Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224050 | XP_024633082.1 | 95.362 | 345 | 16 | 0 | 1 | 345 | 1 | 345 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224050 | sp|Q9LNP6|NFYA8_ARATH | 38.028 | 355 | 163 | 13 | 10 | 345 | 12 | 328 | 1.45e-51 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224050 | A0A396JG16 | 95.362 | 345 | 16 | 0 | 1 | 345 | 1 | 345 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0224050 | TF | NF-YA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224050 | MtrunA17_Chr2g0329811 | 95.362 | 345 | 16 | 0 | 1 | 345 | 1 | 345 | 0.0 | 661 |
| Msa0224050 | MtrunA17_Chr8g0343451 | 51.471 | 340 | 120 | 12 | 23 | 345 | 7 | 318 | 6.93e-85 | 259 |
| Msa0224050 | MtrunA17_Chr2g0300261 | 55.147 | 136 | 49 | 4 | 121 | 253 | 19 | 145 | 6.17e-40 | 140 |
| Msa0224050 | MtrunA17_Chr2g0292411 | 52.174 | 115 | 51 | 2 | 168 | 282 | 95 | 205 | 3.88e-33 | 122 |
| Msa0224050 | MtrunA17_Chr8g0352251 | 56.311 | 103 | 40 | 1 | 144 | 246 | 117 | 214 | 9.00e-31 | 118 |
| Msa0224050 | MtrunA17_Chr3g0103391 | 49.624 | 133 | 52 | 3 | 114 | 246 | 112 | 229 | 1.22e-30 | 118 |
| Msa0224050 | MtrunA17_Chr7g0267581 | 51.000 | 100 | 40 | 3 | 147 | 246 | 136 | 226 | 3.75e-24 | 100 |
| Msa0224050 | MtrunA17_Chr1g0177091 | 41.844 | 141 | 67 | 4 | 108 | 245 | 95 | 223 | 4.84e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224050 | AT1G17590.3 | 38.028 | 355 | 163 | 13 | 10 | 345 | 12 | 328 | 1.48e-52 | 177 |
| Msa0224050 | AT1G17590.2 | 38.028 | 355 | 163 | 13 | 10 | 345 | 12 | 328 | 1.48e-52 | 177 |
| Msa0224050 | AT1G17590.4 | 38.028 | 355 | 163 | 13 | 10 | 345 | 12 | 328 | 1.48e-52 | 177 |
| Msa0224050 | AT1G17590.1 | 38.028 | 355 | 163 | 13 | 10 | 345 | 12 | 328 | 1.48e-52 | 177 |
| Msa0224050 | AT1G72830.1 | 36.826 | 334 | 169 | 11 | 2 | 318 | 4 | 312 | 1.68e-49 | 169 |
| Msa0224050 | AT1G72830.2 | 36.716 | 335 | 169 | 12 | 2 | 318 | 4 | 313 | 9.18e-48 | 164 |
| Msa0224050 | AT1G54160.1 | 38.281 | 256 | 107 | 8 | 22 | 250 | 11 | 242 | 1.06e-39 | 142 |
| Msa0224050 | AT3G14020.2 | 37.690 | 329 | 134 | 16 | 20 | 318 | 13 | 300 | 1.70e-39 | 142 |
| Msa0224050 | AT3G14020.1 | 37.690 | 329 | 134 | 16 | 20 | 318 | 13 | 300 | 1.70e-39 | 142 |
| Msa0224050 | AT1G72830.3 | 34.535 | 333 | 153 | 11 | 2 | 318 | 4 | 287 | 8.43e-38 | 137 |
| Msa0224050 | AT1G30500.2 | 51.938 | 129 | 58 | 2 | 130 | 254 | 40 | 168 | 1.08e-36 | 131 |
| Msa0224050 | AT1G30500.1 | 52.381 | 126 | 58 | 2 | 130 | 254 | 40 | 164 | 2.06e-36 | 130 |
| Msa0224050 | AT2G34720.1 | 51.613 | 124 | 51 | 3 | 123 | 246 | 44 | 158 | 6.82e-33 | 121 |
| Msa0224050 | AT2G34720.2 | 52.941 | 119 | 47 | 3 | 128 | 246 | 14 | 123 | 1.65e-31 | 117 |
| Msa0224050 | AT2G34720.3 | 52.941 | 119 | 47 | 3 | 128 | 246 | 14 | 123 | 1.65e-31 | 117 |
| Msa0224050 | AT3G20910.1 | 45.926 | 135 | 59 | 4 | 117 | 251 | 111 | 231 | 1.51e-29 | 115 |
| Msa0224050 | AT5G12840.5 | 47.015 | 134 | 55 | 4 | 116 | 248 | 116 | 234 | 6.73e-29 | 113 |
| Msa0224050 | AT5G12840.3 | 47.015 | 134 | 55 | 4 | 116 | 248 | 116 | 234 | 6.73e-29 | 113 |
| Msa0224050 | AT5G12840.1 | 47.015 | 134 | 55 | 4 | 116 | 248 | 116 | 234 | 6.73e-29 | 113 |
| Msa0224050 | AT5G12840.4 | 47.015 | 134 | 55 | 4 | 116 | 248 | 115 | 233 | 6.93e-29 | 113 |
| Msa0224050 | AT5G12840.2 | 47.015 | 134 | 55 | 4 | 116 | 248 | 115 | 233 | 6.93e-29 | 113 |
| Msa0224050 | AT5G06510.4 | 48.214 | 112 | 46 | 4 | 149 | 259 | 9 | 109 | 5.49e-24 | 97.1 |
| Msa0224050 | AT5G06510.7 | 48.214 | 112 | 46 | 4 | 149 | 259 | 9 | 109 | 5.49e-24 | 97.1 |
| Msa0224050 | AT5G06510.1 | 47.788 | 113 | 47 | 4 | 149 | 260 | 104 | 205 | 1.40e-23 | 98.6 |
| Msa0224050 | AT5G06510.5 | 47.788 | 113 | 47 | 4 | 149 | 260 | 104 | 205 | 1.40e-23 | 98.6 |
| Msa0224050 | AT5G06510.2 | 47.788 | 113 | 47 | 4 | 149 | 260 | 104 | 205 | 1.40e-23 | 98.6 |
| Msa0224050 | AT5G06510.6 | 47.788 | 113 | 47 | 4 | 149 | 260 | 104 | 205 | 1.40e-23 | 98.6 |
| Msa0224050 | AT5G06510.3 | 47.788 | 113 | 47 | 4 | 149 | 260 | 55 | 156 | 2.46e-23 | 96.7 |
| Msa0224050 | AT3G05690.1 | 37.500 | 168 | 86 | 6 | 85 | 245 | 44 | 199 | 7.05e-20 | 89.0 |
| Msa0224050 | AT3G05690.2 | 37.500 | 168 | 86 | 6 | 85 | 245 | 81 | 236 | 9.40e-20 | 89.0 |
Find 111 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTTGAATTCACATATA+TGG | 0.180422 | 2_1:-73765591 | None:intergenic |
| CACTTTGAAGCTCAAACTTT+TGG | 0.192638 | 2_1:-73763928 | None:intergenic |
| AAGAGAGACACCTTGGAAAT+TGG | 0.211241 | 2_1:-73762800 | None:intergenic |
| TTCAACCTGATCATGCATTT+TGG | 0.229189 | 2_1:-73765946 | None:intergenic |
| GCGAATCAAGCTTTGATTCT+TGG | 0.254868 | 2_1:-73765857 | None:intergenic |
| TTCATATGGCCAACAATATA+AGG | 0.305273 | 2_1:+73765027 | Msa0224050:CDS |
| TATAGCTGGTGGAAACATTT+TGG | 0.306979 | 2_1:-73765890 | None:intergenic |
| GAGAACCGAGGAGAACAATA+TGG | 0.321909 | 2_1:+73764786 | Msa0224050:CDS |
| AAATTCTGACCAGCTTCTTC+AGG | 0.334629 | 2_1:+73765508 | Msa0224050:CDS |
| CTCATCGAATCATCATCTAT+TGG | 0.336945 | 2_1:+73764814 | Msa0224050:CDS |
| TGCTTTGAATTCACATATAT+GGG | 0.338735 | 2_1:-73765590 | None:intergenic |
| TTCCAGCATTGTTCTTCTAC+TGG | 0.343547 | 2_1:+73764751 | Msa0224050:CDS |
| GGAGGATGGACGGTGAGATT+TGG | 0.358180 | 2_1:-73764841 | None:intergenic |
| AATTCCCTTGCCATCTGATA+TGG | 0.360890 | 2_1:+73765559 | Msa0224050:CDS |
| GCTTCTTCAGGGCCAGCTAA+TGG | 0.362306 | 2_1:+73765520 | Msa0224050:CDS |
| GGCCTACTTTCTGCTTCATA+TGG | 0.362322 | 2_1:+73765013 | Msa0224050:CDS |
| CACCGTCCATCCTCCACTAA+TGG | 0.364359 | 2_1:+73764849 | Msa0224050:CDS |
| TATTGTGTAGCCTATTGTTT+AGG | 0.371376 | 2_1:+73766331 | Msa0224050:three_prime_UTR |
| TATACTTGTTTGAATTTGAA+TGG | 0.374199 | 2_1:+73765909 | Msa0224050:CDS |
| TATCAGATGGCAAGGGAATT+CGG | 0.376992 | 2_1:-73765556 | None:intergenic |
| GACTTCCCAATGTTAGAGAT+TGG | 0.383747 | 2_1:-73766240 | None:intergenic |
| TACAAATTACCTTATATTGT+TGG | 0.397767 | 2_1:-73765036 | None:intergenic |
| AGAGAGACACCTTGGAAATT+GGG | 0.399599 | 2_1:-73762799 | None:intergenic |
| TCATCGAATCATCATCTATT+GGG | 0.410536 | 2_1:+73764815 | Msa0224050:CDS |
| CAGAAGCAGTTTCCATTAGC+TGG | 0.410914 | 2_1:-73765532 | None:intergenic |
| TGTCGGGACTCGTGAAGATA+TGG | 0.413042 | 2_1:-73765774 | None:intergenic |
| GTCGTTGGATTGAGATTGGC+AGG | 0.414168 | 2_1:+73766526 | Msa0224050:three_prime_UTR |
| TATATCTGCTTACAAGTGAT+TGG | 0.427209 | 2_1:-73764879 | None:intergenic |
| AGCACATAACAAACTCATAA+AGG | 0.430383 | 2_1:+73765658 | Msa0224050:CDS |
| CGTAGTCGTTGGATTGAGAT+TGG | 0.431388 | 2_1:+73766522 | Msa0224050:three_prime_UTR |
| TGTTCTCCAATCTCTAACAT+TGG | 0.432650 | 2_1:+73766234 | Msa0224050:three_prime_UTR |
| TTGATTTGATGTATATTGTA+TGG | 0.437662 | 2_1:+73766474 | Msa0224050:three_prime_UTR |
| GAGACCAAGTACAACGCAAC+GGG | 0.451752 | 2_1:+73762527 | None:intergenic |
| TGAAATGTTTCAGCAGCAAC+AGG | 0.453392 | 2_1:+73766016 | Msa0224050:CDS |
| ATGTCACATACGGATCTCAT+AGG | 0.460134 | 2_1:+73765991 | Msa0224050:CDS |
| GTTCTCCAATCTCTAACATT+GGG | 0.460774 | 2_1:+73766235 | Msa0224050:three_prime_UTR |
| TTCCTTCCAGTCTGAGAAGA+AGG | 0.473570 | 2_1:-73766065 | None:intergenic |
| AATTCTGACCAGCTTCTTCA+GGG | 0.474643 | 2_1:+73765509 | Msa0224050:CDS |
| AGCAACAGGAGTTAGAGTTC+AGG | 0.485902 | 2_1:+73766030 | Msa0224050:CDS |
| TGATTTGATGTATATTGTAT+GGG | 0.488338 | 2_1:+73766475 | Msa0224050:three_prime_UTR |
| CAAATTCAAACAAGTATAGC+TGG | 0.488784 | 2_1:-73765904 | None:intergenic |
| GAATTTGAATGGAAATATGT+CGG | 0.489962 | 2_1:+73765920 | Msa0224050:CDS |
| GGAATCCAAAATGCATGATC+AGG | 0.490416 | 2_1:+73765941 | Msa0224050:CDS |
| CTTTAATGCATGTACATGTC+GGG | 0.500813 | 2_1:-73765790 | None:intergenic |
| TCGACTGGCTCATCACAATC+AGG | 0.502357 | 2_1:+73764029 | Msa0224050:CDS |
| GAAAGTAGGCCATTGTAGCC+TGG | 0.505229 | 2_1:-73765001 | None:intergenic |
| AACCAGTAGAAGAACAATGC+TGG | 0.515161 | 2_1:-73764753 | None:intergenic |
| TATGAGGCGAAGACAGTGTC+GGG | 0.515554 | 2_1:+73765625 | Msa0224050:CDS |
| GCACTCCACTATGCTGATCC+AGG | 0.517924 | 2_1:+73764983 | Msa0224050:CDS |
| TCAGAAGATCTTCCCCATGA+TGG | 0.517971 | 2_1:-73763879 | None:intergenic |
| AGCAGTACCATGCTATTATG+AGG | 0.519657 | 2_1:+73765609 | Msa0224050:CDS |
| TCTTTAATGCATGTACATGT+CGG | 0.521057 | 2_1:-73765791 | None:intergenic |
| TGGAGAACACAATCAAATAG+TGG | 0.522439 | 2_1:-73766220 | None:intergenic |
| TAACATTGGGAAGTCATCCT+TGG | 0.524651 | 2_1:+73766248 | Msa0224050:three_prime_UTR |
| AGAACCGAGGAGAACAATAT+GGG | 0.525995 | 2_1:+73764787 | Msa0224050:CDS |
| AACTCAGTGCTTTACTGTTG+TGG | 0.539967 | 2_1:-73763971 | None:intergenic |
| TAGATTGACATAAGAGTGGT+GGG | 0.542716 | 2_1:-73762667 | None:intergenic |
| AGCATTGAGAAAACGGCCAC+CGG | 0.542799 | 2_1:-73765826 | None:intergenic |
| TGTGACTCTATCGTAGTCGT+TGG | 0.542828 | 2_1:+73766511 | Msa0224050:three_prime_UTR |
| ACATCCCATATTGTTCTCCT+CGG | 0.546379 | 2_1:-73764791 | None:intergenic |
| TGGATTGAGATTGGCAGGGA+CGG | 0.550298 | 2_1:+73766531 | Msa0224050:three_prime_UTR |
| CAAAAGTTTGAGCTTCAAAG+TGG | 0.551748 | 2_1:+73763929 | Msa0224050:CDS |
| TTCCGCCATATCAGATGGCA+AGG | 0.552797 | 2_1:-73765564 | None:intergenic |
| TTAGCTGGCCCTGAAGAAGC+TGG | 0.554264 | 2_1:-73765517 | None:intergenic |
| GTAGAAGAACAATGCTGGAA+AGG | 0.555226 | 2_1:-73764748 | None:intergenic |
| TTAAAGAGAGCTAGAGGTGC+CGG | 0.556911 | 2_1:+73765807 | Msa0224050:CDS |
| CTAAATCCACCCAATTTCCA+AGG | 0.559695 | 2_1:+73762790 | Msa0224050:five_prime_UTR |
| TCATCTTCAACTCAATCGAC+TGG | 0.564458 | 2_1:+73764014 | Msa0224050:CDS |
| GAAACTGTGCATGTGTTTAG+TGG | 0.564613 | 2_1:-73762759 | None:intergenic |
| AAACTGTGCATGTGTTTAGT+GGG | 0.565424 | 2_1:-73762758 | None:intergenic |
| GATTGGCTGTGATCCATTAG+TGG | 0.569834 | 2_1:-73764862 | None:intergenic |
| ACCCTTCTTCTCAGACTGGA+AGG | 0.577435 | 2_1:+73766063 | Msa0224050:CDS |
| CTCACATGCGGACGGATAGT+CGG | 0.579968 | 2_1:-73766133 | None:intergenic |
| TGTAGCCTGGATCAGCATAG+TGG | 0.581932 | 2_1:-73764988 | None:intergenic |
| ATGATGGACATCCGAAAACA+TGG | 0.581989 | 2_1:-73763863 | None:intergenic |
| GATGCTTCTGATGTCACATA+CGG | 0.584773 | 2_1:+73765981 | Msa0224050:CDS |
| TATGCTGATCCAGGCTACAA+TGG | 0.586886 | 2_1:+73764992 | Msa0224050:CDS |
| GGTTCTTCCGCCATATCAGA+TGG | 0.587888 | 2_1:-73765569 | None:intergenic |
| GAGACACCTTGGAAATTGGG+TGG | 0.604945 | 2_1:-73762796 | None:intergenic |
| TCCCTTGCCATCTGATATGG+CGG | 0.605293 | 2_1:+73765562 | Msa0224050:CDS |
| AGTTACCCTTCTTCTCAGAC+TGG | 0.606122 | 2_1:+73766059 | Msa0224050:CDS |
| ATTCAAACAAGTATAGCTGG+TGG | 0.610080 | 2_1:-73765901 | None:intergenic |
| GGCCATATGAAGCAGAAAGT+AGG | 0.615452 | 2_1:-73765015 | None:intergenic |
| TACAAAGCTGACAAGAATGT+TGG | 0.616527 | 2_1:+73766098 | Msa0224050:CDS |
| GATTTGATGTATATTGTATG+GGG | 0.618950 | 2_1:+73766476 | Msa0224050:three_prime_UTR |
| TTATGAGGCGAAGACAGTGT+CGG | 0.619331 | 2_1:+73765624 | Msa0224050:CDS |
| ATAGATTGACATAAGAGTGG+TGG | 0.625247 | 2_1:-73762668 | None:intergenic |
| ACATAAGTAAATATGAGCCA+AGG | 0.627513 | 2_1:-73766265 | None:intergenic |
| ATCCATTAGTGGAGGATGGA+CGG | 0.629213 | 2_1:-73764851 | None:intergenic |
| TTACTGTTGTGGCATCCTTG+TGG | 0.631295 | 2_1:-73763960 | None:intergenic |
| AGAGACCAAGTACAACGCAA+CGG | 0.633643 | 2_1:+73762526 | None:intergenic |
| ACAAGTCTCTCACATGCGGA+CGG | 0.640777 | 2_1:-73766141 | None:intergenic |
| GTCTTCGCCTCATAATAGCA+TGG | 0.641090 | 2_1:-73765616 | None:intergenic |
| TCCTTCCAGTCTGAGAAGAA+GGG | 0.646710 | 2_1:-73766064 | None:intergenic |
| GTCATAGATTGACATAAGAG+TGG | 0.646950 | 2_1:-73762671 | None:intergenic |
| CATGCATTAAAGAGAGCTAG+AGG | 0.647089 | 2_1:+73765801 | Msa0224050:CDS |
| TTCTACAAGTCTCTCACATG+CGG | 0.648923 | 2_1:-73766145 | None:intergenic |
| TGTGATCCATTAGTGGAGGA+TGG | 0.649182 | 2_1:-73764855 | None:intergenic |
| TGTAGAACACATCATTGTGG+TGG | 0.651381 | 2_1:+73766161 | Msa0224050:three_prime_UTR |
| ACAACAAATAAAGTCACACT+AGG | 0.653661 | 2_1:-73766412 | None:intergenic |
| ATGGACATCCGAAAACATGG+TGG | 0.675905 | 2_1:-73763860 | None:intergenic |
| TCGTTGGATTGAGATTGGCA+GGG | 0.677474 | 2_1:+73766527 | Msa0224050:three_prime_UTR |
| TCCGCCATATCAGATGGCAA+GGG | 0.679431 | 2_1:-73765563 | None:intergenic |
| AAGAGAGCTAGAGGTGCCGG+TGG | 0.680129 | 2_1:+73765810 | Msa0224050:CDS |
| TTCAACATTTAAGAGAACCG+AGG | 0.691304 | 2_1:+73764774 | Msa0224050:CDS |
| AGATTGACATAAGAGTGGTG+GGG | 0.695152 | 2_1:-73762666 | None:intergenic |
| TGGCTGTGATCCATTAGTGG+AGG | 0.701564 | 2_1:-73764859 | None:intergenic |
| AAAGTGGAAGCTCTACCACA+AGG | 0.704797 | 2_1:+73763945 | Msa0224050:CDS |
| TGGACATCCGAAAACATGGT+GGG | 0.707024 | 2_1:-73763859 | None:intergenic |
| AACTGTGCATGTGTTTAGTG+GGG | 0.711077 | 2_1:-73762757 | None:intergenic |
| ACTTGTAGAACACATCATTG+TGG | 0.726366 | 2_1:+73766158 | Msa0224050:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTCATTTTATTTGTA+AGG | + | chr2_1:73763766-73763785 | Msa0224050:intron | 10.0% |
| !! | TAAGAAAAACTTAAATTATA+TGG | - | chr2_1:73764444-73764463 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTTCTTATAAAAT+TGG | + | chr2_1:73764450-73764469 | Msa0224050:intron | 10.0% |
| !!! | TTTTTTATCTCTTTTAATTA+CGG | + | chr2_1:73765066-73765085 | Msa0224050:intron | 10.0% |
| !! | AGAAAAAAGACAATTTAATT+TGG | - | chr2_1:73763135-73763154 | None:intergenic | 15.0% |
| !!! | TCTATTTCTTAAATTATTAC+TGG | + | chr2_1:73764265-73764284 | Msa0224050:intron | 15.0% |
| !!! | TATTTACAAGTTTTTTTTGA+AGG | - | chr2_1:73765192-73765211 | None:intergenic | 15.0% |
| !!! | AATTATTTTGATTTCTTATG+AGG | + | chr2_1:73765401-73765420 | Msa0224050:intron | 15.0% |
| !!! | CAATGATGAAGTTTTTATAT+TGG | + | chr2_1:73762604-73762623 | Msa0224050:five_prime_UTR | 20.0% |
| !!! | AAAAGTGTTAAACTTCAATT+GGG | + | chr2_1:73763033-73763052 | Msa0224050:intron | 20.0% |
| !! | AATTCAATTGCAAAATAAAG+AGG | - | chr2_1:73763307-73763326 | None:intergenic | 20.0% |
| !! | ATAGTTTCTTGTATGAATAA+TGG | + | chr2_1:73763376-73763395 | Msa0224050:intron | 20.0% |
| !! | TTATATTGATATTACCAAAC+TGG | - | chr2_1:73763614-73763633 | None:intergenic | 20.0% |
| !!! | TAATTCAAAATACGAACTTT+TGG | - | chr2_1:73763676-73763695 | None:intergenic | 20.0% |
| !!! | CATTTTATTTGTAAGGTAAA+TGG | + | chr2_1:73763773-73763792 | Msa0224050:intron | 20.0% |
| !!! | TTCTCATTTTGTTATGTTAT+TGG | + | chr2_1:73764103-73764122 | Msa0224050:intron | 20.0% |
| !! | TATATATATCTATGTTCTAG+TGG | + | chr2_1:73764898-73764917 | Msa0224050:intron | 20.0% |
| !! | TACAAATTACCTTATATTGT+TGG | - | chr2_1:73765039-73765058 | None:intergenic | 20.0% |
| !! | AAAACTTGTAAATAGATGTT+AGG | + | chr2_1:73765198-73765217 | Msa0224050:intron | 20.0% |
| !! | TATACTTGTTTGAATTTGAA+TGG | + | chr2_1:73765909-73765928 | Msa0224050:CDS | 20.0% |
| !!! | TTGATTTGATGTATATTGTA+TGG | + | chr2_1:73766474-73766493 | Msa0224050:three_prime_UTR | 20.0% |
| !! | TGATTTGATGTATATTGTAT+GGG | + | chr2_1:73766475-73766494 | Msa0224050:three_prime_UTR | 20.0% |
| !! | GTCATGAAATTTCAAGTAAA+GGG | - | chr2_1:73762878-73762897 | None:intergenic | 25.0% |
| !! | TGTCATGAAATTTCAAGTAA+AGG | - | chr2_1:73762879-73762898 | None:intergenic | 25.0% |
| !!! | GAATTTTTAGCTTAAGATGA+TGG | + | chr2_1:73762923-73762942 | Msa0224050:intron | 25.0% |
| !!! | GAAAAGTGTTAAACTTCAAT+TGG | + | chr2_1:73763032-73763051 | Msa0224050:intron | 25.0% |
| ! | TACAAATGAATGAAAACCTA+AGG | - | chr2_1:73763067-73763086 | None:intergenic | 25.0% |
| ! | AGACAATGAAATGTTTAAAC+AGG | - | chr2_1:73763238-73763257 | None:intergenic | 25.0% |
| !! | TTTCTTGTATGAATAATGGA+GGG | + | chr2_1:73763380-73763399 | Msa0224050:intron | 25.0% |
| ! | GAAAAGTCTCTATCATTAAT+TGG | - | chr2_1:73763468-73763487 | None:intergenic | 25.0% |
| ! | CAATATAATGTTCCTTTATG+TGG | + | chr2_1:73763626-73763645 | Msa0224050:intron | 25.0% |
| ! | CTATATATTGGTAAAAGCTA+TGG | + | chr2_1:73764414-73764433 | Msa0224050:intron | 25.0% |
| ! | AAATTGGAATTTGTCTTAGA+TGG | + | chr2_1:73764466-73764485 | Msa0224050:intron | 25.0% |
| ! | TGCTGAATTACTTAATTTAG+TGG | + | chr2_1:73764671-73764690 | Msa0224050:intron | 25.0% |
| ! | AGTGCAAATACTAATCAAAT+GGG | - | chr2_1:73764706-73764725 | None:intergenic | 25.0% |
| !! | AGACACTTTTCTCAAAATTT+TGG | + | chr2_1:73764944-73764963 | Msa0224050:intron | 25.0% |
| !! | GACACTTTTCTCAAAATTTT+GGG | + | chr2_1:73764945-73764964 | Msa0224050:intron | 25.0% |
| ! | TAATATCAATATCAACATGC+TGG | - | chr2_1:73765116-73765135 | None:intergenic | 25.0% |
| !! | TCAATTTTCAGTCATAACTA+TGG | - | chr2_1:73765449-73765468 | None:intergenic | 25.0% |
| !! | TGCTTTGAATTCACATATAT+GGG | - | chr2_1:73765593-73765612 | None:intergenic | 25.0% |
| ! | GAATTTGAATGGAAATATGT+CGG | + | chr2_1:73765920-73765939 | Msa0224050:CDS | 25.0% |
| ! | GATTTGATGTATATTGTATG+GGG | + | chr2_1:73766476-73766495 | Msa0224050:three_prime_UTR | 25.0% |
| AAAATAAAAGAGAGACACCT+TGG | - | chr2_1:73762810-73762829 | None:intergenic | 30.0% | |
| CTGTTCTGTTTGTATATTCT+TGG | + | chr2_1:73762972-73762991 | Msa0224050:intron | 30.0% | |
| TATAGTAAGCTTTCCATTTC+AGG | + | chr2_1:73763006-73763025 | Msa0224050:intron | 30.0% | |
| ACACATGGAATAAACTCAAT+TGG | - | chr2_1:73763098-73763117 | None:intergenic | 30.0% | |
| GTATATAAGCAAAAGACACA+TGG | - | chr2_1:73763113-73763132 | None:intergenic | 30.0% | |
| !!! | TACCTTTTTTGCACCAATAA+TGG | + | chr2_1:73763163-73763182 | Msa0224050:intron | 30.0% |
| TTCCATTATTGGTGCAAAAA+AGG | - | chr2_1:73763168-73763187 | None:intergenic | 30.0% | |
| ! | CCTTCTCTTATTTCCATTAT+TGG | - | chr2_1:73763179-73763198 | None:intergenic | 30.0% |
| ! | CCAATAATGGAAATAAGAGA+AGG | + | chr2_1:73763176-73763195 | Msa0224050:intron | 30.0% |
| GTTTCTTGTATGAATAATGG+AGG | + | chr2_1:73763379-73763398 | Msa0224050:intron | 30.0% | |
| AATTGGAAGAACTTTCATAG+AGG | - | chr2_1:73763451-73763470 | None:intergenic | 30.0% | |
| ! | AGACTTTTCTTTTTATGACG+AGG | + | chr2_1:73763479-73763498 | Msa0224050:intron | 30.0% |
| TATTTCTTTCTTGTCCAGTT+TGG | + | chr2_1:73763597-73763616 | Msa0224050:intron | 30.0% | |
| AACATAAGCATACCACATAA+AGG | - | chr2_1:73763641-73763660 | None:intergenic | 30.0% | |
| ! | GAGTTTTCAATTTCAAGAAC+AGG | + | chr2_1:73763989-73764008 | Msa0224050:CDS | 30.0% |
| TACTACTGCAGTTTCTTAAT+AGG | - | chr2_1:73764140-73764159 | None:intergenic | 30.0% | |
| !! | ACACCTTTAATTTGAAGTGT+CGG | - | chr2_1:73764181-73764200 | None:intergenic | 30.0% |
| ! | ATCGTTGATGGGAAAATAAA+TGG | + | chr2_1:73764571-73764590 | Msa0224050:intron | 30.0% |
| TTGATGGGAAAATAAATGGT+TGG | + | chr2_1:73764575-73764594 | Msa0224050:intron | 30.0% | |
| TGCAAATACTAATCAAATGG+GGG | - | chr2_1:73764704-73764723 | None:intergenic | 30.0% | |
| GTGCAAATACTAATCAAATG+GGG | - | chr2_1:73764705-73764724 | None:intergenic | 30.0% | |
| CAGTGCAAATACTAATCAAA+TGG | - | chr2_1:73764707-73764726 | None:intergenic | 30.0% | |
| TCATCGAATCATCATCTATT+GGG | + | chr2_1:73764815-73764834 | Msa0224050:CDS | 30.0% | |
| TATATCTGCTTACAAGTGAT+TGG | - | chr2_1:73764882-73764901 | None:intergenic | 30.0% | |
| TATATCTATGTTCTAGTGGA+TGG | + | chr2_1:73764902-73764921 | Msa0224050:intron | 30.0% | |
| !!! | TTCTCAAAATTTTGGGTTTC+AGG | + | chr2_1:73764952-73764971 | Msa0224050:intron | 30.0% |
| TTCATATGGCCAACAATATA+AGG | + | chr2_1:73765027-73765046 | Msa0224050:CDS | 30.0% | |
| CCATTTAGAGGAACAAATTA+AGG | - | chr2_1:73765257-73765276 | None:intergenic | 30.0% | |
| !! | CCTTAATTTGTTCCTCTAAA+TGG | + | chr2_1:73765254-73765273 | Msa0224050:intron | 30.0% |
| ATGATTTATGAAAGCCGTAA+AGG | - | chr2_1:73765317-73765336 | None:intergenic | 30.0% | |
| ! | CTGCTTTGAATTCACATATA+TGG | - | chr2_1:73765594-73765613 | None:intergenic | 30.0% |
| AGCACATAACAAACTCATAA+AGG | + | chr2_1:73765658-73765677 | Msa0224050:CDS | 30.0% | |
| TCTTTAATGCATGTACATGT+CGG | - | chr2_1:73765794-73765813 | None:intergenic | 30.0% | |
| !! | GCTTTTTAGCATTGAGAAAA+CGG | - | chr2_1:73765836-73765855 | None:intergenic | 30.0% |
| CAAATTCAAACAAGTATAGC+TGG | - | chr2_1:73765907-73765926 | None:intergenic | 30.0% | |
| ACATAAGTAAATATGAGCCA+AGG | - | chr2_1:73766268-73766287 | None:intergenic | 30.0% | |
| TATTGTGTAGCCTATTGTTT+AGG | + | chr2_1:73766331-73766350 | Msa0224050:three_prime_UTR | 30.0% | |
| !!! | GTGTTTTTTGCCTAAACAAT+AGG | - | chr2_1:73766344-73766363 | None:intergenic | 30.0% |
| ! | TGCTTTTCTAAGTTTAATGC+TGG | + | chr2_1:73766387-73766406 | Msa0224050:three_prime_UTR | 30.0% |
| ACAACAAATAAAGTCACACT+AGG | - | chr2_1:73766415-73766434 | None:intergenic | 30.0% | |
| ATTCAAAAAACTCGGTTCTT+CGG | - | chr2_1:73766443-73766462 | None:intergenic | 30.0% | |
| TGTGTCGAATTCAAAAAACT+CGG | - | chr2_1:73766451-73766470 | None:intergenic | 30.0% | |
| TAGATTGACATAAGAGTGGT+GGG | - | chr2_1:73762670-73762689 | None:intergenic | 35.0% | |
| ATAGATTGACATAAGAGTGG+TGG | - | chr2_1:73762671-73762690 | None:intergenic | 35.0% | |
| GTCATAGATTGACATAAGAG+TGG | - | chr2_1:73762674-73762693 | None:intergenic | 35.0% | |
| AAACTGTGCATGTGTTTAGT+GGG | - | chr2_1:73762761-73762780 | None:intergenic | 35.0% | |
| ! | AACACTTTTCCTACCTGAAA+TGG | - | chr2_1:73763022-73763041 | None:intergenic | 35.0% |
| CAATTGGGAAAGAATTCCTT+AGG | + | chr2_1:73763048-73763067 | Msa0224050:intron | 35.0% | |
| TGGATTAACATTTCAACCCT+TGG | - | chr2_1:73763415-73763434 | None:intergenic | 35.0% | |
| AGGGTTGAAATGTTAATCCA+TGG | + | chr2_1:73763415-73763434 | Msa0224050:intron | 35.0% | |
| GAAGAACTTTCATAGAGGAT+TGG | - | chr2_1:73763446-73763465 | None:intergenic | 35.0% | |
| TTATGACGAGGAATCAAACT+CGG | + | chr2_1:73763491-73763510 | Msa0224050:intron | 35.0% | |
| TAAGTGATTGTTGTAAACCC+GGG | - | chr2_1:73763520-73763539 | None:intergenic | 35.0% | |
| GTAAGTGATTGTTGTAAACC+CGG | - | chr2_1:73763521-73763540 | None:intergenic | 35.0% | |
| AAGATACTGCAACGATAATC+TGG | + | chr2_1:73763695-73763714 | Msa0224050:intron | 35.0% | |
| !!! | ATCTAGCTACTGCTTTTTCA+TGG | - | chr2_1:73763728-73763747 | None:intergenic | 35.0% |
| AAAAAGCAGTAGCTAGATCT+AGG | + | chr2_1:73763730-73763749 | Msa0224050:intron | 35.0% | |
| ! | TTTTGGACATGGATGTTTGT+TGG | - | chr2_1:73763914-73763933 | None:intergenic | 35.0% |
| !!! | CACTTTGAAGCTCAAACTTT+TGG | - | chr2_1:73763931-73763950 | None:intergenic | 35.0% |
| CAAAAGTTTGAGCTTCAAAG+TGG | + | chr2_1:73763929-73763948 | Msa0224050:CDS | 35.0% | |
| !! | CTTCAAATTAAAGGTGTCTC+CGG | + | chr2_1:73764184-73764203 | Msa0224050:intron | 35.0% |
| TCGAATGTAACTATGTGAGT+CGG | - | chr2_1:73764240-73764259 | None:intergenic | 35.0% | |
| !! | CTGTTCTTCATAGCTTTTTC+TGG | + | chr2_1:73764318-73764337 | Msa0224050:intron | 35.0% |
| ATTATGTAAACCTACCTCCT+TGG | + | chr2_1:73764381-73764400 | Msa0224050:intron | 35.0% | |
| AGTTATGAAGTAACGTGTCA+AGG | - | chr2_1:73764513-73764532 | None:intergenic | 35.0% | |
| CAAGATATCTCATCGTTGAT+GGG | + | chr2_1:73764560-73764579 | Msa0224050:intron | 35.0% | |
| ACACATACACAGCAGATAAT+GGG | - | chr2_1:73764613-73764632 | None:intergenic | 35.0% | |
| TACACATACACAGCAGATAA+TGG | - | chr2_1:73764614-73764633 | None:intergenic | 35.0% | |
| GATTAGTATTTGCACTGTGT+TGG | + | chr2_1:73764710-73764729 | Msa0224050:intron | 35.0% | |
| TTCAACATTTAAGAGAACCG+AGG | + | chr2_1:73764774-73764793 | Msa0224050:CDS | 35.0% | |
| CTCATCGAATCATCATCTAT+TGG | + | chr2_1:73764814-73764833 | Msa0224050:CDS | 35.0% | |
| TGATTGAACAGTCCATTTAG+AGG | - | chr2_1:73765269-73765288 | None:intergenic | 35.0% | |
| ! | TTGCATATATTTGAGACCAG+AGG | + | chr2_1:73765360-73765379 | Msa0224050:intron | 35.0% |
| ! | TGCATATATTTGAGACCAGA+GGG | + | chr2_1:73765361-73765380 | Msa0224050:intron | 35.0% |
| AACAATATTGTTAGTGCGGT+TGG | - | chr2_1:73765748-73765767 | None:intergenic | 35.0% | |
| GCACAACAATATTGTTAGTG+CGG | - | chr2_1:73765752-73765771 | None:intergenic | 35.0% | |
| CTTTAATGCATGTACATGTC+GGG | - | chr2_1:73765793-73765812 | None:intergenic | 35.0% | |
| !! | GAAACATTTTGGTCATGGTT+TGG | - | chr2_1:73765882-73765901 | None:intergenic | 35.0% |
| ! | TATAGCTGGTGGAAACATTT+TGG | - | chr2_1:73765893-73765912 | None:intergenic | 35.0% |
| ATTCAAACAAGTATAGCTGG+TGG | - | chr2_1:73765904-73765923 | None:intergenic | 35.0% | |
| ! | TTCAACCTGATCATGCATTT+TGG | - | chr2_1:73765949-73765968 | None:intergenic | 35.0% |
| TACAAAGCTGACAAGAATGT+TGG | + | chr2_1:73766098-73766117 | Msa0224050:CDS | 35.0% | |
| ACTTGTAGAACACATCATTG+TGG | + | chr2_1:73766158-73766177 | Msa0224050:three_prime_UTR | 35.0% | |
| TGGAGAACACAATCAAATAG+TGG | - | chr2_1:73766223-73766242 | None:intergenic | 35.0% | |
| TGTTCTCCAATCTCTAACAT+TGG | + | chr2_1:73766234-73766253 | Msa0224050:three_prime_UTR | 35.0% | |
| GTTCTCCAATCTCTAACATT+GGG | + | chr2_1:73766235-73766254 | Msa0224050:three_prime_UTR | 35.0% | |
| AGATTGACATAAGAGTGGTG+GGG | - | chr2_1:73762669-73762688 | None:intergenic | 40.0% | |
| AACTGTGCATGTGTTTAGTG+GGG | - | chr2_1:73762760-73762779 | None:intergenic | 40.0% | |
| GAAACTGTGCATGTGTTTAG+TGG | - | chr2_1:73762762-73762781 | None:intergenic | 40.0% | |
| CTAAATCCACCCAATTTCCA+AGG | + | chr2_1:73762790-73762809 | Msa0224050:five_prime_UTR | 40.0% | |
| AGAGAGACACCTTGGAAATT+GGG | - | chr2_1:73762802-73762821 | None:intergenic | 40.0% | |
| AAGAGAGACACCTTGGAAAT+TGG | - | chr2_1:73762803-73762822 | None:intergenic | 40.0% | |
| ! | GTAAGCTTTCCATTTCAGGT+AGG | + | chr2_1:73763010-73763029 | Msa0224050:intron | 40.0% |
| AAGTGATTGTTGTAAACCCG+GGG | - | chr2_1:73763519-73763538 | None:intergenic | 40.0% | |
| ! | TCAACATCCCACCATGTTTT+CGG | + | chr2_1:73763852-73763871 | Msa0224050:CDS | 40.0% |
| !! | ATGATGGACATCCGAAAACA+TGG | - | chr2_1:73763866-73763885 | None:intergenic | 40.0% |
| ! | ATGTTTTCGGATGTCCATCA+TGG | + | chr2_1:73763865-73763884 | Msa0224050:CDS | 40.0% |
| ! | TGTTTTCGGATGTCCATCAT+GGG | + | chr2_1:73763866-73763885 | Msa0224050:CDS | 40.0% |
| ! | GAAGCTCAAACTTTTGGACA+TGG | - | chr2_1:73763925-73763944 | None:intergenic | 40.0% |
| AACTCAGTGCTTTACTGTTG+TGG | - | chr2_1:73763974-73763993 | None:intergenic | 40.0% | |
| TCATCTTCAACTCAATCGAC+TGG | + | chr2_1:73764014-73764033 | Msa0224050:CDS | 40.0% | |
| AAAACACCAGTTGACAAGCA+CGG | - | chr2_1:73764085-73764104 | None:intergenic | 40.0% | |
| ! | GCACCGACACTTCAAATTAA+AGG | + | chr2_1:73764175-73764194 | Msa0224050:intron | 40.0% |
| AGACATCCATACACAGACAA+CGG | - | chr2_1:73764300-73764319 | None:intergenic | 40.0% | |
| TATATAGCCAGTGCTAACCA+AGG | - | chr2_1:73764401-73764420 | None:intergenic | 40.0% | |
| !! | GGTTAGCACTGGCTATATAT+TGG | + | chr2_1:73764402-73764421 | Msa0224050:intron | 40.0% |
| GCAAGATATCTCATCGTTGA+TGG | + | chr2_1:73764559-73764578 | Msa0224050:intron | 40.0% | |
| TTTGCACTGTGTTGGATACT+AGG | + | chr2_1:73764718-73764737 | Msa0224050:intron | 40.0% | |
| GTAGAAGAACAATGCTGGAA+AGG | - | chr2_1:73764751-73764770 | None:intergenic | 40.0% | |
| TTCCAGCATTGTTCTTCTAC+TGG | + | chr2_1:73764751-73764770 | Msa0224050:CDS | 40.0% | |
| AACCAGTAGAAGAACAATGC+TGG | - | chr2_1:73764756-73764775 | None:intergenic | 40.0% | |
| AGAACCGAGGAGAACAATAT+GGG | + | chr2_1:73764787-73764806 | Msa0224050:CDS | 40.0% | |
| ACATCCCATATTGTTCTCCT+CGG | - | chr2_1:73764794-73764813 | None:intergenic | 40.0% | |
| ! | TGTTCTAGTGGATGGAAGTA+TGG | + | chr2_1:73764910-73764929 | Msa0224050:intron | 40.0% |
| TCAATATCAACATGCTGGAG+TGG | - | chr2_1:73765111-73765130 | None:intergenic | 40.0% | |
| TGTCGATGTCTAGTCCTTTA+CGG | + | chr2_1:73765300-73765319 | Msa0224050:intron | 40.0% | |
| ! | TGACACTTGTTGCTAGTTAC+AGG | + | chr2_1:73765466-73765485 | Msa0224050:intron | 40.0% |
| AAATTCTGACCAGCTTCTTC+AGG | + | chr2_1:73765508-73765527 | Msa0224050:CDS | 40.0% | |
| AATTCTGACCAGCTTCTTCA+GGG | + | chr2_1:73765509-73765528 | Msa0224050:CDS | 40.0% | |
| TATCAGATGGCAAGGGAATT+CGG | - | chr2_1:73765559-73765578 | None:intergenic | 40.0% | |
| AATTCCCTTGCCATCTGATA+TGG | + | chr2_1:73765559-73765578 | Msa0224050:CDS | 40.0% | |
| AGCAGTACCATGCTATTATG+AGG | + | chr2_1:73765609-73765628 | Msa0224050:CDS | 40.0% | |
| CATGCATTAAAGAGAGCTAG+AGG | + | chr2_1:73765801-73765820 | Msa0224050:CDS | 40.0% | |
| ! | GCGAATCAAGCTTTGATTCT+TGG | - | chr2_1:73765860-73765879 | None:intergenic | 40.0% |
| !! | TGGTGGAAACATTTTGGTCA+TGG | - | chr2_1:73765887-73765906 | None:intergenic | 40.0% |
| GGAATCCAAAATGCATGATC+AGG | + | chr2_1:73765941-73765960 | Msa0224050:CDS | 40.0% | |
| GATGCTTCTGATGTCACATA+CGG | + | chr2_1:73765981-73766000 | Msa0224050:CDS | 40.0% | |
| ATGTCACATACGGATCTCAT+AGG | + | chr2_1:73765991-73766010 | Msa0224050:CDS | 40.0% | |
| TGAAATGTTTCAGCAGCAAC+AGG | + | chr2_1:73766016-73766035 | Msa0224050:CDS | 40.0% | |
| TTCTACAAGTCTCTCACATG+CGG | - | chr2_1:73766148-73766167 | None:intergenic | 40.0% | |
| TGTAGAACACATCATTGTGG+TGG | + | chr2_1:73766161-73766180 | Msa0224050:three_prime_UTR | 40.0% | |
| GACTTCCCAATGTTAGAGAT+TGG | - | chr2_1:73766243-73766262 | None:intergenic | 40.0% | |
| TAACATTGGGAAGTCATCCT+TGG | + | chr2_1:73766248-73766267 | Msa0224050:three_prime_UTR | 40.0% | |
| !! | ATGGAGGGTAAGTTGATCCA+AGG | + | chr2_1:73763395-73763414 | Msa0224050:intron | 45.0% |
| !! | TGGAGGGTAAGTTGATCCAA+GGG | + | chr2_1:73763396-73763415 | Msa0224050:intron | 45.0% |
| ATAGAGGATTGGACGAACCA+TGG | - | chr2_1:73763435-73763454 | None:intergenic | 45.0% | |
| CAATCACTTACGCTAGACCA+CGG | + | chr2_1:73763530-73763549 | Msa0224050:intron | 45.0% | |
| TACTGCAACGATAATCTGGC+AGG | + | chr2_1:73763699-73763718 | Msa0224050:intron | 45.0% | |
| TGGACATCCGAAAACATGGT+GGG | - | chr2_1:73763862-73763881 | None:intergenic | 45.0% | |
| ATGGACATCCGAAAACATGG+TGG | - | chr2_1:73763863-73763882 | None:intergenic | 45.0% | |
| ! | GTTTTCGGATGTCCATCATG+GGG | + | chr2_1:73763867-73763886 | Msa0224050:CDS | 45.0% |
| TCAGAAGATCTTCCCCATGA+TGG | - | chr2_1:73763882-73763901 | None:intergenic | 45.0% | |
| AAAGTGGAAGCTCTACCACA+AGG | + | chr2_1:73763945-73763964 | Msa0224050:CDS | 45.0% | |
| TTACTGTTGTGGCATCCTTG+TGG | - | chr2_1:73763963-73763982 | None:intergenic | 45.0% | |
| CATACACAGACAACGGACAT+TGG | - | chr2_1:73764293-73764312 | None:intergenic | 45.0% | |
| CAATGTCCGTTGTCTGTGTA+TGG | + | chr2_1:73764291-73764310 | Msa0224050:intron | 45.0% | |
| ATACTAATCAAATGGGGGCG+TGG | - | chr2_1:73764699-73764718 | None:intergenic | 45.0% | |
| GAGAACCGAGGAGAACAATA+TGG | + | chr2_1:73764786-73764805 | Msa0224050:CDS | 45.0% | |
| ATCCATTAGTGGAGGATGGA+CGG | - | chr2_1:73764854-73764873 | None:intergenic | 45.0% | |
| TGTGATCCATTAGTGGAGGA+TGG | - | chr2_1:73764858-73764877 | None:intergenic | 45.0% | |
| ! | GATTGGCTGTGATCCATTAG+TGG | - | chr2_1:73764865-73764884 | None:intergenic | 45.0% |
| TATGCTGATCCAGGCTACAA+TGG | + | chr2_1:73764992-73765011 | Msa0224050:CDS | 45.0% | |
| GGCCTACTTTCTGCTTCATA+TGG | + | chr2_1:73765013-73765032 | Msa0224050:CDS | 45.0% | |
| GGCCATATGAAGCAGAAAGT+AGG | - | chr2_1:73765018-73765037 | None:intergenic | 45.0% | |
| CAACATGCTGGAGTGGAATA+CGG | - | chr2_1:73765104-73765123 | None:intergenic | 45.0% | |
| TTAGGAGTAGATGTTGCAGC+TGG | + | chr2_1:73765216-73765235 | Msa0224050:intron | 45.0% | |
| CAGAAGCAGTTTCCATTAGC+TGG | - | chr2_1:73765535-73765554 | None:intergenic | 45.0% | |
| GTCTTCGCCTCATAATAGCA+TGG | - | chr2_1:73765619-73765638 | None:intergenic | 45.0% | |
| TTATGAGGCGAAGACAGTGT+CGG | + | chr2_1:73765624-73765643 | Msa0224050:CDS | 45.0% | |
| ! | TTAAAGAGAGCTAGAGGTGC+CGG | + | chr2_1:73765807-73765826 | Msa0224050:CDS | 45.0% |
| AGCAACAGGAGTTAGAGTTC+AGG | + | chr2_1:73766030-73766049 | Msa0224050:CDS | 45.0% | |
| AGTTACCCTTCTTCTCAGAC+TGG | + | chr2_1:73766059-73766078 | Msa0224050:CDS | 45.0% | |
| TCCTTCCAGTCTGAGAAGAA+GGG | - | chr2_1:73766067-73766086 | None:intergenic | 45.0% | |
| TTCCTTCCAGTCTGAGAAGA+AGG | - | chr2_1:73766068-73766087 | None:intergenic | 45.0% | |
| TGTGACTCTATCGTAGTCGT+TGG | + | chr2_1:73766511-73766530 | Msa0224050:three_prime_UTR | 45.0% | |
| CGTAGTCGTTGGATTGAGAT+TGG | + | chr2_1:73766522-73766541 | Msa0224050:three_prime_UTR | 45.0% | |
| TCGTTGGATTGAGATTGGCA+GGG | + | chr2_1:73766527-73766546 | Msa0224050:three_prime_UTR | 45.0% | |
| !!! | ATAATTCATTAAATTTTAAA+AGG | - | chr2_1:73765155-73765174 | None:intergenic | 5.0% |
| GAGACACCTTGGAAATTGGG+TGG | - | chr2_1:73762799-73762818 | None:intergenic | 50.0% | |
| ! | TCGACTGGCTCATCACAATC+AGG | + | chr2_1:73764029-73764048 | Msa0224050:CDS | 50.0% |
| GTGATTCCGTGCTTGTCAAC+TGG | + | chr2_1:73764076-73764095 | Msa0224050:intron | 50.0% | |
| CACTAACACGTGTCTCACAC+CGG | - | chr2_1:73764206-73764225 | None:intergenic | 50.0% | |
| AGACACGTGTTAGTGTCCGA+AGG | + | chr2_1:73764211-73764230 | Msa0224050:intron | 50.0% | |
| ! | CTATGTGAGTCGGTGTCCTT+CGG | - | chr2_1:73764230-73764249 | None:intergenic | 50.0% |
| ATAGCCAGTGCTAACCAAGG+AGG | - | chr2_1:73764398-73764417 | None:intergenic | 50.0% | |
| TGGCTGTGATCCATTAGTGG+AGG | - | chr2_1:73764862-73764881 | None:intergenic | 50.0% | |
| TGTAGCCTGGATCAGCATAG+TGG | - | chr2_1:73764991-73765010 | None:intergenic | 50.0% | |
| GAAAGTAGGCCATTGTAGCC+TGG | - | chr2_1:73765004-73765023 | None:intergenic | 50.0% | |
| CTAGACATCGACAGAGAGCA+CGG | - | chr2_1:73765293-73765312 | None:intergenic | 50.0% | |
| AGCTGAACTAGTAGTCCCTC+TGG | - | chr2_1:73765379-73765398 | None:intergenic | 50.0% | |
| TCCCTTGCCATCTGATATGG+CGG | + | chr2_1:73765562-73765581 | Msa0224050:CDS | 50.0% | |
| TCCGCCATATCAGATGGCAA+GGG | - | chr2_1:73765566-73765585 | None:intergenic | 50.0% | |
| TTCCGCCATATCAGATGGCA+AGG | - | chr2_1:73765567-73765586 | None:intergenic | 50.0% | |
| GGTTCTTCCGCCATATCAGA+TGG | - | chr2_1:73765572-73765591 | None:intergenic | 50.0% | |
| TATGAGGCGAAGACAGTGTC+GGG | + | chr2_1:73765625-73765644 | Msa0224050:CDS | 50.0% | |
| TGTCGGGACTCGTGAAGATA+TGG | - | chr2_1:73765777-73765796 | None:intergenic | 50.0% | |
| ! | AGCATTGAGAAAACGGCCAC+CGG | - | chr2_1:73765829-73765848 | None:intergenic | 50.0% |
| ACCCTTCTTCTCAGACTGGA+AGG | + | chr2_1:73766063-73766082 | Msa0224050:CDS | 50.0% | |
| ACAAGTCTCTCACATGCGGA+CGG | - | chr2_1:73766144-73766163 | None:intergenic | 50.0% | |
| GTCGTTGGATTGAGATTGGC+AGG | + | chr2_1:73766526-73766545 | Msa0224050:three_prime_UTR | 50.0% | |
| TGGATTGAGATTGGCAGGGA+CGG | + | chr2_1:73766531-73766550 | Msa0224050:three_prime_UTR | 50.0% | |
| !! | AGGAATCAAACTCGGTGCCC+CGG | + | chr2_1:73763499-73763518 | Msa0224050:intron | 55.0% |
| TCACTTACGCTAGACCACGG+TGG | + | chr2_1:73763533-73763552 | Msa0224050:intron | 55.0% | |
| CTAGACCACGGTGGTACTCA+CGG | + | chr2_1:73763542-73763561 | Msa0224050:intron | 55.0% | |
| TAGACCACGGTGGTACTCAC+GGG | + | chr2_1:73763543-73763562 | Msa0224050:intron | 55.0% | |
| CCAGTGCTAACCAAGGAGGT+AGG | - | chr2_1:73764394-73764413 | None:intergenic | 55.0% | |
| CCTACCTCCTTGGTTAGCAC+TGG | + | chr2_1:73764391-73764410 | Msa0224050:intron | 55.0% | |
| GGAGGATGGACGGTGAGATT+TGG | - | chr2_1:73764844-73764863 | None:intergenic | 55.0% | |
| CACCGTCCATCCTCCACTAA+TGG | + | chr2_1:73764849-73764868 | Msa0224050:CDS | 55.0% | |
| GCACTCCACTATGCTGATCC+AGG | + | chr2_1:73764983-73765002 | Msa0224050:CDS | 55.0% | |
| TTAGCTGGCCCTGAAGAAGC+TGG | - | chr2_1:73765520-73765539 | None:intergenic | 55.0% | |
| GCTTCTTCAGGGCCAGCTAA+TGG | + | chr2_1:73765520-73765539 | Msa0224050:CDS | 55.0% | |
| CTCACATGCGGACGGATAGT+CGG | - | chr2_1:73766136-73766155 | None:intergenic | 55.0% | |
| !! | GGAATCAAACTCGGTGCCCC+GGG | + | chr2_1:73763500-73763519 | Msa0224050:intron | 60.0% |
| !! | AAGAGAGCTAGAGGTGCCGG+TGG | + | chr2_1:73765810-73765829 | Msa0224050:CDS | 60.0% |
| ACCACGGTGGTACTCACGGG+AGG | + | chr2_1:73763546-73763565 | Msa0224050:intron | 65.0% | |
| TCCTCCCGTGAGTACCACCG+TGG | - | chr2_1:73763550-73763569 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73762541 | 73766576 | 73762541 | ID=Msa0224050;Name=Msa0224050 |
| chr2_1 | mRNA | 73762541 | 73766576 | 73762541 | ID=Msa0224050-mRNA-1;Parent=Msa0224050;Name=Msa0224050-mRNA-1;_AED=0.23;_eAED=0.23;_QI=302|1|1|1|0.8|0.66|6|422|345 |
| chr2_1 | exon | 73762541 | 73762811 | 73762541 | ID=Msa0224050-mRNA-1:exon:21692;Parent=Msa0224050-mRNA-1 |
| chr2_1 | exon | 73763788 | 73764050 | 73763788 | ID=Msa0224050-mRNA-1:exon:21693;Parent=Msa0224050-mRNA-1 |
| chr2_1 | exon | 73764740 | 73764888 | 73764740 | ID=Msa0224050-mRNA-1:exon:21694;Parent=Msa0224050-mRNA-1 |
| chr2_1 | exon | 73764974 | 73765048 | 73764974 | ID=Msa0224050-mRNA-1:exon:21695;Parent=Msa0224050-mRNA-1 |
| chr2_1 | exon | 73765488 | 73765688 | 73765488 | ID=Msa0224050-mRNA-1:exon:21696;Parent=Msa0224050-mRNA-1 |
| chr2_1 | exon | 73765774 | 73766576 | 73765774 | ID=Msa0224050-mRNA-1:exon:21697;Parent=Msa0224050-mRNA-1 |
| chr2_1 | five_prime_UTR | 73762541 | 73762811 | 73762541 | ID=Msa0224050-mRNA-1:five_prime_utr;Parent=Msa0224050-mRNA-1 |
| chr2_1 | five_prime_UTR | 73763788 | 73763818 | 73763788 | ID=Msa0224050-mRNA-1:five_prime_utr;Parent=Msa0224050-mRNA-1 |
| chr2_1 | CDS | 73763819 | 73764050 | 73763819 | ID=Msa0224050-mRNA-1:cds;Parent=Msa0224050-mRNA-1 |
| chr2_1 | CDS | 73764740 | 73764888 | 73764740 | ID=Msa0224050-mRNA-1:cds;Parent=Msa0224050-mRNA-1 |
| chr2_1 | CDS | 73764974 | 73765048 | 73764974 | ID=Msa0224050-mRNA-1:cds;Parent=Msa0224050-mRNA-1 |
| chr2_1 | CDS | 73765488 | 73765688 | 73765488 | ID=Msa0224050-mRNA-1:cds;Parent=Msa0224050-mRNA-1 |
| chr2_1 | CDS | 73765774 | 73766154 | 73765774 | ID=Msa0224050-mRNA-1:cds;Parent=Msa0224050-mRNA-1 |
| chr2_1 | three_prime_UTR | 73766155 | 73766576 | 73766155 | ID=Msa0224050-mRNA-1:three_prime_utr;Parent=Msa0224050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
