MtrunA17_Chr1g0205931 29.612 206 139 3 48 249 10 213 1.77e-15 79.0
Msa0218790 MtrunA17_Chr5g0432491 32.000 150 95 3 93 241 25 168 3.03e-15 77.8
Msa0218790 MtrunA17_Chr1g0202831 28.866 194 127 4 54 241 370 558 5.62e-15 77.8
Msa0218790 MtrunA17_Chr8g0346081 20.973 329 182 8 82 409 8 259 8.29e-15 76.3
Msa0218790 MtrunA17_Chr4g0074111 29.054 148 99 2 93 240 20 161 9.45e-15 75.9
Msa0218790 MtrunA17_Chr3g0130151 28.902 173 112 4 97 267 250 413 1.29e-14 76.3
Msa0218790 MtrunA17_Chr2g0284031 28.947 152 102 2 94 245 34 179 2.19e-14 75.5
Msa0218790 MtrunA17_Chr4g0063881 23.028 317 166 7 94 409 14 253 2.19e-14 75.1
Msa0218790 MtrunA17_Chr3g0107051 30.201 149 98 2 93 241 23 165 2.41e-14 74.7
Msa0218790 MtrunA17_Chr8g0386981 29.381 194 124 4 48 241 375 555 3.15e-14 75.5
Msa0218790 MtrunA17_Chr1g0150321 24.159 327 161 12 94 413 16 262 6.71e-14 73.6
Msa0218790 MtrunA17_Chr3g0132671 23.247 271 134 6 139 409 94 290 6.95e-14 73.6
Msa0218790 MtrunA17_Chr2g0321841 26.623 154 106 3 96 246 9 158 2.59e-13 72.4
Msa0218790 MtrunA17_Chr4g0013131 26.846 149 103 2 93 241 14 156 2.61e-13 71.6
Msa0218790 MtrunA17_Chr8g0379091 26.923 156 108 2 91 246 26 175 3.71e-13 71.6
Msa0218790 MtrunA17_Chr8g0345801 29.143 175 111 5 96 267 20 184 3.71e-13 69.7
Msa0218790 MtrunA17_Chr8g0384301 29.032 155 103 3 89 241 297 446 5.32e-13 71.2
Msa0218790 MtrunA17_Chr4g0025671 27.273 154 105 3 96 246 13 162 7.68e-13 70.9
Msa0218790 MtrunA17_Chr1g0190831 27.922 154 104 3 96 246 9 158 2.18e-12 69.3
Msa0218790 MtrunA17_Chr5g0419441 28.188 149 97 4 97 243 245 385 2.35e-12 69.3
Msa0218790 MtrunA17_Chr4g0047191 24.725 182 135 1 66 247 19 198 2.39e-12 68.2
Msa0218790 MtrunA17_Chr1g0203881 31.818 154 94 5 93 241 43 190 2.68e-12 68.9
Msa0218790 MtrunA17_Chr2g0284011 28.378 148 100 2 94 241 15 156 2.84e-12 68.6
Msa0218790 MtrunA17_Chr3g0091311 29.139 151 97 3 93 241 14 156 3.40e-12 66.6
Msa0218790 MtrunA17_Chr1g0200601 26.882 186 124 5 61 242 3 180 5.24e-12 67.8
Msa0218790 MtrunA17_Chr5g0402601 29.381 194 126 5 50 241 336 520 5.42e-12 68.2
Msa0218790 MtrunA17_Chr3g0107011 26.174 149 104 2 93 241 16 158 5.95e-12 67.4
Msa0218790 MtrunA17_Chr4g0047211 25.146 171 126 1 77 247 25 193 7.30e-12 66.6
Msa0218790 MtrunA17_Chr1g0185221 25.974 154 107 3 96 246 9 158 7.45e-12 67.4
Msa0218790 MtrunA17_Chr7g0244521 26.012 173 122 2 93 265 14 180 7.71e-12 67.0
Msa0218790 MtrunA17_Chr4g0001331 25.786 159 110 3 84 241 13 164 9.66e-12 67.0
Msa0218790 MtrunA17_Chr3g0132591 30.387 181 107 6 97 275 118 281 1.02e-11 67.0
Msa0218790 MtrunA17_Chr5g0432471 24.503 151 104 4 93 241 14 156 2.96e-11 65.5
Msa0218790 MtrunA17_Chr4g0074811 28.713 202 122 9 56 242 47 241 5.14e-11 64.7
Msa0218790 MtrunA17_Chr5g0448721 26.554 177 121 5 93 267 98 267 5.47e-11 64.7
Msa0218790 MtrunA17_Chr5g0424581 29.651 172 108 5 76 241 106 270 6.37e-11 63.9
Msa0218790 MtrunA17_Chr4g0047201 26.829 123 87 1 126 245 235 357 9.61e-11 63.9
Msa0218790 MtrunA17_Chr4g0059951 26.728 217 143 7 31 242 18 223 9.80e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218790 AT3G44610.1 63.655 476 136 7 1 464 1 451 0.0 580
Msa0218790 AT5G47750.1 48.262 489 208 9 5 459 85 562 2.43e-144 425
Msa0218790 AT3G27580.2 54.293 396 155 8 61 443 153 535 5.15e-142 419
Msa0218790 AT3G27580.1 54.293 396 155 8 61 443 153 535 5.15e-142 419
Msa0218790 AT3G12690.1 54.974 382 153 6 66 443 162 528 2.38e-139 412
Msa0218790 AT3G12690.3 54.974 382 153 6 66 443 162 528 2.38e-139 412
Msa0218790 AT3G12690.2 54.974 382 153 6 66 443 162 528 2.38e-139 412
Msa0218790 AT1G79250.1 53.634 399 166 7 66 452 123 514 8.93e-139 410
Msa0218790 AT1G79250.3 53.634 399 166 7 66 452 123 514 8.93e-139 410
Msa0218790 AT1G79250.2 53.634 399 166 7 66 452 123 514 8.93e-139 410
Msa0218790 AT1G79250.4 53.634 399 166 7 66 452 123 514 8.93e-139 410
Msa0218790 AT4G26610.1 50.117 427 167 9 33 443 79 475 4.00e-138 407
Msa0218790 AT5G55910.2 54.337 392 153 8 66 443 86 465 1.34e-137 405
Msa0218790 AT5G55910.1 54.337 392 153 8 66 443 86 465 1.34e-137 405
Msa0218790 AT1G16440.1 53.671 395 159 8 66 451 90 469 3.58e-134 396
Msa0218790 AT2G44830.2 50.348 431 189 8 16 441 304 714 8.24e-133 401
Msa0218790 AT2G44830.3 50.348 431 189 8 16 441 304 714 8.24e-133 401
Msa0218790 AT2G44830.1 50.348 431 189 8 16 441 304 714 8.24e-133 401
Msa0218790 AT5G40030.1 53.158 380 169 5 66 443 90 462 8.41e-133 393
Msa0218790 AT2G36350.1 52.273 396 159 8 66 444 536 918 5.81e-132 404
Msa0218790 AT5G03640.2 51.750 400 155 6 66 444 516 898 7.58e-132 404
Msa0218790 AT5G03640.1 51.750 400 155 6 66 444 516 898 7.58e-132 404
Msa0218790 AT3G52890.2 48.222 450 189 7 14 444 475 899 3.11e-131 402
Msa0218790 AT3G52890.4 48.222 450 189 7 14 444 475 899 3.11e-131 402
Msa0218790 AT3G52890.1 48.222 450 189 7 14 444 475 899 3.11e-131 402
Msa0218790 AT3G52890.3 48.222 450 189 7 14 444 475 899 3.11e-131 402
Msa0218790 AT2G26700.1 42.886 492 198 13 33 464 32 500 3.15e-121 364
Msa0218790 AT2G34650.1 47.045 423 185 9 38 446 19 416 1.24e-117 352
Msa0218790 AT1G53700.1 44.110 399 195 5 63 460 65 436 1.62e-104 320
Msa0218790 AT3G14370.1 46.649 373 170 6 68 438 65 410 1.16e-101 312
Msa0218790 AT5G58140.6 43.947 380 165 7 71 450 559 890 1.67e-99 318
Msa0218790 AT5G58140.7 43.947 380 165 7 71 450 559 890 1.67e-99 318
Msa0218790 AT5G58140.5 43.947 380 165 7 71 450 559 890 1.67e-99 318
Msa0218790 AT5G58140.2 43.947 380 165 7 71 450 559 890 1.67e-99 318
Msa0218790 AT5G58140.1 43.947 380 165 7 71 450 559 890 1.67e-99 318
Msa0218790 AT5G58140.3 44.904 363 152 7 71 433 559 873 9.81e-98 313
Msa0218790 AT3G45780.2 44.415 376 161 7 69 443 643 971 2.48e-93 303
Msa0218790 AT3G45780.1 44.415 376 161 7 69 443 643 971 2.48e-93 303
Msa0218790 AT1G51170.1 36.693 387 196 10 82 452 13 366 1.50e-74 240
Msa0218790 AT3G20830.1 37.709 358 185 9 97 441 27 359 1.20e-68 224
Msa0218790 AT4G13000.1 36.134 357 178 11 97 443 26 342 4.77e-68 222
Msa0218790 AT3G25250.1 35.200 375 201 10 80 443 6 349 7.89e-66 218
Msa0218790 AT3G17850.1 33.241 361 195 7 82 441 873 1188 2.90e-51 187
Msa0218790 AT1G45160.1 34.444 360 186 8 85 443 664 974 9.97e-51 186
Msa0218790 AT1G45160.2 34.444 360 186 8 85 443 664 974 1.27e-50 185
Msa0218790 AT1G48490.3 31.868 364 184 8 85 441 822 1128 1.65e-49 182
Msa0218790 AT1G48490.2 31.868 364 184 8 85 441 822 1128 1.65e-49 182
Msa0218790 AT1G48490.1 31.868 364 184 8 85 441 822 1128 1.65e-49 182
Msa0218790 AT1G48490.4 31.868 364 184 8 85 441 823 1129 1.79e-49 182
Msa0218790 AT5G04510.2 30.220 364 186 7 80 442 33 329 2.26e-49 174
Msa0218790 AT5G04510.1 30.495 364 185 7 80 442 33 329 5.58e-49 175
Msa0218790 AT5G62310.1 31.593 364 203 6 85 447 748 1066 1.32e-48 179
Msa0218790 AT3G10540.1 29.945 364 187 7 80 442 34 330 2.80e-48 173
Msa0218790 AT1G30640.3 31.232 349 202 9 97 441 33 347 1.83e-47 170
Msa0218790 AT1G30640.2 30.946 349 203 9 97 441 126 440 7.79e-47 170
Msa0218790 AT1G30640.1 30.946 349 203 9 97 441 126 440 7.79e-47 170
Msa0218790 AT5G09890.1 29.167 360 220 8 84 441 95 421 1.35e-42 158
Msa0218790 AT5G09890.2 29.167 360 220 8 84 441 95 421 1.63e-42 157
Msa0218790 AT4G33080.2 30.194 361 219 9 85 441 88 419 3.71e-42 156
Msa0218790 AT4G33080.1 30.055 366 213 11 85 441 88 419 4.48e-42 156
Msa0218790 AT4G14350.3 28.940 349 206 8 97 441 125 435 1.58e-40 153
Msa0218790 AT2G20470.2 29.086 361 212 10 85 441 118 438 1.66e-40 153
Msa0218790 AT2G20470.1 29.086 361 212 10 85 441 118 438 1.66e-40 153
Msa0218790 AT4G14350.2 28.940 349 206 8 97 441 125 435 1.66e-40 152
Msa0218790 AT4G14350.1 28.940 349 206 8 97 441 125 435 1.66e-40 152
Msa0218790 AT4G14350.4 28.940 349 206 8 97 441 125 435 1.66e-40 152
Msa0218790 AT2G20470.3 29.086 361 212 10 85 441 118 438 1.68e-40 152
Msa0218790 AT3G23310.1 27.704 379 218 10 97 460 126 463 1.94e-40 153
Msa0218790 AT1G03920.2 27.577 359 221 7 85 441 18 339 1.19e-39 149
Msa0218790 AT1G03920.1 28.134 359 219 8 85 441 131 452 2.37e-39 150
Msa0218790 AT1G03920.3 28.134 359 219 8 85 441 131 452 2.37e-39 150
Msa0218790 AT5G04510.3 28.704 324 164 6 80 403 33 289 8.65e-39 143
Msa0218790 AT2G19400.1 29.558 362 221 9 85 441 99 431 5.95e-38 145
Msa0218790 AT3G08720.1 35.503 169 104 2 80 248 129 292 2.26e-25 108
Msa0218790 AT3G08720.1 41.732 127 68 4 318 441 291 414 2.49e-21 96.7
Msa0218790 AT3G08720.3 35.503 169 104 2 80 248 129 292 2.26e-25 108
Msa0218790 AT3G08720.3 41.732 127 68 4 318 441 291 414 2.49e-21 96.7
Msa0218790 AT3G08720.4 35.503 169 104 2 80 248 129 292 2.26e-25 108
Msa0218790 AT3G08720.4 41.732 127 68 4 318 441 291 414 2.49e-21 96.7
Msa0218790 AT3G08720.2 35.503 169 104 2 80 248 129 292 2.26e-25 108
Msa0218790 AT3G08720.2 41.732 127 68 4 318 441 291 414 2.49e-21 96.7
Msa0218790 AT5G58140.4 43.750 128 67 2 71 198 559 681 1.03e-24 107
Msa0218790 AT3G08730.1 35.220 159 98 2 90 248 133 286 1.91e-24 105
Msa0218790 AT3G08730.1 41.732 127 68 4 318 441 285 408 2.87e-22 99.8
Msa0218790 AT3G08730.2 35.220 159 98 2 90 248 133 286 1.91e-24 105
Msa0218790 AT3G08730.2 41.732 127 68 4 318 441 285 408 2.87e-22 99.8
Msa0218790 AT5G18700.1 33.673 196 110 6 97 286 10 191 3.87e-22 100
Msa0218790 AT1G30270.2 24.405 336 173 10 93 426 33 289 3.13e-20 93.6
Msa0218790 AT1G30270.1 24.405 336 173 10 93 426 33 289 3.61e-20 93.6
Msa0218790 AT2G20050.1 41.964 112 61 3 320 429 934 1043 1.64e-19 92.4
Msa0218790 AT2G20050.2 41.964 112 61 3 320 429 931 1040 1.83e-19 92.4
Msa0218790 AT4G24400.2 24.214 318 163 8 93 409 11 251 2.37e-19 90.5
Msa0218790 AT5G10930.1 24.390 328 170 10 84 409 5 256 5.10e-19 89.7
Msa0218790 AT4G32830.1 45.556 90 49 0 320 409 182 271 8.35e-19 87.0
Msa0218790 AT4G32830.1 31.169 154 101 2 89 242 29 177 3.09e-15 76.6
Msa0218790 AT1G01140.3 23.467 375 196 11 81 454 9 293 1.16e-18 88.6
Msa0218790 AT4G24400.1 24.214 318 163 8 93 409 11 251 1.24e-18 88.6
Msa0218790 AT1G01140.1 23.467 375 196 11 81 454 9 293 1.26e-18 88.6
Msa0218790 AT2G45490.1 47.778 90 47 0 320 409 173 262 2.97e-18 85.5
Msa0218790 AT2G45490.1 30.769 156 101 3 89 243 20 169 2.69e-15 76.6
Msa0218790 AT5G35410.2 24.465 327 167 8 84 409 6 253 3.15e-18 86.7
Msa0218790 AT2G25880.2 45.055 91 50 0 320 410 144 234 3.65e-18 84.3
Msa0218790 AT4G14580.1 24.615 325 168 9 93 414 23 273 5.47e-18 86.3
Msa0218790 AT2G25880.1 45.055 91 50 0 320 410 176 266 6.11e-18 84.3
Msa0218790 AT2G25880.1 31.707 164 107 2 79 242 13 171 6.98e-17 81.3
Msa0218790 AT2G25880.4 45.055 91 50 0 320 410 189 279 6.18e-18 84.7
Msa0218790 AT2G25880.4 31.707 164 107 2 79 242 26 184 7.84e-17 81.3
Msa0218790 AT5G35410.1 24.465 327 167 8 84 409 6 253 8.73e-18 85.9
Msa0218790 AT1G01140.2 22.955 379 195 11 81 454 9 295 1.01e-17 85.9
Msa0218790 AT5G25110.1 22.515 342 190 7 68 409 20 286 1.60e-17 85.5
Msa0218790 AT2G25880.3 45.055 91 50 0 320 410 237 327 1.75e-17 84.0
Msa0218790 AT2G25880.3 31.707 164 107 2 79 242 74 232 1.11e-16 81.6
Msa0218790 AT3G01090.3 22.933 375 198 10 90 462 18 303 3.46e-17 84.3
Msa0218790 AT3G01090.1 22.933 375 198 10 90 462 18 303 3.46e-17 84.3
Msa0218790 AT3G01090.2 22.933 375 198 10 90 462 41 326 4.28e-17 84.3
Msa0218790 AT1G09000.2 30.928 194 104 4 52 241 52 219 4.74e-17 84.3
Msa0218790 AT1G09000.1 30.928 194 104 4 52 241 52 219 6.14e-17 84.0
Msa0218790 AT1G12680.1 32.051 156 91 5 90 243 106 248 7.92e-17 83.2
Msa0218790 AT5G57630.2 30.201 149 98 2 93 241 14 156 9.16e-17 82.4
Msa0218790 AT5G57630.1 30.201 149 98 2 93 241 14 156 9.89e-17 82.4
Msa0218790 AT3G29160.3 22.024 336 181 8 90 425 19 273 2.85e-16 80.5
Msa0218790 AT5G45810.1 28.324 173 118 2 73 245 10 176 2.92e-16 81.3
Msa0218790 AT3G29160.1 22.024 336 181 8 90 425 19 273 3.30e-16 81.3
Msa0218790 AT3G29160.2 22.024 336 181 8 90 425 19 273 3.30e-16 81.3
Msa0218790 AT3G06030.1 30.939 181 102 4 78 249 60 226 4.78e-16 81.3
Msa0218790 AT2G26980.2 22.054 331 176 9 78 405 3 254 6.71e-16 78.2
Msa0218790 AT2G26980.1 22.090 335 179 9 78 409 3 258 6.90e-16 79.7
Msa0218790 AT1G54960.1 27.876 226 138 5 28 241 6 218 8.28e-16 80.5
Msa0218790 AT1G54960.2 27.876 226 138 5 28 241 6 218 8.28e-16 80.5
Msa0218790 AT2G26980.5 22.090 335 179 9 78 409 3 258 9.48e-16 79.7
Msa0218790 AT2G26980.3 22.090 335 179 9 78 409 3 258 9.50e-16 79.7
Msa0218790 AT2G26980.4 22.090 335 179 9 78 409 13 268 1.15e-15 79.3
Msa0218790 AT1G53570.6 30.412 194 119 5 97 283 220 404 1.29e-15 79.7
Msa0218790 AT1G53570.7 30.412 194 119 5 97 283 220 404 1.29e-15 79.7
Msa0218790 AT1G53570.4 30.412 194 119 5 97 283 220 404 1.52e-15 79.7
Msa0218790 AT1G53570.2 30.412 194 119 5 97 283 220 404 1.56e-15 79.7
Msa0218790 AT1G53570.3 30.412 194 119 5 97 283 220 404 1.56e-15 79.7
Msa0218790 AT1G53570.1 30.412 194 119 5 97 283 220 404 1.58e-15 79.7
Msa0218790 AT5G39440.1 22.552 337 179 6 90 426 18 272 2.17e-15 79.0
Msa0218790 AT2G45490.2 30.189 159 104 3 89 246 20 172 2.35e-15 76.3
Msa0218790 AT2G45490.2 43.902 82 46 0 320 401 173 254 3.11e-13 70.1
Msa0218790 AT2G34180.1 29.012 162 109 2 81 242 47 202 3.55e-15 78.2
Msa0218790 AT4G18700.1 29.586 169 108 3 82 245 12 174 5.55e-15 77.4
Msa0218790 AT1G29230.1 28.571 161 109 2 81 241 64 218 6.46e-15 77.4
Msa0218790 AT5G21326.1 23.404 329 172 10 83 409 7 257 1.09e-14 76.3
Msa0218790 AT1G48260.1 23.077 338 172 11 93 425 13 267 1.43e-14 75.9
Msa0218790 AT2G30360.1 23.197 319 168 8 93 409 23 266 4.50e-14 74.3
Msa0218790 AT3G17510.1 22.121 330 172 10 93 417 22 271 6.77e-14 73.9
Msa0218790 AT2G38490.1 33.333 153 88 5 93 241 30 172 1.25e-13 73.2
Msa0218790 AT3G23000.1 30.921 152 95 4 93 241 27 171 1.31e-13 72.8
Msa0218790 AT1G63700.1 27.419 186 122 3 89 264 398 580 1.76e-13 73.6
Msa0218790 AT1G63700.2 27.419 186 122 3 89 264 398 580 1.76e-13 73.6
Msa0218790 AT5G45820.1 28.188 149 101 2 93 241 14 156 4.23e-13 71.6
Msa0218790 AT2G38910.1 24.731 279 188 9 53 316 86 357 4.37e-13 72.0
Msa0218790 AT5G38210.1 33.766 154 88 4 93 241 360 504 6.75e-13 71.2
Msa0218790 AT1G54510.4 26.752 157 108 3 93 246 6 158 7.13e-13 71.2
Msa0218790 AT1G54510.2 26.752 157 108 3 93 246 6 158 7.13e-13 71.2
Msa0218790 AT1G54510.1 26.752 157 108 3 93 246 6 158 7.13e-13 71.2
Msa0218790 AT1G54510.3 26.752 157 108 3 93 246 6 158 7.13e-13 71.2
Msa0218790 AT3G44200.2 26.623 154 106 3 96 246 13 162 7.34e-13 71.6
Msa0218790 AT3G44200.1 26.623 154 106 3 96 246 13 162 7.34e-13 71.6
Msa0218790 AT1G66880.3 35.065 154 86 5 93 241 348 492 8.11e-13 71.2
Msa0218790 AT1G66880.1 33.766 154 88 4 93 241 969 1113 9.78e-13 71.2
Msa0218790 AT1G66880.2 35.065 154 86 5 93 241 590 734 1.05e-12 70.9
Msa0218790 AT5G38210.3 35.065 154 86 5 93 241 354 498 1.24e-12 70.5
Msa0218790 AT5G38210.2 35.065 154 86 5 93 241 372 516 1.26e-12 70.5
Msa0218790 AT3G61960.2 30.714 140 91 3 90 229 9 142 1.84e-12 69.7
Msa0218790 AT3G61960.1 30.714 140 91 3 90 229 9 142 1.92e-12 69.7
Msa0218790 AT1G35670.1 23.077 338 174 11 80 411 18 275 3.27e-12 68.9
Msa0218790 AT5G28290.1 26.623 154 106 3 96 246 9 158 3.75e-12 68.9
Msa0218790 AT5G28290.2 26.623 154 106 3 96 246 9 158 3.75e-12 68.9
Msa0218790 AT5G28290.3 26.623 154 106 3 96 246 9 158 3.90e-12 68.9
Msa0218790 AT1G50700.3 28.824 170 108 5 93 256 75 237 4.02e-12 68.6
Msa0218790 AT3G20410.2 27.647 170 110 5 93 256 93 255 4.68e-12 68.6
Msa0218790 AT3G20410.1 27.647 170 110 5 93 256 93 255 4.68e-12 68.6
Msa0218790 AT5G58950.1 25.000 164 120 1 85 245 201 364 5.73e-12 68.2
Msa0218790 AT1G50700.1 28.824 170 108 5 93 256 75 237 5.74e-12 68.2
Msa0218790 AT3G04810.2 25.974 154 107 3 96 246 9 158 5.74e-12 68.2
Msa0218790 AT3G04810.1 25.974 154 107 3 96 246 9 158 5.74e-12 68.2
Msa0218790 AT3G04810.3 25.974 154 107 3 96 246 9 158 5.74e-12 68.2
Msa0218790 AT1G50700.2 28.824 170 108 5 93 256 75 237 6.61e-12 68.2
Msa0218790 AT2G25090.1 30.667 150 96 4 94 241 18 161 7.07e-12 67.8
Msa0218790 AT4G09570.1 23.143 350 183 11 68 411 5 274 8.15e-12 67.8
Msa0218790 AT5G01810.3 26.316 171 119 3 97 267 18 181 1.04e-11 66.6
Msa0218790 AT5G01820.1 30.201 149 98 2 97 245 28 170 1.46e-11 66.6
Msa0218790 AT5G01810.1 26.316 171 119 3 97 267 18 181 1.65e-11 66.2
Msa0218790 AT5G01810.2 26.316 171 119 3 97 267 18 181 1.65e-11 66.2
Msa0218790 AT4G10010.2 32.020 203 114 8 52 241 111 302 2.97e-11 66.2
Msa0218790 AT4G30960.1 27.517 149 102 2 93 241 26 168 3.24e-11 65.5
Msa0218790 AT5G21222.1 27.500 120 85 1 121 240 40 157 3.39e-11 66.2
Msa0218790 AT5G21222.2 27.500 120 85 1 121 240 40 157 3.39e-11 66.2
Msa0218790 AT5G21222.4 27.500 120 85 1 121 240 40 157 3.39e-11 66.2
Msa0218790 AT5G21222.3 27.500 120 85 1 121 240 40 157 3.39e-11 66.2

Find 194 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGGCACGGTGGGTTCTTT+TGG 0.155792 2_1:+66240738 None:intergenic
AGATCTTATCTCACAGTTAT+TGG 0.184485 2_1:-66240706 Msa0218790:CDS
TCTTCTTTGTCTTTAGTATA+AGG 0.250431 2_1:+66240561 None:intergenic
TTGATGACAAATTAAATTAA+TGG 0.251658 2_1:-66240100 Msa0218790:three_prime_UTR
CCCTCACCAGACACTATTTC+AGG 0.255306 2_1:+66240891 None:intergenic
TTAGCTAGCTAGTTGAATTC+AGG 0.265600 2_1:-66240262 Msa0218790:three_prime_UTR
ATTGATCCTAGCCTTCTTGC+TGG 0.297843 2_1:+66240675 None:intergenic
GAGATGGAGGAAATAACTTT+TGG 0.297990 2_1:+66247348 None:intergenic
TTTGATTGGAGATTATTATC+TGG 0.300661 2_1:+66241135 None:intergenic
TTCCACGTATTTACACAATA+AGG 0.305620 2_1:+66240334 None:intergenic
AGTGTTACAGTTGTTGAAAA+TGG 0.307735 2_1:+66247308 None:intergenic
TGATGACAAATTAAATTAAT+GGG 0.329498 2_1:-66240099 Msa0218790:three_prime_UTR
CAAGCTCAATCAACATAGTT+TGG 0.334165 2_1:+66240120 None:intergenic
GTGGTGGTTGGAGGAGGAGG+AGG 0.336101 2_1:+66246986 None:intergenic
TCATTATCCAAGCCTCTAAA+AGG 0.349968 2_1:+66240801 None:intergenic
CAAAATACTGAACTTGAATC+TGG 0.355528 2_1:-66240392 Msa0218790:three_prime_UTR
TATCTCACAGTTATTGGTTA+AGG 0.355551 2_1:-66240700 Msa0218790:CDS
TTGCTGAGCCCATTGATGTT+AGG 0.359674 2_1:-66240950 Msa0218790:CDS
GCTGTGGATTGGTGGACCTT+AGG 0.360224 2_1:-66240858 Msa0218790:CDS
TTGGTGGTGGTTGGAGGAGG+AGG 0.362759 2_1:+66246983 None:intergenic
CAAAGTCTGTGAGCATTATA+TGG 0.368029 2_1:+66241195 None:intergenic
AAATGGGTCTTTCTCAAAAC+GGG 0.368200 2_1:+66247325 None:intergenic
CTATTGTCTTTATATTTAAG+AGG 0.370138 2_1:-66240171 Msa0218790:three_prime_UTR
AAGAAGGCTAGGATCAATAA+TGG 0.382085 2_1:-66240670 Msa0218790:CDS
GATATAAGTGGGGTTGGGAA+TGG 0.383003 2_1:+66247248 None:intergenic
TGTTTGGTGGTGGTTGGAGG+AGG 0.396205 2_1:+66246980 None:intergenic
AGAAGGCTAGGATCAATAAT+GGG 0.404261 2_1:-66240669 Msa0218790:CDS
GTGTCAATTGGGCATTGTTA+AGG 0.405165 2_1:-66240611 Msa0218790:CDS
TTAGGTCCATGTCATTTGTT+GGG 0.405437 2_1:-66240932 Msa0218790:CDS
AAATATCGTGGCTCGAGCTT+TGG 0.409780 2_1:-66240766 Msa0218790:CDS
GAGGAGGAGGAGGGAAGGGA+AGG 0.411817 2_1:+66246996 None:intergenic
AGAAGCGGAGGTCGGAGGGG+TGG 0.412750 2_1:+66246885 None:intergenic
TAAATATAAAGACAATAGTA+TGG 0.417788 2_1:+66240176 None:intergenic
CAACGATGATGGAAAGATTC+CGG 0.419156 2_1:-66246813 Msa0218790:CDS
CTATGCATCAGAAGTGTTGA+TGG 0.422952 2_1:-66241294 Msa0218790:CDS
CTTGAATACCTTCACATGTT+GGG 0.423434 2_1:-66241269 Msa0218790:CDS
TTGATTGGAGATTATTATCT+GGG 0.425797 2_1:+66241136 None:intergenic
GCGGGAGAAGCGGAGGTCGG+AGG 0.427393 2_1:+66246880 None:intergenic
ATATAAGTGGGGTTGGGAAT+GGG 0.427457 2_1:+66247249 None:intergenic
GTTGGAGGAGGAGGAGGGAA+GGG 0.427718 2_1:+66246992 None:intergenic
TGATTATTATTGATCACAAT+AGG 0.429551 2_1:-66240505 Msa0218790:exon
GGTTGGAGGAGGAGGAGGGA+AGG 0.431258 2_1:+66246991 None:intergenic
TTCCTCCTTCTATTGCGATC+CGG 0.432704 2_1:+66240294 None:intergenic
AAGGAGAGAGTGAGAGTAAA+CGG 0.434582 2_1:+66247278 None:intergenic
AAAATGGGTCTTTCTCAAAA+CGG 0.435161 2_1:+66247324 None:intergenic
TTGATCACAATAGGAGAGCT+TGG 0.440867 2_1:-66240496 Msa0218790:exon
CAAACTCAGGCCCATTGAAC+TGG 0.441625 2_1:+66240973 None:intergenic
GATGCGACGAGAAGGGGATT+CGG 0.442774 2_1:+66246907 None:intergenic
GTTAGGTCCATGTCATTTGT+TGG 0.444549 2_1:-66240933 Msa0218790:CDS
CTCCGCTTCTCCCGCCGTCT+CGG 0.445241 2_1:-66246872 Msa0218790:CDS
GATCGAACTAATACATTCTC+AGG 0.446844 2_1:+66241224 None:intergenic
TGTGATCAATAATAATCAAC+AGG 0.446969 2_1:+66240510 None:intergenic
ATGGTGACAAATTAACTTAA+CGG 0.452222 2_1:+66240195 None:intergenic
GGAGCTTGTTAGTAGAAGTA+AGG 0.452403 2_1:-66246759 Msa0218790:CDS
GGGAGCCGGATCGCAATAGA+AGG 0.452566 2_1:-66240299 Msa0218790:three_prime_UTR
AGCCGAGACGGCGGGAGAAG+CGG 0.455018 2_1:+66246870 None:intergenic
GGAGGAAGGAGCGTGATGTT+TGG 0.455035 2_1:+66246964 None:intergenic
AAGAAACAAAACCAGTTCAA+TGG 0.455114 2_1:-66240984 Msa0218790:CDS
CTTGTTAGTAGAAGTAAGGA+AGG 0.456954 2_1:-66246755 Msa0218790:CDS
GTGTTACAGTTGTTGAAAAT+GGG 0.458376 2_1:+66247309 None:intergenic
GGAGAGATGAGCAGAGGTTG+AGG 0.463067 2_1:+66247027 None:intergenic
CTGTGGATTGGTGGACCTTA+GGG 0.463222 2_1:-66240857 Msa0218790:CDS
TTTGCCGTGGCTGGCACGGT+GGG 0.463953 2_1:+66240729 None:intergenic
GCGTGATGTTTGGTGGTGGT+TGG 0.465818 2_1:+66246974 None:intergenic
TAGCTAGCTAGTTGAATTCA+GGG 0.467070 2_1:-66240261 Msa0218790:three_prime_UTR
TGATGTTTGGTGGTGGTTGG+AGG 0.467304 2_1:+66246977 None:intergenic
TGACATGGACCTAACATCAA+TGG 0.468421 2_1:+66240941 None:intergenic
GTATAAGGAGGTGGAACATA+AGG 0.469895 2_1:+66240576 None:intergenic
TTCTCCCGCCGTCTCGGCTC+CGG 0.470534 2_1:-66246866 Msa0218790:CDS
CGGGAGAAGCGGAGGTCGGA+GGG 0.472276 2_1:+66246881 None:intergenic
CACGCTGGTCCGCCATTCAC+CGG 0.472726 2_1:-66246937 Msa0218790:CDS
TTGATCCTAGCCTTCTTGCT+GGG 0.474888 2_1:+66240676 None:intergenic
GGTTCAATGAATCCGCCGTC+AGG 0.475293 2_1:-66246574 Msa0218790:intron
CTACCATTGATGCTGCGAAA+TGG 0.477406 2_1:-66246667 Msa0218790:CDS
AAAGATTCCGGCGATGTTTG+CGG 0.478593 2_1:-66246801 Msa0218790:CDS
TAATAATCAACAGGAGTTTG+TGG 0.481895 2_1:+66240519 None:intergenic
AGGAGGAGGAGGGAAGGGAA+GGG 0.482202 2_1:+66246997 None:intergenic
AGAAACAAAACCAGTTCAAT+GGG 0.483738 2_1:-66240983 Msa0218790:CDS
GACATGGACCTAACATCAAT+GGG 0.485341 2_1:+66240942 None:intergenic
AGGGAAGGGAAGGGATCGAC+CGG 0.489446 2_1:+66247006 None:intergenic
CTCGCTGAACTCAACGATGA+TGG 0.490977 2_1:-66246824 Msa0218790:CDS
TTCGGATTGGATCCGGTGAA+TGG 0.492447 2_1:+66246925 None:intergenic
TGTTATGATATAAGTGGGGT+TGG 0.493281 2_1:+66247242 None:intergenic
CACTGCTGGGACTATACAGT+TGG 0.494527 2_1:+66241037 None:intergenic
TCTTTCTCAAAACGGGGAGA+TGG 0.497036 2_1:+66247332 None:intergenic
GGTTGGAAACAAGACACTGC+TGG 0.499710 2_1:+66241023 None:intergenic
AAACCCGACTGCAGGGGAGC+CGG 0.500985 2_1:-66240313 Msa0218790:three_prime_UTR
AGGGGTGGATGCGACGAGAA+GGG 0.502523 2_1:+66246900 None:intergenic
AAGGGGATTCGGATTGGATC+CGG 0.502813 2_1:+66246918 None:intergenic
GAGGGGTGGATGCGACGAGA+AGG 0.505089 2_1:+66246899 None:intergenic
TGGAGGCGAAGCTTAGGCTC+TGG 0.505224 2_1:+66247107 None:intergenic
GGTTGGGAATGGGTTGAAGA+AGG 0.506257 2_1:+66247259 None:intergenic
GACATGGTAGTGCTGTGGAT+TGG 0.510805 2_1:-66240869 Msa0218790:CDS
TCAACCTCTGCTCATCTCTC+CGG 0.510834 2_1:-66247025 Msa0218790:CDS
TCCGTTAGATCGTCGAGCCA+CGG 0.511025 2_1:+66247136 None:intergenic
GCGGTGATCTTCACGTTCTA+CGG 0.515516 2_1:-66246616 Msa0218790:CDS
GACCAGCGTGGGTCGGAGGA+AGG 0.516809 2_1:+66246950 None:intergenic
GAGCCACGGGTCCATTGCGT+TGG 0.516889 2_1:+66247150 None:intergenic
TTGGAGATTATTATCTGGGC+TGG 0.518010 2_1:+66241140 None:intergenic
TGGTGGTTGGAGGAGGAGGA+GGG 0.519385 2_1:+66246987 None:intergenic
GGGGTGGATGCGACGAGAAG+GGG 0.519406 2_1:+66246901 None:intergenic
TAAGGAAGGAAGAGCGAAGA+CGG 0.519461 2_1:-66246741 Msa0218790:CDS
GATCCGGCTCCCCTGCAGTC+GGG 0.519892 2_1:+66240310 None:intergenic
CGATCCGGCTCCCCTGCAGT+CGG 0.520335 2_1:+66240309 None:intergenic
CTAGCTCCTGAAATAGTGTC+TGG 0.520464 2_1:-66240897 Msa0218790:CDS
GACGAGAAGGGGATTCGGAT+TGG 0.522524 2_1:+66246912 None:intergenic
ACTTGAATACCTTCACATGT+TGG 0.522765 2_1:-66241270 Msa0218790:CDS
CCGTTAGATCGTCGAGCCAC+GGG 0.525260 2_1:+66247137 None:intergenic
GGTGACAGTGGTGGTTGTTG+TGG 0.525776 2_1:+66247087 None:intergenic
GTCGCCGGAGCCGAGACGGC+GGG 0.526860 2_1:+66246862 None:intergenic
TTTCAGGAGCTAGGTATTCG+TGG 0.527990 2_1:+66240907 None:intergenic
TTGTCTTTAGTATAAGGAGG+TGG 0.530328 2_1:+66240567 None:intergenic
GGCGGACCAGCGTGGGTCGG+AGG 0.530429 2_1:+66246946 None:intergenic
ATACGTGGAAACCCGACTGC+AGG 0.531761 2_1:-66240321 Msa0218790:three_prime_UTR
GGGAGAAGCGGAGGTCGGAG+GGG 0.532467 2_1:+66246882 None:intergenic
TGATGTCGCCGGAGCCGAGA+CGG 0.534164 2_1:+66246858 None:intergenic
ATGGTAGTGCTGTGGATTGG+TGG 0.535208 2_1:-66240866 Msa0218790:CDS
AATGTATTAGTTCGATCAGA+TGG 0.539764 2_1:-66241218 Msa0218790:CDS
TGAGTGTGTTATGATATAAG+TGG 0.544289 2_1:+66247236 None:intergenic
TCTTTGTCTTTAGTATAAGG+AGG 0.544592 2_1:+66240564 None:intergenic
GTTGGAAACAAGACACTGCT+GGG 0.545351 2_1:+66241024 None:intergenic
ACGGCGGGAGAAGCGGAGGT+CGG 0.545559 2_1:+66246877 None:intergenic
TACGTGGAAACCCGACTGCA+GGG 0.546280 2_1:-66240320 Msa0218790:three_prime_UTR
AATGGCGGACCAGCGTGGGT+CGG 0.549165 2_1:+66246943 None:intergenic
TTGTTGTGGAGGCGAAGCTT+AGG 0.553466 2_1:+66247101 None:intergenic
CGGTGAATGGCGGACCAGCG+TGG 0.553706 2_1:+66246938 None:intergenic
TTCTCAAAACGGGGAGATGG+AGG 0.553926 2_1:+66247335 None:intergenic
GAGCCATTTCGCAGCATCAA+TGG 0.554337 2_1:+66246664 None:intergenic
ATGGGCTCAGCAACAAACTC+AGG 0.554582 2_1:+66240960 None:intergenic
TAAGGAGGTGGAACATAAGG+TGG 0.555405 2_1:+66240579 None:intergenic
TAGACACAGCGCCAACGCAA+TGG 0.560362 2_1:-66247161 Msa0218790:exon
GTTATGATATAAGTGGGGTT+GGG 0.561605 2_1:+66247243 None:intergenic
TTCAGGAGCTAGGTATTCGT+GGG 0.562408 2_1:+66240908 None:intergenic
GGAAGGAGCGTGATGTTTGG+TGG 0.565321 2_1:+66246967 None:intergenic
CATTCTCAGGCTTCAGATCA+CGG 0.566342 2_1:+66241237 None:intergenic
GAGTGTGTTATGATATAAGT+GGG 0.566477 2_1:+66247237 None:intergenic
AAGGACCCAGCAAGAAGGCT+AGG 0.566657 2_1:-66240681 Msa0218790:CDS
TTCGAATATAAATATCCCTA+AGG 0.566988 2_1:+66240842 None:intergenic
ATCTTCACGTTCTACGGCAA+CGG 0.568590 2_1:-66246610 Msa0218790:CDS
AGAACCCACCGTGCCAGCCA+CGG 0.572685 2_1:-66240733 Msa0218790:CDS
GGCGAAAGTGATGGATAAGA+AGG 0.573191 2_1:-66246780 Msa0218790:CDS
CGAGACGGCGGGAGAAGCGG+AGG 0.579319 2_1:+66246873 None:intergenic
AGGAGCGTGATGTTTGGTGG+TGG 0.581035 2_1:+66246970 None:intergenic
GGTGAATGGCGGACCAGCGT+GGG 0.588266 2_1:+66246939 None:intergenic
GGGTATTATGCATGAAGATG+AGG 0.588431 2_1:+66241058 None:intergenic
TCCTGAAATAGTGTCTGGTG+AGG 0.592404 2_1:-66240892 Msa0218790:CDS
CTCCTTCCTCCGACCCACGC+TGG 0.592942 2_1:-66246952 Msa0218790:CDS
ACTTTCGCCGCAAACATCGC+CGG 0.593418 2_1:+66246794 None:intergenic
CCCGTGGCTCGACGATCTAA+CGG 0.593957 2_1:-66247137 Msa0218790:CDS
GATGTTTGCGGCGAAAGTGA+TGG 0.594332 2_1:-66246789 Msa0218790:CDS
GACAGTGGTGGTTGTTGTGG+AGG 0.594718 2_1:+66247090 None:intergenic
ACCGTCTGAGCTTGATCGAA+CGG 0.596295 2_1:+66240428 None:intergenic
AGAGTGAGAGTAAACGGACG+TGG 0.598654 2_1:+66247284 None:intergenic
GGCAACGGCAGCAAAACAAA+CGG 0.599672 2_1:-66246595 Msa0218790:CDS
ACTGCTGGGACTATACAGTT+GGG 0.600875 2_1:+66241038 None:intergenic
ACCGTTCGATCAAGCTCAGA+CGG 0.603259 2_1:-66240429 Msa0218790:three_prime_UTR
CCTGAAATAGTGTCTGGTGA+GGG 0.604464 2_1:-66240891 Msa0218790:CDS
CAGACACTATTTCAGGAGCT+AGG 0.607384 2_1:+66240898 None:intergenic
TATCTTAAATGTGTGAATGC+GGG 0.607772 2_1:+66240458 None:intergenic
GTAGACAGAGCTGATGTCGC+CGG 0.615555 2_1:+66246847 None:intergenic
TGGTTAAGGACCCAGCAAGA+AGG 0.615648 2_1:-66240686 Msa0218790:CDS
ATACTATTCCCAACATGTGA+AGG 0.615986 2_1:+66241261 None:intergenic
AGAACGTGAAGATCACCGCC+AGG 0.616939 2_1:+66246620 None:intergenic
GATTATTATCTGGGCTGGTG+TGG 0.621703 2_1:+66241145 None:intergenic
AATTGTGAGTGTTCAGTGTG+GGG 0.622709 2_1:+66241083 None:intergenic
TCAATGGTAGCATAAAGAGT+AGG 0.628667 2_1:+66246680 None:intergenic
GCGCCAACGCAATGGACCCG+TGG 0.630733 2_1:-66247153 Msa0218790:exon
TGTGCTTCGTTTGATGTCAG+CGG 0.631625 2_1:+66247063 None:intergenic
AAATTGTGAGTGTTCAGTGT+GGG 0.632085 2_1:+66241082 None:intergenic
GAAGGCTAGGATCAATAATG+GGG 0.632594 2_1:-66240668 Msa0218790:CDS
ATCCTTATTGTGTAAATACG+TGG 0.632858 2_1:-66240336 Msa0218790:three_prime_UTR
TGAGGGACATGGTAGTGCTG+TGG 0.637250 2_1:-66240874 Msa0218790:CDS
AGGCGAAGCTTAGGCTCTGG+AGG 0.637580 2_1:+66247110 None:intergenic
TGTCGCCGGAGCCGAGACGG+CGG 0.642917 2_1:+66246861 None:intergenic
GTGGGTCCCAACAAATGACA+TGG 0.643455 2_1:+66240926 None:intergenic
GATGTCAGCGGTGGTGACAG+TGG 0.645314 2_1:+66247075 None:intergenic
AGCCGGATCGCAATAGAAGG+AGG 0.648833 2_1:-66240296 Msa0218790:three_prime_UTR
ACGTGGAAACCCGACTGCAG+GGG 0.652638 2_1:-66240319 Msa0218790:three_prime_UTR
GGATTGGATCCGGTGAATGG+CGG 0.656828 2_1:+66246928 None:intergenic
ATATCTTAAATGTGTGAATG+CGG 0.657933 2_1:+66240457 None:intergenic
AGGAGAGCTTGGATTCCACA+TGG 0.666859 2_1:-66240485 Msa0218790:three_prime_UTR
AGTGTGTTATGATATAAGTG+GGG 0.685149 2_1:+66247238 None:intergenic
GTCAGCGGTGGTGACAGTGG+TGG 0.693724 2_1:+66247078 None:intergenic
TCGACCGGAGAGATGAGCAG+AGG 0.695003 2_1:+66247021 None:intergenic
GCTTCGTTTGATGTCAGCGG+TGG 0.696002 2_1:+66247066 None:intergenic
TGGAAGTGCTTACCTGACGG+CGG 0.700077 2_1:+66246562 None:intergenic
ATTAACTCTAGCAAATATCG+TGG 0.701691 2_1:-66240778 Msa0218790:CDS
AATGGGTCTTTCTCAAAACG+GGG 0.711732 2_1:+66247326 None:intergenic
GTGAATGCGGGTTATCCATG+TGG 0.721569 2_1:+66240470 None:intergenic
AAGGCTAGGATCAATAATGG+GGG 0.726443 2_1:-66240667 Msa0218790:CDS
ATAGTGTCTGGTGAGGGACA+TGG 0.727885 2_1:-66240885 Msa0218790:CDS
CAAATTGTGAGTGTTCAGTG+TGG 0.729678 2_1:+66241081 None:intergenic
CATCATCGTTGAGTTCAGCG+AGG 0.734744 2_1:+66246825 None:intergenic
ACACAATAAGGATATCAGTG+TGG 0.754137 2_1:+66240346 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTTTAATAAT+TGG + chr2_1:66243841-66243860 None:intergenic 0.0%
!! ATTAAAAAAATATACATTTG+AGG + chr2_1:66242028-66242047 None:intergenic 10.0%
!! TTAATTACACTTTAAATAAT+TGG - chr2_1:66243142-66243161 Msa0218790:intron 10.0%
!! AAATAAGAATAAGAAATAAA+AGG + chr2_1:66243488-66243507 None:intergenic 10.0%
!! ATTAAAAAAAAATAAAAACC+GGG - chr2_1:66243844-66243863 Msa0218790:intron 10.0%
!!! AAATAGTACTTTTTTTTTTA+TGG + chr2_1:66244408-66244427 None:intergenic 10.0%
!!! TTTAAATTTTGAACTTTTTT+TGG + chr2_1:66244564-66244583 None:intergenic 10.0%
!!! AGTTCTAAATTATATTTTTT+TGG + chr2_1:66244689-66244708 None:intergenic 10.0%
!! TATAATAAAAATTCTTGAAT+TGG + chr2_1:66245273-66245292 None:intergenic 10.0%
!!! AAAAATTATTATGCTTTTTT+TGG - chr2_1:66245410-66245429 Msa0218790:intron 10.0%
!!! TTTATATTCGAATTATTTTA+TGG - chr2_1:66246605-66246624 Msa0218790:CDS 10.0%
!! AACAATGTAATTATATATGT+TGG + chr2_1:66241030-66241049 None:intergenic 15.0%
!! TAAACAAAATGATTTATGTT+TGG + chr2_1:66241780-66241799 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2_1:66242386-66242405 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr2_1:66242385-66242404 Msa0218790:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2_1:66242409-66242428 Msa0218790:intron 15.0%
!!! ATTTTACAACAAAATAATTG+AGG - chr2_1:66243814-66243833 Msa0218790:intron 15.0%
!!! AAAAAAAAGTACTATTTGTT+TGG - chr2_1:66244411-66244430 Msa0218790:intron 15.0%
!! ATTACATTGTGAATTTAAAT+AGG - chr2_1:66244632-66244651 Msa0218790:intron 15.0%
!! ATTTAAATTGTATATACCAA+CGG - chr2_1:66244756-66244775 Msa0218790:intron 15.0%
!! ATAGAATCTGTTAAAAAAAA+AGG + chr2_1:66246126-66246145 None:intergenic 15.0%
!! TAAATATAAAGACAATAGTA+TGG + chr2_1:66247263-66247282 None:intergenic 15.0%
!!! TTGATGACAAATTAAATTAA+TGG - chr2_1:66247336-66247355 Msa0218790:five_prime_UTR 15.0%
!! TGATGACAAATTAAATTAAT+GGG - chr2_1:66247337-66247356 Msa0218790:five_prime_UTR 15.0%
!! TGTTATGAAAGTTATGATAA+CGG + chr2_1:66241235-66241254 None:intergenic 20.0%
!!! AAAAAACAATTTTGTTAAGC+CGG + chr2_1:66241420-66241439 None:intergenic 20.0%
!! AAAGAATGAGAATTGATAAA+GGG + chr2_1:66241689-66241708 None:intergenic 20.0%
!! TAAAGAATGAGAATTGATAA+AGG + chr2_1:66241690-66241709 None:intergenic 20.0%
!! TAGATGATTGAGTATATTTA+TGG - chr2_1:66241936-66241955 Msa0218790:intron 20.0%
!!! TGTCTTTAAGACATTTATTA+AGG + chr2_1:66242053-66242072 None:intergenic 20.0%
!! CAATTCAATTCATAAAGTAA+AGG - chr2_1:66242102-66242121 Msa0218790:intron 20.0%
!!! GAATCAAACTTTTTTTTTGA+GGG + chr2_1:66242218-66242237 None:intergenic 20.0%
!!! AGAATCAAACTTTTTTTTTG+AGG + chr2_1:66242219-66242238 None:intergenic 20.0%
!!! AATTTTGGTTTTTTCTATAG+AGG + chr2_1:66242273-66242292 None:intergenic 20.0%
!! AATGATTAAGAGAAAGATAA+TGG - chr2_1:66242352-66242371 Msa0218790:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr2_1:66242395-66242414 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr2_1:66242472-66242491 Msa0218790:intron 20.0%
!! GAGTATTAATATATTGACAT+TGG - chr2_1:66242528-66242547 Msa0218790:intron 20.0%
!! AATAAAATTGTCAATACACT+CGG + chr2_1:66242578-66242597 None:intergenic 20.0%
!! ACTATAATGAAATTTCATTG+AGG + chr2_1:66242742-66242761 None:intergenic 20.0%
!! AAATATGATCAAAGTAAGTT+AGG - chr2_1:66242949-66242968 Msa0218790:intron 20.0%
!! TAAGAATAAGAAATAAAAGG+TGG + chr2_1:66243485-66243504 None:intergenic 20.0%
!!! GTACTTTTTTTTTTATGGTT+TGG + chr2_1:66244403-66244422 None:intergenic 20.0%
!!! TTCTATTTAAGATCATTTGA+TGG - chr2_1:66244825-66244844 Msa0218790:intron 20.0%
!! GATTAATTTATATGTTTCGA+TGG + chr2_1:66244880-66244899 None:intergenic 20.0%
!!! ATACCATCAACTTTTTAAAA+TGG - chr2_1:66244912-66244931 Msa0218790:intron 20.0%
!!! ATTCCATTTTAAAAAGTTGA+TGG + chr2_1:66244918-66244937 None:intergenic 20.0%
!! GTATAAATTTACTTAATGAG+AGG - chr2_1:66245040-66245059 Msa0218790:intron 20.0%
!!! TTATGAACACAATTTCTTTT+TGG + chr2_1:66245234-66245253 None:intergenic 20.0%
!!! GACATTGAAAATAATGTTTT+GGG + chr2_1:66245761-66245780 None:intergenic 20.0%
!!! TGACATTGAAAATAATGTTT+TGG + chr2_1:66245762-66245781 None:intergenic 20.0%
!!! ATATAAGAATATTGGTTGTT+AGG + chr2_1:66245957-66245976 None:intergenic 20.0%
!! AAGAATGCATATAAGAATAT+TGG + chr2_1:66245965-66245984 None:intergenic 20.0%
!! ATATTCTTATATGCATTCTT+CGG - chr2_1:66245965-66245984 Msa0218790:intron 20.0%
!! TGATTATTATTGATCACAAT+AGG - chr2_1:66246931-66246950 Msa0218790:CDS 20.0%
!! CTATTGTCTTTATATTTAAG+AGG - chr2_1:66247265-66247284 Msa0218790:five_prime_UTR 20.0%
!! TGTCTAACTAAGTATTTTCT+CGG + chr2_1:66240261-66240280 None:intergenic 25.0%
! TAATTACGATGATGCTAAAA+TGG + chr2_1:66240897-66240916 None:intergenic 25.0%
! TATAATTACATTGTTACGAG+TGG - chr2_1:66241035-66241054 Msa0218790:CDS 25.0%
! AGTGAAAATAGAAACTAAGA+GGG - chr2_1:66241148-66241167 Msa0218790:CDS 25.0%
! ATCATAACTTTCATAACAGA+CGG - chr2_1:66241237-66241256 Msa0218790:CDS 25.0%
!!! CTAATTCATGTTTGTTTTGT+AGG - chr2_1:66241286-66241305 Msa0218790:CDS 25.0%
! ACTAAAATAGACATAGCTAA+AGG + chr2_1:66241721-66241740 None:intergenic 25.0%
!! TGAGAGAATTGATTTATGTT+TGG + chr2_1:66241824-66241843 None:intergenic 25.0%
!! TAAAAGTAATACTTTGGAAG+TGG - chr2_1:66242415-66242434 Msa0218790:intron 25.0%
!! ACTCGTTGTATCATATTTTA+GGG - chr2_1:66242601-66242620 Msa0218790:intron 25.0%
!!! TCATATTTTAGGGACTAATA+TGG - chr2_1:66242611-66242630 Msa0218790:intron 25.0%
!!! CATATTTTAGGGACTAATAT+GGG - chr2_1:66242612-66242631 Msa0218790:intron 25.0%
!!! ATATTTTAGGGACTAATATG+GGG - chr2_1:66242613-66242632 Msa0218790:intron 25.0%
!!! CGTAAAATTAAATTTTGACG+TGG - chr2_1:66243053-66243072 Msa0218790:intron 25.0%
! TGTTGAATGAAAAAAACCAT+TGG + chr2_1:66243452-66243471 None:intergenic 25.0%
! AATAAGAAATAAAAGGTGGT+GGG + chr2_1:66243481-66243500 None:intergenic 25.0%
! TTTCTCTATAAATAGACACT+TGG + chr2_1:66243750-66243769 None:intergenic 25.0%
!!! AAGAAGATTTCTGAAATGAT+GGG + chr2_1:66243895-66243914 None:intergenic 25.0%
! CGCTAGAATTTACAAATATA+TGG - chr2_1:66244513-66244532 Msa0218790:intron 25.0%
! TTCACAATGTAATTAGTTGA+TGG + chr2_1:66244625-66244644 None:intergenic 25.0%
! TAAAAAAAGAATTACACCGT+TGG + chr2_1:66244775-66244794 None:intergenic 25.0%
! TCATGTATGTTCTTTCTTTA+TGG - chr2_1:66245206-66245225 Msa0218790:intron 25.0%
! CATGTATGTTCTTTCTTTAT+GGG - chr2_1:66245207-66245226 Msa0218790:intron 25.0%
! ATGTATGTTCTTTCTTTATG+GGG - chr2_1:66245208-66245227 Msa0218790:intron 25.0%
!!! TATTATGCTGTCTTTAGAAT+TGG - chr2_1:66245454-66245473 Msa0218790:intron 25.0%
!!! ATTATGCTGTCTTTAGAATT+GGG - chr2_1:66245455-66245474 Msa0218790:intron 25.0%
! CTAAGAGAAGGTTTAATTAT+TGG + chr2_1:66246001-66246020 None:intergenic 25.0%
!!! AGAACTTGTTTTGCAATAAT+TGG + chr2_1:66246065-66246084 None:intergenic 25.0%
!! AGTTCTACTTTGGATTTTTA+AGG - chr2_1:66246079-66246098 Msa0218790:intron 25.0%
!!! TATCATCACATTTTAATGAG+AGG + chr2_1:66246268-66246287 None:intergenic 25.0%
! TTGATTGGAGATTATTATCT+GGG + chr2_1:66246303-66246322 None:intergenic 25.0%
! TTTGATTGGAGATTATTATC+TGG + chr2_1:66246304-66246323 None:intergenic 25.0%
! TTCGAATATAAATATCCCTA+AGG + chr2_1:66246597-66246616 None:intergenic 25.0%
!!! ATTTTTTCAAGGTGTCAATT+GGG - chr2_1:66246814-66246833 Msa0218790:CDS 25.0%
! TCTTCTTTGTCTTTAGTATA+AGG + chr2_1:66246878-66246897 None:intergenic 25.0%
! TGTGATCAATAATAATCAAC+AGG + chr2_1:66246929-66246948 None:intergenic 25.0%
! ATATCTTAAATGTGTGAATG+CGG + chr2_1:66246982-66247001 None:intergenic 25.0%
! ATGGTGACAAATTAACTTAA+CGG + chr2_1:66247244-66247263 None:intergenic 25.0%
AAAATGGGTCTTTCTCAAAA+CGG + chr2_1:66240115-66240134 None:intergenic 30.0%
GTGTTACAGTTGTTGAAAAT+GGG + chr2_1:66240130-66240149 None:intergenic 30.0%
AGTGTTACAGTTGTTGAAAA+TGG + chr2_1:66240131-66240150 None:intergenic 30.0%
AGTGTGTTATGATATAAGTG+GGG + chr2_1:66240201-66240220 None:intergenic 30.0%
GAGTGTGTTATGATATAAGT+GGG + chr2_1:66240202-66240221 None:intergenic 30.0%
TGAGTGTGTTATGATATAAG+TGG + chr2_1:66240203-66240222 None:intergenic 30.0%
GAGTGAAAATAGAAACTAAG+AGG - chr2_1:66241147-66241166 Msa0218790:CDS 30.0%
GTAGATTGAAAACGGAAAAT+GGG + chr2_1:66241329-66241348 None:intergenic 30.0%
! GTACTATGTTTAGAATCAAC+CGG - chr2_1:66241398-66241417 Msa0218790:intron 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG + chr2_1:66241535-66241554 None:intergenic 30.0%
! GATTCATGGAGAATTGTTTT+TGG + chr2_1:66241598-66241617 None:intergenic 30.0%
! GTTTAAGGAGAATTGATTCA+TGG + chr2_1:66241612-66241631 None:intergenic 30.0%
AAACCTATACACGTTGTTTA+AGG + chr2_1:66241627-66241646 None:intergenic 30.0%
ATATTCAAAGCTGAACCAAA+CGG - chr2_1:66241883-66241902 Msa0218790:intron 30.0%
GTAAAAATTAAGTGTCCGTT+TGG + chr2_1:66241901-66241920 None:intergenic 30.0%
!! ATTAAGTTGACTTAGTAGCT+AGG - chr2_1:66242127-66242146 Msa0218790:intron 30.0%
!! TTAAGTTGACTTAGTAGCTA+GGG - chr2_1:66242128-66242147 Msa0218790:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr2_1:66242310-66242329 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr2_1:66242311-66242330 Msa0218790:intron 30.0%
!! AAGCGACACTCATTTTAAAA+CGG - chr2_1:66242502-66242521 Msa0218790:intron 30.0%
CTAAAATATGATACAACGAG+TGG + chr2_1:66242602-66242621 None:intergenic 30.0%
! CACTCGTTGTATCATATTTT+AGG - chr2_1:66242600-66242619 Msa0218790:intron 30.0%
! CAAAATTGCACGTTTTCAAA+TGG - chr2_1:66242973-66242992 Msa0218790:intron 30.0%
TTCAAATGGATCATCTATTG+CGG - chr2_1:66242987-66243006 Msa0218790:intron 30.0%
! TAGCATTTTACCTAAATCGT+AGG + chr2_1:66243190-66243209 None:intergenic 30.0%
AAGTCTTAGACCATTTACAA+TGG - chr2_1:66243326-66243345 Msa0218790:intron 30.0%
! ATGTTGGTTACCATTGTAAA+TGG + chr2_1:66243339-66243358 None:intergenic 30.0%
AATGAAAAAAACCATTGGAG+AGG + chr2_1:66243447-66243466 None:intergenic 30.0%
ATAAGAAATAAAAGGTGGTG+GGG + chr2_1:66243480-66243499 None:intergenic 30.0%
GAATAAGAAATAAAAGGTGG+TGG + chr2_1:66243482-66243501 None:intergenic 30.0%
GAAGAAGATAGTGAAAAACT+TGG - chr2_1:66243695-66243714 Msa0218790:intron 30.0%
!! GAAGAAGATTTCTGAAATGA+TGG + chr2_1:66243896-66243915 None:intergenic 30.0%
GAGGAAAATAGTACTTGTTT+AGG + chr2_1:66244317-66244336 None:intergenic 30.0%
ATTTCTCGTTATCACACAAT+AGG - chr2_1:66244448-66244467 Msa0218790:intron 30.0%
!! TCCTCTAAGATATGATCAAT+GGG + chr2_1:66244958-66244977 None:intergenic 30.0%
!! TTCCTCTAAGATATGATCAA+TGG + chr2_1:66244959-66244978 None:intergenic 30.0%
TGATCATATCTTAGAGGAAA+TGG - chr2_1:66244960-66244979 Msa0218790:intron 30.0%
GGATATGTTCAACCAAAATT+TGG - chr2_1:66245090-66245109 Msa0218790:intron 30.0%
! CAAACACTAGAACCAAATTT+TGG + chr2_1:66245105-66245124 None:intergenic 30.0%
CTAAATGCATAAAGAAGACT+TGG + chr2_1:66245373-66245392 None:intergenic 30.0%
TCTAAAGACAGCATAATACT+AGG + chr2_1:66245452-66245471 None:intergenic 30.0%
TAACTCTTGTGACATACTTT+AGG - chr2_1:66245553-66245572 Msa0218790:intron 30.0%
AACTCTTGTGACATACTTTA+GGG - chr2_1:66245554-66245573 Msa0218790:intron 30.0%
!! TTTTCTTTTCCTAAAGTGCT+TGG - chr2_1:66245835-66245854 Msa0218790:intron 30.0%
! AGAATATTGGTTGTTAGGTT+AGG + chr2_1:66245952-66245971 None:intergenic 30.0%
TTGCAAAACAAGTTCTACTT+TGG - chr2_1:66246069-66246088 Msa0218790:intron 30.0%
AATGTATTAGTTCGATCAGA+TGG - chr2_1:66246218-66246237 Msa0218790:intron 30.0%
! TTCTTCTTTCTTTTGCGTTT+TGG + chr2_1:66246437-66246456 None:intergenic 30.0%
AAGAAACAAAACCAGTTCAA+TGG - chr2_1:66246452-66246471 Msa0218790:intron 30.0%
AGAAACAAAACCAGTTCAAT+GGG - chr2_1:66246453-66246472 Msa0218790:intron 30.0%
ATTAACTCTAGCAAATATCG+TGG - chr2_1:66246658-66246677 Msa0218790:CDS 30.0%
AGATCTTATCTCACAGTTAT+TGG - chr2_1:66246730-66246749 Msa0218790:CDS 30.0%
! TATCTCACAGTTATTGGTTA+AGG - chr2_1:66246736-66246755 Msa0218790:CDS 30.0%
!!! AAACACCACTCATTTTTTCA+AGG - chr2_1:66246803-66246822 Msa0218790:CDS 30.0%
!!! CATTTTTTCAAGGTGTCAAT+TGG - chr2_1:66246813-66246832 Msa0218790:CDS 30.0%
TCTTTGTCTTTAGTATAAGG+AGG + chr2_1:66246875-66246894 None:intergenic 30.0%
TAATAATCAACAGGAGTTTG+TGG + chr2_1:66246920-66246939 None:intergenic 30.0%
TATCTTAAATGTGTGAATGC+GGG + chr2_1:66246981-66247000 None:intergenic 30.0%
CAAAATACTGAACTTGAATC+TGG - chr2_1:66247044-66247063 Msa0218790:CDS 30.0%
ATCCTTATTGTGTAAATACG+TGG - chr2_1:66247100-66247119 Msa0218790:CDS 30.0%
TTCCACGTATTTACACAATA+AGG + chr2_1:66247105-66247124 None:intergenic 30.0%
! GAGATGGAGGAAATAACTTT+TGG + chr2_1:66240091-66240110 None:intergenic 35.0%
AAATGGGTCTTTCTCAAAAC+GGG + chr2_1:66240114-66240133 None:intergenic 35.0%
GTTATGATATAAGTGGGGTT+GGG + chr2_1:66240196-66240215 None:intergenic 35.0%
TGTTATGATATAAGTGGGGT+TGG + chr2_1:66240197-66240216 None:intergenic 35.0%
CTTGTTAGTAGAAGTAAGGA+AGG - chr2_1:66240681-66240700 Msa0218790:CDS 35.0%
GCATAAAGAGTAGGCAAAAA+AGG + chr2_1:66240750-66240769 None:intergenic 35.0%
TCAATGGTAGCATAAAGAGT+AGG + chr2_1:66240759-66240778 None:intergenic 35.0%
GTGTCAGACACTAACATATA+TGG + chr2_1:66241008-66241027 None:intergenic 35.0%
GTTTGAGCTTGTATTCTTGA+TGG - chr2_1:66241107-66241126 Msa0218790:CDS 35.0%
GAAAATAGAAACTAAGAGGG+AGG - chr2_1:66241151-66241170 Msa0218790:CDS 35.0%
AATGAAAGACATGAAAGCGA+CGG - chr2_1:66241260-66241279 Msa0218790:CDS 35.0%
TGAAAACGGAAAATGGGAAA+CGG + chr2_1:66241323-66241342 None:intergenic 35.0%
CGTAGATTGAAAACGGAAAA+TGG + chr2_1:66241330-66241349 None:intergenic 35.0%
! TTTTCCGTTTTCAATCTACG+TGG - chr2_1:66241330-66241349 Msa0218790:intron 35.0%
! TTTCCGTTTTCAATCTACGT+GGG - chr2_1:66241331-66241350 Msa0218790:intron 35.0%
!! ACCAATACAAGCATTGACTT+AGG - chr2_1:66241457-66241476 Msa0218790:intron 35.0%
!! CCAATACAAGCATTGACTTA+GGG - chr2_1:66241458-66241477 Msa0218790:intron 35.0%
!! TGAACCAAACACGTTGTTTT+TGG + chr2_1:66241551-66241570 None:intergenic 35.0%
!!! TCATGGAGAATTGTTTTTGG+AGG + chr2_1:66241595-66241614 None:intergenic 35.0%
TCTCCTTAAACAACGTGTAT+AGG - chr2_1:66241621-66241640 Msa0218790:intron 35.0%
! GAGGGAGTAGTTGTTAATTT+TGG + chr2_1:66242288-66242307 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr2_1:66242438-66242457 Msa0218790:intron 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - chr2_1:66242506-66242525 Msa0218790:intron 35.0%
GGTGTTTACCCATTAAGAAT+GGG - chr2_1:66242634-66242653 Msa0218790:intron 35.0%
GTGTTTACCCATTAAGAATG+GGG - chr2_1:66242635-66242654 Msa0218790:intron 35.0%
TGTTTACCCATTAAGAATGG+GGG - chr2_1:66242636-66242655 Msa0218790:intron 35.0%
ATCACTTCTTGTAGTTCTCA+TGG - chr2_1:66242710-66242729 Msa0218790:intron 35.0%
TCAACTGTGTCATGTATTGT+GGG + chr2_1:66242776-66242795 None:intergenic 35.0%
! ATGCATTGACATGCGTAATA+GGG + chr2_1:66242799-66242818 None:intergenic 35.0%
! TATGCATTGACATGCGTAAT+AGG + chr2_1:66242800-66242819 None:intergenic 35.0%
TCAAATGGATCATCTATTGC+GGG - chr2_1:66242988-66243007 Msa0218790:intron 35.0%
AACACTCACTCATCATGTTT+AGG - chr2_1:66243261-66243280 Msa0218790:intron 35.0%
! ACTCATCATGTTTAGGACTT+AGG - chr2_1:66243268-66243287 Msa0218790:intron 35.0%
!! TGTTGAAGGGTGTTTAATGT+TGG + chr2_1:66243355-66243374 None:intergenic 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG + chr2_1:66243368-66243387 None:intergenic 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG + chr2_1:66243369-66243388 None:intergenic 35.0%
GTGTTGGGAATTGAAAAAGT+GGG + chr2_1:66243378-66243397 None:intergenic 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG + chr2_1:66243379-66243398 None:intergenic 35.0%
TTAAGAGAGAGAAGATGATG+TGG + chr2_1:66243402-66243421 None:intergenic 35.0%
TTCAACTTTAACCTCTCCAA+TGG - chr2_1:66243433-66243452 Msa0218790:intron 35.0%
GACACTTGGTTCATTTCATT+TGG + chr2_1:66243736-66243755 None:intergenic 35.0%
! TTTTTGCATGCCATGTGAAA+TGG - chr2_1:66243962-66243981 Msa0218790:intron 35.0%
AGCTTATCTCAGTTGTTAGT+TGG - chr2_1:66244340-66244359 Msa0218790:intron 35.0%
TATCTCAGTTGTTAGTTGGT+AGG - chr2_1:66244344-66244363 Msa0218790:intron 35.0%
! GTGTGATAACGAGAAATAGT+TGG + chr2_1:66244445-66244464 None:intergenic 35.0%
CCAACACAACATATAGTTGA+TGG + chr2_1:66244487-66244506 None:intergenic 35.0%
CCATCAACTATATGTTGTGT+TGG - chr2_1:66244484-66244503 Msa0218790:intron 35.0%
TAAAATGGAATTATGACCCC+CGG - chr2_1:66244927-66244946 Msa0218790:intron 35.0%
GAAATCCCGCAAAAGTTTAT+GGG + chr2_1:66245003-66245022 None:intergenic 35.0%
AGAAATCCCGCAAAAGTTTA+TGG + chr2_1:66245004-66245023 None:intergenic 35.0%
! ATAAACTTTTGCGGGATTTC+TGG - chr2_1:66245003-66245022 Msa0218790:intron 35.0%
GGTTGAACATATCCCAATAT+GGG + chr2_1:66245084-66245103 None:intergenic 35.0%
TGGTTGAACATATCCCAATA+TGG + chr2_1:66245085-66245104 None:intergenic 35.0%
!! TAGCTTTAGATGATTGTACG+TGG - chr2_1:66245303-66245322 Msa0218790:intron 35.0%
!!! TTGCTTGCTTTCATTGGTTT+TGG + chr2_1:66245347-66245366 None:intergenic 35.0%
CTAATTATTCACCCAAGAAG+GGG + chr2_1:66245604-66245623 None:intergenic 35.0%
CCTAATTATTCACCCAAGAA+GGG + chr2_1:66245605-66245624 None:intergenic 35.0%
ACCTAATTATTCACCCAAGA+AGG + chr2_1:66245606-66245625 None:intergenic 35.0%
!! ATTCTTAACTTGTGCCCTTA+AGG - chr2_1:66245719-66245738 Msa0218790:intron 35.0%
!! TTCTTAACTTGTGCCCTTAA+GGG - chr2_1:66245720-66245739 Msa0218790:intron 35.0%
TCTGATCCTCATGATTCATT+CGG - chr2_1:66245922-66245941 Msa0218790:intron 35.0%
TCTATCTCTAAGCTAAGAGA+AGG + chr2_1:66246013-66246032 None:intergenic 35.0%
ACTTGAATACCTTCACATGT+TGG - chr2_1:66246166-66246185 Msa0218790:intron 35.0%
CTTGAATACCTTCACATGTT+GGG - chr2_1:66246167-66246186 Msa0218790:intron 35.0%
ATACTATTCCCAACATGTGA+AGG + chr2_1:66246178-66246197 None:intergenic 35.0%
GATCGAACTAATACATTCTC+AGG + chr2_1:66246215-66246234 None:intergenic 35.0%
CAAAGTCTGTGAGCATTATA+TGG + chr2_1:66246244-66246263 None:intergenic 35.0%
!! TACTTGAGGAGAGTTTTGAT+TGG + chr2_1:66246318-66246337 None:intergenic 35.0%
AAATTGTGAGTGTTCAGTGT+GGG + chr2_1:66246357-66246376 None:intergenic 35.0%
!! TCTTTCTTTTGCGTTTTGGT+TGG + chr2_1:66246433-66246452 None:intergenic 35.0%
! TTAGGTCCATGTCATTTGTT+GGG - chr2_1:66246504-66246523 Msa0218790:intron 35.0%
TCATTATCCAAGCCTCTAAA+AGG + chr2_1:66246638-66246657 None:intergenic 35.0%
AAGAAGGCTAGGATCAATAA+TGG - chr2_1:66246766-66246785 Msa0218790:CDS 35.0%
AGAAGGCTAGGATCAATAAT+GGG - chr2_1:66246767-66246786 Msa0218790:CDS 35.0%
TGACACCTTGAAAAAATGAG+TGG + chr2_1:66246811-66246830 None:intergenic 35.0%
TTGTCTTTAGTATAAGGAGG+TGG + chr2_1:66246872-66246891 None:intergenic 35.0%
ACACAATAAGGATATCAGTG+TGG + chr2_1:66247093-66247112 None:intergenic 35.0%
TTAGCTAGCTAGTTGAATTC+AGG - chr2_1:66247174-66247193 Msa0218790:five_prime_UTR 35.0%
TAGCTAGCTAGTTGAATTCA+GGG - chr2_1:66247175-66247194 Msa0218790:five_prime_UTR 35.0%
CAAGCTCAATCAACATAGTT+TGG + chr2_1:66247319-66247338 None:intergenic 35.0%
AATGGGTCTTTCTCAAAACG+GGG + chr2_1:66240113-66240132 None:intergenic 40.0%
AAGGAGAGAGTGAGAGTAAA+CGG + chr2_1:66240161-66240180 None:intergenic 40.0%
ATATAAGTGGGGTTGGGAAT+GGG + chr2_1:66240190-66240209 None:intergenic 40.0%
!! CAACGATGATGGAAAGATTC+CGG - chr2_1:66240623-66240642 Msa0218790:CDS 40.0%
!! GGAGCTTGTTAGTAGAAGTA+AGG - chr2_1:66240677-66240696 Msa0218790:CDS 40.0%
!! GAAATGGCTCTGTCTTTTGA+CGG - chr2_1:66240785-66240804 Msa0218790:CDS 40.0%
!! AAATGGAAGTGCTTACCTGA+CGG + chr2_1:66240880-66240899 None:intergenic 40.0%
! GAGCTTGTATTCTTGATGGT+TGG - chr2_1:66241111-66241130 Msa0218790:CDS 40.0%
AATAGAAACTAAGAGGGAGG+AGG - chr2_1:66241154-66241173 Msa0218790:CDS 40.0%
ATAGAAACTAAGAGGGAGGA+GGG - chr2_1:66241155-66241174 Msa0218790:CDS 40.0%
TACTTCTAGATTTCCACCGT+AGG + chr2_1:66241208-66241227 None:intergenic 40.0%
AAAATGGGAAACGGTGGTTA+TGG + chr2_1:66241314-66241333 None:intergenic 40.0%
AAGTGAAGGTGACATAAGGT+GGG + chr2_1:66241358-66241377 None:intergenic 40.0%
AGACAAGTGAAGGTGACATA+AGG + chr2_1:66241362-66241381 None:intergenic 40.0%
TAATTCCAGCAGACAAGTGA+AGG + chr2_1:66241372-66241391 None:intergenic 40.0%
CCCTAAGTCAATGCTTGTAT+TGG + chr2_1:66241461-66241480 None:intergenic 40.0%
CTAGCCAAAAACAACGTGTT+TGG - chr2_1:66241544-66241563 Msa0218790:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_1:66242306-66242325 None:intergenic 40.0%
! GTGGTGTGCAGAGTATTAAT+TGG - chr2_1:66242434-66242453 Msa0218790:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr2_1:66242437-66242456 Msa0218790:intron 40.0%
!!! CGACACTCATTTTAAAACGG+AGG - chr2_1:66242505-66242524 Msa0218790:intron 40.0%
GGGTGTTTACCCATTAAGAA+TGG - chr2_1:66242633-66242652 Msa0218790:intron 40.0%
AAGCAACCCCCATTCTTAAT+GGG + chr2_1:66242645-66242664 None:intergenic 40.0%
TAAGCAACCCCCATTCTTAA+TGG + chr2_1:66242646-66242665 None:intergenic 40.0%
TAAGAATGGGGGTTGCTTAA+TGG - chr2_1:66242647-66242666 Msa0218790:intron 40.0%
GTCAACTGTGTCATGTATTG+TGG + chr2_1:66242777-66242796 None:intergenic 40.0%
CATTCATGTGCCTACGATTT+AGG - chr2_1:66243177-66243196 Msa0218790:intron 40.0%
! AGAAGATGATGTGGAGTGTT+GGG + chr2_1:66243393-66243412 None:intergenic 40.0%
TTGGTTGTTTATAGGTTGCC+CGG + chr2_1:66243865-66243884 None:intergenic 40.0%
!! GACACGTGTTGGTTGTTTAT+AGG + chr2_1:66243873-66243892 None:intergenic 40.0%
CTTCTTCTCTCCATGTGAAA+TGG - chr2_1:66243909-66243928 Msa0218790:intron 40.0%
GCATTCTGTGGCAGATTAAT+TGG - chr2_1:66244034-66244053 Msa0218790:intron 40.0%
AACTGTGTTGAATGAACTGC+TGG + chr2_1:66244088-66244107 None:intergenic 40.0%
GTTTAACCTGACAGTCAACA+GGG + chr2_1:66244135-66244154 None:intergenic 40.0%
TGTTTAACCTGACAGTCAAC+AGG + chr2_1:66244136-66244155 None:intergenic 40.0%
CACGTAAGACTATGTGCAAT+GGG + chr2_1:66244161-66244180 None:intergenic 40.0%
AGTCTTACGTGGTCAGATTT+AGG - chr2_1:66244170-66244189 Msa0218790:intron 40.0%
!! ATATGATCAATGGGCTGATC+CGG + chr2_1:66244949-66244968 None:intergenic 40.0%
GCCCATTGATCATATCTTAG+AGG - chr2_1:66244954-66244973 Msa0218790:intron 40.0%
! CCTAGACCCATAAACTTTTG+CGG - chr2_1:66244994-66245013 Msa0218790:intron 40.0%
! CTAGACCCATAAACTTTTGC+GGG - chr2_1:66244995-66245014 Msa0218790:intron 40.0%
! TGGCTTTTGCTTGCTTTCAT+TGG + chr2_1:66245353-66245372 None:intergenic 40.0%
ATGACAAACAGAGCAAAAGC+TGG + chr2_1:66245495-66245514 None:intergenic 40.0%
AATGTCTTTCTCCCCTTCTT+GGG - chr2_1:66245590-66245609 Msa0218790:intron 40.0%
CCCTTCTTGGGTGAATAATT+AGG - chr2_1:66245602-66245621 Msa0218790:intron 40.0%
!! GTGTTAACTTGTGCCCTTAA+GGG + chr2_1:66245736-66245755 None:intergenic 40.0%
!! AGTGTTAACTTGTGCCCTTA+AGG + chr2_1:66245737-66245756 None:intergenic 40.0%
!! TTTCCTAAAGTGCTTGGTGT+TGG - chr2_1:66245841-66245860 Msa0218790:intron 40.0%
CTACTACTCCATTGCTTGTT+TGG + chr2_1:66245867-66245886 None:intergenic 40.0%
AGTAGTAGCCCACAGTTATA+CGG - chr2_1:66245879-66245898 Msa0218790:intron 40.0%
TGAATCATGAGGATCAGACA+GGG + chr2_1:66245920-66245939 None:intergenic 40.0%
ATGAATCATGAGGATCAGAC+AGG + chr2_1:66245921-66245940 None:intergenic 40.0%
ATCCTCATGATTCATTCGGT+AGG - chr2_1:66245926-66245945 Msa0218790:intron 40.0%
ATGCATTCTTCGGATCATGT+TGG - chr2_1:66245975-66245994 Msa0218790:intron 40.0%
!! CTATGCATCAGAAGTGTTGA+TGG - chr2_1:66246142-66246161 Msa0218790:intron 40.0%
TTGGAGATTATTATCTGGGC+TGG + chr2_1:66246299-66246318 None:intergenic 40.0%
!!! TGTTCAGTGTGGGGATTTTT+TGG + chr2_1:66246347-66246366 None:intergenic 40.0%
AATTGTGAGTGTTCAGTGTG+GGG + chr2_1:66246356-66246375 None:intergenic 40.0%
CAAATTGTGAGTGTTCAGTG+TGG + chr2_1:66246358-66246377 None:intergenic 40.0%
GGGTATTATGCATGAAGATG+AGG + chr2_1:66246381-66246400 None:intergenic 40.0%
GACATGGACCTAACATCAAT+GGG + chr2_1:66246497-66246516 None:intergenic 40.0%
TGACATGGACCTAACATCAA+TGG + chr2_1:66246498-66246517 None:intergenic 40.0%
! GTTAGGTCCATGTCATTTGT+TGG - chr2_1:66246503-66246522 Msa0218790:intron 40.0%
!!! TATGGTGTCACACCTTTTAG+AGG - chr2_1:66246623-66246642 Msa0218790:CDS 40.0%
! TGAGATAAGATCTTTTGCCG+TGG + chr2_1:66246723-66246742 None:intergenic 40.0%
GAAGGCTAGGATCAATAATG+GGG - chr2_1:66246768-66246787 Msa0218790:CDS 40.0%
AAGGCTAGGATCAATAATGG+GGG - chr2_1:66246769-66246788 Msa0218790:CDS 40.0%
! GTGTCAATTGGGCATTGTTA+AGG - chr2_1:66246825-66246844 Msa0218790:CDS 40.0%
GTATAAGGAGGTGGAACATA+AGG + chr2_1:66246863-66246882 None:intergenic 40.0%
TTGATCACAATAGGAGAGCT+TGG - chr2_1:66246940-66246959 Msa0218790:CDS 40.0%
TCTTTCTCAAAACGGGGAGA+TGG + chr2_1:66240107-66240126 None:intergenic 45.0%
GATATAAGTGGGGTTGGGAA+TGG + chr2_1:66240191-66240210 None:intergenic 45.0%
TGTGCTTCGTTTGATGTCAG+CGG + chr2_1:66240376-66240395 None:intergenic 45.0%
AAAGATTCCGGCGATGTTTG+CGG - chr2_1:66240635-66240654 Msa0218790:CDS 45.0%
!! GGCGAAAGTGATGGATAAGA+AGG - chr2_1:66240656-66240675 Msa0218790:CDS 45.0%
TAAGGAAGGAAGAGCGAAGA+CGG - chr2_1:66240695-66240714 Msa0218790:CDS 45.0%
CTACCATTGATGCTGCGAAA+TGG - chr2_1:66240769-66240788 Msa0218790:CDS 45.0%
!! CTTTTGACGGAGTTTTGTCC+TGG - chr2_1:66240798-66240817 Msa0218790:CDS 45.0%
ATCTTCACGTTCTACGGCAA+CGG - chr2_1:66240826-66240845 Msa0218790:CDS 45.0%
TAGAAACTAAGAGGGAGGAG+GGG - chr2_1:66241156-66241175 Msa0218790:CDS 45.0%
GGAATGTGCAGAAGATCCTA+CGG - chr2_1:66241189-66241208 Msa0218790:CDS 45.0%
AAACGGAAAATGGGAAACGG+TGG + chr2_1:66241320-66241339 None:intergenic 45.0%
GGTCCCACGTAGATTGAAAA+CGG + chr2_1:66241337-66241356 None:intergenic 45.0%
CAAGTGAAGGTGACATAAGG+TGG + chr2_1:66241359-66241378 None:intergenic 45.0%
TCTCAGAAGCCAAACCAAAC+AGG + chr2_1:66241484-66241503 None:intergenic 45.0%
! AGTTGACTTAGTAGCTAGGG+TGG - chr2_1:66242131-66242150 Msa0218790:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_1:66242307-66242326 None:intergenic 45.0%
CTGTGTCATGTATTGTGGGA+CGG + chr2_1:66242772-66242791 None:intergenic 45.0%
ATGGATCATCTATTGCGGGA+CGG - chr2_1:66242992-66243011 Msa0218790:intron 45.0%
CGGTTAAAGTAAGCCAAAGC+TGG + chr2_1:66243083-66243102 None:intergenic 45.0%
ACACACATCACGGAATCACA+CGG + chr2_1:66243103-66243122 None:intergenic 45.0%
GTGCTATCTCACACACATCA+CGG + chr2_1:66243113-66243132 None:intergenic 45.0%
AGTCAAAAAGACACCTACCG+AGG - chr2_1:66243219-66243238 Msa0218790:intron 45.0%
!! TGAGTAATGAGTGCTGACCT+CGG + chr2_1:66243239-66243258 None:intergenic 45.0%
!! CAGCTAGCTAGCTTCAGTTT+TGG - chr2_1:66243296-66243315 Msa0218790:intron 45.0%
GAGAAGATGATGTGGAGTGT+TGG + chr2_1:66243394-66243413 None:intergenic 45.0%
! TGAAATGATGGGACACGTGT+TGG + chr2_1:66243884-66243903 None:intergenic 45.0%
ATAGTGCTCGCCATTTCACA+TGG + chr2_1:66243922-66243941 None:intergenic 45.0%
GTGAAATGGCGAGCACTATT+TGG - chr2_1:66243923-66243942 Msa0218790:intron 45.0%
AGAATGCTCGCCATTTCACA+TGG + chr2_1:66243975-66243994 None:intergenic 45.0%
TGGACGAGAGAGAGGATTAA+CGG + chr2_1:66244068-66244087 None:intergenic 45.0%
GTTTCAACATGCCATTGCAG+TGG - chr2_1:66244105-66244124 Msa0218790:intron 45.0%
AACAGGGAAAACCACTGCAA+TGG + chr2_1:66244119-66244138 None:intergenic 45.0%
CCACGTAAGACTATGTGCAA+TGG + chr2_1:66244162-66244181 None:intergenic 45.0%
! CCATTGCACATAGTCTTACG+TGG - chr2_1:66244159-66244178 Msa0218790:intron 45.0%
ACAACTGAGATAAGCTCACG+AGG + chr2_1:66244336-66244355 None:intergenic 45.0%
!! TATGATCAATGGGCTGATCC+GGG + chr2_1:66244948-66244967 None:intergenic 45.0%
CCGCAAAAGTTTATGGGTCT+AGG + chr2_1:66244997-66245016 None:intergenic 45.0%
GAGAGGTTAAGATCTTGACG+TGG - chr2_1:66245057-66245076 Msa0218790:intron 45.0%
CAATGTCTTTCTCCCCTTCT+TGG - chr2_1:66245589-66245608 Msa0218790:intron 45.0%
TCGTCTTGCCGTATAACTGT+GGG + chr2_1:66245890-66245909 None:intergenic 45.0%
ATCGTCTTGCCGTATAACTG+TGG + chr2_1:66245891-66245910 None:intergenic 45.0%
CATTCTCAGGCTTCAGATCA+CGG + chr2_1:66246202-66246221 None:intergenic 45.0%
!! GATTATTATCTGGGCTGGTG+TGG + chr2_1:66246294-66246313 None:intergenic 45.0%
!!! TTTTTTGGTGGGGCTACTTG+AGG + chr2_1:66246332-66246351 None:intergenic 45.0%
!!! AGTGTGGGGATTTTTTGGTG+GGG + chr2_1:66246342-66246361 None:intergenic 45.0%
!!! CAGTGTGGGGATTTTTTGGT+GGG + chr2_1:66246343-66246362 None:intergenic 45.0%
!!! TCAGTGTGGGGATTTTTTGG+TGG + chr2_1:66246344-66246363 None:intergenic 45.0%
ACTGCTGGGACTATACAGTT+GGG + chr2_1:66246401-66246420 None:intergenic 45.0%
GTTGGAAACAAGACACTGCT+GGG + chr2_1:66246415-66246434 None:intergenic 45.0%
TTGCTGAGCCCATTGATGTT+AGG - chr2_1:66246486-66246505 Msa0218790:intron 45.0%
TTCAGGAGCTAGGTATTCGT+GGG + chr2_1:66246531-66246550 None:intergenic 45.0%
TTTCAGGAGCTAGGTATTCG+TGG + chr2_1:66246532-66246551 None:intergenic 45.0%
CAGACACTATTTCAGGAGCT+AGG + chr2_1:66246541-66246560 None:intergenic 45.0%
CTAGCTCCTGAAATAGTGTC+TGG - chr2_1:66246539-66246558 Msa0218790:intron 45.0%
TCCTGAAATAGTGTCTGGTG+AGG - chr2_1:66246544-66246563 Msa0218790:intron 45.0%
CCTGAAATAGTGTCTGGTGA+GGG - chr2_1:66246545-66246564 Msa0218790:intron 45.0%
!! TGTCACACCTTTTAGAGGCT+TGG - chr2_1:66246628-66246647 Msa0218790:CDS 45.0%
AAATATCGTGGCTCGAGCTT+TGG - chr2_1:66246670-66246689 Msa0218790:CDS 45.0%
! ATAAGATCTTTTGCCGTGGC+TGG + chr2_1:66246719-66246738 None:intergenic 45.0%
! TTGATCCTAGCCTTCTTGCT+GGG + chr2_1:66246763-66246782 None:intergenic 45.0%
! ATTGATCCTAGCCTTCTTGC+TGG + chr2_1:66246764-66246783 None:intergenic 45.0%
TAAGGAGGTGGAACATAAGG+TGG + chr2_1:66246860-66246879 None:intergenic 45.0%
TTCCTCCTTCTATTGCGATC+CGG + chr2_1:66247145-66247164 None:intergenic 45.0%
!! TATTAAAAAAAAATAAAAAC+CGG - chr2_1:66243843-66243862 Msa0218790:intron 5.0%
!!! AATTTAAATAATCTTTTTTA+AGG + chr2_1:66244745-66244764 None:intergenic 5.0%
!!! AATTAATTTTATATTTTTAG+AGG - chr2_1:66245796-66245815 Msa0218790:intron 5.0%
TTCTCAAAACGGGGAGATGG+AGG + chr2_1:66240104-66240123 None:intergenic 50.0%
AGAGTGAGAGTAAACGGACG+TGG + chr2_1:66240155-66240174 None:intergenic 50.0%
!! GGTTGGGAATGGGTTGAAGA+AGG + chr2_1:66240180-66240199 None:intergenic 50.0%
TTGTTGTGGAGGCGAAGCTT+AGG + chr2_1:66240338-66240357 None:intergenic 50.0%
TCAACCTCTGCTCATCTCTC+CGG - chr2_1:66240411-66240430 Msa0218790:three_prime_UTR 50.0%
!! TGATGTTTGGTGGTGGTTGG+AGG + chr2_1:66240462-66240481 None:intergenic 50.0%
! TTCGGATTGGATCCGGTGAA+TGG + chr2_1:66240514-66240533 None:intergenic 50.0%
! AAGGGGATTCGGATTGGATC+CGG + chr2_1:66240521-66240540 None:intergenic 50.0%
CATCATCGTTGAGTTCAGCG+AGG + chr2_1:66240614-66240633 None:intergenic 50.0%
CTCGCTGAACTCAACGATGA+TGG - chr2_1:66240612-66240631 Msa0218790:CDS 50.0%
GATGTTTGCGGCGAAAGTGA+TGG - chr2_1:66240647-66240666 Msa0218790:CDS 50.0%
GAGCCATTTCGCAGCATCAA+TGG + chr2_1:66240775-66240794 None:intergenic 50.0%
!! TTGACGGAGTTTTGTCCTGG+CGG - chr2_1:66240801-66240820 Msa0218790:CDS 50.0%
GCGGTGATCTTCACGTTCTA+CGG - chr2_1:66240820-66240839 Msa0218790:CDS 50.0%
GGCAACGGCAGCAAAACAAA+CGG - chr2_1:66240841-66240860 Msa0218790:CDS 50.0%
ATGTGCAGAAGATCCTACGG+TGG - chr2_1:66241192-66241211 Msa0218790:CDS 50.0%
TGTCACCTTCACTTGTCTGC+TGG - chr2_1:66241364-66241383 Msa0218790:intron 50.0%
!! GCATTGACTTAGGGCCTGTT+TGG - chr2_1:66241467-66241486 Msa0218790:intron 50.0%
GACTTAGGGCCTGTTTGGTT+TGG - chr2_1:66241472-66241491 Msa0218790:intron 50.0%
GTCATGTATTGTGGGACGGA+GGG + chr2_1:66242768-66242787 None:intergenic 50.0%
TGTCATGTATTGTGGGACGG+AGG + chr2_1:66242769-66242788 None:intergenic 50.0%
ATCATCTATTGCGGGACGGA+GGG - chr2_1:66242996-66243015 Msa0218790:intron 50.0%
TTGACGTGGCTTTCCAGCTT+TGG - chr2_1:66243067-66243086 Msa0218790:intron 50.0%
GTGTGAGATAGCACGTGTGT+TGG - chr2_1:66243119-66243138 Msa0218790:intron 50.0%
!! TAATGAGTGCTGACCTCGGT+AGG + chr2_1:66243235-66243254 None:intergenic 50.0%
GTGAAATGGCGAGCATTCTG+TGG - chr2_1:66243976-66243995 Msa0218790:intron 50.0%
CATTCTGTGGCAATCCTGTG+CGG - chr2_1:66243989-66244008 Msa0218790:intron 50.0%
!! GGTTTTCCCTGTTGACTGTC+AGG - chr2_1:66244126-66244145 Msa0218790:intron 50.0%
!! ATGATCAATGGGCTGATCCG+GGG + chr2_1:66244947-66244966 None:intergenic 50.0%
TGGCCAACACCAAGCACTTT+AGG + chr2_1:66245847-66245866 None:intergenic 50.0%
!! GGTGTTGGCCAAACAAGCAA+TGG - chr2_1:66245856-66245875 Msa0218790:intron 50.0%
GGCCTACCGAATGAATCATG+AGG + chr2_1:66245931-66245950 None:intergenic 50.0%
CACTGCTGGGACTATACAGT+TGG + chr2_1:66246402-66246421 None:intergenic 50.0%
GGTTGGAAACAAGACACTGC+TGG + chr2_1:66246416-66246435 None:intergenic 50.0%
CAAACTCAGGCCCATTGAAC+TGG + chr2_1:66246466-66246485 None:intergenic 50.0%
ATGGGCTCAGCAACAAACTC+AGG + chr2_1:66246479-66246498 None:intergenic 50.0%
GTGGGTCCCAACAAATGACA+TGG + chr2_1:66246513-66246532 None:intergenic 50.0%
CCCTCACCAGACACTATTTC+AGG + chr2_1:66246548-66246567 None:intergenic 50.0%
ATAGTGTCTGGTGAGGGACA+TGG - chr2_1:66246551-66246570 Msa0218790:intron 50.0%
! GACATGGTAGTGCTGTGGAT+TGG - chr2_1:66246567-66246586 Msa0218790:intron 50.0%
!! ATGGTAGTGCTGTGGATTGG+TGG - chr2_1:66246570-66246589 Msa0218790:intron 50.0%
!! CTGTGGATTGGTGGACCTTA+GGG - chr2_1:66246579-66246598 Msa0218790:CDS 50.0%
TGGTTAAGGACCCAGCAAGA+AGG - chr2_1:66246750-66246769 Msa0218790:CDS 50.0%
AGGAGAGCTTGGATTCCACA+TGG - chr2_1:66246951-66246970 Msa0218790:CDS 50.0%
! GTGAATGCGGGTTATCCATG+TGG + chr2_1:66246969-66246988 None:intergenic 50.0%
ACCGTTCGATCAAGCTCAGA+CGG - chr2_1:66247007-66247026 Msa0218790:CDS 50.0%
ACCGTCTGAGCTTGATCGAA+CGG + chr2_1:66247011-66247030 None:intergenic 50.0%
TAGACACAGCGCCAACGCAA+TGG - chr2_1:66240275-66240294 Msa0218790:three_prime_UTR 55.0%
TCCGTTAGATCGTCGAGCCA+CGG + chr2_1:66240303-66240322 None:intergenic 55.0%
GACAGTGGTGGTTGTTGTGG+AGG + chr2_1:66240349-66240368 None:intergenic 55.0%
GGTGACAGTGGTGGTTGTTG+TGG + chr2_1:66240352-66240371 None:intergenic 55.0%
GCTTCGTTTGATGTCAGCGG+TGG + chr2_1:66240373-66240392 None:intergenic 55.0%
GGAGAGATGAGCAGAGGTTG+AGG + chr2_1:66240412-66240431 None:intergenic 55.0%
!! TGTTTGGTGGTGGTTGGAGG+AGG + chr2_1:66240459-66240478 None:intergenic 55.0%
!! GCGTGATGTTTGGTGGTGGT+TGG + chr2_1:66240465-66240484 None:intergenic 55.0%
! AGGAGCGTGATGTTTGGTGG+TGG + chr2_1:66240469-66240488 None:intergenic 55.0%
! GGAAGGAGCGTGATGTTTGG+TGG + chr2_1:66240472-66240491 None:intergenic 55.0%
! GGAGGAAGGAGCGTGATGTT+TGG + chr2_1:66240475-66240494 None:intergenic 55.0%
GGATTGGATCCGGTGAATGG+CGG + chr2_1:66240511-66240530 None:intergenic 55.0%
GACGAGAAGGGGATTCGGAT+TGG + chr2_1:66240527-66240546 None:intergenic 55.0%
GATGCGACGAGAAGGGGATT+CGG + chr2_1:66240532-66240551 None:intergenic 55.0%
GTAGACAGAGCTGATGTCGC+CGG + chr2_1:66240592-66240611 None:intergenic 55.0%
ACTTTCGCCGCAAACATCGC+CGG + chr2_1:66240645-66240664 None:intergenic 55.0%
AGAACGTGAAGATCACCGCC+AGG + chr2_1:66240819-66240838 None:intergenic 55.0%
GGTTCAATGAATCCGCCGTC+AGG - chr2_1:66240862-66240881 Msa0218790:CDS 55.0%
!! TGGAAGTGCTTACCTGACGG+CGG + chr2_1:66240877-66240896 None:intergenic 55.0%
CTCAGACGCTGGTACACTTC+AGG - chr2_1:66240964-66240983 Msa0218790:CDS 55.0%
GATCATCTATTGCGGGACGG+AGG - chr2_1:66242995-66243014 Msa0218790:intron 55.0%
ATCTGCCACAGAATGCCACG+TGG + chr2_1:66244030-66244049 None:intergenic 55.0%
TGAACTGCTGGACGAGAGAG+AGG + chr2_1:66244076-66244095 None:intergenic 55.0%
!! TGATCAATGGGCTGATCCGG+GGG + chr2_1:66244946-66244965 None:intergenic 55.0%
! TGAGGGACATGGTAGTGCTG+TGG - chr2_1:66246562-66246581 Msa0218790:intron 55.0%
!! GCTGTGGATTGGTGGACCTT+AGG - chr2_1:66246578-66246597 Msa0218790:CDS 55.0%
!! CTGGCACGGTGGGTTCTTTT+GGG + chr2_1:66246700-66246719 None:intergenic 55.0%
! ATCTTTTGCCGTGGCTGGCA+CGG + chr2_1:66246714-66246733 None:intergenic 55.0%
AAGGACCCAGCAAGAAGGCT+AGG - chr2_1:66246755-66246774 Msa0218790:CDS 55.0%
ATACGTGGAAACCCGACTGC+AGG - chr2_1:66247115-66247134 Msa0218790:CDS 55.0%
TACGTGGAAACCCGACTGCA+GGG - chr2_1:66247116-66247135 Msa0218790:CDS 55.0%
AGCCGGATCGCAATAGAAGG+AGG - chr2_1:66247140-66247159 Msa0218790:CDS 55.0%
CCGTTAGATCGTCGAGCCAC+GGG + chr2_1:66240302-66240321 None:intergenic 60.0%
CCCGTGGCTCGACGATCTAA+CGG - chr2_1:66240299-66240318 Msa0218790:three_prime_UTR 60.0%
! AGGCGAAGCTTAGGCTCTGG+AGG + chr2_1:66240329-66240348 None:intergenic 60.0%
TGGAGGCGAAGCTTAGGCTC+TGG + chr2_1:66240332-66240351 None:intergenic 60.0%
GATGTCAGCGGTGGTGACAG+TGG + chr2_1:66240364-66240383 None:intergenic 60.0%
TCGACCGGAGAGATGAGCAG+AGG + chr2_1:66240418-66240437 None:intergenic 60.0%
AGGGAAGGGAAGGGATCGAC+CGG + chr2_1:66240433-66240452 None:intergenic 60.0%
AGGAGGAGGAGGGAAGGGAA+GGG + chr2_1:66240442-66240461 None:intergenic 60.0%
GTTGGAGGAGGAGGAGGGAA+GGG + chr2_1:66240447-66240466 None:intergenic 60.0%
TGGTGGTTGGAGGAGGAGGA+GGG + chr2_1:66240452-66240471 None:intergenic 60.0%
!! TTGGTGGTGGTTGGAGGAGG+AGG + chr2_1:66240456-66240475 None:intergenic 60.0%
AGGGGTGGATGCGACGAGAA+GGG + chr2_1:66240539-66240558 None:intergenic 60.0%
CAGCGTCTGAGCTCTCACGA+CGG + chr2_1:66240955-66240974 None:intergenic 60.0%
CTAAGAGGGAGGAGGGGATC+AGG - chr2_1:66241162-66241181 Msa0218790:CDS 60.0%
TGCCACAGAATGCCACGTGG+CGG + chr2_1:66244027-66244046 None:intergenic 60.0%
!! GCTGGCACGGTGGGTTCTTT+TGG + chr2_1:66246701-66246720 None:intergenic 60.0%
ACGTGGAAACCCGACTGCAG+GGG - chr2_1:66247117-66247136 Msa0218790:CDS 60.0%
GGGAGCCGGATCGCAATAGA+AGG - chr2_1:66247137-66247156 Msa0218790:CDS 60.0%
GAGCCACGGGTCCATTGCGT+TGG + chr2_1:66240289-66240308 None:intergenic 65.0%
GTCAGCGGTGGTGACAGTGG+TGG + chr2_1:66240361-66240380 None:intergenic 65.0%
GAGGAGGAGGAGGGAAGGGA+AGG + chr2_1:66240443-66240462 None:intergenic 65.0%
GGTTGGAGGAGGAGGAGGGA+AGG + chr2_1:66240448-66240467 None:intergenic 65.0%
GTGGTGGTTGGAGGAGGAGG+AGG + chr2_1:66240453-66240472 None:intergenic 65.0%
!! AATGGCGGACCAGCGTGGGT+CGG + chr2_1:66240496-66240515 None:intergenic 65.0%
!! GGTGAATGGCGGACCAGCGT+GGG + chr2_1:66240500-66240519 None:intergenic 65.0%
CACGCTGGTCCGCCATTCAC+CGG - chr2_1:66240499-66240518 Msa0218790:exon 65.0%
GGGGTGGATGCGACGAGAAG+GGG + chr2_1:66240538-66240557 None:intergenic 65.0%
GAGGGGTGGATGCGACGAGA+AGG + chr2_1:66240540-66240559 None:intergenic 65.0%
TGATGTCGCCGGAGCCGAGA+CGG + chr2_1:66240581-66240600 None:intergenic 65.0%
CGTCGTGAGAGCTCAGACGC+TGG - chr2_1:66240953-66240972 Msa0218790:CDS 65.0%
AGGGAGGAGGGGATCAGGTG+TGG - chr2_1:66241167-66241186 Msa0218790:CDS 65.0%
GGGAGGAGGGGATCAGGTGT+GGG - chr2_1:66241168-66241187 Msa0218790:CDS 65.0%
GGCGTGCAATTGGACCGCAC+AGG + chr2_1:66244006-66244025 None:intergenic 65.0%
TCCAATTGCACGCCGCCACG+TGG - chr2_1:66244012-66244031 Msa0218790:intron 65.0%
AGAACCCACCGTGCCAGCCA+CGG - chr2_1:66246703-66246722 Msa0218790:CDS 65.0%
TTTGCCGTGGCTGGCACGGT+GGG + chr2_1:66246710-66246729 None:intergenic 65.0%
! TTTTGCCGTGGCTGGCACGG+TGG + chr2_1:66246711-66246730 None:intergenic 65.0%
AAACCCGACTGCAGGGGAGC+CGG - chr2_1:66247123-66247142 Msa0218790:CDS 65.0%
GCGCCAACGCAATGGACCCG+TGG - chr2_1:66240283-66240302 Msa0218790:three_prime_UTR 70.0%
CTCCTTCCTCCGACCCACGC+TGG - chr2_1:66240484-66240503 Msa0218790:three_prime_UTR 70.0%
GACCAGCGTGGGTCGGAGGA+AGG + chr2_1:66240489-66240508 None:intergenic 70.0%
!! CGGTGAATGGCGGACCAGCG+TGG + chr2_1:66240501-66240520 None:intergenic 70.0%
AGAAGCGGAGGTCGGAGGGG+TGG + chr2_1:66240554-66240573 None:intergenic 70.0%
GGGAGAAGCGGAGGTCGGAG+GGG + chr2_1:66240557-66240576 None:intergenic 70.0%
CGGGAGAAGCGGAGGTCGGA+GGG + chr2_1:66240558-66240577 None:intergenic 70.0%
ACGGCGGGAGAAGCGGAGGT+CGG + chr2_1:66240562-66240581 None:intergenic 70.0%
CTCCGCTTCTCCCGCCGTCT+CGG - chr2_1:66240564-66240583 Msa0218790:CDS 70.0%
AGCCGAGACGGCGGGAGAAG+CGG + chr2_1:66240569-66240588 None:intergenic 70.0%
TTCTCCCGCCGTCTCGGCTC+CGG - chr2_1:66240570-66240589 Msa0218790:CDS 70.0%
GCCACGTGGCGGCGTGCAAT+TGG + chr2_1:66244016-66244035 None:intergenic 70.0%
CGCCGCCACGTGGCATTCTG+TGG - chr2_1:66244022-66244041 Msa0218790:intron 70.0%
GATCCGGCTCCCCTGCAGTC+GGG + chr2_1:66247129-66247148 None:intergenic 70.0%
CGATCCGGCTCCCCTGCAGT+CGG + chr2_1:66247130-66247149 None:intergenic 70.0%
GCGGGAGAAGCGGAGGTCGG+AGG + chr2_1:66240559-66240578 None:intergenic 75.0%
CGAGACGGCGGGAGAAGCGG+AGG + chr2_1:66240566-66240585 None:intergenic 75.0%
TGTCGCCGGAGCCGAGACGG+CGG + chr2_1:66240578-66240597 None:intergenic 75.0%
! GGCGGACCAGCGTGGGTCGG+AGG + chr2_1:66240493-66240512 None:intergenic 80.0%
! GTCGCCGGAGCCGAGACGGC+GGG + chr2_1:66240577-66240596 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 66240081 66247377 66240081 ID=Msa0218790;Name=Msa0218790
chr2_1 mRNA 66240081 66247377 66240081 ID=Msa0218790-mRNA-1;Parent=Msa0218790;Name=Msa0218790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=213|1|1|1|1|1|2|434|464
chr2_1 exon 66240081 66241319 66240081 ID=Msa0218790-mRNA-1:exon:18617;Parent=Msa0218790-mRNA-1
chr2_1 exon 66246575 66247377 66246575 ID=Msa0218790-mRNA-1:exon:18616;Parent=Msa0218790-mRNA-1
chr2_1 five_prime_UTR 66247165 66247377 66247165 ID=Msa0218790-mRNA-1:five_prime_utr;Parent=Msa0218790-mRNA-1
chr2_1 CDS 66246575 66247164 66246575 ID=Msa0218790-mRNA-1:cds;Parent=Msa0218790-mRNA-1
chr2_1 CDS 66240515 66241319 66240515 ID=Msa0218790-mRNA-1:cds;Parent=Msa0218790-mRNA-1
chr2_1 three_prime_UTR 66240081 66240514 66240081 ID=Msa0218790-mRNA-1:three_prime_utr;Parent=Msa0218790-mRNA-1
Gene Sequence

>Msa0218790

ATGGACCCGTGGCTCGACGATCTAACGGACGACCTCCAGAGCCTAAGCTTCGCCTCCACAACAACCACCACTGTCACCACCGCTGACATCAAACGAAGCACAAGCTTCAGTTCATCCTCAACCTCTGCTCATCTCTCCGGTCGATCCCTTCCCTTCCCTCCTCCTCCTCCAACCACCACCAAACATCACGCTCCTTCCTCCGACCCACGCTGGTCCGCCATTCACCGGATCCAATCCGAATCCCCTTCTCGTCGCATCCACCCCTCCGACCTCCGCTTCTCCCGCCGTCTCGGCTCCGGCGACATCAGCTCTGTCTACCTCGCTGAACTCAACGATGATGGAAAGATTCCGGCGATGTTTGCGGCGAAAGTGATGGATAAGAAGGAGCTTGTTAGTAGAAGTAAGGAAGGAAGAGCGAAGACGGAGAGAGAAATACTTGAATCTCTTGATCATCCTTTTTTGCCTACTCTTTATGCTACCATTGATGCTGCGAAATGGCTCTGTCTTTTGACGGAGTTTTGTCCTGGCGGTGATCTTCACGTTCTACGGCAACGGCAGCAAAACAAACGGTTCAATGAATCCGCCGTCAGATTCTATGCATCAGAAGTGTTGATGGCACTTGAATACCTTCACATGTTGGGAATAGTATACCGTGATCTGAAGCCTGAGAATGTATTAGTTCGATCAGATGGCCATATAATGCTCACAGACTTTGACCTCTCATTAAAATGTGATGATAGTTCCACACCAGCCCAGATAATAATCTCCAATCAAAACTCTCCTCAAGTAGCCCCACCAAAAAATCCCCACACTGAACACTCACAATTTGCCTCATCTTCATGCATAATACCCAACTGTATAGTCCCAGCAGTGTCTTGTTTCCAACCAAAACGCAAAAGAAAGAAGAAACAAAACCAGTTCAATGGGCCTGAGTTTGTTGCTGAGCCCATTGATGTTAGGTCCATGTCATTTGTTGGGACCCACGAATACCTAGCTCCTGAAATAGTGTCTGGTGAGGGACATGGTAGTGCTGTGGATTGGTGGACCTTAGGGATATTTATATTCGAATTATTTTATGGTGTCACACCTTTTAGAGGCTTGGATAATGAATTAACTCTAGCAAATATCGTGGCTCGAGCTTTGGAGTTCCCAAAAGAACCCACCGTGCCAGCCACGGCAAAAGATCTTATCTCACAGTTATTGGTTAAGGACCCAGCAAGAAGGCTAGGATCAATAATGGGGGCTTCTGCAATCAAACACCACTCATTTTTTCAAGGTGTCAATTGGGCATTGTTAAGGTGTACAAATCCACCTTATGTTCCACCTCCTTATACTAAAGACAAAGAAGACTTATCTGATGATAGTTGTCCACAAACTCCTGTTGATTATTATTGA
Protein sequence

>Msa0218790

MDPWLDDLTDDLQSLSFASTTTTTVTTADIKRSTSFSSSSTSAHLSGRSLPFPPPPPTTTKHHAPSSDPRWSAIHRIQSESPSRRIHPSDLRFSRRLGSGDISSVYLAELNDDGKIPAMFAAKVMDKKELVSRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQQNKRFNESAVRFYASEVLMALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSSTPAQIIISNQNSPQVAPPKNPHTEHSQFASSSCIIPNCIVPAVSCFQPKRKRKKKQNQFNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPARRLGSIMGASAIKHHSFFQGVNWALLRCTNPPYVPPPYTKDKEDLSDDSCPQTPVDYY*