AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0219990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0219990 MtrunA17_Chr2g0323331 69.821 391 71 8 31 400 5 369 3.22e-178 500
Msa0219990 MtrunA17_Chr2g0323351 58.580 169 52 6 1 154 58 223 1.27e-51 173
Msa0219990 MtrunA17_Chr2g0323351 55.882 102 31 4 157 254 137 228 4.12e-15 74.7
Msa0219990 MtrunA17_Chr2g0323351 43.038 158 30 7 245 397 146 248 1.80e-13 69.7
Msa0219990 MtrunA17_Chr4g0022901 39.474 190 80 3 1 155 59 248 5.59e-35 130
Msa0219990 MtrunA17_Chr4g0022911 39.860 143 81 1 1 143 59 196 2.34e-27 110
Msa0219990 MtrunA17_Chr4g0022891 38.235 170 77 7 1 152 58 217 2.64e-26 105
Msa0219990 MtrunA17_Chr4g0022931 62.338 77 29 0 1 77 59 135 3.07e-26 106
Msa0219990 MtrunA17_Chr4g0022881 40.252 159 81 5 1 152 58 209 8.32e-26 104
Msa0219990 MtrunA17_Chr1g0187761 41.401 157 72 4 1 152 58 199 2.52e-25 103
Msa0219990 MtrunA17_Chr1g0167691 38.012 171 75 4 1 161 58 207 3.08e-25 103
Msa0219990 MtrunA17_Chr1g0167661 43.137 153 64 5 1 145 58 195 4.98e-25 102
Msa0219990 MtrunA17_Chr7g0261281 46.087 115 57 1 2 111 59 173 6.66e-24 100
Msa0219990 MtrunA17_Chr7g0274581 67.742 62 20 0 1 62 58 119 9.70e-24 97.8
Msa0219990 MtrunA17_Chr1g0211161 67.213 61 20 0 1 61 59 119 1.61e-23 97.8
Msa0219990 MtrunA17_Chr4g0058631 67.213 61 20 0 1 61 58 118 4.55e-23 99.4
Msa0219990 MtrunA17_Chr1g0193371 48.113 106 45 2 1 106 58 153 7.10e-23 99.0
Msa0219990 MtrunA17_Chr5g0435101 65.574 61 21 0 1 61 57 117 1.50e-22 94.7
Msa0219990 MtrunA17_Chr3g0117091 65.574 61 21 0 1 61 58 118 1.54e-22 97.8
Msa0219990 MtrunA17_Chr8g0346561 61.538 65 25 0 1 65 58 122 1.73e-22 96.7
Msa0219990 MtrunA17_Chr4g0044421 65.574 61 21 0 1 61 58 118 2.13e-22 94.0
Msa0219990 MtrunA17_Chr4g0055981 65.517 58 20 0 1 58 101 158 1.45e-21 92.8
Msa0219990 MtrunA17_Chr4g0070641 64.407 59 21 0 1 59 58 116 1.56e-21 90.9
Msa0219990 MtrunA17_Chr1g0152011 37.963 108 65 1 1 108 59 164 1.79e-21 94.7
Msa0219990 MtrunA17_Chr1g0203411 60.606 66 26 0 1 66 58 123 1.89e-21 93.6
Msa0219990 MtrunA17_Chr1g0203441 62.295 61 23 0 1 61 59 119 2.37e-21 92.8
Msa0219990 MtrunA17_Chr4g0070611 45.714 105 45 1 1 93 58 162 2.46e-21 93.6
Msa0219990 MtrunA17_Chr7g0228891 64.407 59 21 0 1 59 58 116 3.25e-21 92.4
Msa0219990 MtrunA17_Chr7g0247131 67.241 58 19 0 2 59 25 82 4.44e-21 92.0
Msa0219990 MtrunA17_Chr4g0057031 63.333 60 22 0 2 61 59 118 5.36e-21 92.0
Msa0219990 MtrunA17_Chr3g0131121 61.017 59 23 0 1 59 58 116 7.02e-21 92.0
Msa0219990 MtrunA17_Chr5g0400821 53.521 71 32 1 1 70 59 129 7.76e-21 92.0
Msa0219990 MtrunA17_Chr8g0349261 67.797 59 19 0 2 60 61 119 9.31e-21 91.7
Msa0219990 MtrunA17_Chr4g0037141 56.667 60 26 0 1 60 58 117 1.04e-20 91.3
Msa0219990 MtrunA17_Chr3g0115821 63.333 60 22 0 2 61 59 118 1.25e-20 92.0
Msa0219990 MtrunA17_Chr1g0193801 62.712 59 22 0 1 59 58 116 1.75e-20 92.4
Msa0219990 MtrunA17_Chr2g0328771 61.538 65 24 1 1 65 66 129 1.85e-20 91.3
Msa0219990 MtrunA17_Chr7g0275911 61.017 59 23 0 1 59 58 116 2.10e-20 90.1
Msa0219990 MtrunA17_Chr7g0270891 62.712 59 22 0 1 59 58 116 2.28e-20 91.7
Msa0219990 MtrunA17_Chr7g0240821 61.017 59 23 0 1 59 47 105 3.76e-20 88.6
Msa0219990 MtrunA17_Chr6g0470971 59.016 61 25 0 1 61 60 120 3.85e-20 89.7
Msa0219990 MtrunA17_Chr7g0217741 66.667 60 20 0 2 61 59 118 4.28e-20 90.1
Msa0219990 MtrunA17_Chr2g0281071 61.667 60 23 0 2 61 60 119 4.72e-20 90.5
Msa0219990 MtrunA17_Chr3g0121241 60.000 60 24 0 1 60 88 147 4.79e-20 89.7
Msa0219990 MtrunA17_Chr4g0068061 58.462 65 27 0 1 65 58 122 5.08e-20 90.5
Msa0219990 MtrunA17_Chr4g0048511 61.667 60 23 0 2 61 60 119 5.34e-20 90.5
Msa0219990 MtrunA17_Chr8g0343831 59.677 62 25 0 1 62 54 115 5.58e-20 88.6
Msa0219990 MtrunA17_Chr4g0042671 65.000 60 21 0 2 61 59 118 5.96e-20 90.9
Msa0219990 MtrunA17_Chr7g0217221 63.934 61 22 0 2 62 59 119 8.08e-20 88.6
Msa0219990 MtrunA17_Chr4g0032401 63.492 63 22 1 1 63 63 124 8.47e-20 89.7
Msa0219990 MtrunA17_Chr5g0410961 60.000 60 24 0 2 61 59 118 9.04e-20 89.7
Msa0219990 MtrunA17_Chr2g0323411 60.000 60 24 0 2 61 59 118 9.91e-20 89.4
Msa0219990 MtrunA17_Chr3g0088461 64.407 59 21 0 1 59 68 126 1.14e-19 89.4
Msa0219990 MtrunA17_Chr6g0453471 65.000 60 21 0 2 61 59 118 1.25e-19 89.4
Msa0219990 MtrunA17_Chr3g0110351 61.667 60 23 0 2 61 59 118 1.45e-19 88.6
Msa0219990 MtrunA17_Chr1g0186061 60.345 58 23 0 1 58 66 123 1.59e-19 87.4
Msa0219990 MtrunA17_Chr3g0103281 62.069 58 22 0 2 59 59 116 1.86e-19 88.6
Msa0219990 MtrunA17_Chr1g0151941 55.556 63 28 0 1 63 59 121 1.98e-19 87.0
Msa0219990 MtrunA17_Chr5g0395281 60.000 60 24 0 2 61 59 118 2.00e-19 88.2
Msa0219990 MtrunA17_Chr5g0434901 60.714 56 22 0 1 56 19 74 2.00e-19 83.6
Msa0219990 MtrunA17_Chr5g0434571 61.667 60 23 0 2 61 95 154 2.04e-19 89.0
Msa0219990 MtrunA17_Chr2g0309911 62.712 59 22 0 2 60 58 116 2.61e-19 87.8
Msa0219990 MtrunA17_Chr4g0039971 61.667 60 23 0 2 61 60 119 2.92e-19 88.2
Msa0219990 MtrunA17_Chr1g0194951 61.017 59 23 0 1 59 58 116 2.93e-19 88.6
Msa0219990 MtrunA17_Chr3g0135311 50.617 81 39 1 1 80 59 139 3.86e-19 87.8
Msa0219990 MtrunA17_Chr1g0209661 33.673 196 91 6 1 175 73 250 5.88e-19 87.0
Msa0219990 MtrunA17_Chr8g0342541 60.000 60 24 0 1 60 58 117 5.99e-19 87.4
Msa0219990 MtrunA17_Chr8g0360111 63.636 55 20 0 1 55 71 125 6.93e-19 85.9
Msa0219990 MtrunA17_Chr8g0342481 60.000 60 24 0 1 60 59 118 7.63e-19 87.8
Msa0219990 MtrunA17_Chr8g0342521 58.333 60 25 0 1 60 58 117 8.27e-19 87.0
Msa0219990 MtrunA17_Chr1g0168661 60.345 58 23 0 1 58 67 124 1.07e-18 85.1
Msa0219990 MtrunA17_Chr8g0385321 55.932 59 26 0 1 59 58 116 1.15e-18 86.3
Msa0219990 MtrunA17_Chr7g0228231 57.895 57 24 0 1 57 60 116 1.24e-18 84.0
Msa0219990 MtrunA17_Chr1g0180391 58.621 58 24 0 1 58 65 122 1.28e-18 84.3
Msa0219990 MtrunA17_Chr3g0092401 63.333 60 22 0 2 61 60 119 1.29e-18 85.9
Msa0219990 MtrunA17_Chr2g0330041 60.000 60 24 0 1 60 58 117 1.86e-18 86.7
Msa0219990 MtrunA17_Chr8g0387421 58.065 62 26 0 1 62 58 119 1.92e-18 85.5
Msa0219990 MtrunA17_Chr5g0434931 56.667 60 26 0 1 60 81 140 2.33e-18 84.7
Msa0219990 MtrunA17_Chr1g0194301 56.897 58 25 0 1 58 79 136 2.44e-18 84.3
Msa0219990 MtrunA17_Chr8g0354661 57.895 57 24 0 2 58 84 140 3.25e-18 86.7
Msa0219990 MtrunA17_Chr7g0228991 58.333 60 25 0 1 60 75 134 7.64e-18 83.2
Msa0219990 MtrunA17_Chr4g0030881 51.562 64 31 0 1 64 60 123 8.33e-18 82.8
Msa0219990 MtrunA17_Chr4g0028311 55.000 60 27 0 1 60 59 118 8.45e-18 83.6
Msa0219990 MtrunA17_Chr5g0417821 57.377 61 26 0 1 61 53 113 1.13e-17 82.8
Msa0219990 MtrunA17_Chr5g0434911 55.000 60 27 0 1 60 67 126 1.18e-17 82.4
Msa0219990 MtrunA17_Chr6g0450101 53.968 63 28 1 1 63 60 121 1.78e-17 80.5
Msa0219990 MtrunA17_Chr4g0060721 57.812 64 27 0 2 65 60 123 1.89e-17 82.8
Msa0219990 MtrunA17_Chr6g0452271 55.000 60 27 0 2 61 59 118 2.69e-17 82.4
Msa0219990 MtrunA17_Chr7g0254411 61.667 60 23 0 2 61 59 118 3.13e-17 82.0
Msa0219990 MtrunA17_Chr2g0311221 66.038 53 18 0 1 53 60 112 3.26e-17 82.0
Msa0219990 MtrunA17_Chr1g0194291 53.846 65 26 1 1 65 67 127 3.47e-17 80.9
Msa0219990 MtrunA17_Chr7g0264641 56.667 60 26 0 1 60 59 118 3.50e-17 80.9
Msa0219990 MtrunA17_Chr6g0487491 51.471 68 25 1 1 60 59 126 3.57e-17 80.9
Msa0219990 MtrunA17_Chr5g0434831 56.667 60 26 0 1 60 53 112 3.61e-17 79.3
Msa0219990 MtrunA17_Chr3g0099131 54.386 57 26 0 2 58 88 144 4.00e-17 83.2
Msa0219990 MtrunA17_Chr3g0080861 56.140 57 25 0 2 58 84 140 6.16e-17 82.4
Msa0219990 MtrunA17_Chr5g0397231 64.706 51 18 0 1 51 58 108 1.02e-16 80.9
Msa0219990 MtrunA17_Chr7g0271241 66.667 51 17 0 1 51 58 108 1.12e-16 80.9
Msa0219990 MtrunA17_Chr7g0220341 55.000 60 27 0 1 60 73 132 1.27e-16 79.3
Msa0219990 MtrunA17_Chr6g0453211 65.385 52 18 0 2 53 59 110 1.30e-16 80.1
Msa0219990 MtrunA17_Chr5g0434841 55.000 60 27 0 1 60 66 125 2.01e-16 79.7
Msa0219990 MtrunA17_Chr2g0327821 50.000 68 31 1 1 68 52 116 2.78e-16 77.8
Msa0219990 MtrunA17_Chr7g0229101 57.143 56 24 0 1 56 18 73 8.89e-16 75.9
Msa0219990 MtrunA17_Chr4g0072751 56.604 53 23 0 1 53 59 111 1.18e-15 77.8
Msa0219990 MtrunA17_Chr1g0154031 51.613 62 30 0 2 63 123 184 1.45e-15 77.8
Msa0219990 MtrunA17_Chr2g0327351 56.604 53 23 0 1 53 59 111 1.46e-15 77.0
Msa0219990 MtrunA17_Chr3g0117511 33.553 152 80 5 2 137 227 373 2.72e-15 77.4
Msa0219990 MtrunA17_Chr7g0229131 33.099 142 74 4 1 122 18 158 3.44e-15 73.2
Msa0219990 MtrunA17_Chr4g0054391 54.902 51 23 0 1 51 59 109 6.18e-15 74.7
Msa0219990 MtrunA17_Chr3g0093811 61.702 47 18 0 13 59 40 86 1.12e-14 73.6
Msa0219990 MtrunA17_Chr2g0323321 80.000 35 7 0 1 35 57 91 1.61e-14 69.3
Msa0219990 MtrunA17_Chr2g0322521 61.404 57 22 0 2 58 76 132 1.68e-14 74.7
Msa0219990 MtrunA17_Chr4g0008551 47.619 63 33 0 2 64 82 144 2.46e-14 73.6
Msa0219990 MtrunA17_Chr6g0454921 50.877 57 28 0 2 58 59 115 4.53e-14 70.9
Msa0219990 MtrunA17_Chr5g0434871 59.091 44 18 0 17 60 2 45 4.85e-14 66.6
Msa0219990 MtrunA17_Chr5g0429661 41.558 77 37 1 2 78 166 234 4.98e-14 72.8
Msa0219990 MtrunA17_Chr2g0293911 46.667 75 39 1 1 75 70 143 6.13e-14 72.4
Msa0219990 MtrunA17_Chr3g0133601 54.386 57 26 0 2 58 81 137 8.51e-14 70.5
Msa0219990 MtrunA17_Chr4g0068921 46.667 75 39 1 1 75 70 143 8.88e-14 69.7
Msa0219990 MtrunA17_Chr7g0233061 41.667 72 41 1 2 73 222 292 1.43e-13 71.6
Msa0219990 MtrunA17_Chr7g0269831 57.627 59 25 0 1 59 58 116 2.95e-13 70.5
Msa0219990 MtrunA17_Chr4g0058991 43.478 69 38 1 2 69 253 321 3.15e-13 70.9
Msa0219990 MtrunA17_Chr8g0334881 55.172 58 25 1 1 57 56 113 3.43e-13 70.1
Msa0219990 MtrunA17_Chr5g0417621 39.726 73 44 0 2 74 178 250 3.46e-13 70.9
Msa0219990 MtrunA17_Chr4g0042501 42.029 69 40 0 2 70 149 217 3.64e-13 70.5
Msa0219990 MtrunA17_Chr1g0192411 44.828 58 32 0 1 58 58 115 4.50e-13 70.5
Msa0219990 MtrunA17_Chr5g0401731 47.368 57 30 0 2 58 59 115 1.12e-12 68.6
Msa0219990 MtrunA17_Chr4g0053431 47.368 57 30 0 2 58 49 105 1.21e-12 67.8
Msa0219990 MtrunA17_Chr7g0228531 39.344 122 54 5 2 113 264 375 1.51e-12 68.9
Msa0219990 MtrunA17_Chr5g0421201 48.000 50 26 0 13 62 15 64 1.98e-12 65.5
Msa0219990 MtrunA17_Chr6g0480581 50.877 57 28 0 1 57 47 103 2.31e-12 66.6
Msa0219990 MtrunA17_Chr5g0441131 45.614 57 30 1 2 57 56 112 2.10e-11 62.4
Msa0219990 MtrunA17_Chr7g0228401 42.254 71 38 2 2 72 323 390 2.21e-11 65.5
Msa0219990 MtrunA17_Chr4g0013361 47.619 63 31 2 1 62 56 117 3.13e-11 63.9
Msa0219990 MtrunA17_Chr3g0139671 44.828 58 32 0 2 59 129 186 3.77e-11 65.1
Msa0219990 MtrunA17_Chr7g0238631 46.552 58 31 0 2 59 157 214 4.99e-11 64.3
Msa0219990 MtrunA17_Chr1g0157731 43.103 58 33 0 2 59 135 192 8.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0219990 AT3G23250.2 36.747 166 83 4 1 145 1 165 2.92e-27 108
Msa0219990 AT3G23250.1 36.747 166 83 4 1 145 58 222 3.21e-26 107
Msa0219990 AT2G31180.1 71.429 63 18 0 1 63 58 120 1.97e-24 101
Msa0219990 AT5G14750.4 63.235 68 24 1 1 67 1 68 2.25e-24 98.2
Msa0219990 AT5G14750.2 63.235 68 24 1 1 67 1 68 2.25e-24 98.2
Msa0219990 AT5G14750.3 63.235 68 24 1 1 67 28 95 7.21e-24 97.4
Msa0219990 AT5G35550.2 45.370 108 58 1 2 108 64 171 2.35e-23 98.6
Msa0219990 AT5G14750.1 63.235 68 24 1 1 67 62 129 2.42e-23 97.1
Msa0219990 AT1G16490.1 69.492 59 18 0 1 59 60 118 4.10e-23 98.2
Msa0219990 AT1G06180.1 71.186 59 17 0 1 59 58 116 7.42e-23 97.1
Msa0219990 AT5G35550.1 45.370 108 58 1 2 108 61 168 1.21e-22 96.7
Msa0219990 AT3G12820.2 64.516 62 22 0 1 62 12 73 2.25e-22 94.4
Msa0219990 AT1G22640.3 60.000 60 24 0 1 60 1 60 3.30e-22 94.0
Msa0219990 AT3G12820.1 64.516 62 22 0 1 62 60 121 7.83e-22 94.0
Msa0219990 AT5G15310.4 68.333 60 19 0 2 61 59 118 8.73e-22 94.0
Msa0219990 AT3G27920.1 58.462 65 27 0 1 65 60 124 8.84e-22 93.6
Msa0219990 AT5G15310.2 68.333 60 19 0 2 61 59 118 1.07e-21 95.1
Msa0219990 AT5G15310.1 68.333 60 19 0 2 61 59 118 1.10e-21 95.5
Msa0219990 AT1G22640.1 60.000 60 24 0 1 60 58 117 1.54e-21 93.6
Msa0219990 AT5G40330.1 64.407 59 21 0 1 59 58 116 1.59e-21 92.4
Msa0219990 AT1G79180.1 65.574 61 21 0 1 61 60 120 1.71e-21 94.4
Msa0219990 AT5G12870.1 63.934 61 22 0 1 61 64 124 2.56e-21 93.6
Msa0219990 AT1G79180.2 65.574 61 21 0 1 61 93 153 2.65e-21 94.4
Msa0219990 AT3G13540.1 56.452 62 27 0 1 62 69 130 4.05e-21 92.0
Msa0219990 AT4G28110.1 60.000 60 24 0 2 61 59 118 4.37e-21 92.8
Msa0219990 AT4G34990.1 59.016 61 25 0 1 61 58 118 5.28e-21 92.4
Msa0219990 AT4G38620.1 58.333 60 25 0 1 60 58 117 5.42e-21 92.4
Msa0219990 AT3G01140.2 68.333 60 19 0 2 61 59 118 6.02e-21 93.6
Msa0219990 AT5G52600.1 66.667 57 19 0 2 58 59 115 6.30e-21 90.5
Msa0219990 AT3G01140.1 68.333 60 19 0 2 61 102 161 9.24e-21 93.6
Msa0219990 AT4G09460.1 60.000 60 24 0 1 60 58 117 1.12e-20 90.5
Msa0219990 AT5G16770.4 63.333 60 22 0 2 61 59 118 1.29e-20 92.4
Msa0219990 AT5G16770.3 63.333 60 22 0 2 61 59 118 1.29e-20 92.4
Msa0219990 AT5G16770.1 63.333 60 22 0 2 61 59 118 1.39e-20 92.4
Msa0219990 AT5G16770.2 63.333 60 22 0 2 61 59 118 1.39e-20 92.4
Msa0219990 AT1G35515.1 58.333 60 25 0 1 60 58 117 1.98e-20 89.4
Msa0219990 AT3G61250.1 64.407 59 21 0 2 60 59 117 2.18e-20 91.3
Msa0219990 AT3G08500.1 66.102 59 20 0 1 59 76 134 2.20e-20 92.0
Msa0219990 AT5G26660.2 55.405 74 24 1 1 74 27 91 2.59e-20 91.3
Msa0219990 AT2G16720.1 58.333 60 25 0 1 60 58 117 2.86e-20 90.1
Msa0219990 AT1G74430.1 61.290 62 24 0 1 62 58 119 3.32e-20 90.1
Msa0219990 AT5G65230.1 63.333 60 22 0 2 61 59 118 3.58e-20 90.9
Msa0219990 AT1G56160.1 66.102 59 20 0 1 59 60 118 3.73e-20 90.5
Msa0219990 AT1G71030.2 58.333 60 25 0 2 61 13 72 4.01e-20 87.8
Msa0219990 AT1G71030.1 58.333 60 25 0 2 61 27 86 4.86e-20 87.8
Msa0219990 AT5G54230.1 61.667 60 23 0 2 61 59 118 5.52e-20 90.5
Msa0219990 AT5G26660.1 55.405 74 24 1 1 74 58 122 7.90e-20 90.5
Msa0219990 AT4G05100.1 60.000 60 24 0 2 61 60 119 8.49e-20 89.7
Msa0219990 AT4G01680.3 62.712 59 22 0 1 59 58 116 8.72e-20 88.2
Msa0219990 AT5G06100.1 59.649 57 23 0 2 58 79 135 1.14e-19 90.9
Msa0219990 AT3G02940.2 61.667 60 23 0 2 61 59 118 1.32e-19 89.0
Msa0219990 AT5G07700.1 48.246 114 54 3 2 114 59 168 1.34e-19 89.4
Msa0219990 AT5G07700.2 48.246 114 54 3 2 114 59 168 1.34e-19 89.4
Msa0219990 AT5G06100.5 59.649 57 23 0 2 58 79 135 1.54e-19 90.9
Msa0219990 AT5G06100.2 59.649 57 23 0 2 58 79 135 1.54e-19 90.9
Msa0219990 AT5G06100.3 59.649 57 23 0 2 58 79 135 1.54e-19 90.9
Msa0219990 AT5G06100.4 59.649 57 23 0 2 58 79 135 1.54e-19 90.9
Msa0219990 AT3G02940.1 61.667 60 23 0 2 61 59 118 1.54e-19 89.0
Msa0219990 AT3G02940.3 61.667 60 23 0 2 61 59 118 1.54e-19 89.0
Msa0219990 AT1G57560.2 55.738 61 27 0 1 61 58 118 1.63e-19 88.2
Msa0219990 AT1G66230.1 44.643 112 48 2 2 102 59 167 1.91e-19 88.2
Msa0219990 AT4G22680.1 60.000 60 24 0 2 61 59 118 2.22e-19 87.8
Msa0219990 AT1G57560.1 55.738 61 27 0 1 61 58 118 2.28e-19 88.6
Msa0219990 AT5G60890.1 63.793 58 21 0 2 59 59 116 2.32e-19 88.2
Msa0219990 AT4G12350.1 60.000 60 24 0 2 61 59 118 2.39e-19 87.8
Msa0219990 AT4G01680.1 62.712 59 22 0 1 59 58 116 2.61e-19 88.6
Msa0219990 AT3G12720.1 58.333 60 25 0 1 60 68 127 2.91e-19 88.2
Msa0219990 AT4G01680.2 62.712 59 22 0 1 59 70 128 2.99e-19 88.6
Msa0219990 AT3G62610.1 61.017 59 23 0 1 59 58 116 3.00e-19 88.6
Msa0219990 AT3G49690.1 58.333 60 25 0 1 60 59 118 3.08e-19 88.2
Msa0219990 AT4G17785.1 55.738 61 27 0 1 61 59 119 3.54e-19 88.6
Msa0219990 AT4G17785.2 55.738 61 27 0 1 61 59 119 4.09e-19 88.2
Msa0219990 AT5G14340.1 61.017 59 23 0 1 59 70 128 4.74e-19 87.0
Msa0219990 AT5G52260.1 60.656 61 24 0 1 61 58 118 4.90e-19 86.7
Msa0219990 AT5G16600.1 60.656 61 24 0 1 61 58 118 5.30e-19 87.8
Msa0219990 AT3G01530.1 57.895 57 24 0 1 57 71 127 5.55e-19 85.1
Msa0219990 AT5G10280.1 61.667 60 23 0 2 61 59 118 6.15e-19 87.4
Msa0219990 AT1G09540.1 44.944 89 38 1 1 89 58 135 6.50e-19 87.8
Msa0219990 AT1G18570.1 63.333 60 22 0 2 61 60 119 7.47e-19 87.4
Msa0219990 AT1G74650.1 64.407 59 21 0 2 60 59 117 7.67e-19 87.0
Msa0219990 AT5G61420.2 61.667 60 23 0 2 61 59 118 7.86e-19 87.8
Msa0219990 AT3G13890.2 60.000 60 24 0 1 60 58 117 9.14e-19 87.4
Msa0219990 AT4G21440.1 58.333 60 25 0 2 61 59 118 9.37e-19 87.4
Msa0219990 AT3G13890.1 60.000 60 24 0 1 60 67 126 9.86e-19 87.4
Msa0219990 AT5G56110.1 62.069 58 22 0 2 59 59 116 1.04e-18 86.7
Msa0219990 AT3G27810.2 57.377 61 25 1 1 61 17 76 1.07e-18 83.6
Msa0219990 AT3G11440.2 56.140 57 25 0 2 58 88 144 1.26e-18 87.8
Msa0219990 AT5G40350.2 55.738 61 27 0 1 61 18 78 1.30e-18 83.2
Msa0219990 AT2G32460.1 63.158 57 21 0 2 58 65 121 1.32e-18 87.8
Msa0219990 AT2G32460.2 63.158 57 21 0 2 58 53 109 1.38e-18 87.8
Msa0219990 AT3G11440.3 56.140 57 25 0 2 58 88 144 1.51e-18 87.8
Msa0219990 AT3G11440.4 56.140 57 25 0 2 58 88 144 1.51e-18 87.8
Msa0219990 AT3G11440.1 56.140 57 25 0 2 58 88 144 1.51e-18 87.8
Msa0219990 AT5G65790.1 55.000 60 27 0 1 60 59 118 2.07e-18 86.7
Msa0219990 AT1G74080.1 61.667 60 23 0 2 61 59 118 2.08e-18 85.9
Msa0219990 AT5G57620.1 53.125 64 30 0 1 64 59 122 2.49e-18 85.9
Msa0219990 AT5G07690.1 56.579 76 32 1 2 76 59 134 2.70e-18 85.9
Msa0219990 AT1G63910.1 59.016 61 25 0 1 61 58 118 3.14e-18 85.9
Msa0219990 AT3G27810.1 57.377 61 25 1 1 61 66 125 3.18e-18 83.6
Msa0219990 AT5G49330.1 57.627 59 25 0 1 59 58 116 3.25e-18 85.5
Msa0219990 AT5G62320.1 55.000 60 27 0 2 61 67 126 3.43e-18 84.0
Msa0219990 AT5G40350.1 55.738 61 27 0 1 61 63 123 3.51e-18 83.2
Msa0219990 AT3G47600.2 61.667 60 23 0 2 61 53 112 4.16e-18 85.1
Msa0219990 AT3G24310.1 60.345 58 23 0 1 58 64 121 4.67e-18 84.0
Msa0219990 AT1G34670.1 60.000 60 24 0 2 61 59 118 4.99e-18 85.1
Msa0219990 AT3G30210.1 42.718 103 55 1 1 103 73 171 5.25e-18 84.0
Msa0219990 AT4G13480.1 60.345 58 23 0 1 58 52 109 6.23e-18 83.6
Msa0219990 AT5G62470.1 61.667 60 23 0 2 61 58 117 6.71e-18 84.7
Msa0219990 AT4G37780.1 52.174 69 29 1 1 69 59 123 7.25e-18 84.0
Msa0219990 AT1G68320.1 56.897 58 25 0 1 58 65 122 7.50e-18 83.6
Msa0219990 AT3G47600.1 61.667 60 23 0 2 61 59 118 7.56e-18 84.3
Msa0219990 AT4G26930.1 57.143 56 24 0 2 57 66 121 7.71e-18 85.1
Msa0219990 AT5G62470.2 61.667 60 23 0 2 61 59 118 7.80e-18 84.7
Msa0219990 AT3G28910.1 61.667 60 23 0 2 61 59 118 7.88e-18 84.3
Msa0219990 AT2G47460.1 54.237 59 27 0 1 59 58 116 9.22e-18 84.7
Msa0219990 AT5G59780.2 55.172 58 26 0 1 58 33 90 9.35e-18 82.0
Msa0219990 AT1G48000.1 57.895 57 24 0 1 57 78 134 9.83e-18 82.4
Msa0219990 AT3G46130.3 55.172 58 26 0 1 58 23 80 1.12e-17 82.0
Msa0219990 AT5G23000.1 53.333 60 28 0 1 60 59 118 1.22e-17 83.6
Msa0219990 AT1G08810.1 57.353 68 29 0 2 69 59 126 1.43e-17 82.8
Msa0219990 AT3G46130.4 55.172 58 26 0 1 58 33 90 1.47e-17 81.6
Msa0219990 AT5G59780.3 55.172 58 26 0 1 58 54 111 1.53e-17 81.6
Msa0219990 AT5G55020.1 53.226 62 29 0 2 63 73 134 2.06e-17 84.3
Msa0219990 AT4G25560.1 53.226 62 29 0 1 62 56 117 2.11e-17 82.4
Msa0219990 AT3G46130.1 55.172 58 26 0 1 58 55 112 2.28e-17 81.6
Msa0219990 AT1G25340.2 44.944 89 38 2 1 89 59 136 2.45e-17 82.0
Msa0219990 AT1G18710.1 55.932 59 26 0 1 59 58 116 2.59e-17 81.6
Msa0219990 AT1G25340.1 44.944 89 38 2 1 89 64 141 3.47e-17 81.6
Msa0219990 AT3G48920.1 57.895 57 24 0 1 57 64 120 3.79e-17 81.3
Msa0219990 AT1G25340.3 44.944 89 38 2 1 89 59 136 4.60e-17 81.6
Msa0219990 AT2G36890.1 55.000 60 27 0 1 60 59 118 7.07e-17 80.9
Msa0219990 AT2G47190.1 55.172 58 26 0 1 58 66 123 7.92e-17 80.5
Msa0219990 AT3G53200.2 56.897 58 25 0 1 58 22 79 1.13e-16 78.6
Msa0219990 AT2G36890.2 55.000 60 27 0 1 60 100 159 1.18e-16 80.9
Msa0219990 AT1G66370.1 55.172 58 26 0 1 58 54 111 1.58e-16 79.0
Msa0219990 AT3G53200.1 56.897 58 25 0 1 58 55 112 2.29e-16 78.6
Msa0219990 AT3G28470.1 59.615 52 21 0 2 53 59 110 1.73e-15 77.4
Msa0219990 AT1G66380.3 52.174 69 33 0 1 69 21 89 2.09e-15 72.0
Msa0219990 AT5G40360.1 34.091 132 78 3 2 133 202 324 2.75e-15 77.0
Msa0219990 AT2G26960.1 54.386 57 26 0 1 57 66 122 2.83e-15 77.4
Msa0219990 AT3G27785.1 46.154 65 35 0 2 66 233 297 1.16e-14 75.9
Msa0219990 AT5G11050.1 31.527 203 96 7 2 192 149 320 3.46e-14 74.3
Msa0219990 AT3G09230.1 50.769 65 32 0 2 66 99 163 3.51e-14 73.9
Msa0219990 AT4G18770.1 43.478 69 38 1 2 69 261 329 4.56e-14 73.9
Msa0219990 AT2G25230.1 49.254 67 29 2 2 68 70 131 5.80e-14 71.2
Msa0219990 AT3G06490.1 46.667 75 39 1 1 75 65 138 1.19e-13 72.0
Msa0219990 AT1G69560.2 43.478 69 39 0 2 70 167 235 1.37e-13 72.0
Msa0219990 AT1G69560.1 43.478 69 39 0 2 70 151 219 1.39e-13 71.6
Msa0219990 AT1G66380.1 53.030 66 31 0 1 66 54 119 1.51e-13 67.8
Msa0219990 AT5G49620.1 46.667 75 39 1 1 75 72 145 1.92e-13 70.9
Msa0219990 AT4G25560.2 56.522 46 20 0 16 61 5 50 8.06e-13 67.8
Msa0219990 AT5G58850.1 37.179 78 42 1 2 79 149 219 9.57e-13 69.7
Msa0219990 AT5G59780.1 58.140 43 18 0 16 58 4 46 1.20e-12 66.2
Msa0219990 AT2G26950.1 50.980 51 25 0 1 51 62 112 1.40e-12 68.9
Msa0219990 AT1G26780.2 40.580 69 41 0 2 70 142 210 1.64e-12 68.6
Msa0219990 AT1G56650.1 50.000 70 35 0 1 70 54 123 1.99e-12 67.0
Msa0219990 AT3G46130.2 58.140 43 18 0 16 58 4 46 2.03e-12 66.2
Msa0219990 AT1G17950.1 45.205 73 31 1 1 73 48 111 2.05e-12 67.0
Msa0219990 AT1G26780.1 40.580 69 41 0 2 70 142 210 2.41e-12 67.4
Msa0219990 AT1G66390.1 55.172 58 26 0 1 58 54 111 3.85e-12 66.2
Msa0219990 AT5G11510.5 44.828 58 32 0 2 59 125 182 6.02e-12 67.8
Msa0219990 AT5G11510.3 44.828 58 32 0 2 59 125 182 6.04e-12 68.2
Msa0219990 AT5G11510.1 44.828 58 32 0 2 59 125 182 6.04e-12 68.2
Msa0219990 AT5G11510.4 44.828 58 32 0 2 59 125 182 6.04e-12 68.2
Msa0219990 AT5G11510.2 44.828 58 32 0 2 59 125 182 6.55e-12 67.8
Msa0219990 AT3G55730.1 48.276 58 30 0 2 59 100 157 6.90e-12 67.0
Msa0219990 AT5G40430.1 44.118 68 33 2 2 69 97 159 7.86e-12 65.5
Msa0219990 AT2G39880.1 49.123 57 29 0 2 58 94 150 7.99e-12 66.6
Msa0219990 AT4G37260.1 45.614 57 31 0 2 58 57 113 1.42e-11 65.5
Msa0219990 AT4G33450.1 46.875 64 34 0 2 65 63 126 1.61e-11 64.7
Msa0219990 AT2G23290.1 47.368 57 30 0 2 58 57 113 1.87e-11 65.1
Msa0219990 AT3G60460.1 50.000 58 28 1 1 57 57 114 2.57e-11 64.7
Msa0219990 AT2G37630.1 35.106 94 49 2 2 95 51 132 2.59e-11 65.1
Msa0219990 AT5G02320.1 44.828 58 32 0 2 59 171 228 5.64e-11 64.7
Msa0219990 AT5G02320.2 44.828 58 32 0 2 59 171 228 5.64e-11 64.7
Msa0219990 AT5G02320.3 44.828 58 32 0 2 59 111 168 8.86e-11 63.9

Find 92 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGAATAATTATCTTTA+TGG 0.087497 2_1:-67984141 None:intergenic
TAAAACTCCTTCAAATTTAT+TGG 0.117024 2_1:-67988445 None:intergenic
TAAAACTCCTTCAAGTTTAT+TGG 0.126920 2_1:-67988916 None:intergenic
TGAAAATGACCTTGCTTTAA+TGG 0.133555 2_1:+67989214 Msa0219990:CDS
AGGATTTGAGTGAGAATTTC+TGG 0.155231 2_1:+67989093 Msa0219990:CDS
GATATTTGATTTGCAATATT+AGG 0.201381 2_1:-67988480 None:intergenic
TTTCCATTGTAAGGTGATTA+TGG 0.216947 2_1:-67989151 None:intergenic
ATTATTTGAATTTGAATCTT+TGG 0.220751 2_1:-67988403 None:intergenic
TCCATTGTAGGGTGATTATA+GGG 0.235335 2_1:-67988651 None:intergenic
CTGTGTACGATGTTGAATTT+TGG 0.241627 2_1:+67989351 Msa0219990:CDS
TTCCATTGTAGGGTGATTAT+AGG 0.248697 2_1:-67988652 None:intergenic
TATACGATACCTGCAAATTT+AGG 0.256637 2_1:-67983904 None:intergenic
TTATTGGCTTCTTCCAATAT+AGG 0.256671 2_1:-67988429 None:intergenic
ATGAATAATGCATCCATAAA+AGG 0.286876 2_1:-67988837 None:intergenic
TTCAAATAATCACCCTATAT+TGG 0.288064 2_1:+67988416 Msa0219990:CDS
GACAATCGACTTGCAATATT+AGG 0.293210 2_1:-67988951 None:intergenic
CGTGATTGCTTCAAATTTAC+CGG 0.299900 2_1:+67988287 Msa0219990:CDS
TACTACCACCACCAAATTCT+TGG 0.304717 2_1:-67983729 None:intergenic
ACAGGTACACACCAAGAATT+TGG 0.313612 2_1:+67983718 None:intergenic
TATTGGCTTCTTCCAATATA+GGG 0.314144 2_1:-67988428 None:intergenic
GTGATTCTTTACCTCATTAT+CGG 0.317179 2_1:-67988316 None:intergenic
TTCTTGGTTTCTTCCATTGT+AGG 0.324003 2_1:-67988663 None:intergenic
TATGAATTGTCTATCATATA+TGG 0.327989 2_1:-67988624 None:intergenic
TAACAATTTATTCTGCAATA+TGG 0.335714 2_1:-67989376 None:intergenic
TGTGAACTGTCTATCATATA+AGG 0.339402 2_1:-67989122 None:intergenic
TAGAAAGTGTCTATCATATA+TGG 0.352614 2_1:-67988891 None:intergenic
ATTGCTTATGTTACTAGGTA+TGG 0.365953 2_1:+67983859 Msa0219990:five_prime_UTR
CTAGGTATGGCTGTTGGAAT+TGG 0.368638 2_1:+67983872 Msa0219990:five_prime_UTR
CGACAACTACCTAAATTTGC+AGG 0.368724 2_1:+67983895 Msa0219990:five_prime_UTR
TTTAATGGATGCATTATTCA+TGG 0.383713 2_1:+67989229 Msa0219990:CDS
AGATAGTGAACTCGTAATAT+TGG 0.395570 2_1:-67988718 None:intergenic
TTCTATGCCAATAAACTTGA+AGG 0.399423 2_1:+67988909 Msa0219990:CDS
AGTTGATTGCTTATGTTACT+AGG 0.399699 2_1:+67983854 Msa0219990:five_prime_UTR
GCAGTATCCTGGAGTTCTGT+TGG 0.399944 2_1:-67984108 None:intergenic
AGAACCCCTTGTGACAATAA+TGG 0.416910 2_1:+67983793 Msa0219990:five_prime_UTR
GAGAATTCTTTGCAGTATCC+TGG 0.427022 2_1:-67984119 None:intergenic
AGGTCATTGTCATCAAGAAT+TGG 0.433113 2_1:-67989047 None:intergenic
GAAGAAGCCAATAAATTTGA+AGG 0.437102 2_1:+67988438 Msa0219990:CDS
CTTTATAAAACGCTTCTTCA+AGG 0.438316 2_1:-67988349 None:intergenic
TCTTGGTTTCTTCCATTGTA+GGG 0.439231 2_1:-67988662 None:intergenic
AGACTGTGAGTGGGAATGAT+TGG 0.449963 2_1:+67989252 Msa0219990:CDS
GACAATAATGGATTGAGAAA+AGG 0.457500 2_1:+67983805 Msa0219990:five_prime_UTR
CTCAATCCATTATTGTCACA+AGG 0.493237 2_1:-67983799 None:intergenic
CTGAGGCCAAATATCAAAAG+AGG 0.509978 2_1:+67984301 Msa0219990:CDS
CAAGAGAATCCGCTTGAAGA+TGG 0.512963 2_1:-67988747 None:intergenic
AATAGTGTAGCTTCTTCAGT+TGG 0.519397 2_1:-67989296 None:intergenic
AGTGTAGCTTCTTCAGTTGG+AGG 0.523199 2_1:-67989293 None:intergenic
GAAGAAACCAAGAAACTTGA+CGG 0.523731 2_1:+67988672 Msa0219990:CDS
TATTCATGTTCACACTCTGC+AGG 0.528775 2_1:-67989320 None:intergenic
CAAGACAAATCGCTTGAAGC+TGG 0.530400 2_1:-67988510 None:intergenic
CGATTTGTCTTGCATAACAA+TGG 0.536383 2_1:+67988521 Msa0219990:CDS
GTTCTCACCATGGTCTCTAA+AGG 0.539675 2_1:-67983775 None:intergenic
TGTATGTTTCCATAAAAGAA+AGG 0.541995 2_1:-67988569 None:intergenic
ACTTGTTCCAACAGAACTCC+AGG 0.542485 2_1:+67984101 Msa0219990:five_prime_UTR
ATGTTACTAGGTATGGCTGT+TGG 0.545648 2_1:+67983866 Msa0219990:five_prime_UTR
TGAATGCATCCATAAAATGA+AGG 0.545826 2_1:-67989067 None:intergenic
ACCTCATTATCGGTTCTCCC+CGG 0.550386 2_1:-67988306 None:intergenic
TGGATTCTCATATGATATTG+TGG 0.550630 2_1:-67989027 None:intergenic
GTGGGAAGAGCTGTAGACTA+AGG 0.551758 2_1:+67984266 Msa0219990:five_prime_UTR
TCACCATGGTCTCTAAAGGC+TGG 0.553133 2_1:-67983771 None:intergenic
TTTCAGGGCTTGAAAGGTGT+GGG 0.557460 2_1:+67984248 Msa0219990:intron
CAATCCATTATTGTCACAAG+GGG 0.566200 2_1:-67983797 None:intergenic
TGCATTCTCTTGCATAACAA+TGG 0.567171 2_1:+67988992 Msa0219990:CDS
GTGATTGCTTCAAATTTACC+GGG 0.570836 2_1:+67988288 Msa0219990:CDS
CAAGAGAATGCACTTGAAGA+TGG 0.571011 2_1:-67988981 None:intergenic
AAGAATATTAAGTCTAAGCG+TGG 0.575339 2_1:+67988369 Msa0219990:CDS
ATGGATTGAGAAAAGGCACT+TGG 0.575990 2_1:+67983812 Msa0219990:five_prime_UTR
ATAATGAGGTAAAGAATCAC+TGG 0.577807 2_1:+67988319 Msa0219990:CDS
GTGTAGCTTCTTCAGTTGGA+GGG 0.583237 2_1:-67989292 None:intergenic
ACCGGGGAGAACCGATAATG+AGG 0.590459 2_1:+67988305 Msa0219990:CDS
CGGTAAATTTGAAGCAATCA+CGG 0.592595 2_1:-67988286 None:intergenic
TCAATCCATTATTGTCACAA+GGG 0.597815 2_1:-67983798 None:intergenic
GTCACAAGGGGTTCTCACCA+TGG 0.605010 2_1:-67983785 None:intergenic
TCTTCGCAACCATCTTCAAG+CGG 0.608733 2_1:+67988738 Msa0219990:CDS
CCATTGTAGGGTGATTATAG+GGG 0.613750 2_1:-67988650 None:intergenic
CCCCTATAATCACCCTACAA+TGG 0.613964 2_1:+67988650 Msa0219990:CDS
CTACCAGCCTTTAGAGACCA+TGG 0.614533 2_1:+67983768 Msa0219990:five_prime_UTR
TGAGGCCAAATATCAAAAGA+GGG 0.619320 2_1:+67984302 Msa0219990:CDS
GGTACACACCAAGAATTTGG+TGG 0.620878 2_1:+67983721 None:intergenic
TAAGGTGGATGAACTATCTG+AGG 0.621739 2_1:+67984284 Msa0219990:exon
CCATTGTAAGGTGATTATGG+AGG 0.622467 2_1:-67989148 None:intergenic
CCTCCATAATCACCTTACAA+TGG 0.623207 2_1:+67989148 Msa0219990:CDS
AAAAGGCACTTGGACTCATG+AGG 0.629560 2_1:+67983822 Msa0219990:five_prime_UTR
AGGGAACTTTAATCAACAAG+AGG 0.630408 2_1:+67984321 Msa0219990:CDS
ATAATGCATCCATAAAAGGA+AGG 0.636763 2_1:-67988833 None:intergenic
ATATTAAGTCTAAGCGTGGA+AGG 0.639098 2_1:+67988373 Msa0219990:CDS
GGAAGAGCTGTAGACTAAGG+TGG 0.649277 2_1:+67984269 Msa0219990:five_prime_UTR
ATAATGCATCCATTAAAGCA+AGG 0.651183 2_1:-67989223 None:intergenic
ACACACCAAGAATTTGGTGG+TGG 0.653554 2_1:+67983724 None:intergenic
TATTCATGGAGACTGTGAGT+GGG 0.669915 2_1:+67989243 Msa0219990:CDS
TTATTCATGGAGACTGTGAG+TGG 0.700722 2_1:+67989242 Msa0219990:CDS
TGATTGCTTCAAATTTACCG+GGG 0.729789 2_1:+67988289 Msa0219990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATATTTTAAATTATT+AGG + chr2_1:67988207-67988226 Msa0219990:intron 0.0%
!! ATTAAGAATAATTATCTTTA+TGG - chr2_1:67984144-67984163 None:intergenic 10.0%
!! TTAATAATTAATGTGTAAAT+TGG + chr2_1:67984159-67984178 Msa0219990:intron 10.0%
!!! TTGAATTATTTAAATTTTTC+GGG + chr2_1:67984814-67984833 Msa0219990:intron 10.0%
!!! TTGAATTATTTAAAATTTTC+GGG + chr2_1:67984928-67984947 Msa0219990:intron 10.0%
!!! TTTAATATAACTTTACTTTT+AGG + chr2_1:67986044-67986063 Msa0219990:intron 10.0%
!! CAAAAATCTAAATTAATTTA+AGG - chr2_1:67987530-67987549 None:intergenic 10.0%
!!! ATAATATCATAATTTTTCGT+TGG + chr2_1:67983943-67983962 Msa0219990:intron 15.0%
!!! TTTTAAATTAATTTTCTCAC+AGG + chr2_1:67984076-67984095 Msa0219990:intron 15.0%
!!! AATAAATTAACATACTTTTG+TGG + chr2_1:67984459-67984478 Msa0219990:intron 15.0%
!! CAAAAAAAAAAAATCATTGT+TGG - chr2_1:67984590-67984609 None:intergenic 15.0%
!! TTTAAAAAATCAACGATTAT+AGG - chr2_1:67985038-67985057 None:intergenic 15.0%
!!! ATCGTTGATTTTTTAAATTT+TGG + chr2_1:67985041-67985060 Msa0219990:intron 15.0%
!!! TCGTTGATTTTTTAAATTTT+GGG + chr2_1:67985042-67985061 Msa0219990:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG - chr2_1:67985347-67985366 None:intergenic 15.0%
!!! ATTTTGTGTATTTTTATACA+AGG + chr2_1:67985891-67985910 Msa0219990:intron 15.0%
!! ACTAATATAATATTGTAAAC+AGG - chr2_1:67985999-67986018 None:intergenic 15.0%
!! TTGCATATATTTAATTAGTT+TGG + chr2_1:67986810-67986829 Msa0219990:intron 15.0%
!!! AGTTTGTTTAGTTAATTTTT+AGG + chr2_1:67986959-67986978 Msa0219990:intron 15.0%
!!! GTTTGTTTAGTTAATTTTTA+GGG + chr2_1:67986960-67986979 Msa0219990:intron 15.0%
!! AGAATATATATAAAAGTGAA+TGG - chr2_1:67987181-67987200 None:intergenic 15.0%
!!! CAAATTTGAAATTGTTTATT+TGG - chr2_1:67987938-67987957 None:intergenic 15.0%
!! AAATTTGAAAAAAAAATCAC+AGG + chr2_1:67987951-67987970 Msa0219990:intron 15.0%
!! AATTTGAAAAAAAAATCACA+GGG + chr2_1:67987952-67987971 Msa0219990:intron 15.0%
!! TGGATAAAGTTAAAATTATA+AGG + chr2_1:67988148-67988167 Msa0219990:intron 15.0%
!! ATTATTTGAATTTGAATCTT+TGG - chr2_1:67988406-67988425 None:intergenic 15.0%
!! ATGTTAATTTATTCTCTTTG+AGG - chr2_1:67984452-67984471 None:intergenic 20.0%
!!! TGAAATGTTTCTATATATGA+AGG - chr2_1:67984499-67984518 None:intergenic 20.0%
!!! TTTTCAACGGTTAATTTTAA+TGG - chr2_1:67984762-67984781 None:intergenic 20.0%
!!! AATTATTTAAATTTTTCGGG+TGG + chr2_1:67984817-67984836 Msa0219990:intron 20.0%
!!! ATTATTTAAATTTTTCGGGT+GGG + chr2_1:67984818-67984837 Msa0219990:intron 20.0%
!!! GCTTTTATACAATTTTATGT+CGG - chr2_1:67984889-67984908 None:intergenic 20.0%
!!! AATTATTTAAAATTTTCGGG+TGG + chr2_1:67984931-67984950 Msa0219990:intron 20.0%
!!! GATTTTATACAATTTTGTGT+CGG - chr2_1:67985003-67985022 None:intergenic 20.0%
!!! CGTTGATTTTTTAAATTTTG+GGG + chr2_1:67985043-67985062 Msa0219990:intron 20.0%
!!! GTTGATTTTTTAAATTTTGG+GGG + chr2_1:67985044-67985063 Msa0219990:intron 20.0%
!!! TTTTTAGATGGAATTTGTTA+GGG - chr2_1:67985433-67985452 None:intergenic 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG - chr2_1:67985434-67985453 None:intergenic 20.0%
!!! TATAGTTTTACTAAAACTCA+TGG + chr2_1:67985817-67985836 Msa0219990:intron 20.0%
!!! TATATTTTTGGATTGTTTGT+TGG + chr2_1:67985844-67985863 Msa0219990:intron 20.0%
!! TTTATGAGTAGATTTATTCT+AGG + chr2_1:67986095-67986114 Msa0219990:intron 20.0%
!! TTATTATCAAACAATTGGTT+CGG - chr2_1:67986295-67986314 None:intergenic 20.0%
!! CAATCTTATTATCAAACAAT+TGG - chr2_1:67986300-67986319 None:intergenic 20.0%
!! ACTAACTTACAAACATAAAA+GGG - chr2_1:67986338-67986357 None:intergenic 20.0%
!! TACTAACTTACAAACATAAA+AGG - chr2_1:67986339-67986358 None:intergenic 20.0%
!!! ATTGATTCTTTTGGATAATT+TGG + chr2_1:67986376-67986395 Msa0219990:intron 20.0%
!!! ATTTTTCACAAACACATTAT+GGG - chr2_1:67986417-67986436 None:intergenic 20.0%
!! AAATGGCATAATATATCAAA+AGG - chr2_1:67987211-67987230 None:intergenic 20.0%
!!! ATTATGCCATTTGATATTAT+TGG + chr2_1:67987219-67987238 Msa0219990:intron 20.0%
!!! AAATAGAGAAATTTTGTAAG+AGG - chr2_1:67987294-67987313 None:intergenic 20.0%
!! GTTAGATAACAAATAAATCT+TGG - chr2_1:67987383-67987402 None:intergenic 20.0%
!!! TTGTTTGTTATATTCAACAT+TGG - chr2_1:67987417-67987436 None:intergenic 20.0%
!! ATTTGAAAAAAAAATCACAG+GGG + chr2_1:67987953-67987972 Msa0219990:intron 20.0%
!! AGATAAGCAAAATAAAGTTA+TGG + chr2_1:67988002-67988021 Msa0219990:intron 20.0%
!! TAAATAGAATTCTCTTACAA+AGG - chr2_1:67988058-67988077 None:intergenic 20.0%
!!! TTTGAAAGTTCTAATACATA+TGG + chr2_1:67988128-67988147 Msa0219990:intron 20.0%
!! TAAAACTCCTTCAAATTTAT+TGG - chr2_1:67988448-67988467 None:intergenic 20.0%
!!! GATATTTGATTTGCAATATT+AGG - chr2_1:67988483-67988502 None:intergenic 20.0%
!!! ACAATTTTAGTGAGAATTTT+TGG + chr2_1:67988595-67988614 Msa0219990:CDS 20.0%
!! TATGAATTGTCTATCATATA+TGG - chr2_1:67988627-67988646 None:intergenic 20.0%
!! ATCATAATTTTTCGTTGGAT+AGG + chr2_1:67983948-67983967 Msa0219990:intron 25.0%
! ATCAAACTTCATGAAAAACT+GGG + chr2_1:67984355-67984374 Msa0219990:CDS 25.0%
! TGTGTTCATAAAAAATCCAT+GGG - chr2_1:67984420-67984439 None:intergenic 25.0%
! TTGTGTTCATAAAAAATCCA+TGG - chr2_1:67984421-67984440 None:intergenic 25.0%
! AAAAAAAAATCATTGTTGGC+TGG - chr2_1:67984586-67984605 None:intergenic 25.0%
!!! AAACATTTGCTATTTAAGAG+AGG - chr2_1:67984657-67984676 None:intergenic 25.0%
! AGACATACACTATACATATT+TGG - chr2_1:67984688-67984707 None:intergenic 25.0%
!!! GGCTTTAAACAATTTTTCAA+CGG - chr2_1:67984775-67984794 None:intergenic 25.0%
!!! TACAATTTTATGTCGGTTTT+AGG - chr2_1:67984882-67984901 None:intergenic 25.0%
!!! ATTTTTTAAATTTTGGGGGT+GGG + chr2_1:67985048-67985067 Msa0219990:intron 25.0%
!! TAAGTTTGTTTGTTCAAAGT+GGG - chr2_1:67985123-67985142 None:intergenic 25.0%
!! TTGTATTTTTCTCAAACTCT+AGG + chr2_1:67985189-67985208 Msa0219990:intron 25.0%
!! TGTATTTTTCTCAAACTCTA+GGG + chr2_1:67985190-67985209 Msa0219990:intron 25.0%
! CTACCATATTAATGATCTTA+CGG + chr2_1:67985513-67985532 Msa0219990:intron 25.0%
! TACCATATTAATGATCTTAC+GGG + chr2_1:67985514-67985533 Msa0219990:intron 25.0%
!! ACGGGTTAAAGATTATTTAT+TGG + chr2_1:67985532-67985551 Msa0219990:intron 25.0%
!! ACTCATGGAACTTATATTTT+TGG + chr2_1:67985832-67985851 Msa0219990:intron 25.0%
!! GGATGATTTTATGATTATGT+TGG + chr2_1:67985865-67985884 Msa0219990:intron 25.0%
!!! TTGAACATTACGCTTTATTT+TGG + chr2_1:67985914-67985933 Msa0219990:intron 25.0%
!!! AAGAACTCTATTGATTCTTT+TGG + chr2_1:67986367-67986386 Msa0219990:intron 25.0%
!! GATTTTTCACAAACACATTA+TGG - chr2_1:67986418-67986437 None:intergenic 25.0%
! AATCAAATATGTCTTCAACA+AGG - chr2_1:67986440-67986459 None:intergenic 25.0%
!! AATCAATTGATTCTTCTCTT+TGG + chr2_1:67986509-67986528 Msa0219990:intron 25.0%
!! CTCTATTTGTTCTTCTATTT+TGG + chr2_1:67986787-67986806 Msa0219990:intron 25.0%
! AGAGTTCCAATAATATCAAA+TGG - chr2_1:67987228-67987247 None:intergenic 25.0%
!! AATTTCTCTATTTGTTAGAG+AGG + chr2_1:67987301-67987320 Msa0219990:intron 25.0%
! ACAAACAAAACATTCACATT+TGG + chr2_1:67987429-67987448 Msa0219990:intron 25.0%
!!! GTGAAAACACTTTTTTTTGA+AGG - chr2_1:67988186-67988205 None:intergenic 25.0%
! AATGATTTATAAAGTGCAGA+TGG + chr2_1:67988262-67988281 Msa0219990:intron 25.0%
! TTCAAATAATCACCCTATAT+TGG + chr2_1:67988416-67988435 Msa0219990:CDS 25.0%
! TGTATGTTTCCATAAAAGAA+AGG - chr2_1:67988572-67988591 None:intergenic 25.0%
!! TTCTTTTATGGAAACATACA+TGG + chr2_1:67988572-67988591 Msa0219990:CDS 25.0%
!!! TATAGTGGAAGCTAAATTTT+CGG - chr2_1:67988781-67988800 None:intergenic 25.0%
!! TGAATTTTCATGTGATATAG+TGG - chr2_1:67988796-67988815 None:intergenic 25.0%
!! CATGAAAATTCAGTTTTTGA+TGG + chr2_1:67988804-67988823 Msa0219990:CDS 25.0%
! ATGAATAATGCATCCATAAA+AGG - chr2_1:67988840-67988859 None:intergenic 25.0%
!! TTTTATGGATGCATTATTCA+TGG + chr2_1:67988839-67988858 Msa0219990:CDS 25.0%
!!! TAGAAAGTGTCTATCATATA+TGG - chr2_1:67988894-67988913 None:intergenic 25.0%
!! TAAAACTCCTTCAAGTTTAT+TGG - chr2_1:67988919-67988938 None:intergenic 25.0%
!! AAGTAACATTTTCCATTGTA+AGG - chr2_1:67989163-67989182 None:intergenic 25.0%
!! AAAATTTTCATGTGATGTTG+TGG - chr2_1:67989186-67989205 None:intergenic 25.0%
!! TTTAATGGATGCATTATTCA+TGG + chr2_1:67989229-67989248 Msa0219990:CDS 25.0%
TCAATCCATTATTGTCACAA+GGG - chr2_1:67983801-67983820 None:intergenic 30.0%
!! GACAATAATGGATTGAGAAA+AGG + chr2_1:67983805-67983824 Msa0219990:five_prime_UTR 30.0%
AGTTGATTGCTTATGTTACT+AGG + chr2_1:67983854-67983873 Msa0219990:five_prime_UTR 30.0%
ATTGCTTATGTTACTAGGTA+TGG + chr2_1:67983859-67983878 Msa0219990:five_prime_UTR 30.0%
TATACGATACCTGCAAATTT+AGG - chr2_1:67983907-67983926 None:intergenic 30.0%
AACATACGACATTGAATGAT+TGG - chr2_1:67983999-67984018 None:intergenic 30.0%
AACAATTCTCTCGAGTTTAA+AGG - chr2_1:67984229-67984248 None:intergenic 30.0%
! AAGTTCCCTCTTTTGATATT+TGG - chr2_1:67984310-67984329 None:intergenic 30.0%
CATCAAACTTCATGAAAAAC+TGG + chr2_1:67984354-67984373 Msa0219990:CDS 30.0%
TTCATGAAAAACTGGGTAAT+AGG + chr2_1:67984362-67984381 Msa0219990:CDS 30.0%
AACATATCAACACTCTATCA+TGG + chr2_1:67984389-67984408 Msa0219990:intron 30.0%
TCATAAAAAATCCATGGGTT+AGG - chr2_1:67984415-67984434 None:intergenic 30.0%
TTTCTATATATGAAGGCAAG+AGG - chr2_1:67984492-67984511 None:intergenic 30.0%
! AATTATAGGTCTATTTTGCG+AGG - chr2_1:67984796-67984815 None:intergenic 30.0%
!!! TACAATTTTGTGTCGGTTTT+AGG - chr2_1:67984996-67985015 None:intergenic 30.0%
!!! GATTTTTTAAATTTTGGGGG+TGG + chr2_1:67985047-67985066 Msa0219990:intron 30.0%
! CTAAGTTTGTTTGTTCAAAG+TGG - chr2_1:67985124-67985143 None:intergenic 30.0%
!!! TTGCGTTTTTAAGTGTGAAT+CGG + chr2_1:67985236-67985255 Msa0219990:intron 30.0%
AAACTCGTTTACAGTGAAAT+CGG + chr2_1:67985263-67985282 Msa0219990:intron 30.0%
!!! CCGATTTCATTGATTTTGTT+GGG - chr2_1:67985314-67985333 None:intergenic 30.0%
CCCAACAAAATCAATGAAAT+CGG + chr2_1:67985311-67985330 Msa0219990:intron 30.0%
!!! TCCGATTTCATTGATTTTGT+TGG - chr2_1:67985315-67985334 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG - chr2_1:67985398-67985417 None:intergenic 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG - chr2_1:67985445-67985464 None:intergenic 30.0%
CAAAAAAAATGCAAGCAGAT+AGG - chr2_1:67985480-67985499 None:intergenic 30.0%
AACCCGTAAGATCATTAATA+TGG - chr2_1:67985519-67985538 None:intergenic 30.0%
!!! TTATAAAAGCGCCTTTTTTG+TGG + chr2_1:67985634-67985653 Msa0219990:intron 30.0%
GAAAAATTGGACCACAAAAA+AGG - chr2_1:67985648-67985667 None:intergenic 30.0%
TCGGAAAGAAGAAGAAAAAT+TGG - chr2_1:67985661-67985680 None:intergenic 30.0%
TCACAATAATGTGTTTGGTT+CGG - chr2_1:67985765-67985784 None:intergenic 30.0%
CCAATTCACAATAATGTGTT+TGG - chr2_1:67985770-67985789 None:intergenic 30.0%
CCAAACACATTATTGTGAAT+TGG + chr2_1:67985767-67985786 Msa0219990:intron 30.0%
GCTAACAATGATACAAATCA+AGG - chr2_1:67986156-67986175 None:intergenic 30.0%
TAAGATTGAGCTTATGCTAT+TGG + chr2_1:67986312-67986331 Msa0219990:intron 30.0%
ATTAACAAAGAGAGAAACCA+AGG - chr2_1:67986492-67986511 None:intergenic 30.0%
CTAATCTTTCTTCTCAATGT+TGG + chr2_1:67986546-67986565 Msa0219990:intron 30.0%
GATTAGATTTCTCACTTTAG+TGG + chr2_1:67986601-67986620 Msa0219990:intron 30.0%
!!! CTCACTTTAGTGGTTTTTTT+TGG + chr2_1:67986611-67986630 Msa0219990:intron 30.0%
TTGTAATAAGCTCAAAGCTT+TGG + chr2_1:67986989-67987008 Msa0219990:intron 30.0%
GAAAGTTTCACATATTAGAG+TGG - chr2_1:67987353-67987372 None:intergenic 30.0%
ACAAATAAATCTTGGCACTT+AGG - chr2_1:67987375-67987394 None:intergenic 30.0%
AACAAAACATTCACATTTGG+TGG + chr2_1:67987432-67987451 Msa0219990:intron 30.0%
AATTACTGTAAACCAGTTGA+TGG - chr2_1:67987494-67987513 None:intergenic 30.0%
CTTATATTCAAGACCAAAGA+AGG + chr2_1:67987693-67987712 Msa0219990:intron 30.0%
GAATAAGACAAGAAACTCAA+TGG + chr2_1:67987758-67987777 Msa0219990:intron 30.0%
GTGATTCTTTACCTCATTAT+CGG - chr2_1:67988319-67988338 None:intergenic 30.0%
ATAATGAGGTAAAGAATCAC+TGG + chr2_1:67988319-67988338 Msa0219990:CDS 30.0%
CTTTATAAAACGCTTCTTCA+AGG - chr2_1:67988352-67988371 None:intergenic 30.0%
AAGAATATTAAGTCTAAGCG+TGG + chr2_1:67988369-67988388 Msa0219990:CDS 30.0%
!! TATTGGCTTCTTCCAATATA+GGG - chr2_1:67988431-67988450 None:intergenic 30.0%
!! TTATTGGCTTCTTCCAATAT+AGG - chr2_1:67988432-67988451 None:intergenic 30.0%
GAAGAAGCCAATAAATTTGA+AGG + chr2_1:67988438-67988457 Msa0219990:CDS 30.0%
!! TGATAGTGACCTTTCTTTTA+TGG + chr2_1:67988560-67988579 Msa0219990:CDS 30.0%
ATAATGCATCCATAAAAGGA+AGG - chr2_1:67988836-67988855 None:intergenic 30.0%
TTCTATGCCAATAAACTTGA+AGG + chr2_1:67988909-67988928 Msa0219990:CDS 30.0%
TGGATTCTCATATGATATTG+TGG - chr2_1:67989030-67989049 None:intergenic 30.0%
! TGACAATGACCTTCATTTTA+TGG + chr2_1:67989058-67989077 Msa0219990:CDS 30.0%
TGAATGCATCCATAAAATGA+AGG - chr2_1:67989070-67989089 None:intergenic 30.0%
! TTTTATGGATGCATTCATAG+AGG + chr2_1:67989073-67989092 Msa0219990:CDS 30.0%
TGTGAACTGTCTATCATATA+AGG - chr2_1:67989125-67989144 None:intergenic 30.0%
TTTCCATTGTAAGGTGATTA+TGG - chr2_1:67989154-67989173 None:intergenic 30.0%
TGAAAATGACCTTGCTTTAA+TGG + chr2_1:67989214-67989233 Msa0219990:CDS 30.0%
ATAATGCATCCATTAAAGCA+AGG - chr2_1:67989226-67989245 None:intergenic 30.0%
CAATCCATTATTGTCACAAG+GGG - chr2_1:67983800-67983819 None:intergenic 35.0%
CTCAATCCATTATTGTCACA+AGG - chr2_1:67983802-67983821 None:intergenic 35.0%
! TGCAGGTATCGTATAAGAAA+AGG + chr2_1:67983912-67983931 Msa0219990:intron 35.0%
! GACATTGAATGATTGGTCAT+TGG - chr2_1:67983992-67984011 None:intergenic 35.0%
! AACTCGAGAGAATTGTTTTC+AGG + chr2_1:67984232-67984251 Msa0219990:intron 35.0%
! ACTCGAGAGAATTGTTTTCA+GGG + chr2_1:67984233-67984252 Msa0219990:intron 35.0%
!! AATTGTTTTCAGGGCTTGAA+AGG + chr2_1:67984242-67984261 Msa0219990:intron 35.0%
TGAGGCCAAATATCAAAAGA+GGG + chr2_1:67984302-67984321 Msa0219990:CDS 35.0%
AGGGAACTTTAATCAACAAG+AGG + chr2_1:67984321-67984340 Msa0219990:CDS 35.0%
! TTGTTGGCTGGTAACAATTT+CGG - chr2_1:67984574-67984593 None:intergenic 35.0%
! TTTCTTCCATTTTGCTACCA+TGG + chr2_1:67984611-67984630 Msa0219990:intron 35.0%
GGAGCTAGAAAAAAAAGCTA+GGG + chr2_1:67984732-67984751 Msa0219990:intron 35.0%
CTAGAAAAAAAAGCTAGGGT+GGG + chr2_1:67984736-67984755 Msa0219990:intron 35.0%
TACATCACTTTGCAGGAATT+TGG + chr2_1:67984959-67984978 Msa0219990:intron 35.0%
TTTCCCTCATAGCTATTGAA+TGG + chr2_1:67985149-67985168 Msa0219990:intron 35.0%
TCACCATTCAATAGCTATGA+GGG - chr2_1:67985155-67985174 None:intergenic 35.0%
AAATGAGCGGGAAAAAAATC+AGG - chr2_1:67985385-67985404 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG - chr2_1:67985397-67985416 None:intergenic 35.0%
CAAGCAGATAGGAATGAAAT+TGG - chr2_1:67985469-67985488 None:intergenic 35.0%
CACACGTTTAATGAGCTTAT+GGG - chr2_1:67985684-67985703 None:intergenic 35.0%
TCTATGGAAGATGAGTTGTT+TGG - chr2_1:67985728-67985747 None:intergenic 35.0%
GGTCGTTTAAGTGTAATCTA+TGG - chr2_1:67985744-67985763 None:intergenic 35.0%
!! AGAAAGCATTCCTAACGATA+TGG - chr2_1:67986208-67986227 None:intergenic 35.0%
TTGATGTTGGATCTATGTAG+CGG - chr2_1:67986240-67986259 None:intergenic 35.0%
!! TATATCAATGGGGTTGATGT+TGG - chr2_1:67986253-67986272 None:intergenic 35.0%
AACATCAACCCCATTGATAT+AGG + chr2_1:67986252-67986271 Msa0219990:intron 35.0%
TCGACTCAACCTATATCAAT+GGG - chr2_1:67986264-67986283 None:intergenic 35.0%
!! CTTTGTTGATTCTTCCCATT+TGG + chr2_1:67986881-67986900 Msa0219990:intron 35.0%
TAGAGAGAAATCAGCCAAAT+GGG - chr2_1:67986898-67986917 None:intergenic 35.0%
ATAGAGAGAAATCAGCCAAA+TGG - chr2_1:67986899-67986918 None:intergenic 35.0%
! ATTTGGCTGATTTCTCTCTA+TGG + chr2_1:67986898-67986917 Msa0219990:intron 35.0%
CTAATAGTGTAACCAACTAG+AGG - chr2_1:67986941-67986960 None:intergenic 35.0%
CTTAGGTGATCACATAAAGA+AGG - chr2_1:67987256-67987275 None:intergenic 35.0%
CTTCTTTATGTGATCACCTA+AGG + chr2_1:67987254-67987273 Msa0219990:intron 35.0%
GGTGAAATATGTCTAACCTT+AGG - chr2_1:67987273-67987292 None:intergenic 35.0%
AGTTTCACATATTAGAGTGG+TGG - chr2_1:67987350-67987369 None:intergenic 35.0%
!! ACCAAAGAAGGTATCTCTTT+AGG + chr2_1:67987705-67987724 Msa0219990:intron 35.0%
!! CCAAAGAAGGTATCTCTTTA+GGG + chr2_1:67987706-67987725 Msa0219990:intron 35.0%
AAGAAACTCAATGGATGAGA+TGG + chr2_1:67987767-67987786 Msa0219990:intron 35.0%
AGAAACTCAATGGATGAGAT+GGG + chr2_1:67987768-67987787 Msa0219990:intron 35.0%
! CGGTAAATTTGAAGCAATCA+CGG - chr2_1:67988289-67988308 None:intergenic 35.0%
CGTGATTGCTTCAAATTTAC+CGG + chr2_1:67988287-67988306 Msa0219990:CDS 35.0%
GTGATTGCTTCAAATTTACC+GGG + chr2_1:67988288-67988307 Msa0219990:CDS 35.0%
TGATTGCTTCAAATTTACCG+GGG + chr2_1:67988289-67988308 Msa0219990:CDS 35.0%
ATATTAAGTCTAAGCGTGGA+AGG + chr2_1:67988373-67988392 Msa0219990:CDS 35.0%
CGATTTGTCTTGCATAACAA+TGG + chr2_1:67988521-67988540 Msa0219990:CDS 35.0%
TCCATTGTAGGGTGATTATA+GGG - chr2_1:67988654-67988673 None:intergenic 35.0%
TTCCATTGTAGGGTGATTAT+AGG - chr2_1:67988655-67988674 None:intergenic 35.0%
TCTTGGTTTCTTCCATTGTA+GGG - chr2_1:67988665-67988684 None:intergenic 35.0%
TTCTTGGTTTCTTCCATTGT+AGG - chr2_1:67988666-67988685 None:intergenic 35.0%
GAAGAAACCAAGAAACTTGA+CGG + chr2_1:67988672-67988691 Msa0219990:CDS 35.0%
AAAAACTCCGTCAAGTTTCT+TGG - chr2_1:67988682-67988701 None:intergenic 35.0%
!! GACAATCGACTTGCAATATT+AGG - chr2_1:67988954-67988973 None:intergenic 35.0%
TGCATTCTCTTGCATAACAA+TGG + chr2_1:67988992-67989011 Msa0219990:CDS 35.0%
AGGTCATTGTCATCAAGAAT+TGG - chr2_1:67989050-67989069 None:intergenic 35.0%
AGGATTTGAGTGAGAATTTC+TGG + chr2_1:67989093-67989112 Msa0219990:CDS 35.0%
AATAGTGTAGCTTCTTCAGT+TGG - chr2_1:67989299-67989318 None:intergenic 35.0%
! CTGTGTACGATGTTGAATTT+TGG + chr2_1:67989351-67989370 Msa0219990:CDS 35.0%
AGAACCCCTTGTGACAATAA+TGG + chr2_1:67983793-67983812 Msa0219990:five_prime_UTR 40.0%
!! ATGGATTGAGAAAAGGCACT+TGG + chr2_1:67983812-67983831 Msa0219990:five_prime_UTR 40.0%
ATGTTACTAGGTATGGCTGT+TGG + chr2_1:67983866-67983885 Msa0219990:five_prime_UTR 40.0%
CGACAACTACCTAAATTTGC+AGG + chr2_1:67983895-67983914 Msa0219990:five_prime_UTR 40.0%
GAGAATTCTTTGCAGTATCC+TGG - chr2_1:67984122-67984141 None:intergenic 40.0%
TATGCGCTATCTCAGTATCT+TGG + chr2_1:67984195-67984214 Msa0219990:intron 40.0%
TAAGGTGGATGAACTATCTG+AGG + chr2_1:67984284-67984303 Msa0219990:exon 40.0%
CTGAGGCCAAATATCAAAAG+AGG + chr2_1:67984301-67984320 Msa0219990:CDS 40.0%
! TGTTGGCTGGTAACAATTTC+GGG - chr2_1:67984573-67984592 None:intergenic 40.0%
AGAGAGGCAATCTATGAGAA+TGG - chr2_1:67984641-67984660 None:intergenic 40.0%
CGGAGCTAGAAAAAAAAGCT+AGG + chr2_1:67984731-67984750 Msa0219990:intron 40.0%
GCTAGAAAAAAAAGCTAGGG+TGG + chr2_1:67984735-67984754 Msa0219990:intron 40.0%
TACATCACTTTGCGGGAATT+TGG + chr2_1:67984845-67984864 Msa0219990:intron 40.0%
ATTCCTGCAAAGTGATGTAG+TGG - chr2_1:67984958-67984977 None:intergenic 40.0%
GTCACCATTCAATAGCTATG+AGG - chr2_1:67985156-67985175 None:intergenic 40.0%
!!! CGTTTTTAAGTGTGAATCGG+TGG + chr2_1:67985239-67985258 Msa0219990:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG + chr2_1:67985393-67985412 Msa0219990:intron 40.0%
CGTTTAATGAGCTTATGGGT+CGG - chr2_1:67985680-67985699 None:intergenic 40.0%
CCACACGTTTAATGAGCTTA+TGG - chr2_1:67985685-67985704 None:intergenic 40.0%
CCATAAGCTCATTAAACGTG+TGG + chr2_1:67985682-67985701 Msa0219990:intron 40.0%
!! GGTCATGTGACTTGTTCTAT+TGG - chr2_1:67986184-67986203 None:intergenic 40.0%
AAGCATTCCTAACGATATGG+AGG - chr2_1:67986205-67986224 None:intergenic 40.0%
CGACTCAACCTATATCAATG+GGG - chr2_1:67986263-67986282 None:intergenic 40.0%
! GTCGACTCAACCTATATCAA+TGG - chr2_1:67986265-67986284 None:intergenic 40.0%
ACAAAGAGAGAAACCAAGGA+GGG - chr2_1:67986488-67986507 None:intergenic 40.0%
AACAAAGAGAGAAACCAAGG+AGG - chr2_1:67986489-67986508 None:intergenic 40.0%
TGATTTCTCTCTATGGCTGA+TGG + chr2_1:67986905-67986924 Msa0219990:intron 40.0%
TTGTTGCATCGTGAGTTTGA+AGG + chr2_1:67987092-67987111 Msa0219990:intron 40.0%
TGTTGCATCGTGAGTTTGAA+GGG + chr2_1:67987093-67987112 Msa0219990:intron 40.0%
ACTAACTTCTCACCATCAAC+TGG + chr2_1:67987479-67987498 Msa0219990:intron 40.0%
CCCTAAAGAGATACCTTCTT+TGG - chr2_1:67987709-67987728 None:intergenic 40.0%
!! GTATCTCTTTAGGGTTCGTT+TGG + chr2_1:67987715-67987734 Msa0219990:intron 40.0%
CCATTGTAGGGTGATTATAG+GGG - chr2_1:67988653-67988672 None:intergenic 40.0%
! TGGCAATGACCTTCCTTTTA+TGG + chr2_1:67988824-67988843 Msa0219990:CDS 40.0%
CAAGAGAATGCACTTGAAGA+TGG - chr2_1:67988984-67989003 None:intergenic 40.0%
CCATTGTAAGGTGATTATGG+AGG - chr2_1:67989151-67989170 None:intergenic 40.0%
CCTCCATAATCACCTTACAA+TGG + chr2_1:67989148-67989167 Msa0219990:CDS 40.0%
TTATTCATGGAGACTGTGAG+TGG + chr2_1:67988852-67988871 Msa0219990:CDS 40.0%
TATTCATGGAGACTGTGAGT+GGG + chr2_1:67988853-67988872 Msa0219990:CDS 40.0%
TATTCATGTTCACACTCTGC+AGG - chr2_1:67989323-67989342 None:intergenic 40.0%
GTTCTCACCATGGTCTCTAA+AGG - chr2_1:67983778-67983797 None:intergenic 45.0%
!! AAAAGGCACTTGGACTCATG+AGG + chr2_1:67983822-67983841 Msa0219990:five_prime_UTR 45.0%
CTAGGTATGGCTGTTGGAAT+TGG + chr2_1:67983872-67983891 Msa0219990:five_prime_UTR 45.0%
ACTTGTTCCAACAGAACTCC+AGG + chr2_1:67984101-67984120 Msa0219990:five_prime_UTR 45.0%
!! TTTTCAGGGCTTGAAAGGTG+TGG + chr2_1:67984247-67984266 Msa0219990:intron 45.0%
! TTTCAGGGCTTGAAAGGTGT+GGG + chr2_1:67984248-67984267 Msa0219990:intron 45.0%
!! GCTGGTAACAATTTCGGGTT+GGG - chr2_1:67984568-67984587 None:intergenic 45.0%
TCTATGAGAATGGCAAGCCA+TGG - chr2_1:67984631-67984650 None:intergenic 45.0%
CCACTGGTCAAGTGTACAAA+CGG - chr2_1:67984711-67984730 None:intergenic 45.0%
TTTGTACACTTGACCAGTGG+CGG + chr2_1:67984711-67984730 Msa0219990:intron 45.0%
!!! TTTTTTTCTAGCTCCGCCAC+TGG - chr2_1:67984727-67984746 None:intergenic 45.0%
ATTCCCGCAAAGTGATGTAG+TGG - chr2_1:67984844-67984863 None:intergenic 45.0%
CACATGACCTCCATATCGTT+AGG + chr2_1:67986195-67986214 Msa0219990:intron 45.0%
! TATAGGTTGAGTCGACGACT+TGG + chr2_1:67986269-67986288 Msa0219990:intron 45.0%
GGTATAAGTGCTCCTCTAGT+TGG + chr2_1:67986926-67986945 Msa0219990:intron 45.0%
!! TCTCTTTAGGGTTCGTTTGG+TGG + chr2_1:67987718-67987737 Msa0219990:intron 45.0%
CAAGACAAATCGCTTGAAGC+TGG - chr2_1:67988513-67988532 None:intergenic 45.0%
CCCCTATAATCACCCTACAA+TGG + chr2_1:67988650-67988669 Msa0219990:CDS 45.0%
TCTTCGCAACCATCTTCAAG+CGG + chr2_1:67988738-67988757 Msa0219990:CDS 45.0%
CAAGAGAATCCGCTTGAAGA+TGG - chr2_1:67988750-67988769 None:intergenic 45.0%
AGACTGTGAGTGGGAATGAT+TGG + chr2_1:67989252-67989271 Msa0219990:CDS 45.0%
GTGTAGCTTCTTCAGTTGGA+GGG - chr2_1:67989295-67989314 None:intergenic 45.0%
AGTGTAGCTTCTTCAGTTGG+AGG - chr2_1:67989296-67989315 None:intergenic 45.0%
!! AATTTAAATAATTCAATTAT+AGG - chr2_1:67984810-67984829 None:intergenic 5.0%
!!! ATTGAATTATTTAAATTTTT+CGG + chr2_1:67984813-67984832 Msa0219990:intron 5.0%
!!! ATTGAATTATTTAAAATTTT+CGG + chr2_1:67984927-67984946 Msa0219990:intron 5.0%
!! AAAAATCTAAATTAATTTAA+GGG - chr2_1:67987529-67987548 None:intergenic 5.0%
!!! AAAAATATCAAAAATTATTT+TGG - chr2_1:67987862-67987881 None:intergenic 5.0%
!!! AAATTATTTCATTAAATTTT+AGG - chr2_1:67987885-67987904 None:intergenic 5.0%
! CTACCAGCCTTTAGAGACCA+TGG + chr2_1:67983768-67983787 Msa0219990:five_prime_UTR 50.0%
! TCACCATGGTCTCTAAAGGC+TGG - chr2_1:67983774-67983793 None:intergenic 50.0%
GCAGTATCCTGGAGTTCTGT+TGG - chr2_1:67984111-67984130 None:intergenic 50.0%
GTGGGAAGAGCTGTAGACTA+AGG + chr2_1:67984266-67984285 Msa0219990:five_prime_UTR 50.0%
GGAAGAGCTGTAGACTAAGG+TGG + chr2_1:67984269-67984288 Msa0219990:five_prime_UTR 50.0%
CTCTATCATGGCCTAACCCA+TGG + chr2_1:67984401-67984420 Msa0219990:intron 50.0%
! GGCTGGTAACAATTTCGGGT+TGG - chr2_1:67984569-67984588 None:intergenic 50.0%
GGCAAGCCATGGTAGCAAAA+TGG - chr2_1:67984620-67984639 None:intergenic 50.0%
CCGTTTGTACACTTGACCAG+TGG + chr2_1:67984708-67984727 Msa0219990:intron 50.0%
TGGGCCACTACATCACTTTG+CGG + chr2_1:67984837-67984856 Msa0219990:intron 50.0%
GGACCACTACATCACTTTGC+AGG + chr2_1:67984952-67984971 Msa0219990:intron 50.0%
ATCGGAGCTTGCAGATTGAG+CGG + chr2_1:67985281-67985300 Msa0219990:intron 50.0%
AGAGAGAAACCAAGGAGGGA+GGG - chr2_1:67986484-67986503 None:intergenic 50.0%
AAGAGAGAAACCAAGGAGGG+AGG - chr2_1:67986485-67986504 None:intergenic 50.0%
!! GCTCAAAGCTTTGGCTTGAG+TGG + chr2_1:67986998-67987017 Msa0219990:intron 50.0%
!! ACCTCATTATCGGTTCTCCC+CGG - chr2_1:67988309-67988328 None:intergenic 50.0%
GTCACAAGGGGTTCTCACCA+TGG - chr2_1:67983788-67983807 None:intergenic 55.0%
GGGCCACTACATCACTTTGC+GGG + chr2_1:67984838-67984857 Msa0219990:intron 55.0%
!! TAAATTTTGGGGGTGGGCCG+TGG + chr2_1:67985054-67985073 Msa0219990:intron 55.0%
AGTGGGACTGTCAAGTGCAG+TGG - chr2_1:67985106-67985125 None:intergenic 55.0%
AGAAACCAAGGAGGGAGGGA+GGG - chr2_1:67986480-67986499 None:intergenic 55.0%
ACCGGGGAGAACCGATAATG+AGG + chr2_1:67988305-67988324 Msa0219990:CDS 55.0%
! AGCCCTTCATGGGCTGAGGT+GGG - chr2_1:67985080-67985099 None:intergenic 60.0%
GGGACTGTCAAGTGCAGTGG+CGG - chr2_1:67985103-67985122 None:intergenic 60.0%
AGAAAACCCGTGCGACGCAC+TGG + chr2_1:67985570-67985589 Msa0219990:intron 60.0%
TTTCGACCAGTGCGTCGCAC+GGG - chr2_1:67985579-67985598 None:intergenic 60.0%
CTTTCGACCAGTGCGTCGCA+CGG - chr2_1:67985580-67985599 None:intergenic 60.0%
GAGAAACCAAGGAGGGAGGG+AGG - chr2_1:67986481-67986500 None:intergenic 60.0%
! TCATGGGCTGAGGTGGGCCA+CGG - chr2_1:67985074-67985093 None:intergenic 65.0%
TGGCCCACCTCAGCCCATGA+AGG + chr2_1:67985074-67985093 Msa0219990:intron 65.0%
GGCCCACCTCAGCCCATGAA+GGG + chr2_1:67985075-67985094 Msa0219990:intron 65.0%
! GAGCCCTTCATGGGCTGAGG+TGG - chr2_1:67985081-67985100 None:intergenic 65.0%
! GCAGTGGCGGAGCCCTTCAT+GGG - chr2_1:67985090-67985109 None:intergenic 65.0%
! TGCAGTGGCGGAGCCCTTCA+TGG - chr2_1:67985091-67985110 None:intergenic 65.0%
TCTCTCCCTCCCTCCCTCCT+TGG + chr2_1:67986472-67986491 Msa0219990:intron 65.0%
! GCGGAGCCCTTCATGGGCTG+AGG - chr2_1:67985084-67985103 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 67983730 67989391 67983730 ID=Msa0219990;Name=Msa0219990
chr2_1 mRNA 67983730 67989391 67983730 ID=Msa0219990-mRNA-1;Parent=Msa0219990;Name=Msa0219990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=298|1|0.75|1|0.33|0.75|4|0|400
chr2_1 exon 67983730 67983916 67983730 ID=Msa0219990-mRNA-1:exon:19225;Parent=Msa0219990-mRNA-1
chr2_1 exon 67984098 67984170 67984098 ID=Msa0219990-mRNA-1:exon:19226;Parent=Msa0219990-mRNA-1
chr2_1 exon 67984254 67984383 67984254 ID=Msa0219990-mRNA-1:exon:19227;Parent=Msa0219990-mRNA-1
chr2_1 exon 67988281 67989391 67988281 ID=Msa0219990-mRNA-1:exon:19228;Parent=Msa0219990-mRNA-1
chr2_1 five_prime_UTR 67983730 67983916 67983730 ID=Msa0219990-mRNA-1:five_prime_utr;Parent=Msa0219990-mRNA-1
chr2_1 five_prime_UTR 67984098 67984170 67984098 ID=Msa0219990-mRNA-1:five_prime_utr;Parent=Msa0219990-mRNA-1
chr2_1 five_prime_UTR 67984254 67984291 67984254 ID=Msa0219990-mRNA-1:five_prime_utr;Parent=Msa0219990-mRNA-1
chr2_1 CDS 67984292 67984383 67984292 ID=Msa0219990-mRNA-1:cds;Parent=Msa0219990-mRNA-1
chr2_1 CDS 67988281 67989391 67988281 ID=Msa0219990-mRNA-1:cds;Parent=Msa0219990-mRNA-1
Gene Sequence

>Msa0219990

ATGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTTTAATCAACAAGAGGAAGATATTATCATCAAACTTCATGAAAAACTGGGTAATAGATGGACCGTGATTGCTTCAAATTTACCGGGGAGAACCGATAATGAGGTAAAGAATCACTGGCACACTACCTTGAAGAAGCGTTTTATAAAGAATATTAAGTCTAAGCGTGGAAGGAGAAAAGCCAAAGATTCAAATTCAAATAATCACCCTATATTGGAAGAAGCCAATAAATTTGAAGGAGTTTTAGAGAACAATGATCCTAATATTGCAAATCAAATATCTTCACAACCAGCTTCAAGCGATTTGTCTTGCATAACAATGGAAACTGCAATTTTTGATGATAGTGACCTTTCTTTTATGGAAACATACATGGACAATTTTAGTGAGAATTTTTGGACAGAGCCATATATGATAGACAATTCATATGTCCCCTATAATCACCCTACAATGGAAGAAACCAAGAAACTTGACGGAGTTTTTGAGAACAACATCGATGCCAATATTACGAGTTCACTATCTTCGCAACCATCTTCAAGCGGATTCTCTTGCATAACAACCGAAAATTTAGCTTCCACTATATCACATGAAAATTCAGTTTTTGATGGCAATGACCTTCCTTTTATGGATGCATTATTCATGGAGACTGTGAGTGAAAATTTTATGACTGAGCCATATATGATAGACACTTTCTATGCCAATAAACTTGAAGGAGTTTTAGAGAACAGTGATCCTAATATTGCAAGTCGATTGTCTTCACAACCATCTTCAAGTGCATTCTCTTGCATAACAATGGATACTGCATCTACCACAATATCATATGAGAATCCAATTCTTGATGACAATGACCTTCATTTTATGGATGCATTCATAGAGGATTTGAGTGAGAATTTCTGGTCAGAGCCTTATATGATAGACAGTTCACATGTCCTCCATAATCACCTTACAATGGAAAATGTTACTTCCACAACATCACATGAAAATTTTGTTCTTGATGAAAATGACCTTGCTTTAATGGATGCATTATTCATGGAGACTGTGAGTGGGAATGATTGGATAAACAGTTTTTATGTCCCTCCAACTGAAGAAGCTACACTATTTCCTGCAGAGTGTGAACATGAATACTTTAGTTCTGTGTACGATGTTGAATTTTGGAGCCATATTGCAGAATAA
Protein sequence

>Msa0219990

MNYLRPNIKRGNFNQQEEDIIIKLHEKLGNRWTVIASNLPGRTDNEVKNHWHTTLKKRFIKNIKSKRGRRKAKDSNSNNHPILEEANKFEGVLENNDPNIANQISSQPASSDLSCITMETAIFDDSDLSFMETYMDNFSENFWTEPYMIDNSYVPYNHPTMEETKKLDGVFENNIDANITSSLSSQPSSSGFSCITTENLASTISHENSVFDGNDLPFMDALFMETVSENFMTEPYMIDTFYANKLEGVLENSDPNIASRLSSQPSSSAFSCITMDTASTTISYENPILDDNDLHFMDAFIEDLSENFWSEPYMIDSSHVLHNHLTMENVTSTTSHENFVLDENDLALMDALFMETVSGNDWINSFYVPPTEEATLFPAECEHEYFSSVYDVEFWSHIAE*