Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220150 | RHN51853.1 | 32.184 | 174 | 69 | 2 | 9 | 182 | 9 | 133 | 3.69e-16 | 93.2 |
| Msa0220150 | RHN51853.1 | 37.423 | 163 | 89 | 1 | 34 | 183 | 222 | 384 | 4.65e-20 | 105 |
| Msa0220150 | RHN51853.1 | 43.682 | 277 | 142 | 2 | 203 | 466 | 225 | 500 | 1.27e-74 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220150 | A0A396HGY8 | 32.184 | 174 | 69 | 2 | 9 | 182 | 9 | 133 | 1.76e-16 | 93.2 |
| Msa0220150 | A0A396HGY8 | 37.423 | 163 | 89 | 1 | 34 | 183 | 222 | 384 | 2.22e-20 | 105 |
| Msa0220150 | A0A396HGY8 | 43.682 | 277 | 142 | 2 | 203 | 466 | 225 | 500 | 6.06e-75 | 253 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0220150 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220150 | MtrunA17_Chr6g0473661 | 43.682 | 277 | 142 | 2 | 203 | 466 | 225 | 500 | 1.17e-78 | 253 |
| Msa0220150 | MtrunA17_Chr6g0473661 | 37.423 | 163 | 89 | 1 | 34 | 183 | 222 | 384 | 4.27e-24 | 105 |
| Msa0220150 | MtrunA17_Chr6g0473661 | 32.184 | 174 | 69 | 2 | 9 | 182 | 9 | 133 | 3.40e-20 | 93.2 |
| Msa0220150 | MtrunA17_Chr6g0473651 | 49.640 | 139 | 69 | 1 | 212 | 350 | 216 | 353 | 1.47e-36 | 139 |
| Msa0220150 | MtrunA17_Chr6g0473651 | 44.531 | 128 | 71 | 0 | 56 | 183 | 226 | 353 | 2.04e-24 | 104 |
| Msa0220150 | MtrunA17_Chr6g0473651 | 31.214 | 173 | 108 | 3 | 279 | 443 | 23 | 192 | 3.18e-23 | 101 |
| Msa0220150 | MtrunA17_Chr6g0473651 | 47.887 | 71 | 37 | 0 | 112 | 182 | 22 | 92 | 8.05e-13 | 70.1 |
| Msa0220150 | MtrunA17_Chr6g0473921 | 36.957 | 138 | 87 | 0 | 328 | 465 | 1 | 138 | 8.28e-32 | 119 |
| Msa0220150 | MtrunA17_Chr1g0156191 | 37.500 | 136 | 84 | 1 | 294 | 429 | 1 | 135 | 1.55e-27 | 107 |
| Msa0220150 | MtrunA17_Chr1g0206471 | 29.767 | 215 | 139 | 2 | 207 | 410 | 38 | 251 | 1.38e-26 | 108 |
| Msa0220150 | MtrunA17_Chr1g0206471 | 29.139 | 151 | 95 | 1 | 43 | 181 | 40 | 190 | 1.33e-17 | 82.8 |
| Msa0220150 | MtrunA17_Chr7g0270401 | 27.711 | 249 | 163 | 5 | 195 | 429 | 24 | 269 | 2.77e-24 | 102 |
| Msa0220150 | MtrunA17_Chr7g0270401 | 27.273 | 154 | 100 | 1 | 43 | 184 | 39 | 192 | 2.60e-16 | 79.0 |
| Msa0220150 | MtrunA17_Chr6g0462511 | 35.398 | 113 | 72 | 1 | 319 | 430 | 2 | 114 | 1.68e-20 | 87.0 |
| Msa0220150 | MtrunA17_Chr1g0193281 | 31.298 | 131 | 90 | 0 | 43 | 173 | 39 | 169 | 6.62e-16 | 76.3 |
| Msa0220150 | MtrunA17_Chr1g0193281 | 31.250 | 128 | 83 | 2 | 187 | 310 | 14 | 140 | 4.84e-11 | 62.0 |
| Msa0220150 | MtrunA17_Chr1g0207921 | 40.000 | 80 | 46 | 1 | 43 | 120 | 36 | 115 | 8.22e-13 | 67.4 |
| Msa0220150 | MtrunA17_Chr4g0054601 | 41.892 | 74 | 43 | 0 | 234 | 307 | 1 | 74 | 3.44e-12 | 63.2 |
| Msa0220150 | MtrunA17_Chr7g0228461 | 31.667 | 120 | 78 | 2 | 58 | 176 | 2 | 118 | 2.71e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 117 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCTGTGGCAAGGATTTC+TGG | 0.139608 | 2_1:-68338318 | None:intergenic |
| AAACTGGACCGTCGTGATTT+TGG | 0.142859 | 2_1:+68336618 | Msa0220150:CDS |
| CAATCCAGCCTTGTTTCTTA+TGG | 0.243933 | 2_1:-68338035 | None:intergenic |
| CGGTCCAGTTTGGATATTAT+TGG | 0.264347 | 2_1:-68336606 | None:intergenic |
| ATCCATGGGTGCAGTGTATT+GGG | 0.290852 | 2_1:-68338543 | None:intergenic |
| CTCATCATTGCCATCTCACT+TGG | 0.320277 | 2_1:-68336172 | None:intergenic |
| CCGAGGTTCATTACTTCATC+AGG | 0.337428 | 2_1:+68338097 | Msa0220150:CDS |
| GATATATCGGATAATGGATA+TGG | 0.364913 | 2_1:-68338064 | None:intergenic |
| CCTACCACACTTACGATTGT+TGG | 0.366401 | 2_1:+68338340 | Msa0220150:CDS |
| ACCTCTGCGATGTGCAAATC+AGG | 0.368835 | 2_1:-68338447 | None:intergenic |
| ATCGTCAAGGTCATAAGATT+TGG | 0.374229 | 2_1:-68336537 | None:intergenic |
| ACATCGCAGAGGTTGGTTGC+AGG | 0.375369 | 2_1:+68338457 | Msa0220150:CDS |
| ACAACAATGATATTGTTGTT+TGG | 0.386359 | 2_1:-68337884 | None:intergenic |
| ACCTCAATCTCATTGTTCAT+TGG | 0.386489 | 2_1:-68336405 | None:intergenic |
| GATATTTATAACATTGTAGA+TGG | 0.391221 | 2_1:+68337965 | Msa0220150:CDS |
| GACTTCGTCTGATGTCCTCT+CGG | 0.399084 | 2_1:+68338165 | Msa0220150:CDS |
| TATCCATGGGTGCAGTGTAT+TGG | 0.399336 | 2_1:-68338544 | None:intergenic |
| ACTTCAGACAAGGCTGGTCT+AGG | 0.399428 | 2_1:+68337936 | Msa0220150:CDS |
| GCAAGGGATATATCGGATAA+TGG | 0.403725 | 2_1:-68338070 | None:intergenic |
| AAAATCACGACGGTCCAGTT+TGG | 0.405460 | 2_1:-68336616 | None:intergenic |
| ATGCTATGATTGGTGGTGAT+TGG | 0.409098 | 2_1:+68338422 | Msa0220150:CDS |
| TACTCCAATAATATCCAAAC+TGG | 0.412151 | 2_1:+68336602 | Msa0220150:CDS |
| GGATGTTAACTCAGGATGTT+TGG | 0.412783 | 2_1:+68336692 | Msa0220150:CDS |
| CATAAGAAACAAGGCTGGAT+TGG | 0.419848 | 2_1:+68338036 | Msa0220150:CDS |
| AACCAGACTTTGCCGTGGTA+TGG | 0.440028 | 2_1:+68338289 | Msa0220150:intron |
| CACTATTGAATTGACTTACT+CGG | 0.440432 | 2_1:+68336671 | Msa0220150:CDS |
| AAACCTATGGTCAGCGGCAG+TGG | 0.455398 | 2_1:+68338574 | Msa0220150:CDS |
| CGGCAACGCAAGGGATATAT+CGG | 0.461190 | 2_1:-68338077 | None:intergenic |
| CAGACATAGTGTCAAATTCA+AGG | 0.463743 | 2_1:-68336204 | None:intergenic |
| GACAAAGATAACACAGTCCT+TGG | 0.465488 | 2_1:+68338508 | Msa0220150:CDS |
| TCATCATTGCCATCTCACTT+GGG | 0.476104 | 2_1:-68336171 | None:intergenic |
| CTGTGCGAAGGGACCTGTCT+CGG | 0.479542 | 2_1:+68337279 | Msa0220150:CDS |
| TAGGTTTCACATAGTATCCA+TGG | 0.490660 | 2_1:-68338558 | None:intergenic |
| ATGGTCATGAGTAGTAGATT+AGG | 0.500878 | 2_1:-68338016 | None:intergenic |
| TGGGTCTATCTGAAATATGC+GGG | 0.502250 | 2_1:+68337992 | Msa0220150:CDS |
| TTGGTCCGAACGGCTGTACA+TGG | 0.502745 | 2_1:+68338359 | Msa0220150:CDS |
| CATCTCACCATGTCTGACTT+AGG | 0.502842 | 2_1:+68335294 | None:intergenic |
| GAAGGGACCTGTCTCGGTTG+AGG | 0.505460 | 2_1:+68337285 | Msa0220150:CDS |
| GACTTCTACAACATTGAGCT+TGG | 0.507615 | 2_1:+68336486 | Msa0220150:CDS |
| TCACCACCAATCATAGCATA+AGG | 0.511917 | 2_1:-68338418 | None:intergenic |
| ACTTCGTCTGATGTCCTCTC+GGG | 0.511997 | 2_1:+68338166 | Msa0220150:CDS |
| CATCTCCATGTACAGCCGTT+CGG | 0.512529 | 2_1:-68338364 | None:intergenic |
| GAGTATGCTGGAACAGATGT+CGG | 0.514049 | 2_1:+68338645 | Msa0220150:CDS |
| AATATGCCTTATGCTATGAT+TGG | 0.515256 | 2_1:+68338412 | Msa0220150:CDS |
| TCCAATGAACAATGAGATTG+AGG | 0.518221 | 2_1:+68336404 | Msa0220150:CDS |
| AGCTTTATATGAGGAAAGGT+TGG | 0.518511 | 2_1:+68336451 | Msa0220150:CDS |
| GATAAGTCCTCAACCGAGAC+AGG | 0.525131 | 2_1:-68337292 | None:intergenic |
| CGACCACTGCCGCTGACCAT+AGG | 0.527761 | 2_1:-68338577 | None:intergenic |
| ACCCCAATACACTGCACCCA+TGG | 0.533195 | 2_1:+68338541 | Msa0220150:CDS |
| TGCACAAGGAATGCTGTCAT+TGG | 0.536531 | 2_1:+68335350 | Msa0220150:CDS |
| CAGTGGTCGATATGTGTACC+AGG | 0.539166 | 2_1:+68338591 | Msa0220150:CDS |
| ATTATTGGAGTAGTGTGAGC+AGG | 0.541688 | 2_1:-68336591 | None:intergenic |
| TAATGAACCTCGGCAACGCA+AGG | 0.541750 | 2_1:-68338087 | None:intergenic |
| TGATGTCCTCTCGGGCACTT+TGG | 0.543138 | 2_1:+68338174 | Msa0220150:CDS |
| TTGCAAGGCGAAGAGTATGC+TGG | 0.545573 | 2_1:+68338633 | Msa0220150:CDS |
| ATAACATTGTAGATGGTGCA+TGG | 0.547247 | 2_1:+68337972 | Msa0220150:CDS |
| CGAGGTTCATTACTTCATCA+GGG | 0.547766 | 2_1:+68338098 | Msa0220150:CDS |
| TCACCATGTCTGACTTAGGT+GGG | 0.551890 | 2_1:+68335298 | None:intergenic |
| CATATTATTTGCAACAGCGA+AGG | 0.553325 | 2_1:-68338395 | None:intergenic |
| CTTCAGACAAGGCTGGTCTA+GGG | 0.553757 | 2_1:+68337937 | Msa0220150:CDS |
| CAAGGAATGCTGTCATTGGC+AGG | 0.555729 | 2_1:+68335354 | Msa0220150:CDS |
| AGTATGCTGGAACAGATGTC+GGG | 0.557360 | 2_1:+68338646 | Msa0220150:CDS |
| CTTACGATTGTTGGTCCGAA+CGG | 0.558198 | 2_1:+68338349 | Msa0220150:CDS |
| TATATGAGGAAAGGTTGGTA+TGG | 0.559929 | 2_1:+68336456 | Msa0220150:CDS |
| GATTTGCACATCGCAGAGGT+TGG | 0.560790 | 2_1:+68338450 | Msa0220150:CDS |
| GGACTGTGTTATCTTTGTCA+TGG | 0.561082 | 2_1:-68338504 | None:intergenic |
| TGGATACTATGTGAAACCTA+TGG | 0.563204 | 2_1:+68338561 | Msa0220150:CDS |
| TGCAGTGTATTGGGGTATGT+CGG | 0.565836 | 2_1:-68338534 | None:intergenic |
| ATATATCCCTTGCGTTGCCG+AGG | 0.568869 | 2_1:+68338080 | Msa0220150:CDS |
| TGTGGTAGGTTTCTGTGGCA+AGG | 0.569531 | 2_1:-68338326 | None:intergenic |
| GACAAGCTTTATATGAGGAA+AGG | 0.570103 | 2_1:+68336447 | Msa0220150:CDS |
| ATCTCACTTGGGGTATACGT+TGG | 0.570410 | 2_1:-68336160 | None:intergenic |
| TAACATTGTAGATGGTGCAT+GGG | 0.570614 | 2_1:+68337973 | Msa0220150:CDS |
| CTCACCATGTCTGACTTAGG+TGG | 0.572352 | 2_1:+68335297 | None:intergenic |
| ACTTACTCGGATGTTAACTC+AGG | 0.572912 | 2_1:+68336684 | Msa0220150:CDS |
| GAAAGGTTGGTATGGACTGA+AGG | 0.575278 | 2_1:+68336464 | Msa0220150:CDS |
| GAGGCGACAAGCTTTATATG+AGG | 0.576586 | 2_1:+68336442 | Msa0220150:CDS |
| ACAAGGCTGGTCTAGGGTGA+AGG | 0.576887 | 2_1:+68337943 | Msa0220150:CDS |
| CATCATTGCCATCTCACTTG+GGG | 0.579124 | 2_1:-68336170 | None:intergenic |
| AACGTATACCCCAAGTGAGA+TGG | 0.579805 | 2_1:+68336162 | Msa0220150:CDS |
| AAATCTGTTGTTGATCGTCA+AGG | 0.579813 | 2_1:-68336550 | None:intergenic |
| ACAACATTGAGCTTGGTGCA+TGG | 0.580204 | 2_1:+68336493 | Msa0220150:CDS |
| CCAACAATCGTAAGTGTGGT+AGG | 0.580385 | 2_1:-68338340 | None:intergenic |
| CGAGACAGGTCCCTTCGCAC+AGG | 0.583465 | 2_1:-68337278 | None:intergenic |
| AGGTCTACTTCAGACAAGGC+TGG | 0.585540 | 2_1:+68337930 | Msa0220150:CDS |
| TCACTATCTCAAATATTGCA+AGG | 0.596203 | 2_1:+68338618 | Msa0220150:CDS |
| ATGACCATAAGAAACAAGGC+TGG | 0.597597 | 2_1:+68338031 | Msa0220150:CDS |
| CGACCTCGATCCTGTGCGAA+GGG | 0.601460 | 2_1:+68337268 | Msa0220150:CDS |
| ATGCCTTATGCTATGATTGG+TGG | 0.601798 | 2_1:+68338415 | Msa0220150:CDS |
| TTGGGGTATGTCGGAAACCA+AGG | 0.606539 | 2_1:-68338525 | None:intergenic |
| AATGAACCTCGGCAACGCAA+GGG | 0.607154 | 2_1:-68338086 | None:intergenic |
| AACGCTTTGGATGCTGCACA+AGG | 0.608033 | 2_1:+68335336 | Msa0220150:CDS |
| GTAAGTGTGGTAGGTTTCTG+TGG | 0.617237 | 2_1:-68338331 | None:intergenic |
| AGGTTTCACATAGTATCCAT+GGG | 0.622147 | 2_1:-68338557 | None:intergenic |
| CAACAGCGAACTTAACTGCA+TGG | 0.624703 | 2_1:-68338480 | None:intergenic |
| TCCATGGGTGCAGTGTATTG+GGG | 0.627336 | 2_1:-68338542 | None:intergenic |
| ACCTGATTTGCACATCGCAG+AGG | 0.634639 | 2_1:+68338446 | Msa0220150:CDS |
| AGGATGTTTGGTATTCACTG+TGG | 0.635952 | 2_1:+68336704 | Msa0220150:CDS |
| ATGGGTCTATCTGAAATATG+CGG | 0.636801 | 2_1:+68337991 | Msa0220150:CDS |
| ACGACCTCGATCCTGTGCGA+AGG | 0.639634 | 2_1:+68337267 | Msa0220150:CDS |
| GGTCCCTTCGCACAGGATCG+AGG | 0.647508 | 2_1:-68337271 | None:intergenic |
| TTCTGGCAGAAGCCATACCA+CGG | 0.648051 | 2_1:-68338301 | None:intergenic |
| GGCAAGGTCTACTTCAGACA+AGG | 0.649008 | 2_1:+68337926 | Msa0220150:CDS |
| CCTGATGAAGTAATGAACCT+CGG | 0.649312 | 2_1:-68338097 | None:intergenic |
| TTATTTAGCAGTTAAAGGCG+AGG | 0.655685 | 2_1:+68337798 | Msa0220150:intron |
| GAGGTTCATTACTTCATCAG+GGG | 0.659487 | 2_1:+68338099 | Msa0220150:CDS |
| CAAGTGAGATGGCAATGATG+AGG | 0.660753 | 2_1:+68336173 | Msa0220150:CDS |
| ACTCATGACCATAAGAAACA+AGG | 0.663177 | 2_1:+68338027 | Msa0220150:CDS |
| TCAAAATCTTGACAGATGTG+CGG | 0.663839 | 2_1:-68338144 | None:intergenic |
| CGGACCAACAATCGTAAGTG+TGG | 0.667344 | 2_1:-68338344 | None:intergenic |
| ATTTGAGATAGTGATTGACC+TGG | 0.673697 | 2_1:-68338609 | None:intergenic |
| GGGTCTATCTGAAATATGCG+GGG | 0.673953 | 2_1:+68337993 | Msa0220150:CDS |
| TATATACCAAAGTGCCCGAG+AGG | 0.678235 | 2_1:-68338180 | None:intergenic |
| TGTTTAACCAGACTTTGCCG+TGG | 0.679547 | 2_1:+68338284 | Msa0220150:intron |
| AAACCCACCTAAGTCAGACA+TGG | 0.685362 | 2_1:-68335301 | None:intergenic |
| TATGTGAAACCTATGGTCAG+CGG | 0.713139 | 2_1:+68338568 | Msa0220150:CDS |
| GAGGTTCGACTGTATCGCAG+AGG | 0.730544 | 2_1:+68336423 | Msa0220150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGCATAATATAAAATATAAA+TGG | + | chr2_1:68335909-68335928 | Msa0220150:intron | 10.0% |
| !!! | TTATTTTGATTTTTAATGCA+TGG | + | chr2_1:68335586-68335605 | Msa0220150:intron | 15.0% |
| !! | AAAAGATTGAAAAAAACATT+TGG | - | chr2_1:68335978-68335997 | None:intergenic | 15.0% |
| !! | AAAAAACCATATAAATTCAT+TGG | - | chr2_1:68337231-68337250 | None:intergenic | 15.0% |
| !! | TACATTCTAATTTGAATATA+TGG | + | chr2_1:68337471-68337490 | Msa0220150:intron | 15.0% |
| !!! | TATGTTAACATTTTCTATTA+TGG | + | chr2_1:68337746-68337765 | Msa0220150:intron | 15.0% |
| !! | GGTTAATATAATTAGATATT+TGG | + | chr2_1:68338216-68338235 | Msa0220150:intron | 15.0% |
| !! | TTATGAGGAAAAAAAATCTA+TGG | + | chr2_1:68335435-68335454 | Msa0220150:intron | 20.0% |
| !! | GTATCTTAAGAATACAAAAT+TGG | - | chr2_1:68335690-68335709 | None:intergenic | 20.0% |
| !! | TACATGTTTACTCTTTATTA+TGG | + | chr2_1:68335707-68335726 | Msa0220150:intron | 20.0% |
| !!! | TTTAGGACAAAAAATATCTA+GGG | + | chr2_1:68335733-68335752 | Msa0220150:intron | 20.0% |
| !! | AGAAATAAACAATAACACAA+CGG | - | chr2_1:68336744-68336763 | None:intergenic | 20.0% |
| !!! | AACTAACGTACAAATTTTTT+CGG | - | chr2_1:68337636-68337655 | None:intergenic | 20.0% |
| !! | ATGTTAACATAAATTTATGC+CGG | - | chr2_1:68337737-68337756 | None:intergenic | 20.0% |
| !! | GATATTTATAACATTGTAGA+TGG | + | chr2_1:68337965-68337984 | Msa0220150:CDS | 20.0% |
| ! | AACATATTGTTAACATGCTA+AGG | - | chr2_1:68335527-68335546 | None:intergenic | 25.0% |
| ! | AAATAATGATATGCAACACA+GGG | - | chr2_1:68335572-68335591 | None:intergenic | 25.0% |
| ! | AAAATAATGATATGCAACAC+AGG | - | chr2_1:68335573-68335592 | None:intergenic | 25.0% |
| !!! | CTAGATATTTTTTGTCCTAA+AGG | - | chr2_1:68335734-68335753 | None:intergenic | 25.0% |
| !!! | CTTTAGGACAAAAAATATCT+AGG | + | chr2_1:68335732-68335751 | Msa0220150:intron | 25.0% |
| !!! | AACTTGTTATAAACATGCAA+AGG | - | chr2_1:68335946-68335965 | None:intergenic | 25.0% |
| ! | TTAGCATCAAACACATTTAT+TGG | - | chr2_1:68336289-68336308 | None:intergenic | 25.0% |
| ! | TTTCTGTTTGTGTTTAGTAA+CGG | + | chr2_1:68336773-68336792 | Msa0220150:intron | 25.0% |
| !! | TATATGTTGTTTATTCTGTC+CGG | + | chr2_1:68337185-68337204 | Msa0220150:intron | 25.0% |
| !! | AAATTTTCACGACAACAATA+AGG | + | chr2_1:68337444-68337463 | Msa0220150:intron | 25.0% |
| ! | GTTTCCTATCTAATATCATA+AGG | + | chr2_1:68337768-68337787 | Msa0220150:intron | 25.0% |
| !! | ACAACAATGATATTGTTGTT+TGG | - | chr2_1:68337887-68337906 | None:intergenic | 25.0% |
| !! | GGTATATAATTTGCACTAAT+TGG | + | chr2_1:68338195-68338214 | Msa0220150:intron | 25.0% |
| ! | ATTTCGTTCATTCGATTATA+AGG | + | chr2_1:68338241-68338260 | Msa0220150:intron | 25.0% |
| ACTCTTTATTATGGTCCTTT+AGG | + | chr2_1:68335716-68335735 | Msa0220150:intron | 30.0% | |
| ATCAAACATAACGATATCAG+AGG | - | chr2_1:68335883-68335902 | None:intergenic | 30.0% | |
| ! | CAATATTAGGAGGCATAAAA+GGG | - | chr2_1:68336045-68336064 | None:intergenic | 30.0% |
| ! | ACAATATTAGGAGGCATAAA+AGG | - | chr2_1:68336046-68336065 | None:intergenic | 30.0% |
| TATGTCCTCATCTATTAGAA+TGG | - | chr2_1:68336259-68336278 | None:intergenic | 30.0% | |
| ! | TGTTAATTTTCGTAGGGAAT+GGG | + | chr2_1:68336315-68336334 | Msa0220150:intron | 30.0% |
| TAGTCTTTCAAAAAGCAGTT+AGG | - | chr2_1:68336348-68336367 | None:intergenic | 30.0% | |
| !!! | AACTGCTTTTTGAAAGACTA+TGG | + | chr2_1:68336348-68336367 | Msa0220150:CDS | 30.0% |
| TACTCCAATAATATCCAAAC+TGG | + | chr2_1:68336602-68336621 | Msa0220150:CDS | 30.0% | |
| ! | CACTATTGAATTGACTTACT+CGG | + | chr2_1:68336671-68336690 | Msa0220150:CDS | 30.0% |
| ATCAAATCTGCATTTGTAGA+CGG | - | chr2_1:68337078-68337097 | None:intergenic | 30.0% | |
| ACAAATGCAGATTTGATTAG+AGG | + | chr2_1:68337081-68337100 | Msa0220150:intron | 30.0% | |
| ACAACATATACTTCAGTTCA+GGG | - | chr2_1:68337175-68337194 | None:intergenic | 30.0% | |
| AACAACATATACTTCAGTTC+AGG | - | chr2_1:68337176-68337195 | None:intergenic | 30.0% | |
| ACGAATAACAATCAAATTGC+CGG | - | chr2_1:68337207-68337226 | None:intergenic | 30.0% | |
| TTCGTGCCAATGAATTTATA+TGG | + | chr2_1:68337222-68337241 | Msa0220150:intron | 30.0% | |
| ! | AACAAAACTTGGTGGTTAAA+AGG | - | chr2_1:68337399-68337418 | None:intergenic | 30.0% |
| TCTATTACTCTCTACAAATC+CGG | - | chr2_1:68337529-68337548 | None:intergenic | 30.0% | |
| AGTTATCATAAACTCTGTCT+AGG | + | chr2_1:68337593-68337612 | Msa0220150:intron | 30.0% | |
| !!! | ATTTGTACGTTAGTTTTGTG+CGG | + | chr2_1:68337641-68337660 | Msa0220150:intron | 30.0% |
| CAGATATACTTTCTTATGTC+CGG | + | chr2_1:68337715-68337734 | Msa0220150:intron | 30.0% | |
| CACACCTTATGATATTAGAT+AGG | - | chr2_1:68337775-68337794 | None:intergenic | 30.0% | |
| ! | TGTCCTTATTTAGCAGTTAA+AGG | + | chr2_1:68337793-68337812 | Msa0220150:intron | 30.0% |
| ! | ACTTCTTTTGCAAAACATGA+AGG | - | chr2_1:68337827-68337846 | None:intergenic | 30.0% |
| ! | TCATGTTTTGCAAAAGAAGT+AGG | + | chr2_1:68337827-68337846 | Msa0220150:CDS | 30.0% |
| GTTGAAGTTCAGAAAAAGAA+TGG | + | chr2_1:68337905-68337924 | Msa0220150:CDS | 30.0% | |
| !! | GATATATCGGATAATGGATA+TGG | - | chr2_1:68338067-68338086 | None:intergenic | 30.0% |
| AAGGTTATCTTACTGTTTGT+TGG | + | chr2_1:68338260-68338279 | Msa0220150:intron | 30.0% | |
| AATATGCCTTATGCTATGAT+TGG | + | chr2_1:68338412-68338431 | Msa0220150:CDS | 30.0% | |
| TCACTATCTCAAATATTGCA+AGG | + | chr2_1:68338618-68338637 | Msa0220150:CDS | 30.0% | |
| !!! | TTAGGTGGGTTTGTTTTAAC+TGG | + | chr2_1:68335312-68335331 | Msa0220150:CDS | 35.0% |
| !!! | TGTTTTAACTGGAAACGCTT+TGG | + | chr2_1:68335323-68335342 | Msa0220150:CDS | 35.0% |
| CATAAACAACCACAGTAAAG+AGG | - | chr2_1:68335420-68335439 | None:intergenic | 35.0% | |
| CTTTACTGTGGTTGTTTATG+AGG | + | chr2_1:68335420-68335439 | Msa0220150:intron | 35.0% | |
| GGCATAAAAGGGAAAAAGTA+AGG | - | chr2_1:68336034-68336053 | None:intergenic | 35.0% | |
| AAGGAGCAGATCACAATATT+AGG | - | chr2_1:68336058-68336077 | None:intergenic | 35.0% | |
| AGCATGCATGAAAATGTTGT+AGG | + | chr2_1:68336118-68336137 | Msa0220150:intron | 35.0% | |
| ATGCATGAAAATGTTGTAGG+TGG | + | chr2_1:68336121-68336140 | Msa0220150:intron | 35.0% | |
| TGCATGAAAATGTTGTAGGT+GGG | + | chr2_1:68336122-68336141 | Msa0220150:intron | 35.0% | |
| CAGACATAGTGTCAAATTCA+AGG | - | chr2_1:68336207-68336226 | None:intergenic | 35.0% | |
| TCCTCATCTATTAGAATGGT+CGG | - | chr2_1:68336255-68336274 | None:intergenic | 35.0% | |
| CATCAAACACATTTATTGGC+AGG | - | chr2_1:68336285-68336304 | None:intergenic | 35.0% | |
| ! | GTGTTAATTTTCGTAGGGAA+TGG | + | chr2_1:68336314-68336333 | Msa0220150:intron | 35.0% |
| !! | TGCTTTTTGAAAGACTATGG+TGG | + | chr2_1:68336351-68336370 | Msa0220150:CDS | 35.0% |
| TCCAATGAACAATGAGATTG+AGG | + | chr2_1:68336404-68336423 | Msa0220150:CDS | 35.0% | |
| ACCTCAATCTCATTGTTCAT+TGG | - | chr2_1:68336408-68336427 | None:intergenic | 35.0% | |
| ! | GACAAGCTTTATATGAGGAA+AGG | + | chr2_1:68336447-68336466 | Msa0220150:CDS | 35.0% |
| ! | AGCTTTATATGAGGAAAGGT+TGG | + | chr2_1:68336451-68336470 | Msa0220150:CDS | 35.0% |
| !! | TATATGAGGAAAGGTTGGTA+TGG | + | chr2_1:68336456-68336475 | Msa0220150:CDS | 35.0% |
| ATCGTCAAGGTCATAAGATT+TGG | - | chr2_1:68336540-68336559 | None:intergenic | 35.0% | |
| AAATCTGTTGTTGATCGTCA+AGG | - | chr2_1:68336553-68336572 | None:intergenic | 35.0% | |
| ! | GATCAACAACAGATTTTTCG+AGG | + | chr2_1:68336557-68336576 | Msa0220150:CDS | 35.0% |
| ACTCCTATGTGTACAATTGA+AGG | + | chr2_1:68336940-68336959 | Msa0220150:intron | 35.0% | |
| TCACCTTCAATTGTACACAT+AGG | - | chr2_1:68336946-68336965 | None:intergenic | 35.0% | |
| TGTGTACAATTGAAGGTGAT+TGG | + | chr2_1:68336947-68336966 | Msa0220150:intron | 35.0% | |
| GTGTACAATTGAAGGTGATT+GGG | + | chr2_1:68336948-68336967 | Msa0220150:intron | 35.0% | |
| TGTACAATTGAAGGTGATTG+GGG | + | chr2_1:68336949-68336968 | Msa0220150:intron | 35.0% | |
| GCTTCTATATTCTGTTTCCA+AGG | + | chr2_1:68337135-68337154 | Msa0220150:intron | 35.0% | |
| AACGCAGCATAAACAAAACT+TGG | - | chr2_1:68337410-68337429 | None:intergenic | 35.0% | |
| ! | ATATGGTTGAAGAGTGTAAG+TGG | + | chr2_1:68337488-68337507 | Msa0220150:intron | 35.0% |
| ! | CATGTCTGAAATAGAAACCA+TGG | + | chr2_1:68337677-68337696 | Msa0220150:intron | 35.0% |
| TCGCCTTTAACTGCTAAATA+AGG | - | chr2_1:68337799-68337818 | None:intergenic | 35.0% | |
| TTATTTAGCAGTTAAAGGCG+AGG | + | chr2_1:68337798-68337817 | Msa0220150:intron | 35.0% | |
| AGTTCAGAAAAAGAATGGCA+AGG | + | chr2_1:68337910-68337929 | Msa0220150:CDS | 35.0% | |
| ATAACATTGTAGATGGTGCA+TGG | + | chr2_1:68337972-68337991 | Msa0220150:CDS | 35.0% | |
| TAACATTGTAGATGGTGCAT+GGG | + | chr2_1:68337973-68337992 | Msa0220150:CDS | 35.0% | |
| ! | ATGGGTCTATCTGAAATATG+CGG | + | chr2_1:68337991-68338010 | Msa0220150:CDS | 35.0% |
| ATGGTCATGAGTAGTAGATT+AGG | - | chr2_1:68338019-68338038 | None:intergenic | 35.0% | |
| ACTCATGACCATAAGAAACA+AGG | + | chr2_1:68338027-68338046 | Msa0220150:CDS | 35.0% | |
| TCAAAATCTTGACAGATGTG+CGG | - | chr2_1:68338147-68338166 | None:intergenic | 35.0% | |
| CATATTATTTGCAACAGCGA+AGG | - | chr2_1:68338398-68338417 | None:intergenic | 35.0% | |
| AGGTTTCACATAGTATCCAT+GGG | - | chr2_1:68338560-68338579 | None:intergenic | 35.0% | |
| TAGGTTTCACATAGTATCCA+TGG | - | chr2_1:68338561-68338580 | None:intergenic | 35.0% | |
| TGGATACTATGTGAAACCTA+TGG | + | chr2_1:68338561-68338580 | Msa0220150:CDS | 35.0% | |
| ! | ATTTGAGATAGTGATTGACC+TGG | - | chr2_1:68338612-68338631 | None:intergenic | 35.0% |
| TGCATGTTACCTCTTTACTG+TGG | + | chr2_1:68335408-68335427 | Msa0220150:intron | 40.0% | |
| GACATGCAAAGCTATGTTCT+AGG | - | chr2_1:68335621-68335640 | None:intergenic | 40.0% | |
| !! | CCTATACTGGTAACTTGCTA+AGG | - | chr2_1:68335833-68335852 | None:intergenic | 40.0% |
| CCTTAGCAAGTTACCAGTAT+AGG | + | chr2_1:68335830-68335849 | Msa0220150:intron | 40.0% | |
| ACATAACGATATCAGAGGCA+TGG | - | chr2_1:68335878-68335897 | None:intergenic | 40.0% | |
| AGGCTTCTTGTTACTCTGAT+GGG | - | chr2_1:68336014-68336033 | None:intergenic | 40.0% | |
| AAGGCTTCTTGTTACTCTGA+TGG | - | chr2_1:68336015-68336034 | None:intergenic | 40.0% | |
| GAGCAGATCACAATATTAGG+AGG | - | chr2_1:68336055-68336074 | None:intergenic | 40.0% | |
| GCATGAAAATGTTGTAGGTG+GGG | + | chr2_1:68336123-68336142 | Msa0220150:intron | 40.0% | |
| CATGAAAATGTTGTAGGTGG+GGG | + | chr2_1:68336124-68336143 | Msa0220150:intron | 40.0% | |
| TCATCATTGCCATCTCACTT+GGG | - | chr2_1:68336174-68336193 | None:intergenic | 40.0% | |
| TCCGACCATTCTAATAGATG+AGG | + | chr2_1:68336251-68336270 | Msa0220150:intron | 40.0% | |
| ! | ATGCGCGTGTTAATTTTCGT+AGG | + | chr2_1:68336308-68336327 | Msa0220150:intron | 40.0% |
| ! | TGCGCGTGTTAATTTTCGTA+GGG | + | chr2_1:68336309-68336328 | Msa0220150:intron | 40.0% |
| ! | AATTTTCGTAGGGAATGGGT+CGG | + | chr2_1:68336319-68336338 | Msa0220150:intron | 40.0% |
| GACTTCTACAACATTGAGCT+TGG | + | chr2_1:68336486-68336505 | Msa0220150:CDS | 40.0% | |
| ATTATTGGAGTAGTGTGAGC+AGG | - | chr2_1:68336594-68336613 | None:intergenic | 40.0% | |
| CGGTCCAGTTTGGATATTAT+TGG | - | chr2_1:68336609-68336628 | None:intergenic | 40.0% | |
| ACTTACTCGGATGTTAACTC+AGG | + | chr2_1:68336684-68336703 | Msa0220150:CDS | 40.0% | |
| GGATGTTAACTCAGGATGTT+TGG | + | chr2_1:68336692-68336711 | Msa0220150:CDS | 40.0% | |
| AGGATGTTTGGTATTCACTG+TGG | + | chr2_1:68336704-68336723 | Msa0220150:CDS | 40.0% | |
| ATTAGACATTGCCGTGGTTT+GGG | + | chr2_1:68336815-68336834 | Msa0220150:intron | 40.0% | |
| CGTGTTACCTCCGATAAATA+CGG | + | chr2_1:68336849-68336868 | Msa0220150:intron | 40.0% | |
| ACAGTGAGGTCCGTATTTAT+CGG | - | chr2_1:68336862-68336881 | None:intergenic | 40.0% | |
| CAACGTAATCAATGACAGTG+AGG | - | chr2_1:68336876-68336895 | None:intergenic | 40.0% | |
| ! | CTCACTGTCATTGATTACGT+TGG | + | chr2_1:68336874-68336893 | Msa0220150:intron | 40.0% |
| TTGATTACGTTGGATTTGCC+TGG | + | chr2_1:68336884-68336903 | Msa0220150:intron | 40.0% | |
| TGTCACGCTGAATGAACTTT+AGG | - | chr2_1:68336918-68336937 | None:intergenic | 40.0% | |
| GTACAATTGAAGGTGATTGG+GGG | + | chr2_1:68336950-68336969 | Msa0220150:intron | 40.0% | |
| TGATTGGGGGACAATATGTA+AGG | + | chr2_1:68336963-68336982 | Msa0220150:intron | 40.0% | |
| !! | TGATTAGAGGCATTGATCCA+AGG | + | chr2_1:68337094-68337113 | Msa0220150:intron | 40.0% |
| TCAGACTGCAATATGAACCT+TGG | - | chr2_1:68337114-68337133 | None:intergenic | 40.0% | |
| GGGTACAAAATGCATAACCT+TGG | - | chr2_1:68337155-68337174 | None:intergenic | 40.0% | |
| GCAGCATAAACAAAACTTGG+TGG | - | chr2_1:68337407-68337426 | None:intergenic | 40.0% | |
| GTGGATAAAATGATGCAGAC+CGG | + | chr2_1:68337507-68337526 | Msa0220150:intron | 40.0% | |
| TGACAGATAAAGTTCAGCCA+TGG | - | chr2_1:68337697-68337716 | None:intergenic | 40.0% | |
| ! | TGGGTCTATCTGAAATATGC+GGG | + | chr2_1:68337992-68338011 | Msa0220150:CDS | 40.0% |
| ATGACCATAAGAAACAAGGC+TGG | + | chr2_1:68338031-68338050 | Msa0220150:CDS | 40.0% | |
| !! | CAATCCAGCCTTGTTTCTTA+TGG | - | chr2_1:68338038-68338057 | None:intergenic | 40.0% |
| CATAAGAAACAAGGCTGGAT+TGG | + | chr2_1:68338036-68338055 | Msa0220150:CDS | 40.0% | |
| GCAAGGGATATATCGGATAA+TGG | - | chr2_1:68338073-68338092 | None:intergenic | 40.0% | |
| CCTGATGAAGTAATGAACCT+CGG | - | chr2_1:68338100-68338119 | None:intergenic | 40.0% | |
| CGAGGTTCATTACTTCATCA+GGG | + | chr2_1:68338098-68338117 | Msa0220150:CDS | 40.0% | |
| GAGGTTCATTACTTCATCAG+GGG | + | chr2_1:68338099-68338118 | Msa0220150:CDS | 40.0% | |
| TGCGGAAAAAATGCACTAAC+TGG | - | chr2_1:68338129-68338148 | None:intergenic | 40.0% | |
| ATGCCTTATGCTATGATTGG+TGG | + | chr2_1:68338415-68338434 | Msa0220150:CDS | 40.0% | |
| TCACCACCAATCATAGCATA+AGG | - | chr2_1:68338421-68338440 | None:intergenic | 40.0% | |
| !! | ATGCTATGATTGGTGGTGAT+TGG | + | chr2_1:68338422-68338441 | Msa0220150:CDS | 40.0% |
| GGACTGTGTTATCTTTGTCA+TGG | - | chr2_1:68338507-68338526 | None:intergenic | 40.0% | |
| GACAAAGATAACACAGTCCT+TGG | + | chr2_1:68338508-68338527 | Msa0220150:CDS | 40.0% | |
| TATGTGAAACCTATGGTCAG+CGG | + | chr2_1:68338568-68338587 | Msa0220150:CDS | 40.0% | |
| TGCACAAGGAATGCTGTCAT+TGG | + | chr2_1:68335350-68335369 | Msa0220150:CDS | 45.0% | |
| CGCTGTCATAGAACCTATAC+TGG | - | chr2_1:68335846-68335865 | None:intergenic | 45.0% | |
| !! | TCTTGTTACTCTGATGGGCT+GGG | - | chr2_1:68336009-68336028 | None:intergenic | 45.0% |
| ! | TTCTTGTTACTCTGATGGGC+TGG | - | chr2_1:68336010-68336029 | None:intergenic | 45.0% |
| TGCATGCTGCAAATCAGCTT+TGG | - | chr2_1:68336106-68336125 | None:intergenic | 45.0% | |
| ATCTCACTTGGGGTATACGT+TGG | - | chr2_1:68336163-68336182 | None:intergenic | 45.0% | |
| AACGTATACCCCAAGTGAGA+TGG | + | chr2_1:68336162-68336181 | Msa0220150:CDS | 45.0% | |
| CATCATTGCCATCTCACTTG+GGG | - | chr2_1:68336173-68336192 | None:intergenic | 45.0% | |
| CTCATCATTGCCATCTCACT+TGG | - | chr2_1:68336175-68336194 | None:intergenic | 45.0% | |
| CAAGTGAGATGGCAATGATG+AGG | + | chr2_1:68336173-68336192 | Msa0220150:CDS | 45.0% | |
| ! | GAGGCGACAAGCTTTATATG+AGG | + | chr2_1:68336442-68336461 | Msa0220150:CDS | 45.0% |
| !! | GAAAGGTTGGTATGGACTGA+AGG | + | chr2_1:68336464-68336483 | Msa0220150:CDS | 45.0% |
| !! | ACAACATTGAGCTTGGTGCA+TGG | + | chr2_1:68336493-68336512 | Msa0220150:CDS | 45.0% |
| AAAATCACGACGGTCCAGTT+TGG | - | chr2_1:68336619-68336638 | None:intergenic | 45.0% | |
| ! | AAACTGGACCGTCGTGATTT+TGG | + | chr2_1:68336618-68336637 | Msa0220150:CDS | 45.0% |
| ! | AACTGGACCGTCGTGATTTT+GGG | + | chr2_1:68336619-68336638 | Msa0220150:CDS | 45.0% |
| AATTCCCCCCAAAATCACGA+CGG | - | chr2_1:68336629-68336648 | None:intergenic | 45.0% | |
| !! | TCGTGATTTTGGGGGGAATT+TGG | + | chr2_1:68336629-68336648 | Msa0220150:CDS | 45.0% |
| ATCTGCATTAGACATTGCCG+TGG | + | chr2_1:68336809-68336828 | Msa0220150:intron | 45.0% | |
| CATTAGACATTGCCGTGGTT+TGG | + | chr2_1:68336814-68336833 | Msa0220150:intron | 45.0% | |
| GAACTTTAGGTCACATCTCC+AGG | - | chr2_1:68336905-68336924 | None:intergenic | 45.0% | |
| AACGACCTTCGACAAACCTA+CGG | - | chr2_1:68336990-68337009 | None:intergenic | 45.0% | |
| !!! | TGTACGTTAGTTTTGTGCGG+TGG | + | chr2_1:68337644-68337663 | Msa0220150:intron | 45.0% |
| ! | GGGTCTATCTGAAATATGCG+GGG | + | chr2_1:68337993-68338012 | Msa0220150:CDS | 45.0% |
| CCGAGGTTCATTACTTCATC+AGG | + | chr2_1:68338097-68338116 | Msa0220150:CDS | 45.0% | |
| ! | TATATACCAAAGTGCCCGAG+AGG | - | chr2_1:68338183-68338202 | None:intergenic | 45.0% |
| TGTTTAACCAGACTTTGCCG+TGG | + | chr2_1:68338284-68338303 | Msa0220150:intron | 45.0% | |
| GTTTCTGTGGCAAGGATTTC+TGG | - | chr2_1:68338321-68338340 | None:intergenic | 45.0% | |
| GTAAGTGTGGTAGGTTTCTG+TGG | - | chr2_1:68338334-68338353 | None:intergenic | 45.0% | |
| CCAACAATCGTAAGTGTGGT+AGG | - | chr2_1:68338343-68338362 | None:intergenic | 45.0% | |
| CCTACCACACTTACGATTGT+TGG | + | chr2_1:68338340-68338359 | Msa0220150:CDS | 45.0% | |
| CTTACGATTGTTGGTCCGAA+CGG | + | chr2_1:68338349-68338368 | Msa0220150:CDS | 45.0% | |
| CAACAGCGAACTTAACTGCA+TGG | - | chr2_1:68338483-68338502 | None:intergenic | 45.0% | |
| TGCAGTGTATTGGGGTATGT+CGG | - | chr2_1:68338537-68338556 | None:intergenic | 45.0% | |
| ATCCATGGGTGCAGTGTATT+GGG | - | chr2_1:68338546-68338565 | None:intergenic | 45.0% | |
| TATCCATGGGTGCAGTGTAT+TGG | - | chr2_1:68338547-68338566 | None:intergenic | 45.0% | |
| GAGTATGCTGGAACAGATGT+CGG | + | chr2_1:68338645-68338664 | Msa0220150:CDS | 45.0% | |
| AGTATGCTGGAACAGATGTC+GGG | + | chr2_1:68338646-68338665 | Msa0220150:CDS | 45.0% | |
| ! | AACGCTTTGGATGCTGCACA+AGG | + | chr2_1:68335336-68335355 | Msa0220150:CDS | 50.0% |
| CAAGGAATGCTGTCATTGGC+AGG | + | chr2_1:68335354-68335373 | Msa0220150:CDS | 50.0% | |
| ATCTGCTCCTTGCTTGAGTG+TGG | + | chr2_1:68336067-68336086 | Msa0220150:intron | 50.0% | |
| ! | ACTGGACCGTCGTGATTTTG+GGG | + | chr2_1:68336620-68336639 | Msa0220150:CDS | 50.0% |
| CGCTTACAGAACCCAAACCA+CGG | - | chr2_1:68336829-68336848 | None:intergenic | 50.0% | |
| GTGAGGTCCGTATTTATCGG+AGG | - | chr2_1:68336859-68336878 | None:intergenic | 50.0% | |
| GGACAATATGTAAGGCCCGT+AGG | + | chr2_1:68336971-68336990 | Msa0220150:intron | 50.0% | |
| ACGACCTTCGACAAACCTAC+GGG | - | chr2_1:68336989-68337008 | None:intergenic | 50.0% | |
| AGGTCGTTCGATAGACCTTG+CGG | + | chr2_1:68337002-68337021 | Msa0220150:intron | 50.0% | |
| TTCGATAGACCTTGCGGTCA+CGG | + | chr2_1:68337008-68337027 | Msa0220150:intron | 50.0% | |
| CTGCATTTGTAGACGGCACA+GGG | - | chr2_1:68337071-68337090 | None:intergenic | 50.0% | |
| TCTGCATTTGTAGACGGCAC+AGG | - | chr2_1:68337072-68337091 | None:intergenic | 50.0% | |
| GATAAGTCCTCAACCGAGAC+AGG | - | chr2_1:68337295-68337314 | None:intergenic | 50.0% | |
| GGCAAGGTCTACTTCAGACA+AGG | + | chr2_1:68337926-68337945 | Msa0220150:CDS | 50.0% | |
| AGGTCTACTTCAGACAAGGC+TGG | + | chr2_1:68337930-68337949 | Msa0220150:CDS | 50.0% | |
| !! | ACTTCAGACAAGGCTGGTCT+AGG | + | chr2_1:68337936-68337955 | Msa0220150:CDS | 50.0% |
| !! | CTTCAGACAAGGCTGGTCTA+GGG | + | chr2_1:68337937-68337956 | Msa0220150:CDS | 50.0% |
| CGGCAACGCAAGGGATATAT+CGG | - | chr2_1:68338080-68338099 | None:intergenic | 50.0% | |
| ATATATCCCTTGCGTTGCCG+AGG | + | chr2_1:68338080-68338099 | Msa0220150:CDS | 50.0% | |
| AATGAACCTCGGCAACGCAA+GGG | - | chr2_1:68338089-68338108 | None:intergenic | 50.0% | |
| TAATGAACCTCGGCAACGCA+AGG | - | chr2_1:68338090-68338109 | None:intergenic | 50.0% | |
| GACTTCGTCTGATGTCCTCT+CGG | + | chr2_1:68338165-68338184 | Msa0220150:CDS | 50.0% | |
| ACTTCGTCTGATGTCCTCTC+GGG | + | chr2_1:68338166-68338185 | Msa0220150:CDS | 50.0% | |
| AACCAGACTTTGCCGTGGTA+TGG | + | chr2_1:68338289-68338308 | Msa0220150:intron | 50.0% | |
| TTCTGGCAGAAGCCATACCA+CGG | - | chr2_1:68338304-68338323 | None:intergenic | 50.0% | |
| TGTGGTAGGTTTCTGTGGCA+AGG | - | chr2_1:68338329-68338348 | None:intergenic | 50.0% | |
| CGGACCAACAATCGTAAGTG+TGG | - | chr2_1:68338347-68338366 | None:intergenic | 50.0% | |
| CATCTCCATGTACAGCCGTT+CGG | - | chr2_1:68338367-68338386 | None:intergenic | 50.0% | |
| ! | ACCTGATTTGCACATCGCAG+AGG | + | chr2_1:68338446-68338465 | Msa0220150:CDS | 50.0% |
| ACCTCTGCGATGTGCAAATC+AGG | - | chr2_1:68338450-68338469 | None:intergenic | 50.0% | |
| GATTTGCACATCGCAGAGGT+TGG | + | chr2_1:68338450-68338469 | Msa0220150:CDS | 50.0% | |
| TTGGGGTATGTCGGAAACCA+AGG | - | chr2_1:68338528-68338547 | None:intergenic | 50.0% | |
| TCCATGGGTGCAGTGTATTG+GGG | - | chr2_1:68338545-68338564 | None:intergenic | 50.0% | |
| CAGTGGTCGATATGTGTACC+AGG | + | chr2_1:68338591-68338610 | Msa0220150:CDS | 50.0% | |
| ! | TTGCAAGGCGAAGAGTATGC+TGG | + | chr2_1:68338633-68338652 | Msa0220150:CDS | 50.0% |
| GGAATGCTGTCATTGGCAGG+TGG | + | chr2_1:68335357-68335376 | Msa0220150:intron | 55.0% | |
| CCAACGACCACACTCAAGCA+AGG | - | chr2_1:68336077-68336096 | None:intergenic | 55.0% | |
| CCTTGCTTGAGTGTGGTCGT+TGG | + | chr2_1:68336074-68336093 | Msa0220150:intron | 55.0% | |
| GAGGTTCGACTGTATCGCAG+AGG | + | chr2_1:68336423-68336442 | Msa0220150:CDS | 55.0% | |
| ! | CTGGACCGTCGTGATTTTGG+GGG | + | chr2_1:68336621-68336640 | Msa0220150:CDS | 55.0% |
| ! | TGGACCGTCGTGATTTTGGG+GGG | + | chr2_1:68336622-68336641 | Msa0220150:CDS | 55.0% |
| AAGGCCCGTAGGTTTGTCGA+AGG | + | chr2_1:68336982-68337001 | Msa0220150:intron | 55.0% | |
| !! | ACAAGGCTGGTCTAGGGTGA+AGG | + | chr2_1:68337943-68337962 | Msa0220150:CDS | 55.0% |
| TGATGTCCTCTCGGGCACTT+TGG | + | chr2_1:68338174-68338193 | Msa0220150:CDS | 55.0% | |
| AGCCATACCACGGCAAAGTC+TGG | - | chr2_1:68338294-68338313 | None:intergenic | 55.0% | |
| TTGGTCCGAACGGCTGTACA+TGG | + | chr2_1:68338359-68338378 | Msa0220150:CDS | 55.0% | |
| ! | ACATCGCAGAGGTTGGTTGC+AGG | + | chr2_1:68338457-68338476 | Msa0220150:CDS | 55.0% |
| ACCCCAATACACTGCACCCA+TGG | + | chr2_1:68338541-68338560 | Msa0220150:CDS | 55.0% | |
| AAACCTATGGTCAGCGGCAG+TGG | + | chr2_1:68338574-68338593 | Msa0220150:CDS | 55.0% | |
| GATAGACCTTGCGGTCACGG+AGG | + | chr2_1:68337011-68337030 | Msa0220150:intron | 60.0% | |
| TCTTCTCCTCCGTGACCGCA+AGG | - | chr2_1:68337020-68337039 | None:intergenic | 60.0% | |
| ACGACCTCGATCCTGTGCGA+AGG | + | chr2_1:68337267-68337286 | Msa0220150:CDS | 60.0% | |
| CGACCTCGATCCTGTGCGAA+GGG | + | chr2_1:68337268-68337287 | Msa0220150:CDS | 60.0% | |
| CTGTGCGAAGGGACCTGTCT+CGG | + | chr2_1:68337279-68337298 | Msa0220150:CDS | 60.0% | |
| GAAGGGACCTGTCTCGGTTG+AGG | + | chr2_1:68337285-68337304 | Msa0220150:CDS | 60.0% | |
| GGTCCCTTCGCACAGGATCG+AGG | - | chr2_1:68337274-68337293 | None:intergenic | 65.0% | |
| CGAGACAGGTCCCTTCGCAC+AGG | - | chr2_1:68337281-68337300 | None:intergenic | 65.0% | |
| CGACCACTGCCGCTGACCAT+AGG | - | chr2_1:68338580-68338599 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 68335303 | 68338672 | 68335303 | ID=Msa0220150;Name=Msa0220150 |
| chr2_1 | mRNA | 68335303 | 68338672 | 68335303 | ID=Msa0220150-mRNA-1;Parent=Msa0220150;Name=Msa0220150-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.5|0.6|0.66|6|0|473 |
| chr2_1 | exon | 68335303 | 68335375 | 68335303 | ID=Msa0220150-mRNA-1:exon:19324;Parent=Msa0220150-mRNA-1 |
| chr2_1 | exon | 68336140 | 68336225 | 68336140 | ID=Msa0220150-mRNA-1:exon:19325;Parent=Msa0220150-mRNA-1 |
| chr2_1 | exon | 68336330 | 68336747 | 68336330 | ID=Msa0220150-mRNA-1:exon:19326;Parent=Msa0220150-mRNA-1 |
| chr2_1 | exon | 68337258 | 68337337 | 68337258 | ID=Msa0220150-mRNA-1:exon:19327;Parent=Msa0220150-mRNA-1 |
| chr2_1 | exon | 68337809 | 68338195 | 68337809 | ID=Msa0220150-mRNA-1:exon:19328;Parent=Msa0220150-mRNA-1 |
| chr2_1 | exon | 68338295 | 68338672 | 68338295 | ID=Msa0220150-mRNA-1:exon:19329;Parent=Msa0220150-mRNA-1 |
| chr2_1 | CDS | 68335303 | 68335375 | 68335303 | ID=Msa0220150-mRNA-1:cds;Parent=Msa0220150-mRNA-1 |
| chr2_1 | CDS | 68336140 | 68336225 | 68336140 | ID=Msa0220150-mRNA-1:cds;Parent=Msa0220150-mRNA-1 |
| chr2_1 | CDS | 68336330 | 68336747 | 68336330 | ID=Msa0220150-mRNA-1:cds;Parent=Msa0220150-mRNA-1 |
| chr2_1 | CDS | 68337258 | 68337337 | 68337258 | ID=Msa0220150-mRNA-1:cds;Parent=Msa0220150-mRNA-1 |
| chr2_1 | CDS | 68337809 | 68338195 | 68337809 | ID=Msa0220150-mRNA-1:cds;Parent=Msa0220150-mRNA-1 |
| chr2_1 | CDS | 68338295 | 68338672 | 68338295 | ID=Msa0220150-mRNA-1:cds;Parent=Msa0220150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
