Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219740 | XP_039686690.1 | 94.457 | 433 | 24 | 0 | 1 | 433 | 1 | 433 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219740 | sp|Q9LJ44|COL12_ARATH | 38.283 | 431 | 189 | 13 | 1 | 428 | 1 | 357 | 4.88e-81 | 257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219740 | G7IKL4 | 92.841 | 433 | 23 | 1 | 1 | 433 | 97 | 521 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0219740 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219740 | MtrunA17_Chr2g0322941 | 93.000 | 200 | 14 | 0 | 1 | 200 | 40 | 239 | 1.42e-137 | 394 |
| Msa0219740 | MtrunA17_Chr2g0322951 | 95.238 | 147 | 7 | 0 | 287 | 433 | 1 | 147 | 1.57e-100 | 296 |
| Msa0219740 | MtrunA17_Chr5g0429341 | 34.014 | 441 | 242 | 13 | 1 | 429 | 1 | 404 | 6.19e-58 | 195 |
| Msa0219740 | MtrunA17_Chr3g0120711 | 33.110 | 447 | 239 | 14 | 1 | 429 | 1 | 405 | 1.95e-56 | 191 |
| Msa0219740 | MtrunA17_Chr7g0251781 | 27.753 | 454 | 227 | 19 | 1 | 422 | 1 | 385 | 5.18e-27 | 111 |
| Msa0219740 | MtrunA17_Chr1g0209071 | 44.231 | 104 | 57 | 1 | 1 | 104 | 1 | 103 | 5.50e-22 | 96.7 |
| Msa0219740 | MtrunA17_Chr7g0268691 | 45.000 | 100 | 54 | 1 | 5 | 103 | 20 | 119 | 5.46e-21 | 94.0 |
| Msa0219740 | MtrunA17_Chr3g0136701 | 43.902 | 82 | 46 | 0 | 4 | 85 | 5 | 86 | 1.43e-13 | 70.9 |
| Msa0219740 | MtrunA17_Chr4g0072871 | 37.805 | 82 | 51 | 0 | 4 | 85 | 21 | 102 | 4.95e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219740 | AT3G21880.3 | 38.283 | 431 | 189 | 13 | 1 | 428 | 5 | 361 | 4.56e-82 | 257 |
| Msa0219740 | AT3G21880.2 | 38.283 | 431 | 189 | 13 | 1 | 428 | 5 | 361 | 4.56e-82 | 257 |
| Msa0219740 | AT3G21880.1 | 38.283 | 431 | 189 | 13 | 1 | 428 | 1 | 357 | 4.96e-82 | 257 |
| Msa0219740 | AT4G15250.1 | 35.945 | 434 | 168 | 11 | 1 | 430 | 1 | 328 | 1.81e-67 | 218 |
| Msa0219740 | AT5G48250.1 | 32.215 | 447 | 205 | 13 | 1 | 429 | 1 | 367 | 2.26e-55 | 188 |
| Msa0219740 | AT3G07650.3 | 32.671 | 453 | 194 | 15 | 1 | 429 | 1 | 366 | 1.44e-54 | 186 |
| Msa0219740 | AT3G07650.2 | 32.671 | 453 | 194 | 15 | 1 | 429 | 1 | 366 | 1.44e-54 | 186 |
| Msa0219740 | AT3G07650.4 | 32.671 | 453 | 194 | 15 | 1 | 429 | 1 | 366 | 1.44e-54 | 186 |
| Msa0219740 | AT3G07650.1 | 32.671 | 453 | 194 | 15 | 1 | 429 | 1 | 366 | 1.44e-54 | 186 |
| Msa0219740 | AT1G68190.1 | 44.361 | 133 | 66 | 2 | 1 | 129 | 10 | 138 | 5.06e-26 | 108 |
| Msa0219740 | AT1G68190.3 | 44.361 | 133 | 66 | 2 | 1 | 129 | 10 | 138 | 5.06e-26 | 108 |
| Msa0219740 | AT1G68190.2 | 44.361 | 133 | 66 | 2 | 1 | 129 | 39 | 167 | 8.52e-26 | 108 |
| Msa0219740 | AT2G33500.1 | 44.118 | 102 | 55 | 1 | 5 | 104 | 12 | 113 | 8.48e-23 | 100 |
| Msa0219740 | AT2G33500.1 | 71.111 | 45 | 13 | 0 | 376 | 420 | 355 | 399 | 3.42e-12 | 68.2 |
| Msa0219740 | AT2G33500.2 | 44.118 | 102 | 55 | 1 | 5 | 104 | 12 | 113 | 9.59e-23 | 100 |
| Msa0219740 | AT2G33500.2 | 71.111 | 45 | 13 | 0 | 376 | 420 | 354 | 398 | 3.31e-12 | 68.2 |
| Msa0219740 | AT1G28050.1 | 43.137 | 102 | 56 | 1 | 5 | 104 | 9 | 110 | 6.98e-22 | 97.8 |
| Msa0219740 | AT1G28050.1 | 68.750 | 48 | 15 | 0 | 376 | 423 | 383 | 430 | 3.71e-12 | 68.2 |
| Msa0219740 | AT2G47890.2 | 38.806 | 134 | 82 | 0 | 4 | 137 | 12 | 145 | 1.76e-20 | 90.5 |
| Msa0219740 | AT2G47890.3 | 38.806 | 134 | 82 | 0 | 4 | 137 | 12 | 145 | 2.96e-20 | 91.3 |
| Msa0219740 | AT2G47890.1 | 40.984 | 122 | 72 | 0 | 4 | 125 | 12 | 133 | 3.36e-20 | 91.7 |
| Msa0219740 | AT1G05290.1 | 27.294 | 425 | 222 | 16 | 22 | 432 | 10 | 361 | 1.45e-16 | 81.3 |
| Msa0219740 | AT5G24930.1 | 40.244 | 82 | 49 | 0 | 4 | 85 | 5 | 86 | 6.29e-13 | 70.1 |
| Msa0219740 | AT3G02380.1 | 33.333 | 150 | 72 | 4 | 277 | 419 | 191 | 319 | 2.18e-12 | 68.6 |
| Msa0219740 | AT2G24790.1 | 36.585 | 82 | 52 | 0 | 4 | 85 | 7 | 88 | 9.36e-11 | 63.2 |
Find 120 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCTTGGTATCTCATTT+TGG | 0.141143 | 2_1:-67608385 | None:intergenic |
| TTTGAATTTGATGGAATAAT+AGG | 0.232482 | 2_1:-67606793 | None:intergenic |
| GGAACAAGGTTTGCTATTCT+TGG | 0.259617 | 2_1:-67610379 | None:intergenic |
| CTACACTGGTTGTCCCTCTT+TGG | 0.263095 | 2_1:+67606549 | Msa0219740:CDS |
| ACTAAGGTTCATCACTTCTT+AGG | 0.271186 | 2_1:-67610318 | None:intergenic |
| ATCGCATTGGGAATCAAATT+TGG | 0.271470 | 2_1:+67608332 | Msa0219740:CDS |
| CAAATAAACACAGGCTAATA+AGG | 0.293076 | 2_1:+67610248 | Msa0219740:three_prime_UTR |
| GATCCACCTTGAACTTTAAC+AGG | 0.296430 | 2_1:+67610192 | Msa0219740:three_prime_UTR |
| TGGCAGACTTATCTAAGATT+TGG | 0.313493 | 2_1:+67606569 | Msa0219740:CDS |
| AAAGAATGGCTTCGTTGGTT+TGG | 0.319776 | 2_1:+67606708 | Msa0219740:CDS |
| ATTCAATTACCTAACATAAA+TGG | 0.323167 | 2_1:+67608249 | Msa0219740:CDS |
| CCTCAGAGTCAAACTCATTC+AGG | 0.325054 | 2_1:+67608219 | Msa0219740:CDS |
| CTGCTTTCACCATTTATGTT+AGG | 0.331564 | 2_1:-67608258 | None:intergenic |
| AGGAATAGAATGTCTATTAA+TGG | 0.335494 | 2_1:+67607774 | Msa0219740:CDS |
| ATCTAAGATTTGGCCACATT+TGG | 0.339459 | 2_1:+67606579 | Msa0219740:CDS |
| CTTTCTGTCAAGTTTGTGAT+TGG | 0.356954 | 2_1:+67606476 | Msa0219740:CDS |
| GGTTGACAATGCTAACTAAT+CGG | 0.366937 | 2_1:-67610401 | None:intergenic |
| TTCTTAGGAGTGACAAAATA+AGG | 0.388830 | 2_1:-67610303 | None:intergenic |
| TGTGTGCAGTTTGAATTTGA+TGG | 0.391221 | 2_1:-67606802 | None:intergenic |
| TCTTTAACTAATTAGCTTCA+AGG | 0.399809 | 2_1:+67607601 | Msa0219740:intron |
| TTCTAACCTGTTAAAGTTCA+AGG | 0.405669 | 2_1:-67610198 | None:intergenic |
| AAGCATAGACGAGCGGAATC+AGG | 0.420641 | 2_1:-67606334 | None:intergenic |
| GATACATGTTCTTGACTTGC+TGG | 0.427788 | 2_1:+67610433 | Msa0219740:three_prime_UTR |
| TCAAGGATGCCATGATGTTA+AGG | 0.427984 | 2_1:+67607618 | Msa0219740:CDS |
| AAATTCATCAAATGCTGCTT+GGG | 0.439410 | 2_1:+67606609 | Msa0219740:CDS |
| CCCGAAAAGAATGGCTTCGT+TGG | 0.443487 | 2_1:+67606703 | Msa0219740:CDS |
| TGACCGCCGCAATCAACATT+TGG | 0.447113 | 2_1:+67606672 | Msa0219740:CDS |
| AAATAATTGAGGAAGTATAA+AGG | 0.451706 | 2_1:-67610498 | None:intergenic |
| TCATCCTGGTGAATCGCATT+GGG | 0.451754 | 2_1:+67608320 | Msa0219740:CDS |
| ACAGGCTAATAAGGAAGAAA+AGG | 0.464682 | 2_1:+67610257 | Msa0219740:three_prime_UTR |
| GCAGGATATGAGATTCTGAT+TGG | 0.466120 | 2_1:+67609255 | Msa0219740:three_prime_UTR |
| CGTCTATGCTTGCATTGTGA+TGG | 0.473106 | 2_1:+67606346 | Msa0219740:CDS |
| CAAATTCATCAAATGCTGCT+TGG | 0.474377 | 2_1:+67606608 | Msa0219740:CDS |
| GTAGTGTTTGTGAAGGACTA+AGG | 0.475372 | 2_1:-67610334 | None:intergenic |
| TTAGGCAAAGCACTAGTACT+AGG | 0.478053 | 2_1:-67606637 | None:intergenic |
| AAAGGTAGATTTGTTAAAGC+AGG | 0.483112 | 2_1:+67609163 | Msa0219740:CDS |
| GAGCAGAAACCCGAAAAGAA+TGG | 0.491985 | 2_1:+67606694 | Msa0219740:CDS |
| TCACATTGAGACTGCGGTAG+AGG | 0.492122 | 2_1:+67607828 | Msa0219740:CDS |
| GTTGACAATGCTAACTAATC+GGG | 0.494307 | 2_1:-67610400 | None:intergenic |
| TGATTGCAGATAATGTTTAG+TGG | 0.495705 | 2_1:-67609219 | None:intergenic |
| GTCTATGCTTGCATTGTGAT+GGG | 0.497052 | 2_1:+67606347 | Msa0219740:CDS |
| TTTCCATCATCAGGGGCTGG+TGG | 0.497075 | 2_1:+67608108 | Msa0219740:CDS |
| ACAAAATACAACCACGGAGA+TGG | 0.506317 | 2_1:+67607751 | Msa0219740:CDS |
| TGGATCAACAAATTTGATGC+AGG | 0.507571 | 2_1:+67608128 | Msa0219740:CDS |
| TTCATCCTGGTGAATCGCAT+TGG | 0.508930 | 2_1:+67608319 | Msa0219740:CDS |
| TACTCTTTCTAGCTTGCAGA+GGG | 0.512252 | 2_1:+67610158 | Msa0219740:three_prime_UTR |
| TTATTAGATCCTTAACATCA+TGG | 0.516033 | 2_1:-67607627 | None:intergenic |
| TTGGCTTTATCCCTTGCTTG+AGG | 0.520712 | 2_1:-67608366 | None:intergenic |
| GATTCCCAATGCGATTCACC+AGG | 0.521167 | 2_1:-67608324 | None:intergenic |
| GCAACAGAAGCATGCCTCTA+GGG | 0.521759 | 2_1:+67608193 | Msa0219740:CDS |
| TAACGCACAATCTAGAAGTT+CGG | 0.523526 | 2_1:-67608286 | None:intergenic |
| GATCCACCAGCCCCTGATGA+TGG | 0.526248 | 2_1:-67608111 | None:intergenic |
| GCAGTCAAATATTATTTCGT+CGG | 0.529373 | 2_1:-67607716 | None:intergenic |
| ACGAAATCAAAACCTTCGGT+TGG | 0.530911 | 2_1:-67606867 | None:intergenic |
| CTGCAAATTCTCTGTCTCGC+AGG | 0.534382 | 2_1:+67606380 | Msa0219740:CDS |
| CTTAGATAAGTCTGCCAAAG+AGG | 0.535601 | 2_1:-67606563 | None:intergenic |
| CATGTGTCAAATATGAACCT+TGG | 0.539470 | 2_1:+67606758 | Msa0219740:CDS |
| AACAGTATATGAAATAATTG+AGG | 0.540401 | 2_1:-67610509 | None:intergenic |
| GCGAATGACAAGTTGGGCGA+AGG | 0.540796 | 2_1:+67606730 | Msa0219740:CDS |
| GTTTAGTGGTCGCTCAAAAG+AGG | 0.543739 | 2_1:-67609205 | None:intergenic |
| TGGTTTGGCGAATGACAAGT+TGG | 0.547865 | 2_1:+67606723 | Msa0219740:CDS |
| TCTTGGACAATATCTTGAGA+TGG | 0.556683 | 2_1:-67610362 | None:intergenic |
| CAAGGTTCATATTTGACACA+TGG | 0.558681 | 2_1:-67606757 | None:intergenic |
| CTAATAATTCATGAGGGGAC+CGG | 0.558681 | 2_1:+67607643 | Msa0219740:CDS |
| ATTGAAACCTTCACATAGAC+CGG | 0.558946 | 2_1:-67607662 | None:intergenic |
| GGTTTGGCGAATGACAAGTT+GGG | 0.560416 | 2_1:+67606724 | Msa0219740:CDS |
| GCATTGGGAATCAAATTTGG+AGG | 0.563030 | 2_1:+67608335 | Msa0219740:CDS |
| TGCAACAGAAGCATGCCTCT+AGG | 0.563513 | 2_1:+67608192 | Msa0219740:CDS |
| TTACCTCCAGTGTTTCATCC+TGG | 0.565788 | 2_1:+67608306 | Msa0219740:CDS |
| GATACAAGAAAACGCGTGAA+AGG | 0.568988 | 2_1:+67609145 | Msa0219740:CDS |
| AGGGTGCTTGTCCTCAAGCA+AGG | 0.569387 | 2_1:+67608355 | Msa0219740:CDS |
| CTTATCGCAGAGGAGCGAGC+GGG | 0.569512 | 2_1:-67606407 | None:intergenic |
| AAGATGCATACAGTTGCTGC+AGG | 0.570271 | 2_1:-67610469 | None:intergenic |
| GCAAGCTAGAAAGAGTATGT+AGG | 0.571279 | 2_1:-67610152 | None:intergenic |
| ATAAGGAAGAAAAGGAGAGC+TGG | 0.571489 | 2_1:+67610265 | Msa0219740:three_prime_UTR |
| GATATGCGTCTCGCAAAGCA+AGG | 0.574066 | 2_1:+67609119 | Msa0219740:CDS |
| CATTGGGAATCAAATTTGGA+GGG | 0.578438 | 2_1:+67608336 | Msa0219740:CDS |
| TCAAGATTCAAACCAACCGA+AGG | 0.583028 | 2_1:+67606855 | Msa0219740:CDS |
| GTGCTACTCACTTTCTACAC+TGG | 0.583152 | 2_1:+67606535 | Msa0219740:CDS |
| TTAGATAAGTCTGCCAAAGA+GGG | 0.584761 | 2_1:-67606562 | None:intergenic |
| AGCTTGCAGAGGGGAGTCGA+TGG | 0.588168 | 2_1:+67610168 | Msa0219740:three_prime_UTR |
| TCTGCTCCAAATGTTGATTG+CGG | 0.591802 | 2_1:-67606678 | None:intergenic |
| TTGTGGGGTTGCAAGAGCTG+TGG | 0.597112 | 2_1:+67606300 | Msa0219740:CDS |
| GCTCCAAATGTTGATTGCGG+CGG | 0.597124 | 2_1:-67606675 | None:intergenic |
| TCAGAATCTCATATCCTGCA+AGG | 0.600555 | 2_1:-67609251 | None:intergenic |
| ATGCATACAGTTGCTGCAGG+TGG | 0.602236 | 2_1:-67610466 | None:intergenic |
| GGCATGCTTCTGTTGCAACT+AGG | 0.602723 | 2_1:-67608186 | None:intergenic |
| ATGCTAACTAATCGGGAACA+AGG | 0.603376 | 2_1:-67610393 | None:intergenic |
| GGATCAACAAATTTGATGCA+GGG | 0.606350 | 2_1:+67608129 | Msa0219740:CDS |
| GGAGAAGGTAGTGTTTGTGA+AGG | 0.606568 | 2_1:-67610341 | None:intergenic |
| AAGGATCTAATAATTCATGA+GGG | 0.607523 | 2_1:+67607637 | Msa0219740:CDS |
| TAAGGATCTAATAATTCATG+AGG | 0.609546 | 2_1:+67607636 | Msa0219740:CDS |
| AAATACAACCACGGAGATGG+AGG | 0.615014 | 2_1:+67607754 | Msa0219740:CDS |
| TTAGTTAGCATTGTCAACCG+TGG | 0.625326 | 2_1:+67610405 | Msa0219740:three_prime_UTR |
| ATACTCTTTCTAGCTTGCAG+AGG | 0.626699 | 2_1:+67610157 | Msa0219740:three_prime_UTR |
| GGGTGCTTGTCCTCAAGCAA+GGG | 0.627728 | 2_1:+67608356 | Msa0219740:CDS |
| CCTGAATGAGTTTGACTCTG+AGG | 0.628593 | 2_1:-67608219 | None:intergenic |
| GAGGGGACCGGTCTATGTGA+AGG | 0.628639 | 2_1:+67607655 | Msa0219740:CDS |
| TTGATGCAGGGCATCAACAA+TGG | 0.635140 | 2_1:+67608141 | Msa0219740:CDS |
| CAGTTGCTGCAGGTGGACAG+TGG | 0.635643 | 2_1:-67610459 | None:intergenic |
| ACAATATCTTGAGATGGAGA+AGG | 0.640418 | 2_1:-67610356 | None:intergenic |
| TTATCGCAGAGGAGCGAGCG+GGG | 0.642930 | 2_1:-67606406 | None:intergenic |
| GAATTTGCATCAACCAAATG+TGG | 0.648426 | 2_1:-67606592 | None:intergenic |
| AGAACATGTATCGCAATCCA+CGG | 0.651370 | 2_1:-67610422 | None:intergenic |
| CGAAATTACACTTATCGCAG+AGG | 0.654750 | 2_1:-67606417 | None:intergenic |
| ATATGCGTCTCGCAAAGCAA+GGG | 0.656822 | 2_1:+67609120 | Msa0219740:CDS |
| ATTCTATTCCTCCATCTCCG+TGG | 0.663894 | 2_1:-67607762 | None:intergenic |
| ACTTATCGCAGAGGAGCGAG+CGG | 0.664690 | 2_1:-67606408 | None:intergenic |
| TAACCTGTTAAAGTTCAAGG+TGG | 0.677068 | 2_1:-67610195 | None:intergenic |
| TGTGTGTCTCAAATAAACAC+AGG | 0.679758 | 2_1:+67610239 | Msa0219740:three_prime_UTR |
| AGGATCTAATAATTCATGAG+GGG | 0.684334 | 2_1:+67607638 | Msa0219740:CDS |
| TAGCAGTCACATTGAGACTG+CGG | 0.699859 | 2_1:+67607822 | Msa0219740:CDS |
| GATTCACCAGGATGAAACAC+TGG | 0.703479 | 2_1:-67608312 | None:intergenic |
| TGACTCTGAGGAAACCCTAG+AGG | 0.704907 | 2_1:-67608207 | None:intergenic |
| TCACCAGGATGAAACACTGG+AGG | 0.717611 | 2_1:-67608309 | None:intergenic |
| ACAATGCAAGCATAGACGAG+CGG | 0.721639 | 2_1:-67606341 | None:intergenic |
| ACTGCCACAAAATACAACCA+CGG | 0.722467 | 2_1:+67607745 | Msa0219740:CDS |
| TCTATGTGAAGGTTTCAATG+TGG | 0.759135 | 2_1:+67607666 | Msa0219740:CDS |
| GAGACAGAGAATTTGCAGAG+TGG | 0.767566 | 2_1:-67606375 | None:intergenic |
| ACTCTTTCTAGCTTGCAGAG+GGG | 0.769066 | 2_1:+67610159 | Msa0219740:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTTTAAGTTTTTTTT+AGG | + | chr2_1:67606927-67606946 | Msa0219740:intron | 10.0% |
| !!! | AATCTTTTTTTATCATTATT+AGG | + | chr2_1:67608053-67608072 | Msa0219740:intron | 10.0% |
| !!! | CTAATCTTTTTTATTTTAGT+TGG | + | chr2_1:67606891-67606910 | Msa0219740:intron | 15.0% |
| !!! | CTTAAATTTAAAACTTATGT+GGG | - | chr2_1:67607088-67607107 | None:intergenic | 15.0% |
| !!! | TCTTAAATTTAAAACTTATG+TGG | - | chr2_1:67607089-67607108 | None:intergenic | 15.0% |
| !!! | TGATATATATTTTGAAATGA+AGG | - | chr2_1:67607155-67607174 | None:intergenic | 15.0% |
| !! | AGTTAAAGAAGAAAAATATT+TGG | - | chr2_1:67607590-67607609 | None:intergenic | 15.0% |
| !!! | CTAAAAAAATGTTTTATAAC+CGG | - | chr2_1:67607857-67607876 | None:intergenic | 15.0% |
| !!! | TGATATTTTGATACAAAATT+TGG | + | chr2_1:67608456-67608475 | Msa0219740:intron | 15.0% |
| !! | AACACAATTTAAATGATTAA+TGG | - | chr2_1:67608667-67608686 | None:intergenic | 15.0% |
| !! | TTATGAATAATCAGAAAAAA+TGG | - | chr2_1:67610543-67610562 | None:intergenic | 15.0% |
| !! | TTTGAATTTGATGGAATAAT+AGG | - | chr2_1:67606796-67606815 | None:intergenic | 20.0% |
| !!! | TGATTAGTTTAGTAGTAATA+TGG | + | chr2_1:67607536-67607555 | Msa0219740:intron | 20.0% |
| !!! | AAAATATTTGGTGTCAATTT+TGG | - | chr2_1:67607578-67607597 | None:intergenic | 20.0% |
| !!! | CGGTTATAAAACATTTTTTT+AGG | + | chr2_1:67607855-67607874 | Msa0219740:intron | 20.0% |
| !! | ATAAAAAAAGATTTAGAGAG+AGG | - | chr2_1:67608046-67608065 | None:intergenic | 20.0% |
| !! | ATTCAATTACCTAACATAAA+TGG | + | chr2_1:67608249-67608268 | Msa0219740:CDS | 20.0% |
| !! | TATTAATTATGTTCAGTGTA+TGG | + | chr2_1:67608527-67608546 | Msa0219740:intron | 20.0% |
| !! | AACTCTATACATATATACTA+TGG | + | chr2_1:67608728-67608747 | Msa0219740:intron | 20.0% |
| !! | ACATATATACTATGGTAAAA+TGG | + | chr2_1:67608736-67608755 | Msa0219740:intron | 20.0% |
| !!! | CTTAAATTTATAAGTTGACT+TGG | + | chr2_1:67609066-67609085 | Msa0219740:intron | 20.0% |
| !!! | CTTATTTTCTGCTAATATTT+GGG | - | chr2_1:67609565-67609584 | None:intergenic | 20.0% |
| !!! | TCTTATTTTCTGCTAATATT+TGG | - | chr2_1:67609566-67609585 | None:intergenic | 20.0% |
| !! | AGAAAATAAGACATATTTGA+TGG | + | chr2_1:67609575-67609594 | Msa0219740:intron | 20.0% |
| !!! | TTCTTTCAGTTAATTTTGTA+TGG | - | chr2_1:67609682-67609701 | None:intergenic | 20.0% |
| !! | TACAAAATTAACTGAAAGAA+AGG | + | chr2_1:67609682-67609701 | Msa0219740:intron | 20.0% |
| !! | ACAAAATTAACTGAAAGAAA+GGG | + | chr2_1:67609683-67609702 | Msa0219740:intron | 20.0% |
| !! | AAAATTAAACAAATCAAACG+CGG | + | chr2_1:67609747-67609766 | Msa0219740:intron | 20.0% |
| !! | TATCATTTCAGAACAAAATA+TGG | + | chr2_1:67609851-67609870 | Msa0219740:intron | 20.0% |
| !!! | AAATAATTGAGGAAGTATAA+AGG | - | chr2_1:67610501-67610520 | None:intergenic | 20.0% |
| !! | AACAGTATATGAAATAATTG+AGG | - | chr2_1:67610512-67610531 | None:intergenic | 20.0% |
| !! | TACAAATGACTGTTTTGTAT+TGG | + | chr2_1:67606501-67606520 | Msa0219740:CDS | 25.0% |
| !! | ACAAATGACTGTTTTGTATT+GGG | + | chr2_1:67606502-67606521 | Msa0219740:CDS | 25.0% |
| ! | ACTAATTATATGCCAATCAT+TGG | - | chr2_1:67607119-67607138 | None:intergenic | 25.0% |
| !! | TCTTTAACTAATTAGCTTCA+AGG | + | chr2_1:67607601-67607620 | Msa0219740:intron | 25.0% |
| ! | TTATTAGATCCTTAACATCA+TGG | - | chr2_1:67607630-67607649 | None:intergenic | 25.0% |
| ! | TAAGGATCTAATAATTCATG+AGG | + | chr2_1:67607636-67607655 | Msa0219740:CDS | 25.0% |
| ! | AAGGATCTAATAATTCATGA+GGG | + | chr2_1:67607637-67607656 | Msa0219740:CDS | 25.0% |
| ! | AGGAATAGAATGTCTATTAA+TGG | + | chr2_1:67607774-67607793 | Msa0219740:CDS | 25.0% |
| ! | AACAAATTTCGACAACAATT+TGG | + | chr2_1:67608480-67608499 | Msa0219740:intron | 25.0% |
| ! | TGAAAATCTGAAAATCATCA+TGG | - | chr2_1:67608630-67608649 | None:intergenic | 25.0% |
| ! | TATACTATGGTAAAATGGAA+CGG | + | chr2_1:67608741-67608760 | Msa0219740:intron | 25.0% |
| ! | TACACAGTTATATATAATGC+AGG | - | chr2_1:67608907-67608926 | None:intergenic | 25.0% |
| ! | CAGAACAATGTATTCAAAAA+GGG | - | chr2_1:67609295-67609314 | None:intergenic | 25.0% |
| ! | ACAGAACAATGTATTCAAAA+AGG | - | chr2_1:67609296-67609315 | None:intergenic | 25.0% |
| ! | TTATTCAAAACTTGACTACT+TGG | + | chr2_1:67609389-67609408 | Msa0219740:intron | 25.0% |
| ! | TATTCAAAACTTGACTACTT+GGG | + | chr2_1:67609390-67609409 | Msa0219740:intron | 25.0% |
| ! | TGAAAACCAAGATATAGAAA+AGG | + | chr2_1:67609467-67609486 | Msa0219740:intron | 25.0% |
| !! | TATAGAAAAGGTTTTGCATT+TGG | + | chr2_1:67609479-67609498 | Msa0219740:intron | 25.0% |
| !!! | ATGGAAACTTGTTTTATTGA+AGG | - | chr2_1:67609663-67609682 | None:intergenic | 25.0% |
| ! | TAACAAACTACGCATAAATT+AGG | - | chr2_1:67609785-67609804 | None:intergenic | 25.0% |
| ! | ATTTCAGAACAAAATATGGA+GGG | + | chr2_1:67609855-67609874 | Msa0219740:intron | 25.0% |
| ! | AGATGATCTGATATATAAAG+TGG | - | chr2_1:67609892-67609911 | None:intergenic | 25.0% |
| ! | AATGTCAATAAGTATAGCTA+TGG | - | chr2_1:67609968-67609987 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTAGCATCACT+TGG | - | chr2_1:67609996-67610015 | None:intergenic | 25.0% |
| ! | GTTAGAAAAGAAGAATCAAA+TGG | - | chr2_1:67610042-67610061 | None:intergenic | 25.0% |
| !! | AATATAGTGGAAATTCAGAA+TGG | - | chr2_1:67610123-67610142 | None:intergenic | 25.0% |
| ! | AAATTCATCAAATGCTGCTT+GGG | + | chr2_1:67606609-67606628 | Msa0219740:CDS | 30.0% |
| ! | ATAGGAGAATTTTCAATCCA+AGG | - | chr2_1:67606778-67606797 | None:intergenic | 30.0% |
| TAGAACGAAATCAAAACCTT+CGG | - | chr2_1:67606874-67606893 | None:intergenic | 30.0% | |
| TGAATATGTTTGCAAGTACA+TGG | - | chr2_1:67607180-67607199 | None:intergenic | 30.0% | |
| GAATTGGAGATCAATTAAAG+GGG | - | chr2_1:67607347-67607366 | None:intergenic | 30.0% | |
| CGAATTGGAGATCAATTAAA+GGG | - | chr2_1:67607348-67607367 | None:intergenic | 30.0% | |
| TCGAATTGGAGATCAATTAA+AGG | - | chr2_1:67607349-67607368 | None:intergenic | 30.0% | |
| TAGAGACTAATTCTTCGAAT+TGG | - | chr2_1:67607363-67607382 | None:intergenic | 30.0% | |
| AGGATCTAATAATTCATGAG+GGG | + | chr2_1:67607638-67607657 | Msa0219740:CDS | 30.0% | |
| GCAGTCAAATATTATTTCGT+CGG | - | chr2_1:67607719-67607738 | None:intergenic | 30.0% | |
| ! | TGTATGATTTTTCCATCATC+AGG | + | chr2_1:67608099-67608118 | Msa0219740:CDS | 30.0% |
| ! | GTATGATTTTTCCATCATCA+GGG | + | chr2_1:67608100-67608119 | Msa0219740:CDS | 30.0% |
| ! | TATGATTTTTCCATCATCAG+GGG | + | chr2_1:67608101-67608120 | Msa0219740:CDS | 30.0% |
| ! | TTTCTCTTGGTATCTCATTT+TGG | - | chr2_1:67608388-67608407 | None:intergenic | 30.0% |
| !! | TTCGAGTTTTCTTTTTCTCT+TGG | - | chr2_1:67608401-67608420 | None:intergenic | 30.0% |
| AATTTCGACAACAATTTGGA+TGG | + | chr2_1:67608484-67608503 | Msa0219740:intron | 30.0% | |
| GGCTAATTATGTTTAGTAGA+TGG | - | chr2_1:67608587-67608606 | None:intergenic | 30.0% | |
| ! | TTAGAGTGCTAACACTTATT+TGG | + | chr2_1:67608979-67608998 | Msa0219740:intron | 30.0% |
| !! | AAAGGTAGATTTGTTAAAGC+AGG | + | chr2_1:67609163-67609182 | Msa0219740:CDS | 30.0% |
| TGATTGCAGATAATGTTTAG+TGG | - | chr2_1:67609222-67609241 | None:intergenic | 30.0% | |
| ! | AATCACAAAATTTTCCTTGC+AGG | + | chr2_1:67609237-67609256 | Msa0219740:three_prime_UTR | 30.0% |
| ! | GACATGTTAAAGCATTCAAT+AGG | + | chr2_1:67609424-67609443 | Msa0219740:intron | 30.0% |
| ! | GCAAAACCTTTTCTATATCT+TGG | - | chr2_1:67609476-67609495 | None:intergenic | 30.0% |
| ! | AAGAATAATAGCACTGAGTA+AGG | - | chr2_1:67609634-67609653 | None:intergenic | 30.0% |
| ATTAACTGAAAGAAAGGGTA+TGG | + | chr2_1:67609688-67609707 | Msa0219740:intron | 30.0% | |
| TACGCATAAATTAGGAATAG+TGG | - | chr2_1:67609777-67609796 | None:intergenic | 30.0% | |
| CATTTCAGAACAAAATATGG+AGG | + | chr2_1:67609854-67609873 | Msa0219740:intron | 30.0% | |
| ATGGCAAACAAATCAGAATT+TGG | - | chr2_1:67610023-67610042 | None:intergenic | 30.0% | |
| TAGGTCTGCAAATAATATAG+TGG | - | chr2_1:67610136-67610155 | None:intergenic | 30.0% | |
| TTCTAACCTGTTAAAGTTCA+AGG | - | chr2_1:67610201-67610220 | None:intergenic | 30.0% | |
| CAAATAAACACAGGCTAATA+AGG | + | chr2_1:67610248-67610267 | Msa0219740:three_prime_UTR | 30.0% | |
| TTCTTAGGAGTGACAAAATA+AGG | - | chr2_1:67610306-67610325 | None:intergenic | 30.0% | |
| !! | AAGCTCTATGTGAGTTTTGT+GGG | + | chr2_1:67606284-67606303 | Msa0219740:CDS | 35.0% |
| CTTTCTGTCAAGTTTGTGAT+TGG | + | chr2_1:67606476-67606495 | Msa0219740:CDS | 35.0% | |
| TTAGATAAGTCTGCCAAAGA+GGG | - | chr2_1:67606565-67606584 | None:intergenic | 35.0% | |
| ! | TGGCAGACTTATCTAAGATT+TGG | + | chr2_1:67606569-67606588 | Msa0219740:CDS | 35.0% |
| ! | ATCTAAGATTTGGCCACATT+TGG | + | chr2_1:67606579-67606598 | Msa0219740:CDS | 35.0% |
| GAATTTGCATCAACCAAATG+TGG | - | chr2_1:67606595-67606614 | None:intergenic | 35.0% | |
| CAAATTCATCAAATGCTGCT+TGG | + | chr2_1:67606608-67606627 | Msa0219740:CDS | 35.0% | |
| CAAGGTTCATATTTGACACA+TGG | - | chr2_1:67606760-67606779 | None:intergenic | 35.0% | |
| CATGTGTCAAATATGAACCT+TGG | + | chr2_1:67606758-67606777 | Msa0219740:CDS | 35.0% | |
| TGTGTGCAGTTTGAATTTGA+TGG | - | chr2_1:67606805-67606824 | None:intergenic | 35.0% | |
| GTCTTGTGAATGGAAAACAT+AGG | - | chr2_1:67607018-67607037 | None:intergenic | 35.0% | |
| TAAGATAGCACACCAATGAT+TGG | + | chr2_1:67607104-67607123 | Msa0219740:intron | 35.0% | |
| !! | AATGAGTGAGAGTATTAGTG+TGG | - | chr2_1:67607214-67607233 | None:intergenic | 35.0% |
| CTCTCACTCATTTACCAATA+TGG | + | chr2_1:67607222-67607241 | Msa0219740:intron | 35.0% | |
| ATTGAAACCTTCACATAGAC+CGG | - | chr2_1:67607665-67607684 | None:intergenic | 35.0% | |
| TCTATGTGAAGGTTTCAATG+TGG | + | chr2_1:67607666-67607685 | Msa0219740:CDS | 35.0% | |
| ! | TCTAAAGTCACGCATATGAT+TGG | - | chr2_1:67607937-67607956 | None:intergenic | 35.0% |
| TGGATCAACAAATTTGATGC+AGG | + | chr2_1:67608128-67608147 | Msa0219740:CDS | 35.0% | |
| GGATCAACAAATTTGATGCA+GGG | + | chr2_1:67608129-67608148 | Msa0219740:CDS | 35.0% | |
| CTGCTTTCACCATTTATGTT+AGG | - | chr2_1:67608261-67608280 | None:intergenic | 35.0% | |
| TAACGCACAATCTAGAAGTT+CGG | - | chr2_1:67608289-67608308 | None:intergenic | 35.0% | |
| ATCGCATTGGGAATCAAATT+TGG | + | chr2_1:67608332-67608351 | Msa0219740:CDS | 35.0% | |
| CATTGGGAATCAAATTTGGA+GGG | + | chr2_1:67608336-67608355 | Msa0219740:CDS | 35.0% | |
| GTTAATGACGTTCAAAGTTG+TGG | - | chr2_1:67608608-67608627 | None:intergenic | 35.0% | |
| !! | TTGACTTGGTACAACAAATC+AGG | + | chr2_1:67609080-67609099 | Msa0219740:intron | 35.0% |
| TTGGTACAACAAATCAGGTT+TGG | + | chr2_1:67609085-67609104 | Msa0219740:intron | 35.0% | |
| AGATTCTGATTGGTAAGCTT+AGG | + | chr2_1:67609265-67609284 | Msa0219740:intron | 35.0% | |
| GTTGCAAAATAAGAGATTGC+CGG | + | chr2_1:67609538-67609557 | Msa0219740:intron | 35.0% | |
| ! | TTTCTGCTAATATTTGGGAC+CGG | - | chr2_1:67609560-67609579 | None:intergenic | 35.0% |
| !! | TGAAAGAAAGGGTATGGTTT+TGG | + | chr2_1:67609694-67609713 | Msa0219740:intron | 35.0% |
| GTCAATAAGTATAGCTATGG+TGG | - | chr2_1:67609965-67609984 | None:intergenic | 35.0% | |
| TAACCTGTTAAAGTTCAAGG+TGG | - | chr2_1:67610198-67610217 | None:intergenic | 35.0% | |
| TGTGTGTCTCAAATAAACAC+AGG | + | chr2_1:67610239-67610258 | Msa0219740:three_prime_UTR | 35.0% | |
| ACAGGCTAATAAGGAAGAAA+AGG | + | chr2_1:67610257-67610276 | Msa0219740:three_prime_UTR | 35.0% | |
| ACTAAGGTTCATCACTTCTT+AGG | - | chr2_1:67610321-67610340 | None:intergenic | 35.0% | |
| ACAATATCTTGAGATGGAGA+AGG | - | chr2_1:67610359-67610378 | None:intergenic | 35.0% | |
| TCTTGGACAATATCTTGAGA+TGG | - | chr2_1:67610365-67610384 | None:intergenic | 35.0% | |
| GTTGACAATGCTAACTAATC+GGG | - | chr2_1:67610403-67610422 | None:intergenic | 35.0% | |
| GGTTGACAATGCTAACTAAT+CGG | - | chr2_1:67610404-67610423 | None:intergenic | 35.0% | |
| ! | GAAGCTCTATGTGAGTTTTG+TGG | + | chr2_1:67606283-67606302 | Msa0219740:CDS | 40.0% |
| !! | AGCTCTATGTGAGTTTTGTG+GGG | + | chr2_1:67606285-67606304 | Msa0219740:CDS | 40.0% |
| GTCTATGCTTGCATTGTGAT+GGG | + | chr2_1:67606347-67606366 | Msa0219740:CDS | 40.0% | |
| CGAAATTACACTTATCGCAG+AGG | - | chr2_1:67606420-67606439 | None:intergenic | 40.0% | |
| CTTAGATAAGTCTGCCAAAG+AGG | - | chr2_1:67606566-67606585 | None:intergenic | 40.0% | |
| ! | TTAGGCAAAGCACTAGTACT+AGG | - | chr2_1:67606640-67606659 | None:intergenic | 40.0% |
| !!! | CGGTCACTGATTTCAGTTTT+AGG | - | chr2_1:67606658-67606677 | None:intergenic | 40.0% |
| ! | TCTGCTCCAAATGTTGATTG+CGG | - | chr2_1:67606681-67606700 | None:intergenic | 40.0% |
| ! | ACCAACGAAGCCATTCTTTT+CGG | - | chr2_1:67606707-67606726 | None:intergenic | 40.0% |
| ! | AAAGAATGGCTTCGTTGGTT+TGG | + | chr2_1:67606708-67606727 | Msa0219740:CDS | 40.0% |
| TCAAGATTCAAACCAACCGA+AGG | + | chr2_1:67606855-67606874 | Msa0219740:CDS | 40.0% | |
| ACGAAATCAAAACCTTCGGT+TGG | - | chr2_1:67606870-67606889 | None:intergenic | 40.0% | |
| AATGGAAAACATAGGCACAC+TGG | - | chr2_1:67607010-67607029 | None:intergenic | 40.0% | |
| ! | TCATGTTCGAGTCTTGTGAA+TGG | - | chr2_1:67607028-67607047 | None:intergenic | 40.0% |
| AAAACTTATGTGGGTCGAAG+AGG | - | chr2_1:67607079-67607098 | None:intergenic | 40.0% | |
| CCAACTTTGTCACACCATAT+TGG | - | chr2_1:67607239-67607258 | None:intergenic | 40.0% | |
| CCAATATGGTGTGACAAAGT+TGG | + | chr2_1:67607236-67607255 | Msa0219740:intron | 40.0% | |
| AACTGAGTTCCTTAAGCATG+CGG | + | chr2_1:67607264-67607283 | Msa0219740:intron | 40.0% | |
| AATTCATGACCGCATGCTTA+AGG | - | chr2_1:67607276-67607295 | None:intergenic | 40.0% | |
| TCAAGGATGCCATGATGTTA+AGG | + | chr2_1:67607618-67607637 | Msa0219740:CDS | 40.0% | |
| CTAATAATTCATGAGGGGAC+CGG | + | chr2_1:67607643-67607662 | Msa0219740:CDS | 40.0% | |
| ACTGCCACAAAATACAACCA+CGG | + | chr2_1:67607745-67607764 | Msa0219740:CDS | 40.0% | |
| ! | ATCTCCGTGGTTGTATTTTG+TGG | - | chr2_1:67607752-67607771 | None:intergenic | 40.0% |
| ACAAAATACAACCACGGAGA+TGG | + | chr2_1:67607751-67607770 | Msa0219740:CDS | 40.0% | |
| ! | TGACTGCTACATTTTGTGAC+TGG | - | chr2_1:67607811-67607830 | None:intergenic | 40.0% |
| GCATTGGGAATCAAATTTGG+AGG | + | chr2_1:67608335-67608354 | Msa0219740:CDS | 40.0% | |
| !! | CCATGAATGTCGACTTAAAC+AGG | - | chr2_1:67608814-67608833 | None:intergenic | 40.0% |
| CCTGTTTAAGTCGACATTCA+TGG | + | chr2_1:67608811-67608830 | Msa0219740:intron | 40.0% | |
| GATACAAGAAAACGCGTGAA+AGG | + | chr2_1:67609145-67609164 | Msa0219740:CDS | 40.0% | |
| TCAGAATCTCATATCCTGCA+AGG | - | chr2_1:67609254-67609273 | None:intergenic | 40.0% | |
| GCAGGATATGAGATTCTGAT+TGG | + | chr2_1:67609255-67609274 | Msa0219740:three_prime_UTR | 40.0% | |
| TCAAAACTTGACTACTTGGG+TGG | + | chr2_1:67609393-67609412 | Msa0219740:intron | 40.0% | |
| !!! | GAAAGGGTATGGTTTTGGAT+AGG | + | chr2_1:67609699-67609718 | Msa0219740:intron | 40.0% |
| ! | GCAAGCTAGAAAGAGTATGT+AGG | - | chr2_1:67610155-67610174 | None:intergenic | 40.0% |
| !! | ATACTCTTTCTAGCTTGCAG+AGG | + | chr2_1:67610157-67610176 | Msa0219740:three_prime_UTR | 40.0% |
| !! | TACTCTTTCTAGCTTGCAGA+GGG | + | chr2_1:67610158-67610177 | Msa0219740:three_prime_UTR | 40.0% |
| GATCCACCTTGAACTTTAAC+AGG | + | chr2_1:67610192-67610211 | Msa0219740:three_prime_UTR | 40.0% | |
| ATAAGGAAGAAAAGGAGAGC+TGG | + | chr2_1:67610265-67610284 | Msa0219740:three_prime_UTR | 40.0% | |
| GTAGTGTTTGTGAAGGACTA+AGG | - | chr2_1:67610337-67610356 | None:intergenic | 40.0% | |
| !! | GGAACAAGGTTTGCTATTCT+TGG | - | chr2_1:67610382-67610401 | None:intergenic | 40.0% |
| ATGCTAACTAATCGGGAACA+AGG | - | chr2_1:67610396-67610415 | None:intergenic | 40.0% | |
| TTAGTTAGCATTGTCAACCG+TGG | + | chr2_1:67610405-67610424 | Msa0219740:three_prime_UTR | 40.0% | |
| AGAACATGTATCGCAATCCA+CGG | - | chr2_1:67610425-67610444 | None:intergenic | 40.0% | |
| !! | GATACATGTTCTTGACTTGC+TGG | + | chr2_1:67610433-67610452 | Msa0219740:three_prime_UTR | 40.0% |
| ACAATGCAAGCATAGACGAG+CGG | - | chr2_1:67606344-67606363 | None:intergenic | 45.0% | |
| CGTCTATGCTTGCATTGTGA+TGG | + | chr2_1:67606346-67606365 | Msa0219740:CDS | 45.0% | |
| GAGACAGAGAATTTGCAGAG+TGG | - | chr2_1:67606378-67606397 | None:intergenic | 45.0% | |
| ! | GTGCTACTCACTTTCTACAC+TGG | + | chr2_1:67606535-67606554 | Msa0219740:CDS | 45.0% |
| GAGCAGAAACCCGAAAAGAA+TGG | + | chr2_1:67606694-67606713 | Msa0219740:CDS | 45.0% | |
| ! | CCAACGAAGCCATTCTTTTC+GGG | - | chr2_1:67606706-67606725 | None:intergenic | 45.0% |
| ! | TGGTTTGGCGAATGACAAGT+TGG | + | chr2_1:67606723-67606742 | Msa0219740:CDS | 45.0% |
| GGTTTGGCGAATGACAAGTT+GGG | + | chr2_1:67606724-67606743 | Msa0219740:CDS | 45.0% | |
| AGGTGCTCTTCCATACACAT+CGG | - | chr2_1:67607309-67607328 | None:intergenic | 45.0% | |
| AAATACAACCACGGAGATGG+AGG | + | chr2_1:67607754-67607773 | Msa0219740:CDS | 45.0% | |
| ATTCTATTCCTCCATCTCCG+TGG | - | chr2_1:67607765-67607784 | None:intergenic | 45.0% | |
| TAGCAGTCACATTGAGACTG+CGG | + | chr2_1:67607822-67607841 | Msa0219740:CDS | 45.0% | |
| ! | ATTTTTCCATCATCAGGGGC+TGG | + | chr2_1:67608105-67608124 | Msa0219740:CDS | 45.0% |
| ! | TTGATGCAGGGCATCAACAA+TGG | + | chr2_1:67608141-67608160 | Msa0219740:CDS | 45.0% |
| CCTGAATGAGTTTGACTCTG+AGG | - | chr2_1:67608222-67608241 | None:intergenic | 45.0% | |
| CCTCAGAGTCAAACTCATTC+AGG | + | chr2_1:67608219-67608238 | Msa0219740:CDS | 45.0% | |
| TTACCTCCAGTGTTTCATCC+TGG | + | chr2_1:67608306-67608325 | Msa0219740:CDS | 45.0% | |
| GATTCACCAGGATGAAACAC+TGG | - | chr2_1:67608315-67608334 | None:intergenic | 45.0% | |
| TTCATCCTGGTGAATCGCAT+TGG | + | chr2_1:67608319-67608338 | Msa0219740:CDS | 45.0% | |
| TCATCCTGGTGAATCGCATT+GGG | + | chr2_1:67608320-67608339 | Msa0219740:CDS | 45.0% | |
| !! | TTGGCTTTATCCCTTGCTTG+AGG | - | chr2_1:67608369-67608388 | None:intergenic | 45.0% |
| CGACATTCATGGACAATCAC+AGG | + | chr2_1:67608822-67608841 | Msa0219740:intron | 45.0% | |
| ATATGCGTCTCGCAAAGCAA+GGG | + | chr2_1:67609120-67609139 | Msa0219740:CDS | 45.0% | |
| GTTTAGTGGTCGCTCAAAAG+AGG | - | chr2_1:67609208-67609227 | None:intergenic | 45.0% | |
| AACTTGACTACTTGGGTGGT+TGG | + | chr2_1:67609397-67609416 | Msa0219740:intron | 45.0% | |
| !! | ACTCTTTCTAGCTTGCAGAG+GGG | + | chr2_1:67610159-67610178 | Msa0219740:three_prime_UTR | 45.0% |
| GGAGAAGGTAGTGTTTGTGA+AGG | - | chr2_1:67610344-67610363 | None:intergenic | 45.0% | |
| AAGATGCATACAGTTGCTGC+AGG | - | chr2_1:67610472-67610491 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTTTTATTAAGAAA+TGG | - | chr2_1:67609322-67609341 | None:intergenic | 5.0% |
| AAGCATAGACGAGCGGAATC+AGG | - | chr2_1:67606337-67606356 | None:intergenic | 50.0% | |
| CTGCAAATTCTCTGTCTCGC+AGG | + | chr2_1:67606380-67606399 | Msa0219740:CDS | 50.0% | |
| ! | CTACACTGGTTGTCCCTCTT+TGG | + | chr2_1:67606549-67606568 | Msa0219740:CDS | 50.0% |
| TGACCGCCGCAATCAACATT+TGG | + | chr2_1:67606672-67606691 | Msa0219740:CDS | 50.0% | |
| ! | GCTCCAAATGTTGATTGCGG+CGG | - | chr2_1:67606678-67606697 | None:intergenic | 50.0% |
| CCCGAAAAGAATGGCTTCGT+TGG | + | chr2_1:67606703-67606722 | Msa0219740:CDS | 50.0% | |
| CGATTCCTGACCGATGTGTA+TGG | + | chr2_1:67607296-67607315 | Msa0219740:intron | 50.0% | |
| CTCTTCCATACACATCGGTC+AGG | - | chr2_1:67607304-67607323 | None:intergenic | 50.0% | |
| TCACATTGAGACTGCGGTAG+AGG | + | chr2_1:67607828-67607847 | Msa0219740:CDS | 50.0% | |
| GGCATGCTTCTGTTGCAACT+AGG | - | chr2_1:67608189-67608208 | None:intergenic | 50.0% | |
| ! | TGCAACAGAAGCATGCCTCT+AGG | + | chr2_1:67608192-67608211 | Msa0219740:CDS | 50.0% |
| ! | GCAACAGAAGCATGCCTCTA+GGG | + | chr2_1:67608193-67608212 | Msa0219740:CDS | 50.0% |
| ! | TGACTCTGAGGAAACCCTAG+AGG | - | chr2_1:67608210-67608229 | None:intergenic | 50.0% |
| TCACCAGGATGAAACACTGG+AGG | - | chr2_1:67608312-67608331 | None:intergenic | 50.0% | |
| GATTCCCAATGCGATTCACC+AGG | - | chr2_1:67608327-67608346 | None:intergenic | 50.0% | |
| GATATGCGTCTCGCAAAGCA+AGG | + | chr2_1:67609119-67609138 | Msa0219740:CDS | 50.0% | |
| ATGCATACAGTTGCTGCAGG+TGG | - | chr2_1:67610469-67610488 | None:intergenic | 50.0% | |
| TTGTGGGGTTGCAAGAGCTG+TGG | + | chr2_1:67606300-67606319 | Msa0219740:CDS | 55.0% | |
| ACTTATCGCAGAGGAGCGAG+CGG | - | chr2_1:67606411-67606430 | None:intergenic | 55.0% | |
| ! | GCGAATGACAAGTTGGGCGA+AGG | + | chr2_1:67606730-67606749 | Msa0219740:CDS | 55.0% |
| ACCCTCGTTACTATCCGAGC+TGG | + | chr2_1:67606955-67606974 | Msa0219740:intron | 55.0% | |
| CCCAGCTCGGATAGTAACGA+GGG | - | chr2_1:67606959-67606978 | None:intergenic | 55.0% | |
| CCCTCGTTACTATCCGAGCT+GGG | + | chr2_1:67606956-67606975 | Msa0219740:intron | 55.0% | |
| ACCCAGCTCGGATAGTAACG+AGG | - | chr2_1:67606960-67606979 | None:intergenic | 55.0% | |
| TCGTTACTATCCGAGCTGGG+TGG | + | chr2_1:67606959-67606978 | Msa0219740:intron | 55.0% | |
| TTATGTGCGTCCACCCAGCT+CGG | - | chr2_1:67606972-67606991 | None:intergenic | 55.0% | |
| GGTCGAAGAGGCAATGAGCA+TGG | - | chr2_1:67607067-67607086 | None:intergenic | 55.0% | |
| !! | GGAAGAGCACCTGTTGTGAG+AGG | + | chr2_1:67607317-67607336 | Msa0219740:intron | 55.0% |
| GAGACTGCGGTAGAGGTTAC+CGG | + | chr2_1:67607835-67607854 | Msa0219740:intron | 55.0% | |
| TTTCCATCATCAGGGGCTGG+TGG | + | chr2_1:67608108-67608127 | Msa0219740:CDS | 55.0% | |
| ! | AGGGTGCTTGTCCTCAAGCA+AGG | + | chr2_1:67608355-67608374 | Msa0219740:CDS | 55.0% |
| GGGTGCTTGTCCTCAAGCAA+GGG | + | chr2_1:67608356-67608375 | Msa0219740:CDS | 55.0% | |
| TTATCGCAGAGGAGCGAGCG+GGG | - | chr2_1:67606409-67606428 | None:intergenic | 60.0% | |
| CTTATCGCAGAGGAGCGAGC+GGG | - | chr2_1:67606410-67606429 | None:intergenic | 60.0% | |
| GAGCTGGGTGGACGCACATA+AGG | + | chr2_1:67606971-67606990 | Msa0219740:intron | 60.0% | |
| CTGGGTGGACGCACATAAGG+CGG | + | chr2_1:67606974-67606993 | Msa0219740:intron | 60.0% | |
| AGGGGCTGACCTCTCACAAC+AGG | - | chr2_1:67607329-67607348 | None:intergenic | 60.0% | |
| GAGGGGACCGGTCTATGTGA+AGG | + | chr2_1:67607655-67607674 | Msa0219740:CDS | 60.0% | |
| GATCCACCAGCCCCTGATGA+TGG | - | chr2_1:67608114-67608133 | None:intergenic | 60.0% | |
| AGCTTGCAGAGGGGAGTCGA+TGG | + | chr2_1:67610168-67610187 | Msa0219740:three_prime_UTR | 60.0% | |
| CAGTTGCTGCAGGTGGACAG+TGG | - | chr2_1:67610462-67610481 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 67606280 | 67610572 | 67606280 | ID=Msa0219740;Name=Msa0219740 |
| chr2_1 | mRNA | 67606280 | 67610572 | 67606280 | ID=Msa0219740-mRNA-1;Parent=Msa0219740;Name=Msa0219740-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.5|0.6|1|0.75|0.8|5|473|433 |
| chr2_1 | exon | 67606280 | 67606876 | 67606280 | ID=Msa0219740-mRNA-1:exon:19111;Parent=Msa0219740-mRNA-1 |
| chr2_1 | exon | 67607616 | 67607849 | 67607616 | ID=Msa0219740-mRNA-1:exon:19112;Parent=Msa0219740-mRNA-1 |
| chr2_1 | exon | 67608075 | 67608421 | 67608075 | ID=Msa0219740-mRNA-1:exon:19113;Parent=Msa0219740-mRNA-1 |
| chr2_1 | exon | 67609102 | 67609276 | 67609102 | ID=Msa0219740-mRNA-1:exon:19114;Parent=Msa0219740-mRNA-1 |
| chr2_1 | exon | 67610151 | 67610572 | 67610151 | ID=Msa0219740-mRNA-1:exon:19115;Parent=Msa0219740-mRNA-1 |
| chr2_1 | CDS | 67606280 | 67606876 | 67606280 | ID=Msa0219740-mRNA-1:cds;Parent=Msa0219740-mRNA-1 |
| chr2_1 | CDS | 67607616 | 67607849 | 67607616 | ID=Msa0219740-mRNA-1:cds;Parent=Msa0219740-mRNA-1 |
| chr2_1 | CDS | 67608075 | 67608421 | 67608075 | ID=Msa0219740-mRNA-1:cds;Parent=Msa0219740-mRNA-1 |
| chr2_1 | CDS | 67609102 | 67609225 | 67609102 | ID=Msa0219740-mRNA-1:cds;Parent=Msa0219740-mRNA-1 |
| chr2_1 | three_prime_UTR | 67609226 | 67609276 | 67609226 | ID=Msa0219740-mRNA-1:three_prime_utr;Parent=Msa0219740-mRNA-1 |
| chr2_1 | three_prime_UTR | 67610151 | 67610572 | 67610151 | ID=Msa0219740-mRNA-1:three_prime_utr;Parent=Msa0219740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
