Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222610 | XP_003597308.1 | 52.344 | 384 | 82 | 15 | 26 | 314 | 468 | 845 | 1.82e-92 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222610 | sp|Q9LX66|HERK_ARATH | 44.246 | 391 | 115 | 15 | 21 | 314 | 444 | 828 | 6.21e-77 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222610 | G7IUA3 | 52.344 | 384 | 82 | 15 | 26 | 314 | 468 | 845 | 8.70e-93 | 303 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222610 | MtrunA17_Chr2g0327671 | 52.344 | 384 | 82 | 15 | 26 | 314 | 468 | 845 | 1.68e-96 | 303 |
| Msa0222610 | MtrunA17_Chr4g0030441 | 48.021 | 379 | 102 | 14 | 26 | 314 | 465 | 838 | 2.70e-86 | 276 |
| Msa0222610 | MtrunA17_Chr2g0318301 | 36.170 | 376 | 161 | 15 | 13 | 314 | 471 | 841 | 2.78e-49 | 176 |
| Msa0222610 | MtrunA17_Chr6g0468691 | 38.217 | 314 | 113 | 11 | 17 | 254 | 468 | 776 | 1.05e-42 | 157 |
| Msa0222610 | MtrunA17_Chr8g0352381 | 42.339 | 248 | 73 | 10 | 83 | 262 | 572 | 817 | 1.26e-42 | 157 |
| Msa0222610 | MtrunA17_Chr1g0202711 | 40.078 | 257 | 84 | 9 | 81 | 268 | 542 | 797 | 1.67e-40 | 150 |
| Msa0222610 | MtrunA17_Chr1g0190581 | 34.421 | 337 | 142 | 12 | 55 | 314 | 532 | 866 | 6.33e-40 | 149 |
| Msa0222610 | MtrunA17_Chr2g0292501 | 35.987 | 314 | 125 | 12 | 24 | 265 | 500 | 809 | 1.38e-38 | 145 |
| Msa0222610 | MtrunA17_Chr7g0274261 | 41.313 | 259 | 106 | 13 | 95 | 314 | 619 | 870 | 8.06e-37 | 140 |
| Msa0222610 | MtrunA17_Chr4g0053521 | 40.948 | 232 | 97 | 9 | 98 | 295 | 1153 | 1378 | 4.60e-36 | 138 |
| Msa0222610 | MtrunA17_Chr7g0245131 | 35.238 | 315 | 123 | 12 | 41 | 282 | 531 | 837 | 1.14e-35 | 136 |
| Msa0222610 | MtrunA17_Chr4g0053561 | 42.714 | 199 | 76 | 7 | 88 | 252 | 524 | 718 | 2.05e-34 | 133 |
| Msa0222610 | MtrunA17_Chr4g0053571 | 43.750 | 192 | 70 | 7 | 95 | 252 | 588 | 775 | 1.05e-33 | 130 |
| Msa0222610 | MtrunA17_Chr4g0061081 | 37.302 | 252 | 89 | 10 | 83 | 266 | 568 | 818 | 8.51e-32 | 125 |
| Msa0222610 | MtrunA17_Chr4g0053591 | 44.385 | 187 | 70 | 9 | 98 | 252 | 242 | 426 | 8.25e-31 | 121 |
| Msa0222610 | MtrunA17_Chr1g0165521 | 34.404 | 218 | 104 | 9 | 98 | 277 | 555 | 771 | 3.62e-21 | 94.4 |
| Msa0222610 | MtrunA17_Chr8g0361611 | 36.000 | 200 | 93 | 9 | 98 | 266 | 542 | 737 | 4.56e-21 | 94.0 |
| Msa0222610 | MtrunA17_Chr5g0420171 | 36.715 | 207 | 95 | 10 | 97 | 269 | 595 | 799 | 1.63e-19 | 89.4 |
| Msa0222610 | MtrunA17_Chr5g0420151 | 37.129 | 202 | 91 | 10 | 97 | 264 | 617 | 816 | 4.34e-19 | 88.2 |
| Msa0222610 | MtrunA17_Chr7g0219611 | 32.759 | 232 | 111 | 9 | 98 | 290 | 608 | 833 | 8.71e-19 | 87.0 |
| Msa0222610 | MtrunA17_Chr7g0219621 | 33.333 | 204 | 95 | 7 | 98 | 265 | 18 | 216 | 2.93e-18 | 82.0 |
| Msa0222610 | MtrunA17_Chr7g0219721 | 32.068 | 237 | 115 | 9 | 96 | 293 | 624 | 853 | 3.03e-18 | 85.5 |
| Msa0222610 | MtrunA17_Chr7g0219691 | 32.068 | 237 | 115 | 9 | 96 | 293 | 624 | 853 | 3.64e-18 | 85.5 |
| Msa0222610 | MtrunA17_Chr7g0219571 | 33.065 | 248 | 121 | 12 | 98 | 303 | 628 | 872 | 7.63e-18 | 84.3 |
| Msa0222610 | MtrunA17_Chr7g0219651 | 31.837 | 245 | 128 | 10 | 98 | 303 | 1613 | 1857 | 1.80e-17 | 83.6 |
| Msa0222610 | MtrunA17_Chr7g0219651 | 33.051 | 236 | 104 | 10 | 80 | 265 | 583 | 814 | 1.71e-16 | 80.5 |
| Msa0222610 | MtrunA17_Chr7g0219581 | 33.690 | 187 | 90 | 8 | 98 | 251 | 52 | 237 | 5.20e-17 | 80.1 |
| Msa0222610 | MtrunA17_Chr7g0219671 | 30.932 | 236 | 129 | 7 | 98 | 299 | 626 | 861 | 5.90e-17 | 81.6 |
| Msa0222610 | MtrunA17_Chr1g0165561 | 35.484 | 186 | 88 | 8 | 111 | 265 | 5 | 189 | 1.11e-16 | 77.0 |
| Msa0222610 | MtrunA17_Chr2g0314201 | 35.065 | 154 | 71 | 7 | 98 | 223 | 101 | 253 | 6.85e-16 | 76.3 |
| Msa0222610 | MtrunA17_Chr7g0219781 | 33.471 | 242 | 115 | 11 | 98 | 299 | 629 | 864 | 9.73e-16 | 78.2 |
| Msa0222610 | MtrunA17_Chr7g0219601 | 33.871 | 186 | 91 | 7 | 98 | 251 | 612 | 797 | 1.07e-15 | 77.8 |
| Msa0222610 | MtrunA17_Chr7g0219681 | 27.972 | 286 | 128 | 8 | 41 | 251 | 520 | 802 | 1.23e-14 | 74.7 |
| Msa0222610 | MtrunA17_Chr8g0370461 | 30.220 | 182 | 97 | 6 | 95 | 246 | 194 | 375 | 3.05e-12 | 67.0 |
| Msa0222610 | MtrunA17_Chr5g0399981 | 29.327 | 208 | 109 | 7 | 77 | 250 | 146 | 349 | 6.37e-12 | 65.5 |
| Msa0222610 | MtrunA17_Chr4g0055301 | 28.436 | 211 | 113 | 7 | 77 | 253 | 152 | 358 | 9.46e-12 | 65.1 |
| Msa0222610 | MtrunA17_Chr8g0336581 | 26.106 | 226 | 129 | 7 | 100 | 291 | 181 | 402 | 3.93e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222610 | AT3G46290.1 | 44.246 | 391 | 115 | 15 | 21 | 314 | 444 | 828 | 6.32e-78 | 254 |
| Msa0222610 | AT5G59700.1 | 51.449 | 276 | 63 | 11 | 83 | 289 | 523 | 796 | 2.28e-64 | 218 |
| Msa0222610 | AT5G54380.1 | 39.542 | 306 | 108 | 12 | 83 | 314 | 551 | 853 | 3.32e-48 | 173 |
| Msa0222610 | AT5G61350.1 | 37.500 | 344 | 132 | 13 | 2 | 267 | 484 | 822 | 2.39e-47 | 170 |
| Msa0222610 | AT4G39110.1 | 38.820 | 322 | 120 | 12 | 12 | 262 | 497 | 812 | 9.22e-44 | 160 |
| Msa0222610 | AT2G39360.1 | 34.146 | 369 | 146 | 15 | 23 | 314 | 465 | 813 | 1.64e-42 | 156 |
| Msa0222610 | AT2G21480.1 | 49.746 | 197 | 68 | 8 | 95 | 261 | 615 | 810 | 9.45e-41 | 152 |
| Msa0222610 | AT5G24010.1 | 46.277 | 188 | 69 | 8 | 98 | 254 | 582 | 768 | 1.71e-39 | 148 |
| Msa0222610 | AT3G04690.1 | 35.045 | 331 | 135 | 13 | 55 | 314 | 527 | 848 | 1.34e-38 | 145 |
| Msa0222610 | AT3G51550.1 | 33.978 | 362 | 139 | 14 | 3 | 271 | 474 | 828 | 9.01e-38 | 143 |
| Msa0222610 | AT1G30570.1 | 35.032 | 314 | 132 | 10 | 22 | 264 | 497 | 809 | 1.49e-37 | 142 |
| Msa0222610 | AT5G28680.1 | 35.241 | 332 | 137 | 13 | 55 | 314 | 531 | 856 | 2.34e-37 | 142 |
| Msa0222610 | AT5G28680.2 | 35.241 | 332 | 137 | 13 | 55 | 314 | 531 | 856 | 2.34e-37 | 142 |
| Msa0222610 | AT2G23200.1 | 42.857 | 203 | 83 | 7 | 95 | 265 | 578 | 779 | 1.65e-30 | 122 |
| Msa0222610 | AT5G38990.1 | 31.959 | 291 | 121 | 12 | 40 | 254 | 520 | 809 | 3.60e-24 | 103 |
| Msa0222610 | AT5G39000.1 | 30.928 | 291 | 124 | 12 | 40 | 254 | 513 | 802 | 2.08e-22 | 98.2 |
| Msa0222610 | AT2G17220.2 | 30.233 | 215 | 116 | 7 | 94 | 278 | 185 | 395 | 3.02e-16 | 79.3 |
| Msa0222610 | AT2G17220.1 | 30.233 | 215 | 116 | 7 | 94 | 278 | 186 | 396 | 3.46e-16 | 79.0 |
| Msa0222610 | AT1G76370.1 | 30.939 | 181 | 94 | 6 | 98 | 247 | 170 | 350 | 2.14e-13 | 70.5 |
| Msa0222610 | AT1G26970.1 | 27.119 | 236 | 132 | 9 | 98 | 303 | 187 | 412 | 1.70e-12 | 68.2 |
| Msa0222610 | AT1G26970.2 | 26.724 | 232 | 134 | 8 | 100 | 303 | 74 | 297 | 1.85e-12 | 67.4 |
| Msa0222610 | AT4G17660.1 | 29.508 | 183 | 99 | 6 | 93 | 245 | 186 | 368 | 2.75e-11 | 64.3 |
Find 75 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGGCGCAAGGGGAGTTT+TGG | 0.189892 | 2_1:+71881951 | Msa0222610:intron |
| ATATCTTGTCGAAAACTTAA+TGG | 0.239772 | 2_1:+71881867 | Msa0222610:CDS |
| TTGTTGAGAGTTGGATTATT+GGG | 0.266911 | 2_1:+71881500 | Msa0222610:intron |
| AGAGTTGGATTATTGGGGTT+GGG | 0.290649 | 2_1:+71881506 | Msa0222610:intron |
| GTTAATGGATGGCTGGAAAT+TGG | 0.308418 | 2_1:+71881555 | Msa0222610:CDS |
| TCTAGTGTGGATGATCTTTC+CGG | 0.308717 | 2_1:+71882357 | Msa0222610:CDS |
| AGTATACAAGGGAGAGTTAA+TGG | 0.311117 | 2_1:+71881540 | Msa0222610:CDS |
| TCATAGATCCATTGCTTCCT+AGG | 0.330200 | 2_1:+71882014 | Msa0222610:CDS |
| AAATCAAGCCAGATTCTCTT+AGG | 0.353849 | 2_1:+71882124 | Msa0222610:CDS |
| GCAGACTTCCTAAGAGAATC+TGG | 0.362776 | 2_1:-71882132 | None:intergenic |
| TTTGTTGAGAGTTGGATTAT+TGG | 0.363876 | 2_1:+71881499 | Msa0222610:intron |
| TCAGTTCTGCCTGCGACATC+TGG | 0.379508 | 2_1:+71881638 | Msa0222610:CDS |
| CTTCAAGAAGCTGTTGTTCA+AGG | 0.384779 | 2_1:+71882243 | Msa0222610:CDS |
| GAGTTGGATTATTGGGGTTG+GGG | 0.389336 | 2_1:+71881507 | Msa0222610:intron |
| AATAAGACTATAGTAGGCTT+TGG | 0.398070 | 2_1:-71884115 | None:intergenic |
| CATTTGCATCCTGGTAGAAA+TGG | 0.406406 | 2_1:-71882320 | None:intergenic |
| ATTGTATCATTGACGGATAA+TGG | 0.409966 | 2_1:-71881372 | None:intergenic |
| CACATGCATTTGATTGAGCT+TGG | 0.415872 | 2_1:-71881926 | None:intergenic |
| GAGAGTTGGATTATTGGGGT+TGG | 0.442621 | 2_1:+71881505 | Msa0222610:intron |
| ACATGCATTTGATTGAGCTT+GGG | 0.447607 | 2_1:-71881925 | None:intergenic |
| TCCATTGCTTCCTAGGGAAA+TGG | 0.451299 | 2_1:+71882021 | Msa0222610:CDS |
| GATTTCAGATTGTCAGAAAC+CGG | 0.457171 | 2_1:+71881901 | Msa0222610:CDS |
| TGGAAATTGGTAGTGAAGAG+AGG | 0.470578 | 2_1:+71881568 | Msa0222610:CDS |
| AGTTGGATTATTGGGGTTGG+GGG | 0.470696 | 2_1:+71881508 | Msa0222610:intron |
| GATTGGCGAACTCTCTCAAC+AGG | 0.470733 | 2_1:+71882293 | Msa0222610:CDS |
| GCTATTAATAAGACTATAGT+AGG | 0.471488 | 2_1:-71884121 | None:intergenic |
| ATCTTTCCGGTGTTTCTAAG+AGG | 0.471562 | 2_1:+71882370 | Msa0222610:CDS |
| AGCATTTATTGTCGTGCCAT+TGG | 0.472651 | 2_1:-71881419 | None:intergenic |
| GAAAACAGCACAAATATGAT+TGG | 0.482432 | 2_1:+71882276 | Msa0222610:CDS |
| CATTTGATTGAGCTTGGGAC+CGG | 0.483144 | 2_1:-71881920 | None:intergenic |
| TTGGTGTAGTTCTCTGTGCA+AGG | 0.492858 | 2_1:+71881987 | Msa0222610:CDS |
| ATGATACAATCACATACAAT+GGG | 0.503298 | 2_1:+71881385 | Msa0222610:CDS |
| GGAGTTTCTGTTGTACAAGC+CGG | 0.507308 | 2_1:-71884094 | None:intergenic |
| AATGGTGAACTTAGCAGAAT+CGG | 0.508062 | 2_1:+71882039 | Msa0222610:CDS |
| GAGAGACTTGAAATATGCAT+TGG | 0.511214 | 2_1:+71881778 | Msa0222610:CDS |
| GTATGTGATTGTATCATTGA+CGG | 0.522247 | 2_1:-71881379 | None:intergenic |
| TTCTTTGTCTGCTTCTAGTG+TGG | 0.522575 | 2_1:+71882344 | Msa0222610:CDS |
| AGGGAGAGTTAATGGATGGC+TGG | 0.525591 | 2_1:+71881548 | Msa0222610:CDS |
| AGGGAATACACGGTTGCACC+AGG | 0.527564 | 2_1:+71881588 | Msa0222610:CDS |
| ACCATTTCCCTAGGAAGCAA+TGG | 0.533161 | 2_1:-71882022 | None:intergenic |
| TGTTGAGAGTTGGATTATTG+GGG | 0.533844 | 2_1:+71881501 | Msa0222610:intron |
| GCTAAGTTCACCATTTCCCT+AGG | 0.534661 | 2_1:-71882031 | None:intergenic |
| AATGATACAATCACATACAA+TGG | 0.537213 | 2_1:+71881384 | Msa0222610:CDS |
| AAACTTAATGGCTAAAGTTG+CGG | 0.537778 | 2_1:+71881879 | Msa0222610:CDS |
| TGCATGTGAGCACAGGCGCA+AGG | 0.542108 | 2_1:+71881941 | Msa0222610:intron |
| GCATGTGAGCACAGGCGCAA+GGG | 0.545090 | 2_1:+71881942 | Msa0222610:intron |
| ACAGCTTCTTGAAGTTGAAG+AGG | 0.549314 | 2_1:-71882234 | None:intergenic |
| ACAAAGAAACATTTGCATCC+TGG | 0.552616 | 2_1:-71882329 | None:intergenic |
| TCATTACCTTCTTGCTAATG+CGG | 0.553533 | 2_1:+71881816 | Msa0222610:CDS |
| TCAATTTCAGTTCGAAACCC+TGG | 0.553797 | 2_1:-71881606 | None:intergenic |
| CATAGATCCATTGCTTCCTA+GGG | 0.556464 | 2_1:+71882015 | Msa0222610:CDS |
| GGAAGCAATGGATCTATGAC+AGG | 0.560723 | 2_1:-71882010 | None:intergenic |
| CATGTGAGCACAGGCGCAAG+GGG | 0.561325 | 2_1:+71881943 | Msa0222610:intron |
| GAATAACCGCATTAGCAAGA+AGG | 0.563646 | 2_1:-71881822 | None:intergenic |
| TTTCCGGTGTTTCTAAGAGG+AGG | 0.565470 | 2_1:+71882373 | Msa0222610:CDS |
| TACCCTCCTCTTAGAAACAC+CGG | 0.571353 | 2_1:-71882376 | None:intergenic |
| TTCCGGTGTTTCTAAGAGGA+GGG | 0.572873 | 2_1:+71882374 | Msa0222610:CDS |
| TGGTGTTGACAAGCCTTCAG+TGG | 0.578871 | 2_1:+71882185 | Msa0222610:CDS |
| GTGCAGGAAAAGGAAGTGAC+TGG | 0.581849 | 2_1:+71881320 | Msa0222610:intron |
| GGAAATTGGTAGTGAAGAGA+GGG | 0.594215 | 2_1:+71881569 | Msa0222610:CDS |
| GGTGTTGACAAGCCTTCAGT+GGG | 0.594914 | 2_1:+71882186 | Msa0222610:CDS |
| GTCATCGATACAGCACTCGC+AGG | 0.601694 | 2_1:+71882100 | Msa0222610:CDS |
| ATGGGAAGTAAATATTCCAA+TGG | 0.602396 | 2_1:+71881403 | Msa0222610:CDS |
| ACTCCCAAGCTTAAGTTGGA+AGG | 0.605304 | 2_1:+71881756 | Msa0222610:intron |
| TCAAAGACACCAGATGTCGC+AGG | 0.606175 | 2_1:-71881647 | None:intergenic |
| TACAAGGGAGAGTTAATGGA+TGG | 0.606479 | 2_1:+71881544 | Msa0222610:CDS |
| AAGAATACATCTCCCACTGA+AGG | 0.608879 | 2_1:-71882198 | None:intergenic |
| GGAAGTGACTGGCAAGACAA+AGG | 0.618370 | 2_1:+71881331 | Msa0222610:CDS |
| ATATGCATTGGATCTGCTAG+AGG | 0.622081 | 2_1:+71881790 | Msa0222610:CDS |
| ACAGGTCAACCATTTCTACC+AGG | 0.655382 | 2_1:+71882311 | Msa0222610:CDS |
| TGCACAGAGAACTACACCAA+AGG | 0.656304 | 2_1:-71881984 | None:intergenic |
| TAGTGAAGAGAGGGAATACA+CGG | 0.667984 | 2_1:+71881578 | Msa0222610:CDS |
| GACAAAGGCAGTCAAAGACA+CGG | 0.682941 | 2_1:+71881346 | Msa0222610:CDS |
| AGAACTACACCAAAGGATCG+AGG | 0.686001 | 2_1:-71881977 | None:intergenic |
| GGGAATACACGGTTGCACCA+GGG | 0.709484 | 2_1:+71881589 | Msa0222610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACAAATTAAAATTTAAC+AGG | + | chr2_1:71879943-71879962 | Msa0222610:intron | 10.0% |
| !!! | AATGTATTTTAATTCAAATA+TGG | - | chr2_1:71883325-71883344 | None:intergenic | 10.0% |
| !!! | ATTGTCATTTTAAAACATAA+AGG | - | chr2_1:71880274-71880293 | None:intergenic | 15.0% |
| !! | TTCTTTCATATTAAAGATTA+AGG | + | chr2_1:71882898-71882917 | Msa0222610:intron | 15.0% |
| !!! | TATTTTCATGTAAATCAAAT+TGG | + | chr2_1:71883053-71883072 | Msa0222610:intron | 15.0% |
| !!! | TTAATTCAAATATGGATTAT+AGG | - | chr2_1:71883317-71883336 | None:intergenic | 15.0% |
| !! | TAACAGGAACTTATTTAATT+AGG | + | chr2_1:71879959-71879978 | Msa0222610:intron | 20.0% |
| !! | TTTAGTATGACATTTACTTT+AGG | + | chr2_1:71880170-71880189 | Msa0222610:intron | 20.0% |
| !! | GTTACCTAAAATTAAGTAAA+GGG | - | chr2_1:71880214-71880233 | None:intergenic | 20.0% |
| !! | TGTTACCTAAAATTAAGTAA+AGG | - | chr2_1:71880215-71880234 | None:intergenic | 20.0% |
| !! | TAAAACATAAAGGACTAAAT+CGG | - | chr2_1:71880264-71880283 | None:intergenic | 20.0% |
| !!! | TGATTTGTATAATGAAGATT+TGG | + | chr2_1:71880340-71880359 | Msa0222610:intron | 20.0% |
| !! | GATTTGTATAATGAAGATTT+GGG | + | chr2_1:71880341-71880360 | Msa0222610:intron | 20.0% |
| !!! | ATATATATTTAGGGTCTATT+CGG | - | chr2_1:71880985-71881004 | None:intergenic | 20.0% |
| !! | CAATACATAATTTAGAAAAG+GGG | - | chr2_1:71882438-71882457 | None:intergenic | 20.0% |
| !! | GCAATACATAATTTAGAAAA+GGG | - | chr2_1:71882439-71882458 | None:intergenic | 20.0% |
| !! | TGCAATACATAATTTAGAAA+AGG | - | chr2_1:71882440-71882459 | None:intergenic | 20.0% |
| !! | ATAACAAATGAAATTACAAC+AGG | - | chr2_1:71882924-71882943 | None:intergenic | 20.0% |
| !! | TTTCATCTATTATTAGTTAG+TGG | - | chr2_1:71883247-71883266 | None:intergenic | 20.0% |
| !! | ATTTGTAAGTGATTTATGTT+TGG | - | chr2_1:71883588-71883607 | None:intergenic | 20.0% |
| !! | AATCATGATAAAATTTGTCA+TGG | + | chr2_1:71883675-71883694 | Msa0222610:intron | 20.0% |
| !!! | GTTTTAAGAACATATATTAC+TGG | - | chr2_1:71883783-71883802 | None:intergenic | 20.0% |
| !! | TTAAAACACAAACTAATTGA+AGG | + | chr2_1:71883796-71883815 | Msa0222610:intron | 20.0% |
| !! | CTAAAAGAAAAGACTAAAAT+GGG | - | chr2_1:71884021-71884040 | None:intergenic | 20.0% |
| !! | TCTAAAAGAAAAGACTAAAA+TGG | - | chr2_1:71884022-71884041 | None:intergenic | 20.0% |
| ! | TATTTGTATGTTTGGAAACT+CGG | - | chr2_1:71879598-71879617 | None:intergenic | 25.0% |
| ! | AAGAATCCTATTTGTATGTT+TGG | - | chr2_1:71879606-71879625 | None:intergenic | 25.0% |
| ! | AGGAACTTATTTAATTAGGA+GGG | + | chr2_1:71879963-71879982 | Msa0222610:intron | 25.0% |
| ! | AAAACATAAAGGACTAAATC+GGG | - | chr2_1:71880263-71880282 | None:intergenic | 25.0% |
| ! | AGTGTTACCTAATTAAGTTA+AGG | + | chr2_1:71880439-71880458 | Msa0222610:intron | 25.0% |
| ! | GTGTTACCTAATTAAGTTAA+GGG | + | chr2_1:71880440-71880459 | Msa0222610:intron | 25.0% |
| ! | TATCATTTGCATCACAATAT+TGG | + | chr2_1:71880608-71880627 | Msa0222610:intron | 25.0% |
| !!! | TTTGTTTGTTGTTCATTTGA+AGG | + | chr2_1:71880656-71880675 | Msa0222610:intron | 25.0% |
| !! | GTTTGTTTGATTGTTTGTTT+TGG | + | chr2_1:71881011-71881030 | Msa0222610:intron | 25.0% |
| ! | AATGATACAATCACATACAA+TGG | + | chr2_1:71881384-71881403 | Msa0222610:CDS | 25.0% |
| ! | ATGATACAATCACATACAAT+GGG | + | chr2_1:71881385-71881404 | Msa0222610:CDS | 25.0% |
| ! | ATATCTTGTCGAAAACTTAA+TGG | + | chr2_1:71881867-71881886 | Msa0222610:CDS | 25.0% |
| ! | TCAGAAAAAAAAAAGACAGT+TGG | + | chr2_1:71882072-71882091 | Msa0222610:CDS | 25.0% |
| ! | CATAGATTTGAAAAGAAAGA+TGG | + | chr2_1:71882721-71882740 | Msa0222610:intron | 25.0% |
| ! | GTTATTGAAACATGCTTAAT+TGG | + | chr2_1:71882745-71882764 | Msa0222610:intron | 25.0% |
| ! | AAATACCTGAATCTGAAAAT+TGG | + | chr2_1:71882850-71882869 | Msa0222610:intron | 25.0% |
| ! | GATTTCATGCTTAATCAAAT+AGG | + | chr2_1:71882973-71882992 | Msa0222610:intron | 25.0% |
| ! | CATGATGAAATGCTTATATA+TGG | + | chr2_1:71883163-71883182 | Msa0222610:intron | 25.0% |
| ! | AAACTTGATACTGATATGTT+TGG | + | chr2_1:71883470-71883489 | Msa0222610:intron | 25.0% |
| ! | TTGGTTGAACAATAAATTCA+AGG | - | chr2_1:71883548-71883567 | None:intergenic | 25.0% |
| ! | GGATGTATTCATCTAAAAAT+TGG | - | chr2_1:71883567-71883586 | None:intergenic | 25.0% |
| !! | TAGTAGTATTTTCCATGATA+GGG | - | chr2_1:71883959-71883978 | None:intergenic | 25.0% |
| ! | CTAATCTGATTAGATGAAAA+TGG | - | chr2_1:71884059-71884078 | None:intergenic | 25.0% |
| GAGTTTCCAAACATACAAAT+AGG | + | chr2_1:71879597-71879616 | Msa0222610:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | - | chr2_1:71879767-71879786 | None:intergenic | 30.0% | |
| CAGGAACTTATTTAATTAGG+AGG | + | chr2_1:71879962-71879981 | Msa0222610:intron | 30.0% | |
| GGAACTTATTTAATTAGGAG+GGG | + | chr2_1:71879964-71879983 | Msa0222610:intron | 30.0% | |
| GAACTTATTTAATTAGGAGG+GGG | + | chr2_1:71879965-71879984 | Msa0222610:intron | 30.0% | |
| TAGTTGCATTATAAACACAC+GGG | - | chr2_1:71880067-71880086 | None:intergenic | 30.0% | |
| CTAGTTGCATTATAAACACA+CGG | - | chr2_1:71880068-71880087 | None:intergenic | 30.0% | |
| CAAAAATAACAGAAAAGTGG+AGG | - | chr2_1:71880137-71880156 | None:intergenic | 30.0% | |
| CCACAAAAATAACAGAAAAG+TGG | - | chr2_1:71880140-71880159 | None:intergenic | 30.0% | |
| !!! | CCACTTTTCTGTTATTTTTG+TGG | + | chr2_1:71880137-71880156 | Msa0222610:intron | 30.0% |
| !!! | TTCTGTTATTTTTGTGGATG+TGG | + | chr2_1:71880143-71880162 | Msa0222610:intron | 30.0% |
| !!! | TCTGTTATTTTTGTGGATGT+GGG | + | chr2_1:71880144-71880163 | Msa0222610:intron | 30.0% |
| ! | TCGTCCCTTTACTTAATTTT+AGG | + | chr2_1:71880207-71880226 | Msa0222610:intron | 30.0% |
| TCGGGACTAAAAAAAGATAA+AGG | - | chr2_1:71880245-71880264 | None:intergenic | 30.0% | |
| ATTCGTCCCTTAACTTAATT+AGG | - | chr2_1:71880449-71880468 | None:intergenic | 30.0% | |
| GTGCTTTCATGTTAAAGTAA+AGG | - | chr2_1:71880484-71880503 | None:intergenic | 30.0% | |
| TTAAATCAACTGAAGATAGC+AGG | - | chr2_1:71880566-71880585 | None:intergenic | 30.0% | |
| ! | TAATGTGCTTTTCTTGTCAA+TGG | + | chr2_1:71880681-71880700 | Msa0222610:intron | 30.0% |
| ! | AATGTGCTTTTCTTGTCAAT+GGG | + | chr2_1:71880682-71880701 | Msa0222610:intron | 30.0% |
| AAGTTATCCTGAAGAGTTTA+TGG | + | chr2_1:71880855-71880874 | Msa0222610:intron | 30.0% | |
| CTTATTTCCATAAACTCTTC+AGG | - | chr2_1:71880865-71880884 | None:intergenic | 30.0% | |
| TTAAATGTACCAAACAAGGA+GGG | - | chr2_1:71881229-71881248 | None:intergenic | 30.0% | |
| ! | GCATTGTTATGTTTTACGAA+AGG | - | chr2_1:71881278-71881297 | None:intergenic | 30.0% |
| ! | ATTGTATCATTGACGGATAA+TGG | - | chr2_1:71881375-71881394 | None:intergenic | 30.0% |
| GTATGTGATTGTATCATTGA+CGG | - | chr2_1:71881382-71881401 | None:intergenic | 30.0% | |
| ATGGGAAGTAAATATTCCAA+TGG | + | chr2_1:71881403-71881422 | Msa0222610:CDS | 30.0% | |
| ! | CAAACAATTTTGTTGAGAGT+TGG | + | chr2_1:71881491-71881510 | Msa0222610:intron | 30.0% |
| TTTGTTGAGAGTTGGATTAT+TGG | + | chr2_1:71881499-71881518 | Msa0222610:intron | 30.0% | |
| TTGTTGAGAGTTGGATTATT+GGG | + | chr2_1:71881500-71881519 | Msa0222610:intron | 30.0% | |
| GATCCTTATACATGAATACA+TGG | + | chr2_1:71881698-71881717 | Msa0222610:intron | 30.0% | |
| TCACCATGTATTCATGTATA+AGG | - | chr2_1:71881704-71881723 | None:intergenic | 30.0% | |
| TATACATGAATACATGGTGA+AGG | + | chr2_1:71881704-71881723 | Msa0222610:intron | 30.0% | |
| ATACATGAATACATGGTGAA+GGG | + | chr2_1:71881705-71881724 | Msa0222610:intron | 30.0% | |
| AAACTTAATGGCTAAAGTTG+CGG | + | chr2_1:71881879-71881898 | Msa0222610:CDS | 30.0% | |
| GAAAAATGCTTGGTTGATTA+TGG | + | chr2_1:71882165-71882184 | Msa0222610:CDS | 30.0% | |
| GAAAACAGCACAAATATGAT+TGG | + | chr2_1:71882276-71882295 | Msa0222610:CDS | 30.0% | |
| ATTCATACAAAACTAACACG+TGG | + | chr2_1:71882595-71882614 | Msa0222610:intron | 30.0% | |
| ACAAACATTGACACAAACAA+CGG | - | chr2_1:71882655-71882674 | None:intergenic | 30.0% | |
| AGGTATTTCTCTGATTGATA+AGG | - | chr2_1:71882838-71882857 | None:intergenic | 30.0% | |
| ! | TTAAGCCAATTTTCAGATTC+AGG | - | chr2_1:71882858-71882877 | None:intergenic | 30.0% |
| ! | CAAATTTTCAAAGAGAGAAC+AGG | + | chr2_1:71883017-71883036 | Msa0222610:intron | 30.0% |
| !! | TAACTAACAACTGTTTTTCC+TGG | + | chr2_1:71883273-71883292 | Msa0222610:intron | 30.0% |
| TAGTTGAATGAATTTACCAC+CGG | - | chr2_1:71883385-71883404 | None:intergenic | 30.0% | |
| ATATGTACGCATTGTATGTT+TGG | + | chr2_1:71883409-71883428 | Msa0222610:intron | 30.0% | |
| ! | CAATTTTGTCTCATCAAAAG+TGG | - | chr2_1:71883437-71883456 | None:intergenic | 30.0% |
| ! | TGAGACAAAATTGATTCTTG+AGG | + | chr2_1:71883444-71883463 | Msa0222610:intron | 30.0% |
| TAAAGTAGCAGAAACTTCTA+TGG | + | chr2_1:71883729-71883748 | Msa0222610:intron | 30.0% | |
| ! | CTAGTAGTATTTTCCATGAT+AGG | - | chr2_1:71883960-71883979 | None:intergenic | 30.0% |
| !!! | CTACTAGTCTTTTCTTTTTG+TGG | + | chr2_1:71883973-71883992 | Msa0222610:intron | 30.0% |
| !!! | TTAGATACACCATTTTTAGC+CGG | + | chr2_1:71884075-71884094 | Msa0222610:CDS | 30.0% |
| AGTTGCATTATAAACACACG+GGG | - | chr2_1:71880066-71880085 | None:intergenic | 35.0% | |
| ! | GAAAAGTGGAGGCATAAATT+AGG | - | chr2_1:71880126-71880145 | None:intergenic | 35.0% |
| TCTTCATCTTCGTTCTTTAC+TGG | - | chr2_1:71880506-71880525 | None:intergenic | 35.0% | |
| AACGAAGATGAAGATGAAGA+AGG | + | chr2_1:71880512-71880531 | Msa0222610:intron | 35.0% | |
| TCTTGCAAAGAAGTTACTTC+TGG | + | chr2_1:71881034-71881053 | Msa0222610:intron | 35.0% | |
| TAGTAAAGTTGTGTGATAGC+TGG | + | chr2_1:71881066-71881085 | Msa0222610:intron | 35.0% | |
| TAAATGTACCAAACAAGGAG+GGG | - | chr2_1:71881228-71881247 | None:intergenic | 35.0% | |
| GTTAAATGTACCAAACAAGG+AGG | - | chr2_1:71881230-71881249 | None:intergenic | 35.0% | |
| AGCGTTAAATGTACCAAACA+AGG | - | chr2_1:71881233-71881252 | None:intergenic | 35.0% | |
| CGAAAGGATTTGAACACAAA+AGG | - | chr2_1:71881262-71881281 | None:intergenic | 35.0% | |
| TAAAACATAACAATGCTCGC+CGG | + | chr2_1:71881282-71881301 | Msa0222610:intron | 35.0% | |
| CCATCTTGAACTTATGCAAA+AGG | - | chr2_1:71881469-71881488 | None:intergenic | 35.0% | |
| ! | CCTTTTGCATAAGTTCAAGA+TGG | + | chr2_1:71881466-71881485 | Msa0222610:intron | 35.0% |
| TGTTGAGAGTTGGATTATTG+GGG | + | chr2_1:71881501-71881520 | Msa0222610:intron | 35.0% | |
| !! | GGTTTTGCGAAAGTATACAA+GGG | + | chr2_1:71881529-71881548 | Msa0222610:CDS | 35.0% |
| AGTATACAAGGGAGAGTTAA+TGG | + | chr2_1:71881540-71881559 | Msa0222610:CDS | 35.0% | |
| GAGAGACTTGAAATATGCAT+TGG | + | chr2_1:71881778-71881797 | Msa0222610:CDS | 35.0% | |
| TCATTACCTTCTTGCTAATG+CGG | + | chr2_1:71881816-71881835 | Msa0222610:CDS | 35.0% | |
| GATTTCAGATTGTCAGAAAC+CGG | + | chr2_1:71881901-71881920 | Msa0222610:CDS | 35.0% | |
| ACATGCATTTGATTGAGCTT+GGG | - | chr2_1:71881928-71881947 | None:intergenic | 35.0% | |
| AATGGTGAACTTAGCAGAAT+CGG | + | chr2_1:71882039-71882058 | Msa0222610:CDS | 35.0% | |
| AAATCAAGCCAGATTCTCTT+AGG | + | chr2_1:71882124-71882143 | Msa0222610:CDS | 35.0% | |
| AGAAACTGCTGAAAAATGCT+TGG | + | chr2_1:71882155-71882174 | Msa0222610:intron | 35.0% | |
| ACAAAGAAACATTTGCATCC+TGG | - | chr2_1:71882332-71882351 | None:intergenic | 35.0% | |
| ATGTATTGCAGTATTCTCAC+CGG | + | chr2_1:71882450-71882469 | Msa0222610:intron | 35.0% | |
| TTCTATGTTGTGAGAGACTA+TGG | - | chr2_1:71882688-71882707 | None:intergenic | 35.0% | |
| !! | AACAACTGTTTTTCCTGGAA+TGG | + | chr2_1:71883278-71883297 | Msa0222610:intron | 35.0% |
| !! | ACAACTGTTTTTCCTGGAAT+GGG | + | chr2_1:71883279-71883298 | Msa0222610:intron | 35.0% |
| ATATATTACGATCCCATTCC+AGG | - | chr2_1:71883294-71883313 | None:intergenic | 35.0% | |
| !! | GACTTGTTGATGAATCATGT+TGG | - | chr2_1:71883363-71883382 | None:intergenic | 35.0% |
| ACATGATTCATCAACAAGTC+CGG | + | chr2_1:71883363-71883382 | Msa0222610:intron | 35.0% | |
| TGATATGTTTGGATGTTCTC+TGG | + | chr2_1:71883481-71883500 | Msa0222610:intron | 35.0% | |
| !! | GCTGACTTGAATGAATTTGT+AGG | - | chr2_1:71883635-71883654 | None:intergenic | 35.0% |
| !!! | TTTTGATGATGATGGCAAGT+GGG | - | chr2_1:71883837-71883856 | None:intergenic | 35.0% |
| !!! | TGCTTGTGTTTTGATGATGA+TGG | - | chr2_1:71883845-71883864 | None:intergenic | 35.0% |
| ! | GTGCTTGACAAATTCTCTTT+TGG | + | chr2_1:71883895-71883914 | Msa0222610:intron | 35.0% |
| ! | AGTATTTTCCATGATAGGGA+TGG | - | chr2_1:71883955-71883974 | None:intergenic | 35.0% |
| ATAGCTAGTGCTACAAAGGT+TGG | - | chr2_1:71879672-71879691 | None:intergenic | 40.0% | |
| CTTCATAGCTAGTGCTACAA+AGG | - | chr2_1:71879676-71879695 | None:intergenic | 40.0% | |
| CTTCAATGTGAAATGCAGCA+CGG | - | chr2_1:71879865-71879884 | None:intergenic | 40.0% | |
| TGCATTTCACATTGAAGGTG+TGG | + | chr2_1:71879868-71879887 | Msa0222610:intron | 40.0% | |
| ! | TTTCACATTGAAGGTGTGGT+TGG | + | chr2_1:71879872-71879891 | Msa0222610:intron | 40.0% |
| ATTATAAACACACGGGGCTA+AGG | - | chr2_1:71880060-71880079 | None:intergenic | 40.0% | |
| ! | AGGCATAAATTAGGAAGTGC+AGG | - | chr2_1:71880117-71880136 | None:intergenic | 40.0% |
| AGCATTTATTGTCGTGCCAT+TGG | - | chr2_1:71881422-71881441 | None:intergenic | 40.0% | |
| AGAGTTGGATTATTGGGGTT+GGG | + | chr2_1:71881506-71881525 | Msa0222610:intron | 40.0% | |
| !! | GGGTTTTGCGAAAGTATACA+AGG | + | chr2_1:71881528-71881547 | Msa0222610:CDS | 40.0% |
| TACAAGGGAGAGTTAATGGA+TGG | + | chr2_1:71881544-71881563 | Msa0222610:CDS | 40.0% | |
| ! | GTTAATGGATGGCTGGAAAT+TGG | + | chr2_1:71881555-71881574 | Msa0222610:CDS | 40.0% |
| !! | TGGAAATTGGTAGTGAAGAG+AGG | + | chr2_1:71881568-71881587 | Msa0222610:CDS | 40.0% |
| !! | GGAAATTGGTAGTGAAGAGA+GGG | + | chr2_1:71881569-71881588 | Msa0222610:CDS | 40.0% |
| TAGTGAAGAGAGGGAATACA+CGG | + | chr2_1:71881578-71881597 | Msa0222610:CDS | 40.0% | |
| TCAATTTCAGTTCGAAACCC+TGG | - | chr2_1:71881609-71881628 | None:intergenic | 40.0% | |
| TCTCCTTCCAACTTAAGCTT+GGG | - | chr2_1:71881762-71881781 | None:intergenic | 40.0% | |
| ATATGCATTGGATCTGCTAG+AGG | + | chr2_1:71881790-71881809 | Msa0222610:CDS | 40.0% | |
| GAATAACCGCATTAGCAAGA+AGG | - | chr2_1:71881825-71881844 | None:intergenic | 40.0% | |
| ! | ATTTTGCAGACTTCACGTCA+CGG | - | chr2_1:71881849-71881868 | None:intergenic | 40.0% |
| CACATGCATTTGATTGAGCT+TGG | - | chr2_1:71881929-71881948 | None:intergenic | 40.0% | |
| AATCAAATGCATGTGAGCAC+AGG | + | chr2_1:71881934-71881953 | Msa0222610:intron | 40.0% | |
| TCATAGATCCATTGCTTCCT+AGG | + | chr2_1:71882014-71882033 | Msa0222610:CDS | 40.0% | |
| CATAGATCCATTGCTTCCTA+GGG | + | chr2_1:71882015-71882034 | Msa0222610:CDS | 40.0% | |
| AAGAATACATCTCCCACTGA+AGG | - | chr2_1:71882201-71882220 | None:intergenic | 40.0% | |
| ACAGCTTCTTGAAGTTGAAG+AGG | - | chr2_1:71882237-71882256 | None:intergenic | 40.0% | |
| CTTCAAGAAGCTGTTGTTCA+AGG | + | chr2_1:71882243-71882262 | Msa0222610:CDS | 40.0% | |
| CATTTGCATCCTGGTAGAAA+TGG | - | chr2_1:71882323-71882342 | None:intergenic | 40.0% | |
| TTCTTTGTCTGCTTCTAGTG+TGG | + | chr2_1:71882344-71882363 | Msa0222610:CDS | 40.0% | |
| TCTAGTGTGGATGATCTTTC+CGG | + | chr2_1:71882357-71882376 | Msa0222610:CDS | 40.0% | |
| ! | ATCTTTCCGGTGTTTCTAAG+AGG | + | chr2_1:71882370-71882389 | Msa0222610:CDS | 40.0% |
| ACGGCAATCATTTGAGAATG+TGG | - | chr2_1:71882636-71882655 | None:intergenic | 40.0% | |
| TGGTAATCAGAGATTTGCAC+TGG | + | chr2_1:71882765-71882784 | Msa0222610:intron | 40.0% | |
| ACACTAACACACACAGAAAC+AGG | - | chr2_1:71883093-71883112 | None:intergenic | 40.0% | |
| GAACATGTGATACATCATGC+AGG | + | chr2_1:71883703-71883722 | Msa0222610:intron | 40.0% | |
| !!! | GTTTTGATGATGATGGCAAG+TGG | - | chr2_1:71883838-71883857 | None:intergenic | 40.0% |
| ! | CCAGATTTAGAGCACTAAGA+AGG | - | chr2_1:71883929-71883948 | None:intergenic | 40.0% |
| ! | CCTTCTTAGTGCTCTAAATC+TGG | + | chr2_1:71883926-71883945 | Msa0222610:intron | 40.0% |
| ! | TCTTTTTGTGGAGTCAGTTG+TGG | + | chr2_1:71883985-71884004 | Msa0222610:intron | 40.0% |
| TTGTACAAGCCGGCTAAAAA+TGG | - | chr2_1:71884087-71884106 | None:intergenic | 40.0% | |
| GTAGCACTAGCTATGAAGCA+CGG | + | chr2_1:71879678-71879697 | Msa0222610:intron | 45.0% | |
| TGTGAAATGCAGCACGGATA+CGG | - | chr2_1:71879859-71879878 | None:intergenic | 45.0% | |
| CGTGCTGCATTTCACATTGA+AGG | + | chr2_1:71879863-71879882 | Msa0222610:intron | 45.0% | |
| TGAATTCGCACAAAGCTCAG+AGG | + | chr2_1:71880010-71880029 | Msa0222610:intron | 45.0% | |
| GGAAGAAGAACCAACAGTTG+AGG | + | chr2_1:71880533-71880552 | Msa0222610:intron | 45.0% | |
| AGGCATTCTACCTCAACTGT+TGG | - | chr2_1:71880546-71880565 | None:intergenic | 45.0% | |
| TTCTTGTCAATGGGAGAGTG+AGG | + | chr2_1:71880691-71880710 | Msa0222610:intron | 45.0% | |
| ! | GGAGAGTGAGGACTTTTCAT+CGG | + | chr2_1:71880703-71880722 | Msa0222610:intron | 45.0% |
| ! | TCATCGGCTGAAGTTGTGTT+TGG | + | chr2_1:71880719-71880738 | Msa0222610:intron | 45.0% |
| TGTCAGGGTAATGAGTGCAT+TGG | + | chr2_1:71881095-71881114 | Msa0222610:intron | 45.0% | |
| ! | GGTAATGAGTGCATTGGTCT+TGG | + | chr2_1:71881101-71881120 | Msa0222610:intron | 45.0% |
| AAATGCCAGCAACACGAAAG+CGG | + | chr2_1:71881152-71881171 | Msa0222610:intron | 45.0% | |
| TAGGAGGGGTAGGTGTAATT+AGG | - | chr2_1:71881195-71881214 | None:intergenic | 45.0% | |
| GCACAGTACACAACAAACTC+CGG | - | chr2_1:71881304-71881323 | None:intergenic | 45.0% | |
| !! | GAGTTTGTTGTGTACTGTGC+AGG | + | chr2_1:71881304-71881323 | Msa0222610:intron | 45.0% |
| GTTGTGTACTGTGCAGGAAA+AGG | + | chr2_1:71881310-71881329 | Msa0222610:intron | 45.0% | |
| GACAAAGGCAGTCAAAGACA+CGG | + | chr2_1:71881346-71881365 | Msa0222610:CDS | 45.0% | |
| GAGAGTTGGATTATTGGGGT+TGG | + | chr2_1:71881505-71881524 | Msa0222610:intron | 45.0% | |
| GAGTTGGATTATTGGGGTTG+GGG | + | chr2_1:71881507-71881526 | Msa0222610:intron | 45.0% | |
| AGTTGGATTATTGGGGTTGG+GGG | + | chr2_1:71881508-71881527 | Msa0222610:intron | 45.0% | |
| CGACATCTGGTGTCTTTGAT+TGG | + | chr2_1:71881651-71881670 | Msa0222610:intron | 45.0% | |
| AACTCTCAGAGTCGTCTACA+CGG | + | chr2_1:71881728-71881747 | Msa0222610:intron | 45.0% | |
| !! | ACTCCCAAGCTTAAGTTGGA+AGG | + | chr2_1:71881756-71881775 | Msa0222610:intron | 45.0% |
| CTCTCCTTCCAACTTAAGCT+TGG | - | chr2_1:71881763-71881782 | None:intergenic | 45.0% | |
| CATTTGATTGAGCTTGGGAC+CGG | - | chr2_1:71881923-71881942 | None:intergenic | 45.0% | |
| AGAACTACACCAAAGGATCG+AGG | - | chr2_1:71881980-71881999 | None:intergenic | 45.0% | |
| TGCACAGAGAACTACACCAA+AGG | - | chr2_1:71881987-71882006 | None:intergenic | 45.0% | |
| TTGGTGTAGTTCTCTGTGCA+AGG | + | chr2_1:71881987-71882006 | Msa0222610:CDS | 45.0% | |
| GGAAGCAATGGATCTATGAC+AGG | - | chr2_1:71882013-71882032 | None:intergenic | 45.0% | |
| TCCATTGCTTCCTAGGGAAA+TGG | + | chr2_1:71882021-71882040 | Msa0222610:CDS | 45.0% | |
| ACCATTTCCCTAGGAAGCAA+TGG | - | chr2_1:71882025-71882044 | None:intergenic | 45.0% | |
| GCTAAGTTCACCATTTCCCT+AGG | - | chr2_1:71882034-71882053 | None:intergenic | 45.0% | |
| GCAGACTTCCTAAGAGAATC+TGG | - | chr2_1:71882135-71882154 | None:intergenic | 45.0% | |
| ACAGGTCAACCATTTCTACC+AGG | + | chr2_1:71882311-71882330 | Msa0222610:CDS | 45.0% | |
| ! | TTTCCGGTGTTTCTAAGAGG+AGG | + | chr2_1:71882373-71882392 | Msa0222610:CDS | 45.0% |
| ! | TTCCGGTGTTTCTAAGAGGA+GGG | + | chr2_1:71882374-71882393 | Msa0222610:CDS | 45.0% |
| TACCCTCCTCTTAGAAACAC+CGG | - | chr2_1:71882379-71882398 | None:intergenic | 45.0% | |
| !! | GAGGAGGGTATTATCACAGT+TGG | + | chr2_1:71882389-71882408 | Msa0222610:intron | 45.0% |
| !! | ATCACAGTTGGTGAAGTCTG+AGG | + | chr2_1:71882401-71882420 | Msa0222610:intron | 45.0% |
| !! | TCACAGTTGGTGAAGTCTGA+GGG | + | chr2_1:71882402-71882421 | Msa0222610:intron | 45.0% |
| ! | CTTCACATTGAAGGTGTGTC+CGG | - | chr2_1:71882472-71882491 | None:intergenic | 45.0% |
| ! | GCACTGACACTTCACATTGA+AGG | - | chr2_1:71882481-71882500 | None:intergenic | 45.0% |
| ACGGGTTCAATGTGAAGTGT+CGG | - | chr2_1:71882544-71882563 | None:intergenic | 45.0% | |
| ATGTATTGGACACCTGACAC+GGG | - | chr2_1:71882562-71882581 | None:intergenic | 45.0% | |
| CATGTATTGGACACCTGACA+CGG | - | chr2_1:71882563-71882582 | None:intergenic | 45.0% | |
| GTCAGGTGTCCAATACATGA+CGG | + | chr2_1:71882564-71882583 | Msa0222610:intron | 45.0% | |
| TGTCCAATACATGACGGTGT+CGG | + | chr2_1:71882570-71882589 | Msa0222610:intron | 45.0% | |
| TGATTCATCAACAAGTCCGG+TGG | + | chr2_1:71883366-71883385 | Msa0222610:intron | 45.0% | |
| GGAGTTTCTGTTGTACAAGC+CGG | - | chr2_1:71884097-71884116 | None:intergenic | 45.0% | |
| !!! | TTTTGATTTTTTTTTTTTAA+AGG | + | chr2_1:71880411-71880430 | Msa0222610:intron | 5.0% |
| !! | AACAAAAAAATATATATTTA+GGG | - | chr2_1:71880994-71881013 | None:intergenic | 5.0% |
| !! | AAACAAAAAAATATATATTT+AGG | - | chr2_1:71880995-71881014 | None:intergenic | 5.0% |
| TGGAGAGAGCTACTGATCTG+AGG | - | chr2_1:71879652-71879671 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr2_1:71879689-71879708 | Msa0222610:intron | 50.0% | |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr2_1:71879756-71879775 | None:intergenic | 50.0% |
| ATAAACACACGGGGCTAAGG+TGG | - | chr2_1:71880057-71880076 | None:intergenic | 50.0% | |
| TGATAGCTGGTGTGAGTGTC+AGG | + | chr2_1:71881079-71881098 | Msa0222610:intron | 50.0% | |
| GATAGCTGGTGTGAGTGTCA+GGG | + | chr2_1:71881080-71881099 | Msa0222610:intron | 50.0% | |
| !! | ATGAGTGCATTGGTCTTGGC+TGG | + | chr2_1:71881105-71881124 | Msa0222610:intron | 50.0% |
| ATTCTCCGCTTTCGTGTTGC+TGG | - | chr2_1:71881160-71881179 | None:intergenic | 50.0% | |
| TAGGTGTAACTAGGAGGGGT+AGG | - | chr2_1:71881205-71881224 | None:intergenic | 50.0% | |
| AGGGGTAGGTGTAACTAGGA+GGG | - | chr2_1:71881210-71881229 | None:intergenic | 50.0% | |
| AAGGAGGGGTAGGTGTAACT+AGG | - | chr2_1:71881214-71881233 | None:intergenic | 50.0% | |
| TACACCTACCCCTCCTTGTT+TGG | + | chr2_1:71881217-71881236 | Msa0222610:intron | 50.0% | |
| TGTACCAAACAAGGAGGGGT+AGG | - | chr2_1:71881224-71881243 | None:intergenic | 50.0% | |
| GTGCAGGAAAAGGAAGTGAC+TGG | + | chr2_1:71881320-71881339 | Msa0222610:intron | 50.0% | |
| GGAAGTGACTGGCAAGACAA+AGG | + | chr2_1:71881331-71881350 | Msa0222610:CDS | 50.0% | |
| ! | AGGGAGAGTTAATGGATGGC+TGG | + | chr2_1:71881548-71881567 | Msa0222610:CDS | 50.0% |
| TCAAAGACACCAGATGTCGC+AGG | - | chr2_1:71881650-71881669 | None:intergenic | 50.0% | |
| !! | TTTTGGGTGCCTCGATCCTT+TGG | + | chr2_1:71881968-71881987 | Msa0222610:CDS | 50.0% |
| !! | TGGTGTTGACAAGCCTTCAG+TGG | + | chr2_1:71882185-71882204 | Msa0222610:CDS | 50.0% |
| !! | GGTGTTGACAAGCCTTCAGT+GGG | + | chr2_1:71882186-71882205 | Msa0222610:CDS | 50.0% |
| GATTGGCGAACTCTCTCAAC+AGG | + | chr2_1:71882293-71882312 | Msa0222610:CDS | 50.0% | |
| GTGAAGTCTGAGGGTAGATG+AGG | + | chr2_1:71882411-71882430 | Msa0222610:intron | 50.0% | |
| ! | GTGAAGTGTCAGTGCTACGT+AGG | + | chr2_1:71882486-71882505 | Msa0222610:intron | 50.0% |
| !! | GTGAAGTGTCGGTGCTACAT+AGG | - | chr2_1:71882533-71882552 | None:intergenic | 50.0% |
| CTTCACATTGAACCCGTGTC+AGG | + | chr2_1:71882547-71882566 | Msa0222610:intron | 50.0% | |
| TGTCCGACACCGTCATGTAT+TGG | - | chr2_1:71882576-71882595 | None:intergenic | 50.0% | |
| GCTGATATATGCAGCCTGCA+AGG | + | chr2_1:71883196-71883215 | Msa0222610:intron | 50.0% | |
| TATCACTCTTGCAGCCTTGC+AGG | - | chr2_1:71883213-71883232 | None:intergenic | 50.0% | |
| TCTGGTGTCCATCCCTATCA+TGG | + | chr2_1:71883944-71883963 | Msa0222610:intron | 50.0% | |
| ATGCAGCACGGATACGGACA+CGG | - | chr2_1:71879853-71879872 | None:intergenic | 55.0% | |
| GGGGTAGGTGTAACTAGGAG+GGG | - | chr2_1:71881209-71881228 | None:intergenic | 55.0% | |
| GAGGGGTAGGTGTAACTAGG+AGG | - | chr2_1:71881211-71881230 | None:intergenic | 55.0% | |
| AGGGAATACACGGTTGCACC+AGG | + | chr2_1:71881588-71881607 | Msa0222610:CDS | 55.0% | |
| GGGAATACACGGTTGCACCA+GGG | + | chr2_1:71881589-71881608 | Msa0222610:CDS | 55.0% | |
| TCAGTTCTGCCTGCGACATC+TGG | + | chr2_1:71881638-71881657 | Msa0222610:CDS | 55.0% | |
| CTCAGAGTCGTCTACACGGT+CGG | + | chr2_1:71881732-71881751 | Msa0222610:intron | 55.0% | |
| TCAGAGTCGTCTACACGGTC+GGG | + | chr2_1:71881733-71881752 | Msa0222610:intron | 55.0% | |
| CGGGACTCCCAAGCTTAAGT+TGG | + | chr2_1:71881752-71881771 | Msa0222610:intron | 55.0% | |
| ! | ACAGGCGCAAGGGGAGTTTT+GGG | + | chr2_1:71881952-71881971 | Msa0222610:intron | 55.0% |
| GTCATCGATACAGCACTCGC+AGG | + | chr2_1:71882100-71882119 | Msa0222610:CDS | 55.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr2_1:71879695-71879714 | Msa0222610:intron | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr2_1:71879705-71879724 | Msa0222610:intron | 60.0% |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr2_1:71879711-71879730 | Msa0222610:intron | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | - | chr2_1:71879727-71879746 | None:intergenic | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr2_1:71879824-71879843 | Msa0222610:intron | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | - | chr2_1:71879846-71879865 | None:intergenic | 60.0% | |
| TGCATGTGAGCACAGGCGCA+AGG | + | chr2_1:71881941-71881960 | Msa0222610:intron | 60.0% | |
| GCATGTGAGCACAGGCGCAA+GGG | + | chr2_1:71881942-71881961 | Msa0222610:intron | 60.0% | |
| CATGTGAGCACAGGCGCAAG+GGG | + | chr2_1:71881943-71881962 | Msa0222610:intron | 60.0% | |
| ! | CACAGGCGCAAGGGGAGTTT+TGG | + | chr2_1:71881951-71881970 | Msa0222610:intron | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr2_1:71879709-71879728 | None:intergenic | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | - | chr2_1:71879726-71879745 | None:intergenic | 65.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr2_1:71879835-71879854 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 71879583 | 71884130 | 71879583 | ID=Msa0222610;Name=Msa0222610 |
| chr2_1 | mRNA | 71879583 | 71884130 | 71879583 | ID=Msa0222610-mRNA-1;Parent=Msa0222610;Name=Msa0222610-mRNA-1;_AED=0.41;_eAED=0.48;_QI=0|0|0|0.85|0|0|7|0|319 |
| chr2_1 | exon | 71879583 | 71879589 | 71879583 | ID=Msa0222610-mRNA-1:exon:20740;Parent=Msa0222610-mRNA-1 |
| chr2_1 | exon | 71881326 | 71881462 | 71881326 | ID=Msa0222610-mRNA-1:exon:20741;Parent=Msa0222610-mRNA-1 |
| chr2_1 | exon | 71881510 | 71881661 | 71881510 | ID=Msa0222610-mRNA-1:exon:20742;Parent=Msa0222610-mRNA-1 |
| chr2_1 | exon | 71881771 | 71881945 | 71881771 | ID=Msa0222610-mRNA-1:exon:20743;Parent=Msa0222610-mRNA-1 |
| chr2_1 | exon | 71881956 | 71882148 | 71881956 | ID=Msa0222610-mRNA-1:exon:20744;Parent=Msa0222610-mRNA-1 |
| chr2_1 | exon | 71882157 | 71882395 | 71882157 | ID=Msa0222610-mRNA-1:exon:20745;Parent=Msa0222610-mRNA-1 |
| chr2_1 | exon | 71884074 | 71884130 | 71884074 | ID=Msa0222610-mRNA-1:exon:20746;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71879583 | 71879589 | 71879583 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71881326 | 71881462 | 71881326 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71881510 | 71881661 | 71881510 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71881771 | 71881945 | 71881771 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71881956 | 71882148 | 71881956 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71882157 | 71882395 | 71882157 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| chr2_1 | CDS | 71884074 | 71884130 | 71884074 | ID=Msa0222610-mRNA-1:cds;Parent=Msa0222610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
