AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0220020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220020 MtrunA17_Chr3g0082121 31.838 691 383 17 41 727 49 655 1.88e-101 328
Msa0220020 MtrunA17_Chr3g0088371 82.609 184 29 1 618 798 1 184 4.31e-101 310
Msa0220020 MtrunA17_Chr2g0324011 30.551 635 365 12 36 665 8 571 5.80e-101 324
Msa0220020 MtrunA17_Chr1g0202341 29.606 635 366 17 34 662 50 609 2.59e-79 269
Msa0220020 MtrunA17_Chr8g0363841 28.776 629 375 13 40 665 22 580 1.88e-74 255
Msa0220020 MtrunA17_Chr1g0203721 26.026 780 452 20 1 739 16 711 4.93e-73 256
Msa0220020 MtrunA17_Chr5g0448761 25.035 707 451 14 31 728 56 692 2.19e-68 241
Msa0220020 MtrunA17_Chr2g0296781 27.910 670 397 20 39 699 1 593 7.06e-68 239
Msa0220020 MtrunA17_Chr6g0458391 26.984 630 357 15 41 662 231 765 5.49e-65 231
Msa0220020 MtrunA17_Chr6g0477261 29.222 527 315 14 180 699 7 482 2.85e-64 227
Msa0220020 MtrunA17_Chr1g0164591 35.625 320 191 4 131 448 1 307 2.80e-63 215
Msa0220020 MtrunA17_Chr2g0287651 25.596 629 388 13 39 662 79 632 2.37e-60 219
Msa0220020 MtrunA17_Chr5g0441581 24.835 757 461 21 32 773 26 689 2.50e-59 214
Msa0220020 MtrunA17_Chr5g0440451 24.294 708 429 16 34 721 42 662 7.01e-56 207
Msa0220020 MtrunA17_Chr1g0207551 24.964 697 429 17 31 718 30 641 7.07e-55 203
Msa0220020 MtrunA17_Chr2g0329031 24.929 706 430 19 23 720 2 615 3.51e-54 200
Msa0220020 MtrunA17_Chr7g0258861 35.621 306 173 6 36 336 8 294 1.07e-53 188
Msa0220020 MtrunA17_Chr1g0172971 81.197 117 21 1 1 116 1 117 1.54e-53 194
Msa0220020 MtrunA17_Chr1g0198761 26.994 652 380 19 26 660 38 610 3.52e-53 197
Msa0220020 MtrunA17_Chr1g0196541 25.199 627 395 16 39 662 1 556 5.39e-53 196
Msa0220020 MtrunA17_Chr3g0118611 27.634 503 304 10 221 719 111 557 2.93e-52 195
Msa0220020 MtrunA17_Chr3g0080351 23.862 725 448 15 34 752 75 701 5.87e-50 189
Msa0220020 MtrunA17_Chr2g0290391 26.012 642 372 19 38 660 54 611 1.46e-47 180
Msa0220020 MtrunA17_Chr2g0287061 23.916 669 378 19 41 694 189 741 1.80e-47 181
Msa0220020 MtrunA17_Chr1g0203051 22.373 590 389 8 50 637 94 616 6.91e-47 177
Msa0220020 MtrunA17_Chr2g0276841 25.547 685 407 23 49 715 84 683 7.29e-46 175
Msa0220020 MtrunA17_Chr5g0448511 25.664 452 282 10 216 665 1 400 1.02e-43 166
Msa0220020 MtrunA17_Chr5g0431001 27.938 451 280 12 40 473 66 488 2.32e-42 161
Msa0220020 MtrunA17_Chr2g0291591 25.852 499 314 14 16 499 44 501 2.20e-41 160
Msa0220020 MtrunA17_Chr6g0475591 91.781 73 6 0 188 260 1 73 1.40e-40 143
Msa0220020 MtrunA17_Chr2g0291581 23.604 627 398 13 38 662 74 621 2.17e-40 159
Msa0220020 MtrunA17_Chr2g0294841 26.640 503 316 15 3 482 7 479 4.86e-36 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220020 AT4G38180.1 27.769 641 383 14 32 665 70 637 1.21e-69 245
Msa0220020 AT4G15090.1 24.827 721 448 16 50 753 66 709 1.76e-60 220
Msa0220020 AT4G15090.5 24.827 721 448 16 50 753 66 709 1.76e-60 220
Msa0220020 AT4G15090.3 24.827 721 448 16 50 753 66 709 1.76e-60 220
Msa0220020 AT4G15090.2 24.827 721 448 16 50 753 66 709 1.76e-60 220
Msa0220020 AT4G15090.4 24.827 721 448 16 50 753 66 709 1.76e-60 220
Msa0220020 AT2G27110.2 26.298 597 366 15 127 719 108 634 2.53e-53 199
Msa0220020 AT2G27110.1 26.298 597 366 15 127 719 108 634 2.53e-53 199
Msa0220020 AT2G27110.3 27.308 509 313 11 213 719 36 489 5.59e-53 196
Msa0220020 AT3G06250.2 24.961 633 352 16 34 661 189 703 2.47e-51 192
Msa0220020 AT3G06250.1 24.961 633 352 16 34 661 189 703 2.47e-51 192
Msa0220020 AT3G06250.3 24.961 633 352 16 34 661 189 703 2.47e-51 192
Msa0220020 AT1G76320.3 24.815 677 413 19 50 720 12 598 4.06e-51 191
Msa0220020 AT1G76320.1 24.815 677 413 19 50 720 12 598 1.82e-50 189
Msa0220020 AT1G76320.4 24.815 677 413 19 50 720 12 598 1.82e-50 189
Msa0220020 AT1G76320.2 24.815 677 413 19 50 720 12 598 2.43e-50 189
Msa0220020 AT3G22170.2 23.144 687 420 17 34 708 69 659 4.08e-49 187
Msa0220020 AT3G22170.1 23.144 687 420 17 34 708 69 659 4.08e-49 187
Msa0220020 AT5G18960.2 24.575 647 360 18 24 661 200 727 9.72e-46 176
Msa0220020 AT5G18960.1 24.575 647 360 18 24 661 200 727 9.72e-46 176
Msa0220020 AT4G38170.1 25.058 431 265 11 235 662 24 399 2.39e-43 166
Msa0220020 AT1G10240.2 24.880 623 376 19 49 659 62 604 8.68e-43 166
Msa0220020 AT1G10240.1 24.880 623 376 19 49 659 62 604 8.68e-43 166
Msa0220020 AT5G28530.1 24.100 639 388 17 40 660 60 619 7.96e-42 163
Msa0220020 AT5G28530.3 23.944 639 385 18 40 660 60 615 5.51e-41 160
Msa0220020 AT5G28530.2 23.944 639 385 18 40 660 60 615 5.51e-41 160
Msa0220020 AT2G32250.5 24.295 745 427 22 4 743 10 622 1.67e-40 160
Msa0220020 AT2G32250.2 24.161 745 428 21 4 743 10 622 3.89e-40 159
Msa0220020 AT2G32250.4 24.161 745 428 21 4 743 10 622 3.89e-40 159
Msa0220020 AT2G32250.6 24.161 745 428 21 4 743 10 622 4.22e-40 159
Msa0220020 AT2G32250.1 24.161 745 428 21 4 743 10 622 4.22e-40 159
Msa0220020 AT2G32250.3 24.161 745 428 21 4 743 10 622 4.22e-40 159
Msa0220020 AT2G32250.8 24.177 699 396 19 50 743 12 581 1.79e-39 157
Msa0220020 AT2G32250.7 24.320 699 395 20 50 743 12 581 1.88e-39 157
Msa0220020 AT1G80010.1 23.944 639 391 22 41 662 101 661 4.72e-36 146
Msa0220020 AT1G52520.1 22.311 623 408 15 41 662 91 638 3.44e-33 137
Msa0220020 AT4G19990.5 28.358 268 185 4 219 483 163 426 8.86e-27 117
Msa0220020 AT4G19990.5 35.338 133 72 3 591 721 495 615 1.15e-12 72.4
Msa0220020 AT4G19990.1 28.358 268 185 4 219 483 106 369 9.08e-27 117
Msa0220020 AT4G19990.1 35.338 133 72 3 591 721 438 558 1.03e-12 72.4
Msa0220020 AT4G19990.3 28.358 268 185 4 219 483 163 426 9.19e-27 117
Msa0220020 AT4G19990.3 35.338 133 72 3 591 721 495 615 1.10e-12 72.4
Msa0220020 AT4G19990.4 28.358 268 185 4 219 483 163 426 9.19e-27 117
Msa0220020 AT4G19990.4 35.338 133 72 3 591 721 495 615 1.10e-12 72.4
Msa0220020 AT4G19990.7 28.358 268 185 4 219 483 177 440 9.58e-27 117
Msa0220020 AT4G19990.7 35.338 133 72 3 591 721 509 629 1.18e-12 72.0
Msa0220020 AT4G19990.6 28.358 268 185 4 219 483 163 426 1.09e-26 117
Msa0220020 AT4G19990.6 35.338 133 72 3 591 721 495 615 1.01e-12 72.4
Msa0220020 AT4G19990.2 28.358 268 185 4 219 483 163 426 1.09e-26 117
Msa0220020 AT4G19990.2 35.338 133 72 3 591 721 495 615 1.01e-12 72.4
Msa0220020 AT5G28530.4 21.622 629 353 20 40 660 60 556 4.22e-22 102
Msa0220020 AT5G28530.5 21.463 629 350 21 40 660 60 552 2.62e-21 99.8

Find 126 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 2_1:+68029769 Msa0220020:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 2_1:+68029460 Msa0220020:CDS
CAACAAGATTATGCTCTATT+TGG 0.176342 2_1:+68028675 Msa0220020:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 2_1:-68030595 None:intergenic
TTCATTTCAGCTGTCTTTCT+TGG 0.205726 2_1:+68029179 Msa0220020:intron
CTTTAGTCATTTCAACATTA+TGG 0.212894 2_1:+68029727 Msa0220020:CDS
CATCGTAAGAGTGTGTTATT+TGG 0.276792 2_1:+68029212 Msa0220020:CDS
TATGGTTTGAGGTTTCTTAT+TGG 0.280533 2_1:-68029306 None:intergenic
TTCTTTGACCTAATTGGATT+TGG 0.299426 2_1:-68030589 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 2_1:+68029501 Msa0220020:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 2_1:+68030441 Msa0220020:CDS
ACCAGCCTGGTCTGTGTATA+TGG 0.341000 2_1:-68029324 None:intergenic
GCCGATATTTATTGTTTGTT+CGG 0.341758 2_1:-68028725 None:intergenic
TTGGTTTGAATATTATCTTC+TGG 0.345646 2_1:+68030838 Msa0220020:three_prime_UTR
GGTTTCGAATGTTGATGTTT+TGG 0.354913 2_1:+68030024 Msa0220020:CDS
TATGCATTGGTCTTCAGTTT+GGG 0.370760 2_1:+68029601 Msa0220020:CDS
AATTCTTGATTGTTATGTAT+TGG 0.372244 2_1:+68030819 Msa0220020:three_prime_UTR
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 2_1:+68030433 Msa0220020:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 2_1:+68028732 Msa0220020:CDS
ACCGAACAAACAATAAATAT+CGG 0.389395 2_1:+68028724 Msa0220020:CDS
TTTCAATTTATCATATCTAA+TGG 0.390380 2_1:+68027812 None:intergenic
GTATGCATTGGTCTTCAGTT+TGG 0.392120 2_1:+68029600 Msa0220020:CDS
GTCTTTAGTGCCAACATTCA+TGG 0.395146 2_1:-68030317 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 2_1:+68030581 Msa0220020:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.398856 2_1:-68030571 None:intergenic
TTCCTTCAAATACTATTATG+AGG 0.399583 2_1:+68029901 Msa0220020:CDS
TTCTCATACTCAACAAGAAC+TGG 0.403969 2_1:-68028195 None:intergenic
CCATGATTCTTTATCACTAA+AGG 0.406174 2_1:-68027956 None:intergenic
TTTGCTTCTTCCGAGCTATA+AGG 0.408288 2_1:-68030657 None:intergenic
TAAAGAATCATGGAAGTCTT+TGG 0.408500 2_1:+68027966 Msa0220020:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 2_1:+68030149 Msa0220020:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 2_1:-68030072 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 2_1:+68028037 Msa0220020:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 2_1:-68030073 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 2_1:+68028372 Msa0220020:CDS
GAGGAGTTTCTTATATCTAA+AGG 0.432555 2_1:+68030466 Msa0220020:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 2_1:+68028254 Msa0220020:CDS
GGGTTGTCACAGTCGACATT+AGG 0.433188 2_1:+68030107 Msa0220020:CDS
AAATGAAGTTCAAGGACAAC+TGG 0.438949 2_1:+68028380 Msa0220020:CDS
TGGTCTGTGTATATGGTTTG+AGG 0.447350 2_1:-68029317 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 2_1:+68028237 Msa0220020:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 2_1:-68030250 None:intergenic
CGTTATGCTTGTAACAAAGA+AGG 0.449439 2_1:+68028120 Msa0220020:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 2_1:+68027891 Msa0220020:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 2_1:+68029391 Msa0220020:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.457187 2_1:+68028402 Msa0220020:CDS
GGCCTACTTCGGACTTTAAG+TGG 0.458978 2_1:+68029555 Msa0220020:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 2_1:+68030150 Msa0220020:CDS
ACAAAATAAGAAATCGGATA+AGG 0.469178 2_1:+68028086 Msa0220020:CDS
GAAGTGATGGGTCAAGGAGT+TGG 0.484292 2_1:+68028447 Msa0220020:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 2_1:-68029903 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 2_1:-68028231 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 2_1:+68028024 Msa0220020:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 2_1:+68028515 Msa0220020:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 2_1:-68028342 None:intergenic
CAATTCACAAAATAAGAAAT+CGG 0.490263 2_1:+68028080 Msa0220020:CDS
TATGAGGAGGACACAACAAA+AGG 0.490908 2_1:+68029917 Msa0220020:CDS
CTGTCTATGAACCATCTGTT+GGG 0.491412 2_1:+68030542 Msa0220020:CDS
ATCAGATTTCGACTACAATT+GGG 0.491708 2_1:+68029502 Msa0220020:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 2_1:+68028528 Msa0220020:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 2_1:-68029821 None:intergenic
GAGAACATCTTATGAAGTGA+TGG 0.499875 2_1:+68028434 Msa0220020:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 2_1:-68028620 None:intergenic
AAATGCTCTGGTTTATGTAA+TGG 0.504865 2_1:-68028330 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 2_1:+68029588 Msa0220020:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 2_1:+68030086 Msa0220020:CDS
TTTAAGTCCGAAAATCGAAA+AGG 0.508080 2_1:-68028486 None:intergenic
GAGGGATAATCATGCTGAGT+TGG 0.508852 2_1:+68029760 Msa0220020:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 2_1:+68029606 Msa0220020:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 2_1:+68028290 Msa0220020:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 2_1:-68030066 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 2_1:-68029709 None:intergenic
ACGTGTTTGCGCAGCTGCGG+AGG 0.526838 2_1:+68030396 Msa0220020:CDS
TCATAATCGACTTGATGAAA+GGG 0.526860 2_1:+68030087 Msa0220020:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 2_1:-68029898 None:intergenic
ACATTATGGTACAGAGAATG+AGG 0.530421 2_1:+68029741 Msa0220020:CDS
TAACAAAGAAGGTTTCAAGA+AGG 0.538422 2_1:+68028131 Msa0220020:CDS
AATCGAACAAGTGAATGGTC+TGG 0.540971 2_1:-68029704 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 2_1:+68029918 Msa0220020:CDS
CCTTTAGTGATAAAGAATCA+TGG 0.543522 2_1:+68027956 Msa0220020:CDS
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 2_1:+68028132 Msa0220020:CDS
GACAGAAACTCCTTATAGCT+CGG 0.545691 2_1:+68030647 Msa0220020:CDS
ACTTCAACAACGCACCAGCC+TGG 0.557139 2_1:-68029337 None:intergenic
CTGAAATCCACCATGAATGT+TGG 0.557140 2_1:+68030307 Msa0220020:CDS
AATGAAGCTCTCTCGAAACC+AGG 0.565261 2_1:+68028582 Msa0220020:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 2_1:+68027915 Msa0220020:CDS
GCTGTCTATGAACCATCTGT+TGG 0.568181 2_1:+68030541 Msa0220020:CDS
GTGATGGGTCAAGGAGTTGG+AGG 0.568802 2_1:+68028450 Msa0220020:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 2_1:+68028289 Msa0220020:CDS
TACACGTGTTTGCGCAGCTG+CGG 0.572360 2_1:+68030393 Msa0220020:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 2_1:-68029822 None:intergenic
TTTGGTGCAGTCCCAACAGA+TGG 0.581566 2_1:-68030553 None:intergenic
GAAGCAAAAGAAAGATGATG+AGG 0.585686 2_1:+68030672 Msa0220020:CDS
TGGTGTATACTTGTTTACTA+CGG 0.585960 2_1:-68029843 None:intergenic
ATATTAACTTCATCTGAGAG+TGG 0.588105 2_1:+68027880 Msa0220020:CDS
TCTTATGAAGTGATGGGTCA+AGG 0.589029 2_1:+68028441 Msa0220020:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 2_1:+68030434 Msa0220020:CDS
ACCATATACACAGACCAGGC+TGG 0.590176 2_1:+68029323 Msa0220020:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 2_1:+68030429 Msa0220020:CDS
ATAAGTTAGGAAAGATGATG+AGG 0.591839 2_1:+68030734 Msa0220020:three_prime_UTR
AGTTCTTGTTGAGTATGAGA+AGG 0.594413 2_1:+68028197 Msa0220020:CDS
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 2_1:+68030056 Msa0220020:CDS
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 2_1:-68030509 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 2_1:+68028521 Msa0220020:CDS
GAGGCTTTAACAATTTAAGC+GGG 0.600751 2_1:+68030691 Msa0220020:exon
TTGATATCGTTGTGCTTGAG+TGG 0.601464 2_1:-68030341 None:intergenic
AGAACATCTTATGAAGTGAT+GGG 0.601988 2_1:+68028435 Msa0220020:CDS
AACTCGTCAAAAGGAGATGG+TGG 0.603142 2_1:+68028524 Msa0220020:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 2_1:+68029819 Msa0220020:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 2_1:+68029904 Msa0220020:CDS
AGAACTGGACTGTCACATGT+TGG 0.620791 2_1:-68028180 None:intergenic
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 2_1:-68029557 None:intergenic
GGGTCAAGGAGTTGGAGGCA+CGG 0.621882 2_1:+68028455 Msa0220020:CDS
TGAGGCTTTAACAATTTAAG+CGG 0.627823 2_1:+68030690 Msa0220020:exon
ATTATGATCTTCAAACCTTG+GGG 0.630358 2_1:-68030071 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 2_1:+68029392 Msa0220020:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 2_1:-68030314 None:intergenic
GATTTCAGCTTATCGACAGA+CGG 0.644926 2_1:-68030292 None:intergenic
CATTATGGTACAGAGAATGA+GGG 0.650096 2_1:+68029742 Msa0220020:CDS
TGAATAAATGAAAAGCAAGA+TGG 0.655697 2_1:-68029863 None:intergenic
GCATCTGAAATATTTCTCAA+CGG 0.661104 2_1:+68030418 Msa0220020:CDS
CATGTCGACATAAGAAACCC+CGG 0.663279 2_1:-68030168 None:intergenic
TCAAACCATATACACAGACC+AGG 0.671057 2_1:+68029319 Msa0220020:CDS
TGTCGTATGTTTGAGAACCG+GGG 0.673760 2_1:+68030151 Msa0220020:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 2_1:+68030002 Msa0220020:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 2_1:+68030003 Msa0220020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATGTTATAAGTT+AGG + chr2_1:68030721-68030740 Msa0220020:three_prime_UTR 10.0%
!! TTTAATTATGCATATAACAC+TGG + chr2_1:68028024-68028043 Msa0220020:CDS 20.0%
!! CAATTCACAAAATAAGAAAT+CGG + chr2_1:68028080-68028099 Msa0220020:CDS 20.0%
!! ATGTCTATAAGATATATAAG+TGG + chr2_1:68028289-68028308 Msa0220020:CDS 20.0%
!! TGTCTATAAGATATATAAGT+GGG + chr2_1:68028290-68028309 Msa0220020:CDS 20.0%
!!! TGAATGTTTATATTGATTGA+AGG + chr2_1:68028879-68028898 Msa0220020:intron 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG + chr2_1:68028907-68028926 Msa0220020:intron 20.0%
!!! ATGATGAAAAACTGTTTTAA+TGG + chr2_1:68029530-68029549 Msa0220020:CDS 20.0%
!! AATTCTTGATTGTTATGTAT+TGG + chr2_1:68030819-68030838 Msa0220020:three_prime_UTR 20.0%
! TGAAAATTCAGTTATTGATG+CGG + chr2_1:68027915-68027934 Msa0220020:CDS 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG - chr2_1:68028076-68028095 None:intergenic 25.0%
! ACAAAATAAGAAATCGGATA+AGG + chr2_1:68028086-68028105 Msa0220020:CDS 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG + chr2_1:68028402-68028421 Msa0220020:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG + chr2_1:68028724-68028743 Msa0220020:CDS 25.0%
! AGTACAAAATACTAACCTAA+TGG - chr2_1:68028750-68028769 None:intergenic 25.0%
! TGAAATTTGAATGAATGTTC+TGG + chr2_1:68028797-68028816 Msa0220020:intron 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG + chr2_1:68028899-68028918 Msa0220020:intron 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG + chr2_1:68028906-68028925 Msa0220020:intron 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG + chr2_1:68029156-68029175 Msa0220020:intron 25.0%
! AAAACACCTTGAAAAACATT+CGG - chr2_1:68029368-68029387 None:intergenic 25.0%
! TTTCGATGAGTTAACTAATT+TGG + chr2_1:68029460-68029479 Msa0220020:CDS 25.0%
!!! TGAAAAACTGTTTTAATGGA+AGG + chr2_1:68029534-68029553 Msa0220020:CDS 25.0%
! CTTTAGTCATTTCAACATTA+TGG + chr2_1:68029727-68029746 Msa0220020:CDS 25.0%
! TGAATAAATGAAAAGCAAGA+TGG - chr2_1:68029866-68029885 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG - chr2_1:68029901-68029920 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG + chr2_1:68029901-68029920 Msa0220020:CDS 25.0%
!!! ATGTTGATAATGATAATGAG+AGG + chr2_1:68030002-68030021 Msa0220020:CDS 25.0%
!!! TGTTGATAATGATAATGAGA+GGG + chr2_1:68030003-68030022 Msa0220020:CDS 25.0%
ATATTAACTTCATCTGAGAG+TGG + chr2_1:68027880-68027899 Msa0220020:CDS 30.0%
CCATGATTCTTTATCACTAA+AGG - chr2_1:68027959-68027978 None:intergenic 30.0%
CCTTTAGTGATAAAGAATCA+TGG + chr2_1:68027956-68027975 Msa0220020:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG + chr2_1:68027966-68027985 Msa0220020:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG + chr2_1:68028131-68028150 Msa0220020:CDS 30.0%
AACAAAGAAGGTTTCAAGAA+GGG + chr2_1:68028132-68028151 Msa0220020:CDS 30.0%
TAAAGAAAAACCAGAGGAAA+GGG + chr2_1:68028221-68028240 Msa0220020:CDS 30.0%
! AGCTGGAATATATTTGAAGT+TGG + chr2_1:68028254-68028273 Msa0220020:CDS 30.0%
! AAATGCTCTGGTTTATGTAA+TGG - chr2_1:68028333-68028352 None:intergenic 30.0%
AGAACATCTTATGAAGTGAT+GGG + chr2_1:68028435-68028454 Msa0220020:CDS 30.0%
! GAATCTTCCTTTTCGATTTT+CGG + chr2_1:68028479-68028498 Msa0220020:CDS 30.0%
TTTAAGTCCGAAAATCGAAA+AGG - chr2_1:68028489-68028508 None:intergenic 30.0%
TGGATATCATAGTAAAAACC+TGG - chr2_1:68028603-68028622 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG + chr2_1:68028637-68028656 Msa0220020:CDS 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG + chr2_1:68028638-68028657 Msa0220020:CDS 30.0%
CAACAAGATTATGCTCTATT+TGG + chr2_1:68028675-68028694 Msa0220020:CDS 30.0%
GCCGATATTTATTGTTTGTT+CGG - chr2_1:68028728-68028747 None:intergenic 30.0%
AACAATAAATATCGGCCATT+AGG + chr2_1:68028732-68028751 Msa0220020:CDS 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG + chr2_1:68028811-68028830 Msa0220020:intron 30.0%
CTGGTATATGTGTGTTAATT+TGG + chr2_1:68028836-68028855 Msa0220020:intron 30.0%
TGTACAGAACATAAATTCCA+AGG - chr2_1:68028946-68028965 None:intergenic 30.0%
AAACACATATGATCTTTCCA+TGG - chr2_1:68028970-68028989 None:intergenic 30.0%
TTTCTATTTACACAGCACAA+TGG + chr2_1:68029115-68029134 Msa0220020:intron 30.0%
! TATGGTTTGAGGTTTCTTAT+TGG - chr2_1:68029309-68029328 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG + chr2_1:68029359-68029378 Msa0220020:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG + chr2_1:68029371-68029390 Msa0220020:CDS 30.0%
GAGAATGCAAAGAAAAATCT+CGG + chr2_1:68029416-68029435 Msa0220020:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG + chr2_1:68029501-68029520 Msa0220020:CDS 30.0%
ATCAGATTTCGACTACAATT+GGG + chr2_1:68029502-68029521 Msa0220020:CDS 30.0%
TAAAGAATCGAACAAGTGAA+TGG - chr2_1:68029712-68029731 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG - chr2_1:68029846-68029865 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG - chr2_1:68029906-68029925 None:intergenic 30.0%
CTTCAAATACTATTATGAGG+AGG + chr2_1:68029904-68029923 Msa0220020:CDS 30.0%
! CAAAGTTTTCACAATTGAGA+AGG + chr2_1:68029961-68029980 Msa0220020:CDS 30.0%
ATTATGATCTTCAAACCTTG+GGG - chr2_1:68030074-68030093 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG - chr2_1:68030075-68030094 None:intergenic 30.0%
!! ATCATAATCGACTTGATGAA+AGG + chr2_1:68030086-68030105 Msa0220020:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG + chr2_1:68030087-68030106 Msa0220020:CDS 30.0%
!! TCGACATGTTTTCAAGATTT+TGG + chr2_1:68030183-68030202 Msa0220020:CDS 30.0%
!! ACATGTTTTCAAGATTTTGG+AGG + chr2_1:68030186-68030205 Msa0220020:CDS 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG + chr2_1:68030251-68030270 Msa0220020:CDS 30.0%
! GCATCTGAAATATTTCTCAA+CGG + chr2_1:68030418-68030437 Msa0220020:CDS 30.0%
GAGGAGTTTCTTATATCTAA+AGG + chr2_1:68030466-68030485 Msa0220020:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG - chr2_1:68030574-68030593 None:intergenic 30.0%
AAGAAAGACCAAATCCAATT+AGG + chr2_1:68030581-68030600 Msa0220020:CDS 30.0%
TTCTTTGACCTAATTGGATT+TGG - chr2_1:68030592-68030611 None:intergenic 30.0%
! TGAGGCTTTAACAATTTAAG+CGG + chr2_1:68030690-68030709 Msa0220020:exon 30.0%
ATAAGTTAGGAAAGATGATG+AGG + chr2_1:68030734-68030753 Msa0220020:three_prime_UTR 30.0%
! TGAGGCTTTAACTAAAAAAG+CGG + chr2_1:68030752-68030771 Msa0220020:three_prime_UTR 30.0%
!!! GTGTTTGTTGCTGTTTTCAA+TGG + chr2_1:68027852-68027871 Msa0220020:exon 35.0%
ATAACACTGGATTCTCTGTT+AGG + chr2_1:68028037-68028056 Msa0220020:CDS 35.0%
CGTTATGCTTGTAACAAAGA+AGG + chr2_1:68028120-68028139 Msa0220020:CDS 35.0%
GTCTGCTTAATCCTAAAAAC+AGG + chr2_1:68028157-68028176 Msa0220020:CDS 35.0%
TTCTCATACTCAACAAGAAC+TGG - chr2_1:68028198-68028217 None:intergenic 35.0%
AGTTCTTGTTGAGTATGAGA+AGG + chr2_1:68028197-68028216 Msa0220020:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG + chr2_1:68028220-68028239 Msa0220020:CDS 35.0%
CGAGAAGTAAATGAAGTTCA+AGG + chr2_1:68028372-68028391 Msa0220020:CDS 35.0%
AAATGAAGTTCAAGGACAAC+TGG + chr2_1:68028380-68028399 Msa0220020:CDS 35.0%
GAGAACATCTTATGAAGTGA+TGG + chr2_1:68028434-68028453 Msa0220020:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG + chr2_1:68028515-68028534 Msa0220020:CDS 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG + chr2_1:68028817-68028836 Msa0220020:intron 35.0%
CATAAATTCCAAGGCAAGAT+AGG - chr2_1:68028937-68028956 None:intergenic 35.0%
ATTTATGTTCTGTACAGCCA+TGG + chr2_1:68028950-68028969 Msa0220020:intron 35.0%
TTCATTTCAGCTGTCTTTCT+TGG + chr2_1:68029179-68029198 Msa0220020:intron 35.0%
! CATCGTAAGAGTGTGTTATT+TGG + chr2_1:68029212-68029231 Msa0220020:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG + chr2_1:68029255-68029274 Msa0220020:CDS 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG + chr2_1:68029384-68029403 Msa0220020:CDS 35.0%
! TTTTAATGGAAGGCCTACTT+CGG + chr2_1:68029544-68029563 Msa0220020:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG + chr2_1:68029588-68029607 Msa0220020:CDS 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG + chr2_1:68029601-68029620 Msa0220020:CDS 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG + chr2_1:68029671-68029690 Msa0220020:CDS 35.0%
ACATTATGGTACAGAGAATG+AGG + chr2_1:68029741-68029760 Msa0220020:CDS 35.0%
CATTATGGTACAGAGAATGA+GGG + chr2_1:68029742-68029761 Msa0220020:CDS 35.0%
! GGTTTCGAATGTTGATGTTT+TGG + chr2_1:68030024-68030043 Msa0220020:CDS 35.0%
CGATTATGATCTTCAAACCT+TGG - chr2_1:68030076-68030095 None:intergenic 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG + chr2_1:68030193-68030212 Msa0220020:CDS 35.0%
!! CGCTTTAAAACATATTGTGC+AGG - chr2_1:68030253-68030272 None:intergenic 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG + chr2_1:68030254-68030273 Msa0220020:CDS 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG - chr2_1:68030520-68030539 None:intergenic 35.0%
GAAGCAAAAGAAAGATGATG+AGG + chr2_1:68030672-68030691 Msa0220020:CDS 35.0%
! GAGGCTTTAACAATTTAAGC+GGG + chr2_1:68030691-68030710 Msa0220020:exon 35.0%
ATCTGAGAGTGGACAATTGA+CGG + chr2_1:68027891-68027910 Msa0220020:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG - chr2_1:68028171-68028190 None:intergenic 40.0%
GAAGGCTAAAGAAAAACCAG+AGG + chr2_1:68028215-68028234 Msa0220020:CDS 40.0%
!! TCTTATGAAGTGATGGGTCA+AGG + chr2_1:68028441-68028460 Msa0220020:CDS 40.0%
TCCATCTGCCCAAAAAATAC+TGG - chr2_1:68028649-68028668 None:intergenic 40.0%
TCCAGCTATGCAAAGATCAT+AGG + chr2_1:68029061-68029080 Msa0220020:intron 40.0%
ACCTATGATCTTTGCATAGC+TGG - chr2_1:68029065-68029084 None:intergenic 40.0%
TGGTCTGTGTATATGGTTTG+AGG - chr2_1:68029320-68029339 None:intergenic 40.0%
TCAAACCATATACACAGACC+AGG + chr2_1:68029319-68029338 Msa0220020:CDS 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG + chr2_1:68029600-68029619 Msa0220020:CDS 40.0%
AATCGAACAAGTGAATGGTC+TGG - chr2_1:68029707-68029726 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG + chr2_1:68029769-68029788 Msa0220020:CDS 40.0%
TATGAGGAGGACACAACAAA+AGG + chr2_1:68029917-68029936 Msa0220020:CDS 40.0%
ATGAGGAGGACACAACAAAA+GGG + chr2_1:68029918-68029937 Msa0220020:CDS 40.0%
TTGAAGAAAACCTTTCCCCA+AGG + chr2_1:68030056-68030075 Msa0220020:CDS 40.0%
CATGTCGTATGTTTGAGAAC+CGG + chr2_1:68030149-68030168 Msa0220020:CDS 40.0%
ATGTCGTATGTTTGAGAACC+GGG + chr2_1:68030150-68030169 Msa0220020:CDS 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG + chr2_1:68030196-68030215 Msa0220020:CDS 40.0%
GATTTCAGCTTATCGACAGA+CGG - chr2_1:68030295-68030314 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG + chr2_1:68030307-68030326 Msa0220020:CDS 40.0%
TTTAGTGCCAACATTCATGG+TGG - chr2_1:68030317-68030336 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG - chr2_1:68030320-68030339 None:intergenic 40.0%
TTGATATCGTTGTGCTTGAG+TGG - chr2_1:68030344-68030363 None:intergenic 40.0%
ATTTCTCAACGGTGTTCTTG+AGG + chr2_1:68030429-68030448 Msa0220020:CDS 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG - chr2_1:68030512-68030531 None:intergenic 40.0%
CTGTCTATGAACCATCTGTT+GGG + chr2_1:68030542-68030561 Msa0220020:CDS 40.0%
AGTCGCTTCTTTGACCTAAT+TGG - chr2_1:68030598-68030617 None:intergenic 40.0%
GACAGAAACTCCTTATAGCT+CGG + chr2_1:68030647-68030666 Msa0220020:CDS 40.0%
TTTGCTTCTTCCGAGCTATA+AGG - chr2_1:68030660-68030679 None:intergenic 40.0%
AGAACTGGACTGTCACATGT+TGG - chr2_1:68028183-68028202 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG + chr2_1:68028225-68028244 Msa0220020:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG - chr2_1:68028234-68028253 None:intergenic 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG + chr2_1:68028237-68028256 Msa0220020:CDS 45.0%
CTCAAGTAGCACAAATGCTC+TGG - chr2_1:68028345-68028364 None:intergenic 45.0%
GACAACTCGTCAAAAGGAGA+TGG + chr2_1:68028521-68028540 Msa0220020:CDS 45.0%
AACTCGTCAAAAGGAGATGG+TGG + chr2_1:68028524-68028543 Msa0220020:CDS 45.0%
AATGAAGCTCTCTCGAAACC+AGG + chr2_1:68028582-68028601 Msa0220020:CDS 45.0%
TGTCTTCTGCAGCATCAACT+TGG - chr2_1:68028623-68028642 None:intergenic 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG + chr2_1:68028645-68028664 Msa0220020:CDS 45.0%
AGCCACTTAAAGTCCGAAGT+AGG - chr2_1:68029560-68029579 None:intergenic 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG + chr2_1:68029606-68029625 Msa0220020:CDS 45.0%
! GTGAGGTCACATTTTACAGC+TGG + chr2_1:68029623-68029642 Msa0220020:CDS 45.0%
GAGGGATAATCATGCTGAGT+TGG + chr2_1:68029760-68029779 Msa0220020:CDS 45.0%
ATCCCAACAGTCAGCTTATG+CGG + chr2_1:68029819-68029838 Msa0220020:CDS 45.0%
GATCTTCAAACCTTGGGGAA+AGG - chr2_1:68030069-68030088 None:intergenic 45.0%
TGTCGTATGTTTGAGAACCG+GGG + chr2_1:68030151-68030170 Msa0220020:CDS 45.0%
CATGTCGACATAAGAAACCC+CGG - chr2_1:68030171-68030190 None:intergenic 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG + chr2_1:68030441-68030460 Msa0220020:CDS 45.0%
GCTGTCTATGAACCATCTGT+TGG + chr2_1:68030541-68030560 Msa0220020:CDS 45.0%
!! GAAGTGATGGGTCAAGGAGT+TGG + chr2_1:68028447-68028466 Msa0220020:CDS 50.0%
TGGGTGATCCTATCTTGCCT+TGG + chr2_1:68028926-68028945 Msa0220020:intron 50.0%
ACCATATACACAGACCAGGC+TGG + chr2_1:68029323-68029342 Msa0220020:CDS 50.0%
ACCAGCCTGGTCTGTGTATA+TGG - chr2_1:68029327-68029346 None:intergenic 50.0%
TGGTCTTTGCTCATGGCACA+TGG + chr2_1:68029391-68029410 Msa0220020:CDS 50.0%
GGTCTTTGCTCATGGCACAT+GGG + chr2_1:68029392-68029411 Msa0220020:CDS 50.0%
GGCCTACTTCGGACTTTAAG+TGG + chr2_1:68029555-68029574 Msa0220020:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG - chr2_1:68029824-68029843 None:intergenic 50.0%
GGGTTGTCACAGTCGACATT+AGG + chr2_1:68030107-68030126 Msa0220020:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG + chr2_1:68030434-68030453 Msa0220020:CDS 50.0%
! TTTGGTGCAGTCCCAACAGA+TGG - chr2_1:68030556-68030575 None:intergenic 50.0%
!! GTGATGGGTCAAGGAGTTGG+AGG + chr2_1:68028450-68028469 Msa0220020:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG + chr2_1:68028528-68028547 Msa0220020:CDS 55.0%
ACTTCAACAACGCACCAGCC+TGG - chr2_1:68029340-68029359 None:intergenic 55.0%
GGACCGCATAAGCTGACTGT+TGG - chr2_1:68029825-68029844 None:intergenic 55.0%
TACACGTGTTTGCGCAGCTG+CGG + chr2_1:68030393-68030412 Msa0220020:CDS 55.0%
CTCAACGGTGTTCTTGAGGC+AGG + chr2_1:68030433-68030452 Msa0220020:CDS 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG + chr2_1:68030447-68030466 Msa0220020:CDS 55.0%
GGGTCAAGGAGTTGGAGGCA+CGG + chr2_1:68028455-68028474 Msa0220020:CDS 60.0%
ACGTGTTTGCGCAGCTGCGG+AGG + chr2_1:68030396-68030415 Msa0220020:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 68027826 68030860 68027826 ID=Msa0220020;Name=Msa0220020
chr2_1 mRNA 68027826 68030860 68027826 ID=Msa0220020-mRNA-1;Parent=Msa0220020;Name=Msa0220020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=45|1|1|1|1|1|2|152|800
chr2_1 exon 68027826 68028753 68027826 ID=Msa0220020-mRNA-1:exon:19252;Parent=Msa0220020-mRNA-1
chr2_1 exon 68029189 68030860 68029189 ID=Msa0220020-mRNA-1:exon:19253;Parent=Msa0220020-mRNA-1
chr2_1 five_prime_UTR 68027826 68027870 68027826 ID=Msa0220020-mRNA-1:five_prime_utr;Parent=Msa0220020-mRNA-1
chr2_1 CDS 68027871 68028753 68027871 ID=Msa0220020-mRNA-1:cds;Parent=Msa0220020-mRNA-1
chr2_1 CDS 68029189 68030708 68029189 ID=Msa0220020-mRNA-1:cds;Parent=Msa0220020-mRNA-1
chr2_1 three_prime_UTR 68030709 68030860 68030709 ID=Msa0220020-mRNA-1:three_prime_utr;Parent=Msa0220020-mRNA-1
Gene Sequence

>Msa0220020

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAGTTCTCAATGTTACTCCTTTAGTGATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCGGATAAGGTACATTATGTGCGTTATGCTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAGGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTGGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGTGATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAGCTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGAGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGCTGTCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAACCATATACACAGACCAGGCTGGTGCGTTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTGTTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACTCAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTACAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGAATTGAACAAGTTCTTCAAAGTTTTCACAATTGAGAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTAGGAGTAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACATGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGCTGCGGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGAGTTTCTTATATCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGCTGTCTATGAACCATCTGTTGGGACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTAGAGCAAGACAGAAACTCCTTATAGCTCGGAAGAAGCAAAAGAAAGATGATGAGGCTTTAACAATTTAA
Protein sequence

>Msa0220020

MDLILTSSESGQLTVENSVIDADSSQCYSFSDKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYACNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTTRQKEMVAGEATVIQEFFRNEALSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAVFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQTIYTDQAGALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNCFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELNKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIRSKSFTCSCRMFENRGFLCRHVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNVGTKDTTQAQRYQQICAVTVQLSTRVCAAAEASEIFLNGVLEAGKKAEEFLISKGIHTDRSSVTPSKSSKAVAVYEPSVGTAPKFKERPNPIRSKKRLKSDYEKARARQKLLIARKKQKKDDEALTI*