AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0224890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224890 MtrunA17_Chr2g0331131 98.445 836 8 2 1 831 1 836 0.0 1699
Msa0224890 MtrunA17_Chr8g0340411 89.008 837 81 6 1 831 1 832 0.0 1548
Msa0224890 MtrunA17_Chr3g0140351 81.699 836 138 7 3 831 8 835 0.0 1426
Msa0224890 MtrunA17_Chr2g0292391 67.904 835 248 11 10 831 9 836 0.0 1156
Msa0224890 MtrunA17_Chr4g0028991 65.264 832 270 7 10 831 24 846 0.0 1117
Msa0224890 MtrunA17_Chr2g0326731 61.916 835 287 11 12 831 21 839 0.0 1044
Msa0224890 MtrunA17_Chr2g0331581 21.524 525 323 18 15 477 143 640 2.97e-19 93.2
Msa0224890 MtrunA17_Chr8g0350321 21.730 497 291 18 203 666 375 806 4.17e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224890 AT1G52150.1 84.625 839 116 7 1 831 3 836 0.0 1471
Msa0224890 AT1G52150.2 84.267 839 120 6 1 831 3 837 0.0 1470
Msa0224890 AT1G52150.3 84.324 791 111 7 1 783 3 788 0.0 1373
Msa0224890 AT4G32880.1 77.470 830 172 9 10 831 11 833 0.0 1335
Msa0224890 AT2G34710.1 65.435 839 266 13 10 831 21 852 0.0 1106
Msa0224890 AT5G60690.1 64.354 836 266 10 12 831 23 842 0.0 1080
Msa0224890 AT1G30490.1 63.227 843 271 13 10 831 17 841 0.0 1074
Msa0224890 AT5G32670.1 64.865 74 26 0 283 356 37 110 1.51e-25 105
Msa0224890 AT1G79840.2 23.017 643 375 27 6 588 125 707 9.27e-22 101
Msa0224890 AT1G79840.3 23.017 643 375 27 6 588 38 620 1.10e-21 101
Msa0224890 AT1G79840.6 23.017 643 375 27 6 588 38 620 1.10e-21 101
Msa0224890 AT1G79840.1 23.017 643 375 27 6 588 96 678 1.37e-21 100
Msa0224890 AT1G79840.4 23.327 523 325 20 6 477 96 593 8.72e-21 98.2
Msa0224890 AT1G79840.5 23.885 381 237 12 6 345 96 464 5.10e-16 82.4
Msa0224890 AT1G05230.3 22.651 415 236 15 203 588 300 658 1.24e-11 68.9

Find 265 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACTAGTACCTTCTATTT+TGG 0.149695 2_1:+74941652 None:intergenic
CGTATCATTCCTCTTGATTC+TGG 0.153416 2_1:-74936339 Msa0224890:CDS
TTGCATCCCTTGGCGGATGC+TGG 0.201294 2_1:+74940964 None:intergenic
GGATCTCGGGTTGGAAATTA+TGG 0.220133 2_1:-74938413 Msa0224890:CDS
TTCGTCGTCAACAGCTTATT+CGG 0.220782 2_1:-74941725 Msa0224890:CDS
ATGATATGCACTTTGTAATC+TGG 0.251987 2_1:-74933968 Msa0224890:three_prime_UTR
TTCATCACCTGACAAATTAA+TGG 0.260446 2_1:-74939140 Msa0224890:CDS
TTCTTCACTGTCTCTTCTTT+AGG 0.260714 2_1:-74941993 Msa0224890:five_prime_UTR
CGAGCAAGTGTTTGAGCTTC+AGG 0.260912 2_1:+74935903 None:intergenic
AACAAAGCTTCTAATGATTC+TGG 0.262342 2_1:-74936119 Msa0224890:CDS
CGAATCACAGCTTGTATCTT+TGG 0.263868 2_1:+74941019 None:intergenic
GTTTCTGGAAGTCATTAAAT+TGG 0.266386 2_1:-74938261 Msa0224890:CDS
ATCATTAGAAGCTTTGTTTC+CGG 0.268858 2_1:+74936124 None:intergenic
TCTCATTTGGTGTATGAAAA+TGG 0.275958 2_1:-74941212 Msa0224890:CDS
AAGAACGGCACAAAATTATA+AGG 0.278291 2_1:+74934007 None:intergenic
CATTGTTGATCATATGGATT+TGG 0.289894 2_1:-74939742 Msa0224890:CDS
TCAAGAGCTTCAACTTGTTC+AGG 0.292799 2_1:+74941783 None:intergenic
ATACTAACCGGCTTAGTCTT+TGG 0.297731 2_1:+74939327 None:intergenic
TCTAGGCATTATCGCGTCTT+CGG 0.303913 2_1:+74938220 None:intergenic
CTCCTTCACAAGGCCTTATC+AGG 0.319184 2_1:+74939781 None:intergenic
CATCCACATTGTTGATCATA+TGG 0.320194 2_1:-74939748 Msa0224890:CDS
ACTACTCTTTCATATGAAAT+AGG 0.321200 2_1:+74934253 None:intergenic
TTACCTTCATTCCAGGCATT+TGG 0.333732 2_1:+74940743 None:intergenic
GGTGTTGTTGTTAATGTTGT+TGG 0.333835 2_1:+74942325 None:intergenic
GTTGGTCCTTGTAGTTTCTC+TGG 0.340294 2_1:-74938434 Msa0224890:CDS
TCAGGTCAAGGGTGCGATTT+GGG 0.342028 2_1:+74936171 None:intergenic
TCTAATGATTCTGGAAGTTC+TGG 0.343626 2_1:-74936110 Msa0224890:CDS
TGGCTCCTGCTCGAGACTTA+TGG 0.347028 2_1:-74940109 Msa0224890:CDS
GCTTGTGAATTCAAATTAGA+AGG 0.347776 2_1:+74935951 None:intergenic
GGTAAAGGTGTAATGGATAA+TGG 0.351251 2_1:-74941825 Msa0224890:CDS
AACCTAAACAGATCAAAGTT+TGG 0.353061 2_1:-74941677 Msa0224890:CDS
TTTGCTTTATGTTTGTGAAC+TGG 0.355987 2_1:-74934189 Msa0224890:CDS
CTAGGCATTATCGCGTCTTC+GGG 0.356154 2_1:+74938221 None:intergenic
TTCATCTTATAATTGGAATC+TGG 0.356739 2_1:-74941923 Msa0224890:five_prime_UTR
CTGACATCTGCCCTTGATAT+TGG 0.360765 2_1:-74936152 Msa0224890:CDS
AATTAGATTACCTTCATTCC+AGG 0.362016 2_1:+74940736 None:intergenic
TGACATTGTTAATAGACAAT+AGG 0.362083 2_1:-74934157 Msa0224890:three_prime_UTR
GCAAGACCATGTAGCATCTA+TGG 0.368008 2_1:-74936033 Msa0224890:intron
CTTGTAGTTTCTCTGGATCT+CGG 0.369189 2_1:-74938427 Msa0224890:CDS
GTTGGATCAGCAACAGTTAT+AGG 0.370148 2_1:-74935881 Msa0224890:intron
CATACCTGTTGTATAATTAG+AGG 0.371276 2_1:+74935132 None:intergenic
AACCAAACTTTGATCTGTTT+AGG 0.380939 2_1:+74941675 None:intergenic
TTCAGACCCATTAATTTGTC+AGG 0.382426 2_1:+74939133 None:intergenic
GTCAGGTCAAGGGTGCGATT+TGG 0.385595 2_1:+74936170 None:intergenic
TGCATCCCTTGGCGGATGCT+GGG 0.387641 2_1:+74940965 None:intergenic
ATGGGTCTGAATCTTTCATT+TGG 0.392816 2_1:-74939121 Msa0224890:CDS
TGCTGCACAGGAGGCATGCT+TGG 0.395041 2_1:+74939837 None:intergenic
CAGCCTGGTCCGGAATCTAT+TGG 0.406439 2_1:-74940513 Msa0224890:CDS
AAGTTTGGTTCCAAAATAGA+AGG 0.406689 2_1:-74941662 Msa0224890:intron
GATCTCGGGTTGGAAATTAT+GGG 0.407310 2_1:-74938412 Msa0224890:CDS
GCTATTATGTCTTGCAAAGA+TGG 0.408051 2_1:-74941846 Msa0224890:exon
GAGTTTCTTTCAAAGGCTAC+TGG 0.411427 2_1:-74940784 Msa0224890:CDS
AAGGGTGCGATTTGGGTTGT+TGG 0.416553 2_1:+74936178 None:intergenic
ATTTCCTCTAATTATACAAC+AGG 0.421279 2_1:-74935136 Msa0224890:intron
GTATCATTCCTCTTGATTCT+GGG 0.423470 2_1:-74936338 Msa0224890:CDS
CCAAGGGATGCAAGTCCTGC+AGG 0.423738 2_1:-74940954 Msa0224890:CDS
CTGCATGTAAAGCAGCTCTA+TGG 0.428426 2_1:+74940238 None:intergenic
CAAGGTTGCAAGCTGTGAAT+AGG 0.428938 2_1:-74941295 Msa0224890:CDS
TCAGCAAAGGATGCATCAAT+TGG 0.431477 2_1:+74936390 None:intergenic
TATGGTTCCACCATTGGCTG+TGG 0.433473 2_1:+74940256 None:intergenic
CCAGCAGCACTTCGAGCACT+TGG 0.434472 2_1:-74939350 Msa0224890:CDS
TCATCACCTGACAAATTAAT+GGG 0.434535 2_1:-74939139 Msa0224890:CDS
GCAGAAACAAGTATCTCATT+TGG 0.436202 2_1:-74941225 Msa0224890:CDS
TGATATGCACTTTGTAATCT+GGG 0.440689 2_1:-74933967 Msa0224890:three_prime_UTR
GTCAGACCACTGACCCTTGT+AGG 0.441681 2_1:+74940423 None:intergenic
TCGTCGTCAACAGCTTATTC+GGG 0.442226 2_1:-74941724 Msa0224890:CDS
CCAGGCAGGGCTTGACATGC+TGG 0.442745 2_1:-74935238 Msa0224890:CDS
CCAAGTGCTCGAAGTGCTGC+TGG 0.443748 2_1:+74939350 None:intergenic
CCAGCATGTCAAGCCCTGCC+TGG 0.449681 2_1:+74935238 None:intergenic
TAACAACGATCTGGTTCCTT+GGG 0.449969 2_1:+74942074 None:intergenic
ATGATTTGTGCAGCCTGGTC+CGG 0.450366 2_1:-74940523 Msa0224890:intron
CCATTCTACTAAGGTTTCTA+CGG 0.450972 2_1:-74938517 Msa0224890:CDS
CTCAGTCTAATGTCACTGGA+TGG 0.451187 2_1:-74939382 Msa0224890:CDS
TGCCTCCGGCCATTCTACTA+AGG 0.453131 2_1:-74938526 Msa0224890:CDS
GCAAGAGCATGTGGCCTAGT+GGG 0.454131 2_1:-74940453 Msa0224890:CDS
TATATCCTGCAGAGCAACTA+AGG 0.455566 2_1:+74935209 None:intergenic
TTGTAGTTTCTCTGGATCTC+GGG 0.456205 2_1:-74938426 Msa0224890:CDS
TGCCCAGTGGGTACCTGATA+AGG 0.456662 2_1:-74939794 Msa0224890:CDS
CATGCTCTTGCCGCCACACC+AGG 0.457174 2_1:+74940465 None:intergenic
CAAAGATGGTAAAGGTGTAA+TGG 0.457615 2_1:-74941832 Msa0224890:CDS
GGTTTCAATGAGGCACTCAA+TGG 0.458902 2_1:-74939229 Msa0224890:CDS
CTGAATCTTTCATTTGGCAA+TGG 0.460308 2_1:-74939115 Msa0224890:CDS
ATAACAACGATCTGGTTCCT+TGG 0.460402 2_1:+74942073 None:intergenic
CAGCTCTATGGTTCCACCAT+TGG 0.460705 2_1:+74940250 None:intergenic
GCAGGACTTGCATCCCTTGG+CGG 0.462034 2_1:+74940957 None:intergenic
ACCACGAGGGCCGATCTTTG+AGG 0.463233 2_1:+74940318 None:intergenic
CATGTCAAGCCCTGCCTGGT+TGG 0.463534 2_1:+74935242 None:intergenic
TGAATTCACAAGCTGGGCTC+AGG 0.465475 2_1:-74935941 Msa0224890:CDS
GGCAAGAGCATGTGGCCTAG+TGG 0.474488 2_1:-74940454 Msa0224890:CDS
TTATCGCGTCTTCGGGAGAA+TGG 0.474560 2_1:+74938228 None:intergenic
AGCTGGGCTCAGGACACCAC+TGG 0.476439 2_1:-74935931 Msa0224890:CDS
CTTCATGTGAAATCTGCCTT+AGG 0.477909 2_1:+74939408 None:intergenic
AGAGACAAAGACCGCCTTGA+AGG 0.478124 2_1:+74934290 None:intergenic
CAAAGATACAAGCTGTGATT+CGG 0.478150 2_1:-74941018 Msa0224890:CDS
TGTTGATCATATGGATTTGG+AGG 0.478929 2_1:-74939739 Msa0224890:intron
GTTGAGTGGGTCCAAATGCC+TGG 0.479281 2_1:-74940754 Msa0224890:CDS
TCTAATTTGAATTCACAAGC+TGG 0.482009 2_1:-74935948 Msa0224890:CDS
TTCCGGCGGGACCAATATCA+AGG 0.482193 2_1:+74936141 None:intergenic
TTTAGCAGAGTTTCTTTCAA+AGG 0.484145 2_1:-74940791 Msa0224890:CDS
CTGGAAGTCATTAAATTGGA+AGG 0.484276 2_1:-74938257 Msa0224890:CDS
AAACATGAAGATCGGTTAAA+CGG 0.484909 2_1:-74942136 Msa0224890:five_prime_UTR
AGCAGAGAAAAGAGGCTTCA+AGG 0.487168 2_1:-74941313 Msa0224890:CDS
ACTACAAGGACCAACTTTGA+TGG 0.487918 2_1:+74938442 None:intergenic
GGTTCAATATGAGAGAGAAT+AGG 0.490102 2_1:+74941696 None:intergenic
CGACGAATACTACTTGGCTT+AGG 0.490184 2_1:+74941741 None:intergenic
CCTGCAGGACTTGCATCCCT+TGG 0.490435 2_1:+74940954 None:intergenic
CTAATTTGAATTCACAAGCT+GGG 0.492834 2_1:-74935947 Msa0224890:CDS
GACTACCTTAGTTGCTCTGC+AGG 0.493839 2_1:-74935214 Msa0224890:CDS
TCATCTTGATAACAACGATC+TGG 0.494923 2_1:+74942065 None:intergenic
CAGTCTAATGTCACTGGATG+GGG 0.495074 2_1:-74939380 Msa0224890:CDS
AGAACGGCACAAAATTATAA+GGG 0.495448 2_1:+74934008 None:intergenic
CAATATCAAGGGCAGATGTC+AGG 0.496738 2_1:+74936153 None:intergenic
AGTGCTTCCTCTTTAACACT+TGG 0.497406 2_1:+74934131 None:intergenic
AAAGTGCCAATGCTACCCTT+TGG 0.497966 2_1:+74935976 None:intergenic
CGAAATCCAGAAGGCAGAAG+GGG 0.500490 2_1:+74936360 None:intergenic
GGTCTTTGTCTCTCAAGCAT+GGG 0.501753 2_1:-74934280 Msa0224890:CDS
ATTCCAATAGATTCCGGACC+AGG 0.502970 2_1:+74940510 None:intergenic
TGTTGACGACGAATACTACT+TGG 0.503246 2_1:+74941735 None:intergenic
GTTTCTCAGTCTAATGTCAC+TGG 0.504256 2_1:-74939386 Msa0224890:CDS
AATACTCTGCTGCACTCTAA+AGG 0.505703 2_1:-74935644 Msa0224890:intron
GTCTGTCCAAAGGGTAGCAT+TGG 0.507607 2_1:-74935982 Msa0224890:CDS
GGTCCAAATGCCTGGAATGA+AGG 0.509086 2_1:-74940746 Msa0224890:intron
GGAATCGTTGCGATTTCTCA+TGG 0.509332 2_1:-74940492 Msa0224890:CDS
GCAACGATTCCAATAGATTC+CGG 0.514017 2_1:+74940504 None:intergenic
TCAGTCTAATGTCACTGGAT+GGG 0.514519 2_1:-74939381 Msa0224890:CDS
GCTCTGACAAAATGCTGCAC+AGG 0.515515 2_1:+74939825 None:intergenic
TACTGGAACTGCTGTTGAGT+GGG 0.516900 2_1:-74940767 Msa0224890:CDS
TAGAGTGGACGCAGTACCTC+GGG 0.517204 2_1:+74939623 None:intergenic
TGGTCAATGATTGGCAATGA+TGG 0.517457 2_1:-74939190 Msa0224890:CDS
TATCGCGTCTTCGGGAGAAT+GGG 0.517540 2_1:+74938229 None:intergenic
CATTATATCGTCTGTCCAAA+GGG 0.517690 2_1:-74935991 Msa0224890:CDS
GTTTCAATGAGGCACTCAAT+GGG 0.519441 2_1:-74939228 Msa0224890:CDS
TCAGCTGCTGCCATCAAAGT+TGG 0.520575 2_1:-74938452 Msa0224890:CDS
CTATGAATCATCAACAATGC+TGG 0.521829 2_1:-74939603 Msa0224890:CDS
CGGTCTTTGTCTCTCAAGCA+TGG 0.523320 2_1:-74934281 Msa0224890:CDS
CCTCCTCGTGCTCAATAGTG+TGG 0.526283 2_1:+74938366 None:intergenic
AGTTTCTCTGGATCTCGGGT+TGG 0.526941 2_1:-74938422 Msa0224890:CDS
CATATGAAAGAGTAGTGGCT+TGG 0.526981 2_1:-74934246 Msa0224890:CDS
AACAAGTTGAAGCTCTTGAA+AGG 0.527652 2_1:-74941779 Msa0224890:CDS
CGAGCAGGAGCCAATGTAGT+TGG 0.527668 2_1:+74940119 None:intergenic
GCTATATGCGCCAACTACAT+TGG 0.528581 2_1:-74940129 Msa0224890:CDS
GCGATTTCTCATGGTTGCCC+TGG 0.528908 2_1:-74940483 Msa0224890:CDS
AGAAAATATTTGATGACCAT+GGG 0.531033 2_1:-74935179 Msa0224890:CDS
GCATTATATCGTCTGTCCAA+AGG 0.531571 2_1:-74935992 Msa0224890:CDS
TAGGACTCCAAGTGTTAAAG+AGG 0.533233 2_1:-74934138 Msa0224890:three_prime_UTR
ATGATCAACAATGTGGATGA+TGG 0.533950 2_1:+74939752 None:intergenic
GCCCTTGATATTGGTCCCGC+CGG 0.535455 2_1:-74936143 Msa0224890:CDS
CATAGAGCTGCTTTACATGC+AGG 0.535587 2_1:-74940237 Msa0224890:intron
TGCTAAAGTTTCCTCTGCAA+TGG 0.535889 2_1:+74940807 None:intergenic
CTCAATGGGTTTACTGATGA+GGG 0.537693 2_1:-74939214 Msa0224890:CDS
CCGTAGAAACCTTAGTAGAA+TGG 0.538900 2_1:+74938517 None:intergenic
TCCAGGCCCTACGTCACCTA+AGG 0.539524 2_1:-74939424 Msa0224890:intron
TGTTCGTTAATATAGATGTA+GGG 0.540034 2_1:-74941339 Msa0224890:intron
TGCTATGAATAAGCTGCTGA+TGG 0.540866 2_1:-74941264 Msa0224890:CDS
TGCTGATGGAAGAGAATGAT+AGG 0.540990 2_1:-74941250 Msa0224890:CDS
TGGGCGAAAGATTCTGTGCT+CGG 0.543187 2_1:-74935160 Msa0224890:CDS
AGGCCTTATCAGGTACCCAC+TGG 0.544746 2_1:+74939791 None:intergenic
TGCAAAAGAAACACTTCTCT+AGG 0.547856 2_1:+74938203 None:intergenic
GATGAGGGATGGTCAATGAT+TGG 0.547940 2_1:-74939199 Msa0224890:CDS
CATTCTACTAAGGTTTCTAC+GGG 0.549529 2_1:-74938516 Msa0224890:CDS
CTGATAAGGCCTTGTGAAGG+AGG 0.549792 2_1:-74939780 Msa0224890:CDS
GGGCTAGAGGAAGAATTACT+TGG 0.550060 2_1:+74938387 None:intergenic
TGAAAGAGTAGTGGCTTGGA+AGG 0.550985 2_1:-74934242 Msa0224890:CDS
CAAGAGCATGTGGCCTAGTG+GGG 0.553313 2_1:-74940452 Msa0224890:CDS
TGCTCTGCAGGATATAGCGT+TGG 0.554704 2_1:-74935202 Msa0224890:CDS
AACGTGCTTCCCACAGCCAA+TGG 0.555580 2_1:-74940266 Msa0224890:CDS
AGCAAATATAAGTTCAGCAC+AGG 0.556260 2_1:+74936413 None:intergenic
AACAACCATAAGTCTCGAGC+AGG 0.556394 2_1:+74940104 None:intergenic
TACGAAATCCAGAAGGCAGA+AGG 0.557452 2_1:+74936358 None:intergenic
AAGCTCAAACACTTGCTCGT+TGG 0.557927 2_1:-74935899 Msa0224890:CDS
ATGGTTCCACCATTGGCTGT+GGG 0.559192 2_1:+74940257 None:intergenic
CTTTGCCTAGAACGTGCCTC+CGG 0.560394 2_1:-74938540 Msa0224890:intron
ATGTCTTGCAAAGATGGTAA+AGG 0.562359 2_1:-74941840 Msa0224890:CDS
TGCTGGCAGGGGTTTCAATG+AGG 0.567674 2_1:-74939239 Msa0224890:intron
TTCTCATGGTTGCCCTGGTG+TGG 0.567875 2_1:-74940478 Msa0224890:CDS
CATTCCTCTTGATTCTGGGA+AGG 0.568169 2_1:-74936334 Msa0224890:intron
ATTGTTGATGATTCATAGAG+TGG 0.569522 2_1:+74939608 None:intergenic
ACGAAATCCAGAAGGCAGAA+GGG 0.570215 2_1:+74936359 None:intergenic
AGAAACCTTAGTAGAATGGC+CGG 0.570667 2_1:+74938521 None:intergenic
GAGCTGAGATGCTGCCCAGT+GGG 0.572763 2_1:-74939806 Msa0224890:CDS
GAGAAAATATTTGATGACCA+TGG 0.573520 2_1:-74935180 Msa0224890:CDS
TCATGGTTGCCCTGGTGTGG+CGG 0.573680 2_1:-74940475 Msa0224890:CDS
GAACAAGAAAGTTCTGTGGT+TGG 0.574935 2_1:-74941893 Msa0224890:five_prime_UTR
TTGATAGCTCTGCAGTGGAA+TGG 0.575064 2_1:-74936454 Msa0224890:intron
TTAGAAGCTTTGTTTCCGGC+GGG 0.576348 2_1:+74936128 None:intergenic
TTGCAGAAATCCTCAAAGAT+CGG 0.576829 2_1:-74940328 Msa0224890:CDS
CTGACAAAATGCTGCACAGG+AGG 0.577091 2_1:+74939828 None:intergenic
ACTCAATGGGTTTACTGATG+AGG 0.577528 2_1:-74939215 Msa0224890:CDS
TGCTCAATAGTGTGGGCTAG+AGG 0.577663 2_1:+74938374 None:intergenic
CAAGGGCAGATGTCAGGTCA+AGG 0.578879 2_1:+74936159 None:intergenic
TTATAAGGGAAATGTAACAT+AGG 0.579215 2_1:+74934022 None:intergenic
TAGGGAGAAGCAGAGAAAAG+AGG 0.579898 2_1:-74941321 Msa0224890:CDS
CATATTCCCACTAACCCTGC+AGG 0.581342 2_1:+74940939 None:intergenic
CTGGTTGGCAAAAGTGAACA+CGG 0.582446 2_1:+74935257 None:intergenic
CGAGATCCAGAGAAACTACA+AGG 0.585194 2_1:+74938428 None:intergenic
AGCACAGAATCTTTCGCCCA+TGG 0.587280 2_1:+74935163 None:intergenic
CTCCTCGTGCTCAATAGTGT+GGG 0.587564 2_1:+74938367 None:intergenic
ATAAGGCCTTGTGAAGGAGG+TGG 0.587584 2_1:-74939777 Msa0224890:CDS
AGTACCTCGGGAACACTCCA+TGG 0.589994 2_1:+74939635 None:intergenic
TGTGATTCGGCGGTGACTAG+TGG 0.591394 2_1:-74941005 Msa0224890:CDS
ATAGAGTGGACGCAGTACCT+CGG 0.591468 2_1:+74939622 None:intergenic
TAGTGGGGCTAGAACCTACA+AGG 0.592552 2_1:-74940437 Msa0224890:CDS
AAGACAGCATTACTGACAGA+TGG 0.593832 2_1:+74939088 None:intergenic
GACAGCCCAGCATCCGCCAA+GGG 0.598760 2_1:-74940970 Msa0224890:CDS
TTGTAGGTTCTAGCCCCACT+AGG 0.599076 2_1:+74940439 None:intergenic
TCCTCAAAGATCGGCCCTCG+TGG 0.600087 2_1:-74940319 Msa0224890:CDS
ATCTCGGGTTGGAAATTATG+GGG 0.600717 2_1:-74938411 Msa0224890:CDS
TTTAAGAAAATCAAAACCCA+AGG 0.600889 2_1:-74942090 Msa0224890:five_prime_UTR
AAGTTCAGAAACATGAAGAT+CGG 0.602513 2_1:-74942144 Msa0224890:five_prime_UTR
GTCTTTGTCTCTCAAGCATG+GGG 0.602518 2_1:-74934279 Msa0224890:CDS
GTATCGTGATTGCCGAGCTG+TGG 0.604463 2_1:-74940297 Msa0224890:CDS
AAATCTGCCTTAGGTGACGT+AGG 0.611020 2_1:+74939417 None:intergenic
TGCATCGGTGTGATGCCACA+AGG 0.613737 2_1:+74935666 None:intergenic
TGACAGCCCAGCATCCGCCA+AGG 0.614338 2_1:-74940971 Msa0224890:CDS
CAAGGGATGCAAGTCCTGCA+GGG 0.614855 2_1:-74940953 Msa0224890:intron
GCCGTGCCATAGATGCTACA+TGG 0.614931 2_1:+74936027 None:intergenic
ACGGGAGCATAGATCAGAGT+GGG 0.615662 2_1:-74938498 Msa0224890:CDS
GGCCTTATCAGGTACCCACT+GGG 0.617608 2_1:+74939792 None:intergenic
GTGCTTCCCACAGCCAATGG+TGG 0.620635 2_1:-74940263 Msa0224890:CDS
CTACTTAAATCTAACAACGA+GGG 0.623282 2_1:-74935709 Msa0224890:CDS
AGAATGACCAAATATAAGAA+CGG 0.623932 2_1:+74933992 None:intergenic
TCCTGTTTCAGATATGTGAG+AGG 0.625263 2_1:-74939884 Msa0224890:intron
ACCATGTAGCATCTATGGCA+CGG 0.626691 2_1:-74936028 Msa0224890:CDS
TACTTAAATCTAACAACGAG+GGG 0.627729 2_1:-74935708 Msa0224890:CDS
AATCTGCCTTAGGTGACGTA+GGG 0.627907 2_1:+74939418 None:intergenic
ATTAGAAGCTTTGTTTCCGG+CGG 0.628865 2_1:+74936127 None:intergenic
ATGCTCTTGCCGCCACACCA+GGG 0.629106 2_1:+74940466 None:intergenic
CGTTCAGAATATCCACAGCT+CGG 0.629690 2_1:+74940285 None:intergenic
AAGGGCAGATGTCAGGTCAA+GGG 0.631428 2_1:+74936160 None:intergenic
CTACTGGAACTGCTGTTGAG+TGG 0.637529 2_1:-74940768 Msa0224890:CDS
ATGGAGCCACCTCCTTCACA+AGG 0.638572 2_1:+74939771 None:intergenic
TATTTCATATGAAAGAGTAG+TGG 0.639118 2_1:-74934251 Msa0224890:CDS
AGATACAAGCTGTGATTCGG+CGG 0.639452 2_1:-74941015 Msa0224890:CDS
GCTGGGCTCAGGACACCACT+GGG 0.640667 2_1:-74935930 Msa0224890:CDS
GGTGTGGCGGCAAGAGCATG+TGG 0.641036 2_1:-74940462 Msa0224890:CDS
TCCGGCGGGACCAATATCAA+GGG 0.641420 2_1:+74936142 None:intergenic
ATGGGTTTACTGATGAGGGA+TGG 0.641840 2_1:-74939210 Msa0224890:CDS
GATAGAACAAGAAAGTTCTG+TGG 0.643642 2_1:-74941897 Msa0224890:five_prime_UTR
TACCTGATAAGGCCTTGTGA+AGG 0.644402 2_1:-74939783 Msa0224890:CDS
GAAATCCAGAAGGCAGAAGG+GGG 0.645694 2_1:+74936361 None:intergenic
TTAGCCATGGAGTGTTCCCG+AGG 0.654050 2_1:-74939639 Msa0224890:intron
AATCCATATGATCAACAATG+TGG 0.655570 2_1:+74939745 None:intergenic
AGTGCAGCAGAGTATTGCAT+CGG 0.658187 2_1:+74935651 None:intergenic
CACTTGGCCAAAGACTAAGC+CGG 0.659000 2_1:-74939334 Msa0224890:intron
TGGTTGGCAAAAGTGAACAC+GGG 0.662661 2_1:+74935258 None:intergenic
CTGACCTTCCCAGAATCAAG+AGG 0.668957 2_1:+74936330 None:intergenic
AATCATTACTCAAGTCCTTG+TGG 0.672589 2_1:-74935681 Msa0224890:CDS
GGAATGGATGAGAATGCTGT+TGG 0.673638 2_1:-74936438 Msa0224890:CDS
AGCCCACACTATTGAGCACG+AGG 0.673679 2_1:-74938369 Msa0224890:CDS
GGCTCAGAAGACAACAATGG+TGG 0.673814 2_1:-74939582 Msa0224890:intron
GGAATGATACGAAATCCAGA+AGG 0.683077 2_1:+74936351 None:intergenic
AGAGTGGGCAGACAACAACA+TGG 0.684198 2_1:-74938483 Msa0224890:CDS
TGAGCTTCAGGAGTACCCAG+TGG 0.684885 2_1:+74935915 None:intergenic
TTTAGAGGATGGAAGCCTAG+TGG 0.685470 2_1:-74940066 Msa0224890:intron
TCGGCAATCACGATACCACG+AGG 0.695617 2_1:+74940304 None:intergenic
AAATCCAGAAGGCAGAAGGG+GGG 0.697502 2_1:+74936362 None:intergenic
TACGGGAGCATAGATCAGAG+TGG 0.712778 2_1:-74938499 Msa0224890:CDS
TCTCGGGTTGGAAATTATGG+GGG 0.713766 2_1:-74938410 Msa0224890:CDS
GCTGGCTCAGAAGACAACAA+TGG 0.718261 2_1:-74939585 Msa0224890:CDS
CGGCAATCACGATACCACGA+GGG 0.718468 2_1:+74940305 None:intergenic
AACCTTAGTAGAATGGCCGG+AGG 0.718736 2_1:+74938524 None:intergenic
CCACACTATTGAGCACGAGG+AGG 0.733047 2_1:-74938366 Msa0224890:intron
AGAGCTGAGATGCTGCCCAG+TGG 0.741837 2_1:-74939807 Msa0224890:CDS
GCTACTTAAATCTAACAACG+AGG 0.746938 2_1:-74935710 Msa0224890:CDS
AGTGGGGCTAGAACCTACAA+GGG 0.773703 2_1:-74940436 Msa0224890:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATAAAAAAATGAATTTT+TGG - chr2_1:74934932-74934951 Msa0224890:intron 10.0%
!! AATTAAACAAAAAATATTAG+AGG + chr2_1:74935634-74935653 None:intergenic 10.0%
!! TATATATATATATGAATGAA+GGG + chr2_1:74939749-74939768 None:intergenic 10.0%
!! ATATATATATATATGAATGA+AGG + chr2_1:74939750-74939769 None:intergenic 10.0%
!!! AAAAAATATATTTTGCATTT+TGG + chr2_1:74941492-74941511 None:intergenic 10.0%
!!! GTGTTTTTTTTTTTTTAAGA+AGG + chr2_1:74934155-74934174 None:intergenic 15.0%
!!! CAAATAAGTTGTTTTTTTAA+TGG + chr2_1:74934791-74934810 None:intergenic 15.0%
!!! AAAATTTTGTGAGATTATTT+AGG - chr2_1:74934820-74934839 Msa0224890:intron 15.0%
!! TAGTAATAATACTCTAAATT+AGG + chr2_1:74935255-74935274 None:intergenic 15.0%
!!! TATTACTTCATTTTTTTCAT+CGG - chr2_1:74935653-74935672 Msa0224890:CDS 15.0%
!! ACAAATCATCAAAAATTAAT+GGG + chr2_1:74935810-74935829 None:intergenic 15.0%
!! TTCAAATTTAAATAACAGAA+AGG + chr2_1:74936797-74936816 None:intergenic 15.0%
!! AAATTTGAACTCTATATAAT+TGG - chr2_1:74936808-74936827 Msa0224890:intron 15.0%
!! AATTTGAACTCTATATAATT+GGG - chr2_1:74936809-74936828 Msa0224890:intron 15.0%
!! AAATTTATTGCATCTAAATT+TGG - chr2_1:74937067-74937086 Msa0224890:intron 15.0%
!! ACAATGTTAAAACTTAAAAT+TGG + chr2_1:74937758-74937777 None:intergenic 15.0%
!! TTCAATAAAAAAATTCAAGA+TGG + chr2_1:74938692-74938711 None:intergenic 15.0%
!! CTAATAATAAAATCACTTAT+GGG + chr2_1:74939112-74939131 None:intergenic 15.0%
!! AACATTTAATAAGTATACAA+TGG + chr2_1:74939465-74939484 None:intergenic 15.0%
!!! TTATTACTTTTGATATCAAA+AGG + chr2_1:74940811-74940830 None:intergenic 15.0%
!! TTTGATATCAAAAGTAATAA+TGG - chr2_1:74940811-74940830 Msa0224890:CDS 15.0%
!! ATATTAATATTACACAAACA+CGG - chr2_1:74941548-74941567 Msa0224890:intron 15.0%
!!! TTAATATTTTTTTTTCGGTT+CGG - chr2_1:74941758-74941777 Msa0224890:CDS 15.0%
!!! CTTTTGTTTTTGTTTTCTAT+GGG + chr2_1:74933976-74933995 None:intergenic 20.0%
!!! TCTTTTGTTTTTGTTTTCTA+TGG + chr2_1:74933977-74933996 None:intergenic 20.0%
!!! TTTTTTTTATGATGAGATTG+AGG + chr2_1:74934181-74934200 None:intergenic 20.0%
!! TATAAGATGAAAAAACTCAT+TGG + chr2_1:74934412-74934431 None:intergenic 20.0%
!!! GAGTTTTTTCATCTTATAAT+TGG - chr2_1:74934414-74934433 Msa0224890:intron 20.0%
!!! TCGAATAAAAGATGATTTTT+TGG - chr2_1:74934959-74934978 Msa0224890:intron 20.0%
!!! CGAATAAAAGATGATTTTTT+GGG - chr2_1:74934960-74934979 Msa0224890:intron 20.0%
!!! TTTTTGGGTAATGATATTAA+TGG - chr2_1:74934975-74934994 Msa0224890:intron 20.0%
!! ACTCTAAATTAGGAAAATAA+GGG + chr2_1:74935245-74935264 None:intergenic 20.0%
!! TACTCTAAATTAGGAAAATA+AGG + chr2_1:74935246-74935265 None:intergenic 20.0%
!! AGACAAGAAAAAAACAAAAA+GGG + chr2_1:74935447-74935466 None:intergenic 20.0%
!! TTAGTAACAAAGAAATTCAT+CGG + chr2_1:74935723-74935742 None:intergenic 20.0%
!! CAAATCATCAAAAATTAATG+GGG + chr2_1:74935809-74935828 None:intergenic 20.0%
!! CACAAATCATCAAAAATTAA+TGG + chr2_1:74935811-74935830 None:intergenic 20.0%
!! GAATCAAATAGAAATATTGA+AGG + chr2_1:74936321-74936340 None:intergenic 20.0%
!! GTAATAAAAAAAATAGAGCT+AGG + chr2_1:74936381-74936400 None:intergenic 20.0%
!! TTATGAATTTAAAGATGTGT+AGG - chr2_1:74938034-74938053 Msa0224890:intron 20.0%
!!! ATGAACAGAAGTTTTTAATT+CGG + chr2_1:74938361-74938380 None:intergenic 20.0%
!! ATTAAAAACTTCTGTTCATA+CGG - chr2_1:74938362-74938381 Msa0224890:intron 20.0%
!!! TTTTATTTGCTTTCTAATCT+AGG + chr2_1:74938607-74938626 None:intergenic 20.0%
!!! TTTTACTTTTCTAATAGACA+AGG - chr2_1:74939058-74939077 Msa0224890:intron 20.0%
!! CCTAATAATAAAATCACTTA+TGG + chr2_1:74939113-74939132 None:intergenic 20.0%
!!! CCATAAGTGATTTTATTATT+AGG - chr2_1:74939110-74939129 Msa0224890:CDS 20.0%
!!! AAAAACTTTGCTACTTTTTA+GGG + chr2_1:74939517-74939536 None:intergenic 20.0%
!! CCACATGTAATATAATAATT+GGG + chr2_1:74939808-74939827 None:intergenic 20.0%
!!! AATTTTGTATTGACCTTTTT+AGG - chr2_1:74940071-74940090 Msa0224890:CDS 20.0%
!! AACAAAATATACTCCTAAAA+AGG + chr2_1:74940087-74940106 None:intergenic 20.0%
!! ATTATTATGTAAAATTTCGC+AGG - chr2_1:74940137-74940156 Msa0224890:intron 20.0%
!! TAAACGGAAAGAAAAATAAA+AGG + chr2_1:74940499-74940518 None:intergenic 20.0%
!! AATCAAGACAAATATAACTA+CGG + chr2_1:74940981-74941000 None:intergenic 20.0%
!!! ATGTGATTTTTATTTTGGTT+CGG + chr2_1:74941376-74941395 None:intergenic 20.0%
!!! CAAATATATTTGGTTTTATG+CGG - chr2_1:74941864-74941883 Msa0224890:five_prime_UTR 20.0%
! TTTAAGAAAATCAAAACCCA+AGG - chr2_1:74934254-74934273 Msa0224890:CDS 25.0%
! TTCATCTTATAATTGGAATC+TGG - chr2_1:74934421-74934440 Msa0224890:intron 25.0%
!! TATACTAGTACCTTCTATTT+TGG + chr2_1:74934695-74934714 None:intergenic 25.0%
! TTGTTCGTTAATATAGATGT+AGG - chr2_1:74935004-74935023 Msa0224890:intron 25.0%
! TGTTCGTTAATATAGATGTA+GGG - chr2_1:74935005-74935024 Msa0224890:intron 25.0%
! CTCTAAATTAGGAAAATAAG+GGG + chr2_1:74935244-74935263 None:intergenic 25.0%
! GGAATATGATTATTGCAATT+GGG - chr2_1:74935420-74935439 Msa0224890:intron 25.0%
! CAGACAAGAAAAAAACAAAA+AGG + chr2_1:74935448-74935467 None:intergenic 25.0%
!! TTTTCTTGTCTGTGAAAATT+TGG - chr2_1:74935456-74935475 Msa0224890:intron 25.0%
!!! ATTTTTTTCATCGGTAGATA+TGG - chr2_1:74935662-74935681 Msa0224890:CDS 25.0%
! TCTCTTAAAAACACACAAAA+TGG - chr2_1:74936483-74936502 Msa0224890:intron 25.0%
! TAATGTATTATTGTTAGCCA+TGG - chr2_1:74936692-74936711 Msa0224890:intron 25.0%
! TACTTTATTCGCTAATTCTA+CGG + chr2_1:74937324-74937343 None:intergenic 25.0%
!! ATGATTTTAGACGAAGATAA+AGG - chr2_1:74937379-74937398 Msa0224890:intron 25.0%
! CATTAAATTTACAGTGTTCA+TGG - chr2_1:74937425-74937444 Msa0224890:intron 25.0%
!!! CATTTTCTTGTTTTGTTGTA+TGG - chr2_1:74937448-74937467 Msa0224890:intron 25.0%
!!! CATTTTCTTGTTTTGTTGTA+TGG - chr2_1:74937448-74937467 Msa0224890:intron 25.0%
!!! GATTTGCTAGTCATAAATAT+TGG + chr2_1:74937524-74937543 None:intergenic 25.0%
! TCAGTAATTGCATATAAGAA+AGG + chr2_1:74937624-74937643 None:intergenic 25.0%
!! TTTGTTTCCTTGAATTTTCT+AGG - chr2_1:74938436-74938455 Msa0224890:CDS 25.0%
!!! AATGTAAAACTTGATAGTGT+TGG - chr2_1:74938544-74938563 Msa0224890:intron 25.0%
!!! AAAAATTAACTTGCTCGTTT+AGG - chr2_1:74938710-74938729 Msa0224890:intron 25.0%
!! AATAAAAAGTTGCCTCATTT+TGG + chr2_1:74938767-74938786 None:intergenic 25.0%
!! TTAGTCCTTTTGTGAATAAT+CGG - chr2_1:74938883-74938902 Msa0224890:intron 25.0%
!! TGTGCAAGTTTTTATAATCA+GGG + chr2_1:74938931-74938950 None:intergenic 25.0%
!! TTGTGCAAGTTTTTATAATC+AGG + chr2_1:74938932-74938951 None:intergenic 25.0%
! ATAAAATCACTTATGGGTTT+GGG + chr2_1:74939106-74939125 None:intergenic 25.0%
! AATAAAATCACTTATGGGTT+TGG + chr2_1:74939107-74939126 None:intergenic 25.0%
!!! GTACTTTAAGATGTGAATTA+TGG - chr2_1:74939225-74939244 Msa0224890:CDS 25.0%
!!! GAAAAACTTTGCTACTTTTT+AGG + chr2_1:74939518-74939537 None:intergenic 25.0%
! CCCAATTATTATATTACATG+TGG - chr2_1:74939805-74939824 Msa0224890:CDS 25.0%
! GCCACATGTAATATAATAAT+TGG + chr2_1:74939809-74939828 None:intergenic 25.0%
! CTAAGTAAGATGAATGTAAA+CGG + chr2_1:74940515-74940534 None:intergenic 25.0%
!! GTTTTTACTGTCTATTTTGT+AGG - chr2_1:74940594-74940613 Msa0224890:intron 25.0%
! TCCTTTCATTAGTAATATCA+AGG + chr2_1:74940862-74940881 None:intergenic 25.0%
!! AGAAAATATTTGATGACCAT+GGG - chr2_1:74941165-74941184 Msa0224890:intron 25.0%
! ATTTCCTCTAATTATACAAC+AGG - chr2_1:74941208-74941227 Msa0224890:CDS 25.0%
! ACCAAAATAAAAATCACATG+CGG - chr2_1:74941377-74941396 Msa0224890:intron 25.0%
! CAAATTAAACCGCATATATT+TGG + chr2_1:74941452-74941471 None:intergenic 25.0%
! CAAATATATGCGGTTTAATT+TGG - chr2_1:74941450-74941469 Msa0224890:intron 25.0%
! CGCATAAAACCAAATATATT+TGG + chr2_1:74941866-74941885 None:intergenic 25.0%
! ACTACTCTTTCATATGAAAT+AGG + chr2_1:74942094-74942113 None:intergenic 25.0%
! TATTTCATATGAAAGAGTAG+TGG - chr2_1:74942093-74942112 Msa0224890:five_prime_UTR 25.0%
! TGACATTGTTAATAGACAAT+AGG - chr2_1:74942187-74942206 Msa0224890:five_prime_UTR 25.0%
! TTATAAGGGAAATGTAACAT+AGG + chr2_1:74942325-74942344 None:intergenic 25.0%
! AGAATGACCAAATATAAGAA+CGG + chr2_1:74942355-74942374 None:intergenic 25.0%
!! TGAAATTGAGCATGTTTTTG+AGG + chr2_1:74934049-74934068 None:intergenic 30.0%
AAGTTCAGAAACATGAAGAT+CGG - chr2_1:74934200-74934219 Msa0224890:CDS 30.0%
AAACATGAAGATCGGTTAAA+CGG - chr2_1:74934208-74934227 Msa0224890:CDS 30.0%
AACCTAAACAGATCAAAGTT+TGG - chr2_1:74934667-74934686 Msa0224890:intron 30.0%
AACCAAACTTTGATCTGTTT+AGG + chr2_1:74934672-74934691 None:intergenic 30.0%
! AAGTTTGGTTCCAAAATAGA+AGG - chr2_1:74934682-74934701 Msa0224890:intron 30.0%
! ATTATTTTCATACGTTCTCC+TGG - chr2_1:74934870-74934889 Msa0224890:intron 30.0%
TCATAATTGACAGTTTATCC+AGG + chr2_1:74934891-74934910 None:intergenic 30.0%
TTGGGTAATGATATTAATGG+TGG - chr2_1:74934978-74934997 Msa0224890:intron 30.0%
TGGGTAATGATATTAATGGT+GGG - chr2_1:74934979-74934998 Msa0224890:intron 30.0%
!! TCTCATTTGGTGTATGAAAA+TGG - chr2_1:74935132-74935151 Msa0224890:intron 30.0%
!! ACCATACATTTTGAGTATGT+TGG + chr2_1:74935167-74935186 None:intergenic 30.0%
AGGAAAATAAGGGGAAAATA+AGG + chr2_1:74935235-74935254 None:intergenic 30.0%
! GTATAGAATTTGAGTTAGAG+TGG - chr2_1:74935275-74935294 Msa0224890:intron 30.0%
GGGAATATGATTATTGCAAT+TGG - chr2_1:74935419-74935438 Msa0224890:intron 30.0%
AAAATTTGGATACGTCTGTT+TGG - chr2_1:74935470-74935489 Msa0224890:intron 30.0%
!!! GTTGCATTTTTTTCTTCTTC+AGG - chr2_1:74935507-74935526 Msa0224890:intron 30.0%
TTTAGCAGAGTTTCTTTCAA+AGG - chr2_1:74935553-74935572 Msa0224890:intron 30.0%
AATTAGATTACCTTCATTCC+AGG + chr2_1:74935611-74935630 None:intergenic 30.0%
GAAATTCATCGGAAATTAGA+GGG + chr2_1:74935712-74935731 None:intergenic 30.0%
AGAAATTCATCGGAAATTAG+AGG + chr2_1:74935713-74935732 None:intergenic 30.0%
!!! GATTTCTGTTTTTAACTACG+CGG + chr2_1:74936346-74936365 None:intergenic 30.0%
TCAACTACTTCTGAATTATG+AGG + chr2_1:74936412-74936431 None:intergenic 30.0%
AATCCATATGATCAACAATG+TGG + chr2_1:74936602-74936621 None:intergenic 30.0%
CATTGTTGATCATATGGATT+TGG - chr2_1:74936602-74936621 Msa0224890:intron 30.0%
!! ATTGTTGATGATTCATAGAG+TGG + chr2_1:74936739-74936758 None:intergenic 30.0%
ATGTTTACCATCTTAAAGAC+TGG - chr2_1:74936834-74936853 Msa0224890:intron 30.0%
TGTTTACCATCTTAAAGACT+GGG - chr2_1:74936835-74936854 Msa0224890:intron 30.0%
TATAAAGAAAACACAGCCTA+TGG + chr2_1:74936884-74936903 None:intergenic 30.0%
!!! ATTTTTTCTCCTTTTCATCC+AGG - chr2_1:74936903-74936922 Msa0224890:intron 30.0%
TTCATCACCTGACAAATTAA+TGG - chr2_1:74937204-74937223 Msa0224890:intron 30.0%
TCATCACCTGACAAATTAAT+GGG - chr2_1:74937205-74937224 Msa0224890:intron 30.0%
! CAAACAAGTTCTAATATCAC+CGG + chr2_1:74937589-74937608 None:intergenic 30.0%
! GTTTCTGGAAGTCATTAAAT+TGG - chr2_1:74938083-74938102 Msa0224890:intron 30.0%
TATGTTTCTCACTGTCAATA+AGG - chr2_1:74938194-74938213 Msa0224890:intron 30.0%
CATACGGTTTGAATTATTCA+AGG - chr2_1:74938378-74938397 Msa0224890:CDS 30.0%
TGACAAACCTAGAAAATTCA+AGG + chr2_1:74938446-74938465 None:intergenic 30.0%
! TTGAATTTTCTAGGTTTGTC+AGG - chr2_1:74938445-74938464 Msa0224890:CDS 30.0%
! GTTAGTGCAAACATTTTTGT+AGG - chr2_1:74938513-74938532 Msa0224890:CDS 30.0%
! GCAAACATTTTTGTAGGTTT+TGG - chr2_1:74938519-74938538 Msa0224890:CDS 30.0%
ATAGAAAGAAGTAAGCATAC+AGG + chr2_1:74938641-74938660 None:intergenic 30.0%
TTCTTTCTATGTCTATGATG+CGG - chr2_1:74938651-74938670 Msa0224890:intron 30.0%
TATGATAGAAACCAAAGTGA+AGG + chr2_1:74938801-74938820 None:intergenic 30.0%
CTCAATAAAGAGTAAAGCAA+TGG + chr2_1:74938824-74938843 None:intergenic 30.0%
AAAAACAGAATCATGTTGCA+AGG + chr2_1:74939042-74939061 None:intergenic 30.0%
TATACAGAAGCAAATTGGAT+AGG + chr2_1:74939140-74939159 None:intergenic 30.0%
ATTAAAGCGACTTCAAGAAA+AGG + chr2_1:74939205-74939224 None:intergenic 30.0%
CTAACAATAGAGGAGAAATT+CGG - chr2_1:74939295-74939314 Msa0224890:intron 30.0%
TAACAATAGAGGAGAAATTC+GGG - chr2_1:74939296-74939315 Msa0224890:intron 30.0%
TATCTCTCTAGATTTAAACG+TGG - chr2_1:74939350-74939369 Msa0224890:CDS 30.0%
GTATACAATGGACATTCTAA+AGG + chr2_1:74939453-74939472 None:intergenic 30.0%
ATAGAGATGGAAAAACTTGA+GGG + chr2_1:74939494-74939513 None:intergenic 30.0%
! TGCTACAATTTCTAGAAGAA+AGG + chr2_1:74939545-74939564 None:intergenic 30.0%
! TTCTTCTAGAAATTGTAGCA+AGG - chr2_1:74939545-74939564 Msa0224890:intron 30.0%
ATCCATACTGTTGTCATTAA+AGG + chr2_1:74939607-74939626 None:intergenic 30.0%
ATTAAATACCGAAGTTACTC+TGG - chr2_1:74939653-74939672 Msa0224890:intron 30.0%
TTAAATACCGAAGTTACTCT+GGG - chr2_1:74939654-74939673 Msa0224890:intron 30.0%
TATATATATGAATGAAGGGC+TGG + chr2_1:74939745-74939764 None:intergenic 30.0%
GTGTCGTAAATAATGTAACT+AGG + chr2_1:74939849-74939868 None:intergenic 30.0%
!! ATCATTAGAAGCTTTGTTTC+CGG + chr2_1:74940223-74940242 None:intergenic 30.0%
AACAAAGCTTCTAATGATTC+TGG - chr2_1:74940225-74940244 Msa0224890:intron 30.0%
GCTTGTGAATTCAAATTAGA+AGG + chr2_1:74940396-74940415 None:intergenic 30.0%
TCTAATTTGAATTCACAAGC+TGG - chr2_1:74940396-74940415 Msa0224890:intron 30.0%
CTAATTTGAATTCACAAGCT+GGG - chr2_1:74940397-74940416 Msa0224890:intron 30.0%
GGCTAAATTCATAATACTAG+CGG + chr2_1:74940542-74940561 None:intergenic 30.0%
GAATTTAGCCATGAATCTTA+TGG - chr2_1:74940552-74940571 Msa0224890:intron 30.0%
CTACTTAAATCTAACAACGA+GGG - chr2_1:74940635-74940654 Msa0224890:intron 30.0%
TACTTAAATCTAACAACGAG+GGG - chr2_1:74940636-74940655 Msa0224890:intron 30.0%
GCCTTGATATTACTAATGAA+AGG - chr2_1:74940858-74940877 Msa0224890:intron 30.0%
AGACAAATATAACTACGACA+CGG + chr2_1:74940907-74940926 None:intergenic 30.0%
!! TGTTTTGTTGCCTAGAATTT+CGG - chr2_1:74940938-74940957 Msa0224890:intron 30.0%
! GAGAAAATATTTGATGACCA+TGG - chr2_1:74941164-74941183 Msa0224890:intron 30.0%
CATACCTGTTGTATAATTAG+AGG + chr2_1:74941215-74941234 None:intergenic 30.0%
ATGCCATTCAATGACAAATA+TGG + chr2_1:74941284-74941303 None:intergenic 30.0%
!! ACCGCATGTGATTTTTATTT+TGG + chr2_1:74941381-74941400 None:intergenic 30.0%
AATAAAAATCACATGCGGTT+CGG - chr2_1:74941382-74941401 Msa0224890:intron 30.0%
TAAACCGCATATATTTGGAT+CGG + chr2_1:74941447-74941466 None:intergenic 30.0%
!! ATATGCGGTTTAATTTGGAT+CGG - chr2_1:74941455-74941474 Msa0224890:intron 30.0%
!!! GTTTAATTTGGATCGGTTTT+TGG - chr2_1:74941462-74941481 Msa0224890:intron 30.0%
CACAAACACGGTAAAATAAT+AGG - chr2_1:74941560-74941579 Msa0224890:intron 30.0%
!!! ATTTTTTTTTCGGTTCGGTT+CGG - chr2_1:74941763-74941782 Msa0224890:CDS 30.0%
TTTGTAAAAACCGCTAAGAT+CGG + chr2_1:74941826-74941845 None:intergenic 30.0%
CAAATATATTTGGATGCGTT+TGG + chr2_1:74941856-74941875 None:intergenic 30.0%
CAAACGCATCCAAATATATT+TGG - chr2_1:74941854-74941873 Msa0224890:exon 30.0%
!!! ATTTGGTTTTATGCGGTTTT+CGG - chr2_1:74941871-74941890 Msa0224890:five_prime_UTR 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - chr2_1:74941908-74941927 Msa0224890:five_prime_UTR 30.0%
! GACTTCTTTTCGTTCTTATT+TGG - chr2_1:74942017-74942036 Msa0224890:five_prime_UTR 30.0%
TTTGCTTTATGTTTGTGAAC+TGG - chr2_1:74942155-74942174 Msa0224890:five_prime_UTR 30.0%
AGAACGGCACAAAATTATAA+GGG + chr2_1:74942339-74942358 None:intergenic 30.0%
AAGAACGGCACAAAATTATA+AGG + chr2_1:74942340-74942359 None:intergenic 30.0%
!! TTTTGTGCCGTTCTTATATT+TGG - chr2_1:74942345-74942364 Msa0224890:five_prime_UTR 30.0%
ATGATATGCACTTTGTAATC+TGG - chr2_1:74942376-74942395 Msa0224890:five_prime_UTR 30.0%
!! GGTGTTGTTGTTAATGTTGT+TGG + chr2_1:74934022-74934041 None:intergenic 35.0%
! TCATCTTGATAACAACGATC+TGG + chr2_1:74934282-74934301 None:intergenic 35.0%
TTCTTCACTGTCTCTTCTTT+AGG - chr2_1:74934351-74934370 Msa0224890:intron 35.0%
GATAGAACAAGAAAGTTCTG+TGG - chr2_1:74934447-74934466 Msa0224890:intron 35.0%
GCTATTATGTCTTGCAAAGA+TGG - chr2_1:74934498-74934517 Msa0224890:intron 35.0%
ATGTCTTGCAAAGATGGTAA+AGG - chr2_1:74934504-74934523 Msa0224890:intron 35.0%
! CAAAGATGGTAAAGGTGTAA+TGG - chr2_1:74934512-74934531 Msa0224890:intron 35.0%
!! GGTAAAGGTGTAATGGATAA+TGG - chr2_1:74934519-74934538 Msa0224890:intron 35.0%
! AACAAGTTGAAGCTCTTGAA+AGG - chr2_1:74934565-74934584 Msa0224890:intron 35.0%
GGTTCAATATGAGAGAGAAT+AGG + chr2_1:74934651-74934670 None:intergenic 35.0%
GCAGAAACAAGTATCTCATT+TGG - chr2_1:74935119-74935138 Msa0224890:intron 35.0%
GCCAACATACTCAAAATGTA+TGG - chr2_1:74935163-74935182 Msa0224890:CDS 35.0%
! TAGAATTTGAGTTAGAGTGG+TGG - chr2_1:74935278-74935297 Msa0224890:intron 35.0%
CAAAGATACAAGCTGTGATT+CGG - chr2_1:74935326-74935345 Msa0224890:intron 35.0%
TCGACCTGTGTATTATTTAC+AGG - chr2_1:74935993-74936012 Msa0224890:CDS 35.0%
GCAACCTGTAAATAATACAC+AGG + chr2_1:74936000-74936019 None:intergenic 35.0%
TTGCAGAAATCCTCAAAGAT+CGG - chr2_1:74936016-74936035 Msa0224890:CDS 35.0%
!!! TACACATCTGTTTTAGAGGA+TGG - chr2_1:74936267-74936286 Msa0224890:intron 35.0%
CTTAACATTCACTTACCACT+AGG + chr2_1:74936296-74936315 None:intergenic 35.0%
ATGATCAACAATGTGGATGA+TGG + chr2_1:74936595-74936614 None:intergenic 35.0%
CATCCACATTGTTGATCATA+TGG - chr2_1:74936596-74936615 Msa0224890:intron 35.0%
TGTTGATCATATGGATTTGG+AGG - chr2_1:74936605-74936624 Msa0224890:intron 35.0%
CTATGAATCATCAACAATGC+TGG - chr2_1:74936741-74936760 Msa0224890:intron 35.0%
! ATTTGTCCCAGTCTTTAAGA+TGG + chr2_1:74936844-74936863 None:intergenic 35.0%
CCTCAGTTGAATATACTAAC+CGG + chr2_1:74937032-74937051 None:intergenic 35.0%
GGAATCTCACTTATATTTGC+TGG - chr2_1:74937088-74937107 Msa0224890:intron 35.0%
!! TTCAGACCCATTAATTTGTC+AGG + chr2_1:74937214-74937233 None:intergenic 35.0%
ATGGGTCTGAATCTTTCATT+TGG - chr2_1:74937223-74937242 Msa0224890:intron 35.0%
CTGAATCTTTCATTTGGCAA+TGG - chr2_1:74937229-74937248 Msa0224890:intron 35.0%
! TCAAGCAGTGTTTGTTAACT+AGG + chr2_1:74937548-74937567 None:intergenic 35.0%
TGTCCTCCTTAACAAAATCA+TGG - chr2_1:74937720-74937739 Msa0224890:intron 35.0%
CCATTCTACTAAGGTTTCTA+CGG - chr2_1:74937827-74937846 Msa0224890:intron 35.0%
CATTCTACTAAGGTTTCTAC+GGG - chr2_1:74937828-74937847 Msa0224890:intron 35.0%
!! TGCTTACCTATTCTAGTTTC+TGG - chr2_1:74938068-74938087 Msa0224890:intron 35.0%
TGACTTCCAGAAACTAGAAT+AGG + chr2_1:74938077-74938096 None:intergenic 35.0%
CTGGAAGTCATTAAATTGGA+AGG - chr2_1:74938087-74938106 Msa0224890:intron 35.0%
TGCAAAAGAAACACTTCTCT+AGG + chr2_1:74938144-74938163 None:intergenic 35.0%
ACATAAAGCGAGCAACATAA+GGG + chr2_1:74938179-74938198 None:intergenic 35.0%
AACATAAAGCGAGCAACATA+AGG + chr2_1:74938180-74938199 None:intergenic 35.0%
TCTTTCTATGTCTATGATGC+GGG - chr2_1:74938652-74938671 Msa0224890:intron 35.0%
GACTATAATATGAACTTCCG+TGG - chr2_1:74938738-74938757 Msa0224890:intron 35.0%
GAAACCAAAGTGAAGGTAAT+TGG + chr2_1:74938794-74938813 None:intergenic 35.0%
CAGATCCGATTATTCACAAA+AGG + chr2_1:74938891-74938910 None:intergenic 35.0%
TTTGTGAATAATCGGATCTG+TGG - chr2_1:74938891-74938910 Msa0224890:intron 35.0%
GCTAACAAGTTAATGATGCT+CGG - chr2_1:74938996-74939015 Msa0224890:intron 35.0%
TGGGACTGTATATTCATCAA+GGG + chr2_1:74939087-74939106 None:intergenic 35.0%
TTGGGACTGTATATTCATCA+AGG + chr2_1:74939088-74939107 None:intergenic 35.0%
GGACATATACAGAAGCAAAT+TGG + chr2_1:74939145-74939164 None:intergenic 35.0%
TTCAACTGGTGTAAGACATT+GGG + chr2_1:74939254-74939273 None:intergenic 35.0%
ATTCAACTGGTGTAAGACAT+TGG + chr2_1:74939255-74939274 None:intergenic 35.0%
CACCAGTTGAATTAAGAGTT+TGG - chr2_1:74939263-74939282 Msa0224890:intron 35.0%
AGCCAAACTCTTAATTCAAC+TGG + chr2_1:74939268-74939287 None:intergenic 35.0%
GCTTATCACACTAACAATAG+AGG - chr2_1:74939285-74939304 Msa0224890:intron 35.0%
AACAATAGAGGAGAAATTCG+GGG - chr2_1:74939297-74939316 Msa0224890:intron 35.0%
GATAGAGATGGAAAAACTTG+AGG + chr2_1:74939495-74939514 None:intergenic 35.0%
!!! CTACTTTTTAGGGATAGAGA+TGG + chr2_1:74939507-74939526 None:intergenic 35.0%
TGCCTTTAATGACAACAGTA+TGG - chr2_1:74939602-74939621 Msa0224890:CDS 35.0%
AATTACTCCCAGAGTAACTT+CGG + chr2_1:74939664-74939683 None:intergenic 35.0%
AGCAAATATAAGTTCAGCAC+AGG + chr2_1:74939934-74939953 None:intergenic 35.0%
GTATCATTCCTCTTGATTCT+GGG - chr2_1:74940006-74940025 Msa0224890:intron 35.0%
! TCTAATGATTCTGGAAGTTC+TGG - chr2_1:74940234-74940253 Msa0224890:intron 35.0%
CATTATATCGTCTGTCCAAA+GGG - chr2_1:74940353-74940372 Msa0224890:intron 35.0%
TTTAGCCATGAATCTTATGG+TGG - chr2_1:74940555-74940574 Msa0224890:intron 35.0%
ATCAACCACCATAAGATTCA+TGG + chr2_1:74940563-74940582 None:intergenic 35.0%
! TCTATTTTGTAGGTGCTTCT+TGG - chr2_1:74940604-74940623 Msa0224890:intron 35.0%
! CTATTTTGTAGGTGCTTCTT+GGG - chr2_1:74940605-74940624 Msa0224890:intron 35.0%
GCTACTTAAATCTAACAACG+AGG - chr2_1:74940634-74940653 Msa0224890:intron 35.0%
AATCATTACTCAAGTCCTTG+TGG - chr2_1:74940663-74940682 Msa0224890:intron 35.0%
! AATGACAAATATGGTGGAAG+TGG + chr2_1:74941275-74941294 None:intergenic 35.0%
CCATTCAATGACAAATATGG+TGG + chr2_1:74941281-74941300 None:intergenic 35.0%
CCACCATATTTGTCATTGAA+TGG - chr2_1:74941278-74941297 Msa0224890:CDS 35.0%
TTGTCATTGAATGGCATTTG+TGG - chr2_1:74941287-74941306 Msa0224890:CDS 35.0%
TGTCATTGAATGGCATTTGT+GGG - chr2_1:74941288-74941307 Msa0224890:CDS 35.0%
! TATGCGGTTTTCGGTTTTTT+TGG - chr2_1:74941880-74941899 Msa0224890:five_prime_UTR 35.0%
!!! GGTTTTCGGTTTTTTTGGAT+CGG - chr2_1:74941885-74941904 Msa0224890:five_prime_UTR 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG - chr2_1:74941903-74941922 Msa0224890:five_prime_UTR 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - chr2_1:74941913-74941932 Msa0224890:five_prime_UTR 35.0%
!! TCTTTTCGTTCTTATTTGGC+AGG - chr2_1:74942021-74942040 Msa0224890:five_prime_UTR 35.0%
!! CTTTTCGTTCTTATTTGGCA+GGG - chr2_1:74942022-74942041 Msa0224890:five_prime_UTR 35.0%
CTATATTCGCTGCAAAAACT+TGG - chr2_1:74942270-74942289 Msa0224890:five_prime_UTR 35.0%
!!! TGAGCATGTTTTTGAGGTTG+TGG + chr2_1:74934043-74934062 None:intergenic 40.0%
! TAACAACGATCTGGTTCCTT+GGG + chr2_1:74934273-74934292 None:intergenic 40.0%
! ATAACAACGATCTGGTTCCT+TGG + chr2_1:74934274-74934293 None:intergenic 40.0%
GAACAAGAAAGTTCTGTGGT+TGG - chr2_1:74934451-74934470 Msa0224890:intron 40.0%
! TCAAGAGCTTCAACTTGTTC+AGG + chr2_1:74934564-74934583 None:intergenic 40.0%
TGTTGACGACGAATACTACT+TGG + chr2_1:74934612-74934631 None:intergenic 40.0%
TTCGTCGTCAACAGCTTATT+CGG - chr2_1:74934619-74934638 Msa0224890:intron 40.0%
TGCTATGAATAAGCTGCTGA+TGG - chr2_1:74935080-74935099 Msa0224890:intron 40.0%
TGCTGATGGAAGAGAATGAT+AGG - chr2_1:74935094-74935113 Msa0224890:intron 40.0%
CGAATCACAGCTTGTATCTT+TGG + chr2_1:74935328-74935347 None:intergenic 40.0%
TGCTAAAGTTTCCTCTGCAA+TGG + chr2_1:74935540-74935559 None:intergenic 40.0%
GAGTTTCTTTCAAAGGCTAC+TGG - chr2_1:74935560-74935579 Msa0224890:intron 40.0%
TTACCTTCATTCCAGGCATT+TGG + chr2_1:74935604-74935623 None:intergenic 40.0%
!! TTTTGATGATTTGTGCAGCC+TGG - chr2_1:74935816-74935835 Msa0224890:intron 40.0%
GCAACGATTCCAATAGATTC+CGG + chr2_1:74935843-74935862 None:intergenic 40.0%
AGCATGTCATCGATGAACAT+CGG + chr2_1:74935974-74935993 None:intergenic 40.0%
CTGAAACAGGAATGCATTCA+AGG + chr2_1:74936451-74936470 None:intergenic 40.0%
TCCTGTTTCAGATATGTGAG+AGG - chr2_1:74936460-74936479 Msa0224890:intron 40.0%
! ACCTCTCACATATCTGAAAC+AGG + chr2_1:74936464-74936483 None:intergenic 40.0%
AAAGAAAACACAGCCTATGG+TGG + chr2_1:74936881-74936900 None:intergenic 40.0%
CTTCATGTGAAATCTGCCTT+AGG + chr2_1:74936939-74936958 None:intergenic 40.0%
GTTTCTCAGTCTAATGTCAC+TGG - chr2_1:74936958-74936977 Msa0224890:intron 40.0%
TCAGTCTAATGTCACTGGAT+GGG - chr2_1:74936963-74936982 Msa0224890:intron 40.0%
! ATACTAACCGGCTTAGTCTT+TGG + chr2_1:74937020-74937039 None:intergenic 40.0%
CCGGTTAGTATATTCAACTG+AGG - chr2_1:74937029-74937048 Msa0224890:intron 40.0%
! TCTCACTTATATTTGCTGGC+AGG - chr2_1:74937092-74937111 Msa0224890:intron 40.0%
! CTCACTTATATTTGCTGGCA+GGG - chr2_1:74937093-74937112 Msa0224890:intron 40.0%
! TCACTTATATTTGCTGGCAG+GGG - chr2_1:74937094-74937113 Msa0224890:intron 40.0%
! GTTTCAATGAGGCACTCAAT+GGG - chr2_1:74937116-74937135 Msa0224890:intron 40.0%
! ACTCAATGGGTTTACTGATG+AGG - chr2_1:74937129-74937148 Msa0224890:intron 40.0%
! CTCAATGGGTTTACTGATGA+GGG - chr2_1:74937130-74937149 Msa0224890:intron 40.0%
TGGTCAATGATTGGCAATGA+TGG - chr2_1:74937154-74937173 Msa0224890:intron 40.0%
AAGACAGCATTACTGACAGA+TGG + chr2_1:74937259-74937278 None:intergenic 40.0%
AAACACTGCTTGAATCCAGT+GGG - chr2_1:74937555-74937574 Msa0224890:intron 40.0%
! TGGCCATGATTTTGTTAAGG+AGG + chr2_1:74937726-74937745 None:intergenic 40.0%
! CTCTGGCCATGATTTTGTTA+AGG + chr2_1:74937729-74937748 None:intergenic 40.0%
AACAAAATCATGGCCAGAGA+CGG - chr2_1:74937730-74937749 Msa0224890:intron 40.0%
CTTAAAATTGGTACCGTCTC+TGG + chr2_1:74937746-74937765 None:intergenic 40.0%
AGAAACCTTAGTAGAATGGC+CGG + chr2_1:74937826-74937845 None:intergenic 40.0%
CCGTAGAAACCTTAGTAGAA+TGG + chr2_1:74937830-74937849 None:intergenic 40.0%
ACTACAAGGACCAACTTTGA+TGG + chr2_1:74937905-74937924 None:intergenic 40.0%
CTTGTAGTTTCTCTGGATCT+CGG - chr2_1:74937917-74937936 Msa0224890:intron 40.0%
TTGTAGTTTCTCTGGATCTC+GGG - chr2_1:74937918-74937937 Msa0224890:intron 40.0%
!! GATCTCGGGTTGGAAATTAT+GGG - chr2_1:74937932-74937951 Msa0224890:intron 40.0%
!! ATCTCGGGTTGGAAATTATG+GGG - chr2_1:74937933-74937952 Msa0224890:intron 40.0%
ATAAAGCGAGCAACATAAGG+GGG + chr2_1:74938177-74938196 None:intergenic 40.0%
CATAAAGCGAGCAACATAAG+GGG + chr2_1:74938178-74938197 None:intergenic 40.0%
!! TTAACTTGCTCGTTTAGGTC+AGG - chr2_1:74938715-74938734 Msa0224890:intron 40.0%
!! TAACTTGCTCGTTTAGGTCA+GGG - chr2_1:74938716-74938735 Msa0224890:intron 40.0%
CTTGCCAATTACCTTCACTT+TGG - chr2_1:74938787-74938806 Msa0224890:intron 40.0%
TCACAAAAGGACTAAGCACA+TGG + chr2_1:74938878-74938897 None:intergenic 40.0%
AAACTTGCACAACTTCCCAA+AGG - chr2_1:74938940-74938959 Msa0224890:intron 40.0%
GACTGTATATTCATCAAGGG+AGG + chr2_1:74939084-74939103 None:intergenic 40.0%
AGGTACTACCTATGAAGCAA+GGG + chr2_1:74939185-74939204 None:intergenic 40.0%
! AAGGTACTACCTATGAAGCA+AGG + chr2_1:74939186-74939205 None:intergenic 40.0%
AAACGTGGCTTCTCCTAATT+TGG - chr2_1:74939365-74939384 Msa0224890:CDS 40.0%
CTCCTAATTTGGTAGAAGCT+TGG - chr2_1:74939376-74939395 Msa0224890:CDS 40.0%
TGCCAAGCTTCTACCAAATT+AGG + chr2_1:74939381-74939400 None:intergenic 40.0%
TTTGGTAGAAGCTTGGCATT+AGG - chr2_1:74939383-74939402 Msa0224890:CDS 40.0%
! GAAGTTACTCTGGGAGTAAT+TGG - chr2_1:74939663-74939682 Msa0224890:intron 40.0%
AATGTGTGTGTGTGTGTGAA+GGG + chr2_1:74939696-74939715 None:intergenic 40.0%
TAATGTGTGTGTGTGTGTGA+AGG + chr2_1:74939697-74939716 None:intergenic 40.0%
ACACACATTAACGTTACGCT+GGG - chr2_1:74939707-74939726 Msa0224890:intron 40.0%
!!! TTGTTTTGATAGCTCTGCAG+TGG - chr2_1:74939885-74939904 Msa0224890:intron 40.0%
TCAGCAAAGGATGCATCAAT+TGG + chr2_1:74939957-74939976 None:intergenic 40.0%
GGAATGATACGAAATCCAGA+AGG + chr2_1:74939996-74940015 None:intergenic 40.0%
CGTATCATTCCTCTTGATTC+TGG - chr2_1:74940005-74940024 Msa0224890:intron 40.0%
TACTGCTTCAACAATGACCA+AGG + chr2_1:74940040-74940059 None:intergenic 40.0%
!! ATTAGAAGCTTTGTTTCCGG+CGG + chr2_1:74940220-74940239 None:intergenic 40.0%
GCATTATATCGTCTGTCCAA+AGG - chr2_1:74940352-74940371 Msa0224890:intron 40.0%
GTTGGATCAGCAACAGTTAT+AGG - chr2_1:74940463-74940482 Msa0224890:CDS 40.0%
AATACTCTGCTGCACTCTAA+AGG - chr2_1:74940700-74940719 Msa0224890:intron 40.0%
TAGAGATGCACCGAAATTCT+AGG + chr2_1:74940951-74940970 None:intergenic 40.0%
! AATTTCGGTGCATCTCTACT+TGG - chr2_1:74940953-74940972 Msa0224890:intron 40.0%
TATATCCTGCAGAGCAACTA+AGG + chr2_1:74941138-74941157 None:intergenic 40.0%
GTGGAAGTGGAATAAATGAC+GGG + chr2_1:74941262-74941281 None:intergenic 40.0%
GGTGGAAGTGGAATAAATGA+CGG + chr2_1:74941263-74941282 None:intergenic 40.0%
TGTGGGCATACATTCTTCTT+AGG - chr2_1:74941305-74941324 Msa0224890:CDS 40.0%
GTGGGCATACATTCTTCTTA+GGG - chr2_1:74941306-74941325 Msa0224890:CDS 40.0%
TGGGCATACATTCTTCTTAG+GGG - chr2_1:74941307-74941326 Msa0224890:CDS 40.0%
!! ATATTTGGATCGGTTCGGTT+TGG + chr2_1:74941437-74941456 None:intergenic 40.0%
CGCATATATTTGGATCGGTT+CGG + chr2_1:74941442-74941461 None:intergenic 40.0%
CGAACCGATCCAAATATATG+CGG - chr2_1:74941440-74941459 Msa0224890:intron 40.0%
AAAAACCGCTAAGATCGGAT+CGG + chr2_1:74941821-74941840 None:intergenic 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG - chr2_1:74941892-74941911 Msa0224890:five_prime_UTR 40.0%
ACACCCCTAATTCTTCTCAT+TGG - chr2_1:74941942-74941961 Msa0224890:five_prime_UTR 40.0%
GCTCCAATGAGAAGAATTAG+GGG + chr2_1:74941948-74941967 None:intergenic 40.0%
CGCTCCAATGAGAAGAATTA+GGG + chr2_1:74941949-74941968 None:intergenic 40.0%
CATATGAAAGAGTAGTGGCT+TGG - chr2_1:74942098-74942117 Msa0224890:five_prime_UTR 40.0%
TAGGACTCCAAGTGTTAAAG+AGG - chr2_1:74942206-74942225 Msa0224890:five_prime_UTR 40.0%
AGTGCTTCCTCTTTAACACT+TGG + chr2_1:74942216-74942235 None:intergenic 40.0%
CGACGAATACTACTTGGCTT+AGG + chr2_1:74934606-74934625 None:intergenic 45.0%
TCGTCGTCAACAGCTTATTC+GGG - chr2_1:74934620-74934639 Msa0224890:intron 45.0%
TAGGGAGAAGCAGAGAAAAG+AGG - chr2_1:74935023-74935042 Msa0224890:intron 45.0%
AGCAGAGAAAAGAGGCTTCA+AGG - chr2_1:74935031-74935050 Msa0224890:intron 45.0%
CAAGGTTGCAAGCTGTGAAT+AGG - chr2_1:74935049-74935068 Msa0224890:intron 45.0%
! AGATACAAGCTGTGATTCGG+CGG - chr2_1:74935329-74935348 Msa0224890:intron 45.0%
TACTGGAACTGCTGTTGAGT+GGG - chr2_1:74935577-74935596 Msa0224890:intron 45.0%
TCATCGGAAATTAGAGGGTG+AGG + chr2_1:74935707-74935726 None:intergenic 45.0%
ATTCCAATAGATTCCGGACC+AGG + chr2_1:74935837-74935856 None:intergenic 45.0%
GGAATCGTTGCGATTTCTCA+TGG - chr2_1:74935852-74935871 Msa0224890:intron 45.0%
CGTTCAGAATATCCACAGCT+CGG + chr2_1:74936062-74936081 None:intergenic 45.0%
CTGCATGTAAAGCAGCTCTA+TGG + chr2_1:74936109-74936128 None:intergenic 45.0%
! CATAGAGCTGCTTTACATGC+AGG - chr2_1:74936107-74936126 Msa0224890:CDS 45.0%
GCTATATGCGCCAACTACAT+TGG - chr2_1:74936215-74936234 Msa0224890:intron 45.0%
AACAACCATAAGTCTCGAGC+AGG + chr2_1:74936243-74936262 None:intergenic 45.0%
!! GCGCTACACATCTGTTTTAG+AGG - chr2_1:74936263-74936282 Msa0224890:intron 45.0%
TTTAGAGGATGGAAGCCTAG+TGG - chr2_1:74936278-74936297 Msa0224890:intron 45.0%
! TACCTGATAAGGCCTTGTGA+AGG - chr2_1:74936561-74936580 Msa0224890:intron 45.0%
TAGAACATGAGCTCCACCAT+AGG - chr2_1:74936865-74936884 Msa0224890:intron 45.0%
AATCTGCCTTAGGTGACGTA+GGG + chr2_1:74936929-74936948 None:intergenic 45.0%
AAATCTGCCTTAGGTGACGT+AGG + chr2_1:74936930-74936949 None:intergenic 45.0%
CTCAGTCTAATGTCACTGGA+TGG - chr2_1:74936962-74936981 Msa0224890:intron 45.0%
CAGTCTAATGTCACTGGATG+GGG - chr2_1:74936964-74936983 Msa0224890:intron 45.0%
! GGTTTCAATGAGGCACTCAA+TGG - chr2_1:74937115-74937134 Msa0224890:intron 45.0%
ATGGGTTTACTGATGAGGGA+TGG - chr2_1:74937134-74937153 Msa0224890:intron 45.0%
GATGAGGGATGGTCAATGAT+TGG - chr2_1:74937145-74937164 Msa0224890:intron 45.0%
CAAACACTGCTTGAATCCAG+TGG - chr2_1:74937554-74937573 Msa0224890:intron 45.0%
GCTTGAATCCAGTGGGATTA+TGG - chr2_1:74937562-74937581 Msa0224890:intron 45.0%
AATCCAGTGGGATTATGGTC+CGG - chr2_1:74937567-74937586 Msa0224890:intron 45.0%
ACAGCAAGACTGGAACTAGA+CGG + chr2_1:74937703-74937722 None:intergenic 45.0%
GTTGGTCCTTGTAGTTTCTC+TGG - chr2_1:74937910-74937929 Msa0224890:intron 45.0%
CGAGATCCAGAGAAACTACA+AGG + chr2_1:74937919-74937938 None:intergenic 45.0%
!! GGATCTCGGGTTGGAAATTA+TGG - chr2_1:74937931-74937950 Msa0224890:intron 45.0%
!! TCTCGGGTTGGAAATTATGG+GGG - chr2_1:74937934-74937953 Msa0224890:intron 45.0%
GGGCTAGAGGAAGAATTACT+TGG + chr2_1:74937960-74937979 None:intergenic 45.0%
TCTAGGCATTATCGCGTCTT+CGG + chr2_1:74938127-74938146 None:intergenic 45.0%
TAAAGCGAGCAACATAAGGG+GGG + chr2_1:74938176-74938195 None:intergenic 45.0%
! CTGTTTTGCCTCATGTGATG+CGG - chr2_1:74938233-74938252 Msa0224890:CDS 45.0%
CTACATATCCGCATCACATG+AGG + chr2_1:74938244-74938263 None:intergenic 45.0%
!! CTTGATAGTGTTGGCACACT+TGG - chr2_1:74938553-74938572 Msa0224890:intron 45.0%
TCTGTATATGTCCCACAACC+AGG - chr2_1:74939152-74939171 Msa0224890:CDS 45.0%
CTGTATATGTCCCACAACCA+GGG - chr2_1:74939153-74939172 Msa0224890:CDS 45.0%
GGTACTACCTATGAAGCAAG+GGG + chr2_1:74939184-74939203 None:intergenic 45.0%
AGCTTGGCATTAGGATCTGT+AGG - chr2_1:74939392-74939411 Msa0224890:CDS 45.0%
CACACACATTAACGTTACGC+TGG - chr2_1:74939706-74939725 Msa0224890:intron 45.0%
! TTGATAGCTCTGCAGTGGAA+TGG - chr2_1:74939890-74939909 Msa0224890:intron 45.0%
GGAATGGATGAGAATGCTGT+TGG - chr2_1:74939906-74939925 Msa0224890:intron 45.0%
ACGAAATCCAGAAGGCAGAA+GGG + chr2_1:74939988-74940007 None:intergenic 45.0%
TACGAAATCCAGAAGGCAGA+AGG + chr2_1:74939989-74940008 None:intergenic 45.0%
! CATTCCTCTTGATTCTGGGA+AGG - chr2_1:74940010-74940029 Msa0224890:intron 45.0%
CAATATCAAGGGCAGATGTC+AGG + chr2_1:74940194-74940213 None:intergenic 45.0%
CTGACATCTGCCCTTGATAT+TGG - chr2_1:74940192-74940211 Msa0224890:intron 45.0%
!! TTAGAAGCTTTGTTTCCGGC+GGG + chr2_1:74940219-74940238 None:intergenic 45.0%
GCAAGACCATGTAGCATCTA+TGG - chr2_1:74940311-74940330 Msa0224890:CDS 45.0%
ACCATGTAGCATCTATGGCA+CGG - chr2_1:74940316-74940335 Msa0224890:CDS 45.0%
! AAAGTGCCAATGCTACCCTT+TGG + chr2_1:74940371-74940390 None:intergenic 45.0%
AAGCTCAAACACTTGCTCGT+TGG - chr2_1:74940445-74940464 Msa0224890:CDS 45.0%
!! AGTGCAGCAGAGTATTGCAT+CGG + chr2_1:74940696-74940715 None:intergenic 45.0%
TCAAAAGGCTGAGTTGCACT+AGG + chr2_1:74940796-74940815 None:intergenic 45.0%
!! CTTGTTTGAAAGCACCTTCG+TGG - chr2_1:74941041-74941060 Msa0224890:intron 45.0%
TGGTTGGCAAAAGTGAACAC+GGG + chr2_1:74941089-74941108 None:intergenic 45.0%
CTGGTTGGCAAAAGTGAACA+CGG + chr2_1:74941090-74941109 None:intergenic 45.0%
!! ATTCTTCTTAGGGGTGTTCG+CGG - chr2_1:74941316-74941335 Msa0224890:CDS 45.0%
!! AAATCACATGCGGTTCGGTT+CGG - chr2_1:74941387-74941406 Msa0224890:intron 45.0%
!!! TTTTTCGGTTCGGTTCGGTT+TGG - chr2_1:74941768-74941787 Msa0224890:CDS 45.0%
GCTAAGATCGGATCGGATTT+CGG + chr2_1:74941814-74941833 None:intergenic 45.0%
GAAATCCGATCCGATCTTAG+CGG - chr2_1:74941813-74941832 Msa0224890:CDS 45.0%
GCGCTCCAATGAGAAGAATT+AGG + chr2_1:74941950-74941969 None:intergenic 45.0%
GGTCTTTGTCTCTCAAGCAT+GGG - chr2_1:74942064-74942083 Msa0224890:five_prime_UTR 45.0%
GTCTTTGTCTCTCAAGCATG+GGG - chr2_1:74942065-74942084 Msa0224890:five_prime_UTR 45.0%
! TGAAAGAGTAGTGGCTTGGA+AGG - chr2_1:74942102-74942121 Msa0224890:five_prime_UTR 45.0%
!!! ATTATGATTTTTTTTTTTTT+TGG - chr2_1:74934904-74934923 Msa0224890:intron 5.0%
!!! AAGTATTAATATTTTTTTTT+CGG - chr2_1:74941753-74941772 Msa0224890:CDS 5.0%
CATATTCCCACTAACCCTGC+AGG + chr2_1:74935408-74935427 None:intergenic 50.0%
! CAGGCTTTTGTCCATTGCAG+AGG - chr2_1:74935526-74935545 Msa0224890:intron 50.0%
CTACTGGAACTGCTGTTGAG+TGG - chr2_1:74935576-74935595 Msa0224890:intron 50.0%
GGTCCAAATGCCTGGAATGA+AGG - chr2_1:74935598-74935617 Msa0224890:intron 50.0%
! ATGATTTGTGCAGCCTGGTC+CGG - chr2_1:74935821-74935840 Msa0224890:intron 50.0%
! TTGTAGGTTCTAGCCCCACT+AGG + chr2_1:74935908-74935927 None:intergenic 50.0%
TAGTGGGGCTAGAACCTACA+AGG - chr2_1:74935907-74935926 Msa0224890:CDS 50.0%
AGTGGGGCTAGAACCTACAA+GGG - chr2_1:74935908-74935927 Msa0224890:CDS 50.0%
CTAGAACCTACAAGGGTCAG+TGG - chr2_1:74935915-74935934 Msa0224890:CDS 50.0%
! ATGGTTCCACCATTGGCTGT+GGG + chr2_1:74936090-74936109 None:intergenic 50.0%
! TATGGTTCCACCATTGGCTG+TGG + chr2_1:74936091-74936110 None:intergenic 50.0%
CAGCTCTATGGTTCCACCAT+TGG + chr2_1:74936097-74936116 None:intergenic 50.0%
CTGACAAAATGCTGCACAGG+AGG + chr2_1:74936519-74936538 None:intergenic 50.0%
GCTCTGACAAAATGCTGCAC+AGG + chr2_1:74936522-74936541 None:intergenic 50.0%
! CTCCTTCACAAGGCCTTATC+AGG + chr2_1:74936566-74936585 None:intergenic 50.0%
! CTGATAAGGCCTTGTGAAGG+AGG - chr2_1:74936564-74936583 Msa0224890:intron 50.0%
! ATAAGGCCTTGTGAAGGAGG+TGG - chr2_1:74936567-74936586 Msa0224890:intron 50.0%
ATAGAGTGGACGCAGTACCT+CGG + chr2_1:74936725-74936744 None:intergenic 50.0%
! GCTGGCTCAGAAGACAACAA+TGG - chr2_1:74936759-74936778 Msa0224890:intron 50.0%
GGCTCAGAAGACAACAATGG+TGG - chr2_1:74936762-74936781 Msa0224890:intron 50.0%
CACTTGGCCAAAGACTAAGC+CGG - chr2_1:74937010-74937029 Msa0224890:intron 50.0%
GTTAAGGAGGACAGCAAGAC+TGG + chr2_1:74937713-74937732 None:intergenic 50.0%
AACCTTAGTAGAATGGCCGG+AGG + chr2_1:74937823-74937842 None:intergenic 50.0%
! TACGGGAGCATAGATCAGAG+TGG - chr2_1:74937845-74937864 Msa0224890:intron 50.0%
! ACGGGAGCATAGATCAGAGT+GGG - chr2_1:74937846-74937865 Msa0224890:intron 50.0%
AGAGTGGGCAGACAACAACA+TGG - chr2_1:74937861-74937880 Msa0224890:intron 50.0%
TCAGCTGCTGCCATCAAAGT+TGG - chr2_1:74937892-74937911 Msa0224890:intron 50.0%
AGTTTCTCTGGATCTCGGGT+TGG - chr2_1:74937922-74937941 Msa0224890:intron 50.0%
!! TGCTCAATAGTGTGGGCTAG+AGG + chr2_1:74937973-74937992 None:intergenic 50.0%
CTCCTCGTGCTCAATAGTGT+GGG + chr2_1:74937980-74937999 None:intergenic 50.0%
TATCGCGTCTTCGGGAGAAT+GGG + chr2_1:74938118-74938137 None:intergenic 50.0%
TTATCGCGTCTTCGGGAGAA+TGG + chr2_1:74938119-74938138 None:intergenic 50.0%
CTAGGCATTATCGCGTCTTC+GGG + chr2_1:74938126-74938145 None:intergenic 50.0%
CGCATCACATGAGGCAAAAC+AGG + chr2_1:74938235-74938254 None:intergenic 50.0%
! GTGAATGACACTGCATCGAC+AGG + chr2_1:74938580-74938599 None:intergenic 50.0%
!! TTGCCTCATTTTGGCAGCCA+CGG + chr2_1:74938758-74938777 None:intergenic 50.0%
TGTGTGTGTGTGTGAAGGGT+GGG + chr2_1:74939692-74939711 None:intergenic 50.0%
AACGTTACGCTGGGAGTAAG+CGG - chr2_1:74939716-74939735 Msa0224890:intron 50.0%
AAATCCAGAAGGCAGAAGGG+GGG + chr2_1:74939985-74940004 None:intergenic 50.0%
GAAATCCAGAAGGCAGAAGG+GGG + chr2_1:74939986-74940005 None:intergenic 50.0%
CGAAATCCAGAAGGCAGAAG+GGG + chr2_1:74939987-74940006 None:intergenic 50.0%
CTGACCTTCCCAGAATCAAG+AGG + chr2_1:74940017-74940036 None:intergenic 50.0%
!! AAGGGTGCGATTTGGGTTGT+TGG + chr2_1:74940169-74940188 None:intergenic 50.0%
! TCAGGTCAAGGGTGCGATTT+GGG + chr2_1:74940176-74940195 None:intergenic 50.0%
AAGGGCAGATGTCAGGTCAA+GGG + chr2_1:74940187-74940206 None:intergenic 50.0%
GTCTGTCCAAAGGGTAGCAT+TGG - chr2_1:74940362-74940381 Msa0224890:intron 50.0%
TGAATTCACAAGCTGGGCTC+AGG - chr2_1:74940403-74940422 Msa0224890:intron 50.0%
CGAGCAAGTGTTTGAGCTTC+AGG + chr2_1:74940444-74940463 None:intergenic 50.0%
CTGAGTTGCACTAGGTACAG+AGG + chr2_1:74940788-74940807 None:intergenic 50.0%
GCAAAAACCAAGTGCCACGA+AGG + chr2_1:74941058-74941077 None:intergenic 50.0%
!! TCGTGGCACTTGGTTTTTGC+AGG - chr2_1:74941058-74941077 Msa0224890:intron 50.0%
!! CGTGTTCACTTTTGCCAACC+AGG - chr2_1:74941088-74941107 Msa0224890:intron 50.0%
!! TTCACTTTTGCCAACCAGGC+AGG - chr2_1:74941092-74941111 Msa0224890:intron 50.0%
!! TCACTTTTGCCAACCAGGCA+GGG - chr2_1:74941093-74941112 Msa0224890:intron 50.0%
GACTACCTTAGTTGCTCTGC+AGG - chr2_1:74941130-74941149 Msa0224890:intron 50.0%
TGCTCTGCAGGATATAGCGT+TGG - chr2_1:74941142-74941161 Msa0224890:intron 50.0%
AGCACAGAATCTTTCGCCCA+TGG + chr2_1:74941184-74941203 None:intergenic 50.0%
TGGGCGAAAGATTCTGTGCT+CGG - chr2_1:74941184-74941203 Msa0224890:intron 50.0%
!! TGCGGTTTGGATCGGTTTTG+AGG - chr2_1:74941339-74941358 Msa0224890:intron 50.0%
AGAGACAAAGACCGCCTTGA+AGG + chr2_1:74942057-74942076 None:intergenic 50.0%
CGGTCTTTGTCTCTCAAGCA+TGG - chr2_1:74942063-74942082 Msa0224890:five_prime_UTR 50.0%
! TGTGATTCGGCGGTGACTAG+TGG - chr2_1:74935339-74935358 Msa0224890:intron 55.0%
CAAGGGATGCAAGTCCTGCA+GGG - chr2_1:74935391-74935410 Msa0224890:intron 55.0%
TGCAAGTCCTGCAGGGTTAG+TGG - chr2_1:74935398-74935417 Msa0224890:intron 55.0%
! GCAAGTCCTGCAGGGTTAGT+GGG - chr2_1:74935399-74935418 Msa0224890:intron 55.0%
GTTGAGTGGGTCCAAATGCC+TGG - chr2_1:74935590-74935609 Msa0224890:intron 55.0%
CAGCCTGGTCCGGAATCTAT+TGG - chr2_1:74935831-74935850 Msa0224890:intron 55.0%
GCGATTTCTCATGGTTGCCC+TGG - chr2_1:74935861-74935880 Msa0224890:intron 55.0%
TTCTCATGGTTGCCCTGGTG+TGG - chr2_1:74935866-74935885 Msa0224890:intron 55.0%
! GCAAGAGCATGTGGCCTAGT+GGG - chr2_1:74935891-74935910 Msa0224890:CDS 55.0%
! CAAGAGCATGTGGCCTAGTG+GGG - chr2_1:74935892-74935911 Msa0224890:CDS 55.0%
GTCAGACCACTGACCCTTGT+AGG + chr2_1:74935924-74935943 None:intergenic 55.0%
CGGCAATCACGATACCACGA+GGG + chr2_1:74936042-74936061 None:intergenic 55.0%
TCGGCAATCACGATACCACG+AGG + chr2_1:74936043-74936062 None:intergenic 55.0%
GTATCGTGATTGCCGAGCTG+TGG - chr2_1:74936047-74936066 Msa0224890:intron 55.0%
AACGTGCTTCCCACAGCCAA+TGG - chr2_1:74936078-74936097 Msa0224890:CDS 55.0%
CGAGCAGGAGCCAATGTAGT+TGG + chr2_1:74936228-74936247 None:intergenic 55.0%
TGGCTCCTGCTCGAGACTTA+TGG - chr2_1:74936235-74936254 Msa0224890:intron 55.0%
TGCCCAGTGGGTACCTGATA+AGG - chr2_1:74936550-74936569 Msa0224890:intron 55.0%
! GGCCTTATCAGGTACCCACT+GGG + chr2_1:74936555-74936574 None:intergenic 55.0%
! AGGCCTTATCAGGTACCCAC+TGG + chr2_1:74936556-74936575 None:intergenic 55.0%
ATGGAGCCACCTCCTTCACA+AGG + chr2_1:74936576-74936595 None:intergenic 55.0%
! TTAGCCATGGAGTGTTCCCG+AGG - chr2_1:74936705-74936724 Msa0224890:intron 55.0%
AGTACCTCGGGAACACTCCA+TGG + chr2_1:74936712-74936731 None:intergenic 55.0%
TAGAGTGGACGCAGTACCTC+GGG + chr2_1:74936724-74936743 None:intergenic 55.0%
GACGTAGGGCCTGGATGAAA+AGG + chr2_1:74936915-74936934 None:intergenic 55.0%
TGCTGGCAGGGGTTTCAATG+AGG - chr2_1:74937105-74937124 Msa0224890:intron 55.0%
TCACCGGACCATAATCCCAC+TGG + chr2_1:74937573-74937592 None:intergenic 55.0%
CTTTGCCTAGAACGTGCCTC+CGG - chr2_1:74937804-74937823 Msa0224890:intron 55.0%
TGCCTCCGGCCATTCTACTA+AGG - chr2_1:74937818-74937837 Msa0224890:intron 55.0%
AGCCCACACTATTGAGCACG+AGG - chr2_1:74937975-74937994 Msa0224890:intron 55.0%
CCTCCTCGTGCTCAATAGTG+TGG + chr2_1:74937981-74938000 None:intergenic 55.0%
CCACACTATTGAGCACGAGG+AGG - chr2_1:74937978-74937997 Msa0224890:intron 55.0%
CTTCCGTGGCTGCCAAAATG+AGG - chr2_1:74938752-74938771 Msa0224890:intron 55.0%
GGCATGACCCCTTGCTTCAT+AGG - chr2_1:74939174-74939193 Msa0224890:CDS 55.0%
GTGTGTGTGTGTGTGAAGGG+TGG + chr2_1:74939693-74939712 None:intergenic 55.0%
!! AAGGGGGGCATCATCAGCAA+AGG + chr2_1:74939970-74939989 None:intergenic 55.0%
! GATTCTGGGAAGGTCAGCCT+TGG - chr2_1:74940020-74940039 Msa0224890:intron 55.0%
! GTCAGGTCAAGGGTGCGATT+TGG + chr2_1:74940177-74940196 None:intergenic 55.0%
CAAGGGCAGATGTCAGGTCA+AGG + chr2_1:74940188-74940207 None:intergenic 55.0%
TCCGGCGGGACCAATATCAA+GGG + chr2_1:74940205-74940224 None:intergenic 55.0%
TTCCGGCGGGACCAATATCA+AGG + chr2_1:74940206-74940225 None:intergenic 55.0%
GCCGTGCCATAGATGCTACA+TGG + chr2_1:74940320-74940339 None:intergenic 55.0%
!! TGAGCTTCAGGAGTACCCAG+TGG + chr2_1:74940432-74940451 None:intergenic 55.0%
! TGCATCGGTGTGATGCCACA+AGG + chr2_1:74940681-74940700 None:intergenic 55.0%
!! GAAAGCACCTTCGTGGCACT+TGG - chr2_1:74941048-74941067 Msa0224890:intron 55.0%
!! ACATGCGGTTCGGTTCGGTT+TGG - chr2_1:74941392-74941411 Msa0224890:intron 55.0%
!! CGGTTCGGTTCGGTTTGGTT+CGG - chr2_1:74941773-74941792 Msa0224890:CDS 55.0%
! CAGGGTTTTGCGTGCCTTCA+AGG - chr2_1:74942040-74942059 Msa0224890:five_prime_UTR 55.0%
! GGTTTTGCGTGCCTTCAAGG+CGG - chr2_1:74942043-74942062 Msa0224890:five_prime_UTR 55.0%
! TGCATCCCTTGGCGGATGCT+GGG + chr2_1:74935382-74935401 None:intergenic 60.0%
! TTGCATCCCTTGGCGGATGC+TGG + chr2_1:74935383-74935402 None:intergenic 60.0%
GCAGGACTTGCATCCCTTGG+CGG + chr2_1:74935390-74935409 None:intergenic 60.0%
CCTGCAGGACTTGCATCCCT+TGG + chr2_1:74935393-74935412 None:intergenic 60.0%
CCAAGGGATGCAAGTCCTGC+AGG - chr2_1:74935390-74935409 Msa0224890:intron 60.0%
TCATGGTTGCCCTGGTGTGG+CGG - chr2_1:74935869-74935888 Msa0224890:intron 60.0%
ATGCTCTTGCCGCCACACCA+GGG + chr2_1:74935881-74935900 None:intergenic 60.0%
! GGCAAGAGCATGTGGCCTAG+TGG - chr2_1:74935890-74935909 Msa0224890:CDS 60.0%
TCCTCAAAGATCGGCCCTCG+TGG - chr2_1:74936025-74936044 Msa0224890:CDS 60.0%
ACCACGAGGGCCGATCTTTG+AGG + chr2_1:74936029-74936048 None:intergenic 60.0%
GTGCTTCCCACAGCCAATGG+TGG - chr2_1:74936081-74936100 Msa0224890:CDS 60.0%
! TGCTGCACAGGAGGCATGCT+TGG + chr2_1:74936510-74936529 None:intergenic 60.0%
AGAGCTGAGATGCTGCCCAG+TGG - chr2_1:74936537-74936556 Msa0224890:intron 60.0%
GAGCTGAGATGCTGCCCAGT+GGG - chr2_1:74936538-74936557 Msa0224890:intron 60.0%
TCCAGGCCCTACGTCACCTA+AGG - chr2_1:74936920-74936939 Msa0224890:intron 60.0%
!! CCAAGTGCTCGAAGTGCTGC+TGG + chr2_1:74936997-74937016 None:intergenic 60.0%
CCAGCAGCACTTCGAGCACT+TGG - chr2_1:74936994-74937013 Msa0224890:intron 60.0%
! AATGGCCGGAGGCACGTTCT+AGG + chr2_1:74937812-74937831 None:intergenic 60.0%
AGGGGTCATGCCCTGGTTGT+GGG + chr2_1:74939166-74939185 None:intergenic 60.0%
AAGGGGTCATGCCCTGGTTG+TGG + chr2_1:74939167-74939186 None:intergenic 60.0%
TGAAGCAAGGGGTCATGCCC+TGG + chr2_1:74939173-74939192 None:intergenic 60.0%
GCCCTTGATATTGGTCCCGC+CGG - chr2_1:74940201-74940220 Msa0224890:intron 60.0%
CATGTCAAGCCCTGCCTGGT+TGG + chr2_1:74941105-74941124 None:intergenic 60.0%
!! TCTTAGGGGTGTTCGCGGTG+CGG - chr2_1:74941321-74941340 Msa0224890:CDS 60.0%
! GTTCGCGGTGCGGTTTGGAT+CGG - chr2_1:74941331-74941350 Msa0224890:intron 60.0%
TGACAGCCCAGCATCCGCCA+AGG - chr2_1:74935373-74935392 Msa0224890:intron 65.0%
GACAGCCCAGCATCCGCCAA+GGG - chr2_1:74935374-74935393 Msa0224890:intron 65.0%
CATGCTCTTGCCGCCACACC+AGG + chr2_1:74935882-74935901 None:intergenic 65.0%
! GGTGTGGCGGCAAGAGCATG+TGG - chr2_1:74935882-74935901 Msa0224890:CDS 65.0%
GCCTTAGGTGACGTAGGGCC+TGG + chr2_1:74936924-74936943 None:intergenic 65.0%
GATGCCCCCCTTCTGCCTTC+TGG - chr2_1:74939978-74939997 Msa0224890:intron 65.0%
AGCTGGGCTCAGGACACCAC+TGG - chr2_1:74940413-74940432 Msa0224890:intron 65.0%
GCTGGGCTCAGGACACCACT+GGG - chr2_1:74940414-74940433 Msa0224890:intron 65.0%
CCAGCATGTCAAGCCCTGCC+TGG + chr2_1:74941109-74941128 None:intergenic 65.0%
CCAGGCAGGGCTTGACATGC+TGG - chr2_1:74941106-74941125 Msa0224890:intron 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr2_1:74941326-74941345 Msa0224890:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 74933967 74942399 74933967 ID=Msa0224890;Name=Msa0224890
chr2_1 mRNA 74933967 74942399 74933967 ID=Msa0224890-mRNA-1;Parent=Msa0224890;Name=Msa0224890-mRNA-1;_AED=0.12;_eAED=0.12;_QI=537|0.94|0.89|1|0.88|0.89|19|210|831
chr2_1 exon 74933967 74934323 74933967 ID=Msa0224890-mRNA-1:exon:22333;Parent=Msa0224890-mRNA-1
chr2_1 exon 74935137 74935286 74935137 ID=Msa0224890-mRNA-1:exon:22332;Parent=Msa0224890-mRNA-1
chr2_1 exon 74935645 74935750 74935645 ID=Msa0224890-mRNA-1:exon:22331;Parent=Msa0224890-mRNA-1
chr2_1 exon 74935882 74936050 74935882 ID=Msa0224890-mRNA-1:exon:22330;Parent=Msa0224890-mRNA-1
chr2_1 exon 74936063 74936207 74936063 ID=Msa0224890-mRNA-1:exon:22329;Parent=Msa0224890-mRNA-1
chr2_1 exon 74936335 74936469 74936335 ID=Msa0224890-mRNA-1:exon:22328;Parent=Msa0224890-mRNA-1
chr2_1 exon 74938202 74938282 74938202 ID=Msa0224890-mRNA-1:exon:22327;Parent=Msa0224890-mRNA-1
chr2_1 exon 74938367 74938552 74938367 ID=Msa0224890-mRNA-1:exon:22326;Parent=Msa0224890-mRNA-1
chr2_1 exon 74939060 74939252 74939060 ID=Msa0224890-mRNA-1:exon:22325;Parent=Msa0224890-mRNA-1
chr2_1 exon 74939335 74939441 74939335 ID=Msa0224890-mRNA-1:exon:22324;Parent=Msa0224890-mRNA-1
chr2_1 exon 74939583 74939657 74939583 ID=Msa0224890-mRNA-1:exon:22323;Parent=Msa0224890-mRNA-1
chr2_1 exon 74939740 74939895 74939740 ID=Msa0224890-mRNA-1:exon:22322;Parent=Msa0224890-mRNA-1
chr2_1 exon 74940067 74940150 74940067 ID=Msa0224890-mRNA-1:exon:22321;Parent=Msa0224890-mRNA-1
chr2_1 exon 74940238 74940351 74940238 ID=Msa0224890-mRNA-1:exon:22320;Parent=Msa0224890-mRNA-1
chr2_1 exon 74940437 74940532 74940437 ID=Msa0224890-mRNA-1:exon:22319;Parent=Msa0224890-mRNA-1
chr2_1 exon 74940747 74940837 74940747 ID=Msa0224890-mRNA-1:exon:22318;Parent=Msa0224890-mRNA-1
chr2_1 exon 74940954 74941054 74940954 ID=Msa0224890-mRNA-1:exon:22317;Parent=Msa0224890-mRNA-1
chr2_1 exon 74941187 74941346 74941187 ID=Msa0224890-mRNA-1:exon:22316;Parent=Msa0224890-mRNA-1
chr2_1 exon 74941663 74942399 74941663 ID=Msa0224890-mRNA-1:exon:22315;Parent=Msa0224890-mRNA-1
chr2_1 five_prime_UTR 74941863 74942399 74941863 ID=Msa0224890-mRNA-1:five_prime_utr;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74941663 74941862 74941663 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74941187 74941346 74941187 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74940954 74941054 74940954 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74940747 74940837 74940747 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74940437 74940532 74940437 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74940238 74940351 74940238 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74940067 74940150 74940067 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74939740 74939895 74939740 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74939583 74939657 74939583 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74939335 74939441 74939335 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74939060 74939252 74939060 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74938367 74938552 74938367 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74938202 74938282 74938202 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74936335 74936469 74936335 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74936063 74936207 74936063 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74935882 74936050 74935882 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74935645 74935750 74935645 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74935137 74935286 74935137 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 CDS 74934177 74934323 74934177 ID=Msa0224890-mRNA-1:cds;Parent=Msa0224890-mRNA-1
chr2_1 three_prime_UTR 74933967 74934176 74933967 ID=Msa0224890-mRNA-1:three_prime_utr;Parent=Msa0224890-mRNA-1
Gene Sequence

>Msa0224890

ATGTCTTGCAAAGATGGTAAAGGTGTAATGGATAATGGAAAATACGTTCGTTATACACCTGAACAAGTTGAAGCTCTTGAAAGGCTTTATCATGATTGTCCTAAGCCAAGTAGTATTCGTCGTCAACAGCTTATTCGGGAGTGTCCTATTCTCTCTCATATTGAACCTAAACAGATCAAAGTTTGGTTCCAAAATAGAAGATGTAGGGAGAAGCAGAGAAAAGAGGCTTCAAGGTTGCAAGCTGTGAATAGGAAGTTGAGTGCTATGAATAAGCTGCTGATGGAAGAGAATGATAGGTTGCAGAAACAAGTATCTCATTTGGTGTATGAAAATGGCTACTTTCGCCAACATACTCAAAATACTAATCTTGCAACCAAAGATACAAGCTGTGATTCGGCGGTGACTAGTGGTCAACGCAGTTTGACAGCCCAGCATCCGCCAAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAGGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGAATCTATTGGAATCGTTGCGATTTCTCATGGTTGCCCTGGTGTGGCGGCAAGAGCATGTGGCCTAGTGGGGCTAGAACCTACAAGGGTTGCAGAAATCCTCAAAGATCGGCCCTCGTGGTATCGTGATTGCCGAGCTGTGGATATTCTGAACGTGCTTCCCACAGCCAATGGTGGAACCATAGAGCTGCTTTACATGCAGCTATATGCGCCAACTACATTGGCTCCTGCTCGAGACTTATGGTTGTTGCGCTACACATCTGTTTTAGAGGATGGAAGCCTAGTGATATGTGAGAGGTCTCTTAAAAACACACAAAATGGTCCAAGCATGCCTCCTGTGCAGCATTTTGTCAGAGCTGAGATGCTGCCCAGTGGGTACCTGATAAGGCCTTGTGAAGGAGGTGGCTCCATCATCCACATTGTTGATCATATGGATTTGGAGCCATGGAGTGTTCCCGAGGTACTGCGTCCACTCTATGAATCATCAACAATGCTGGCTCAGAAGACAACAATGGTGGCCCTACGTCACCTAAGGCAGATTTCACATGAAGTTTCTCAGTCTAATGTCACTGGATGGGGTAGACGACCAGCAGCACTTCGAGCACTTGGCCAAAGACTAAGCCGGGGTTTCAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGTCAATGATTGGCAATGATGGTGTTGACGATGTTACTATTCTAGTGAATTCATCACCTGACAAATTAATGGGTCTGAATCTTTCATTTGGCAATGGATTTCCATCTGTCAGTAATGCTGTCTTATGTGCTAAAGCTTCAATGCTGTTACAAAACGTGCCTCCGGCCATTCTACTAAGGTTTCTACGGGAGCATAGATCAGAGTGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCATCAAAGTTGGTCCTTGTAGTTTCTCTGGATCTCGGGTTGGAAATTATGGGGGCCAAGTAATTCTTCCTCTAGCCCACACTATTGAGCACGAGGAGTTTCTGGAAGTCATTAAATTGGAAGGAATCGCCCATTCTCCCGAAGACGCGATAATGCCTAGAGAAGTGTTTCTTTTGCAACTCTGCAGTGGAATGGATGAGAATGCTGTTGGTACCTGTGCTGAACTTATATTTGCTCCAATTGATGCATCCTTTGCTGATGATGCCCCCCTTCTGCCTTCTGGATTTCGTATCATTCCTCTTGATTCTGGGAAGGAAGTGTCCAACAACCCAAATCGCACCCTTGACCTGACATCTGCCCTTGATATTGGTCCCGCCGGAAACAAAGCTTCTAATGATTCTGGAAGTTCTGGCTGTATGAGATCAGTGATGACAATAGCATTTGAATTTGCTTTTGAAAACCATGTAGCATCTATGGCACGGCAATATGTTCGCAGCATTATATCGTCTGTCCAAAGGGTAGCATTGGCACTTTCACCTTCTAATTTGAATTCACAAGCTGGGCTCAGGACACCACTGGGTACTCCTGAAGCTCAAACACTTGCTCGTTGGATCAGCAACAGTTATAGGTGCTTCTTGGGTGCTGAGCTACTTAAATCTAACAACGAGGGGAGCGAATCATTACTCAAGTCCTTGTGGCATCACACCGATGCAATACTCTGCTGCACTCTAAAGGCGTTGCCCGTGTTCACTTTTGCCAACCAGGCAGGGCTTGACATGCTGGAGACTACCTTAGTTGCTCTGCAGGATATAGCGTTGGAGAAAATATTTGATGACCATGGGCGAAAGATTCTGTGCTCGGAATTTCCTCTAATTATACAACAGGGTTTTGCGTGCCTTCAAGGCGGTCTTTGTCTCTCAAGCATGGGGAGACCTATTTCATATGAAAGAGTAGTGGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTTGTGAACTGGTCTTTTGTTTGA
Protein sequence

>Msa0224890

MSCKDGKGVMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQNTNLATKDTSCDSAVTSGQRSLTAQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPESIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDILNVLPTANGGTIELLYMQLYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTMLAQKTTMVALRHLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDDVTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDAIMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEVSNNPNRTLDLTSALDIGPAGNKASNDSGSSGCMRSVMTIAFEFAFENHVASMARQYVRSIISSVQRVALALSPSNLNSQAGLRTPLGTPEAQTLARWISNSYRCFLGAELLKSNNEGSESLLKSLWHHTDAILCCTLKALPVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKILCSEFPLIIQQGFACLQGGLCLSSMGRPISYERVVAWKVLNEEENAHCICFMFVNWSFV*