AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0227200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227200 MtrunA17_Chr3g0125241 98.780 164 2 0 1 164 26 189 1.87e-116 333
Msa0227200 MtrunA17_Chr1g0159661 77.439 164 37 0 1 164 1 164 1.42e-90 267
Msa0227200 MtrunA17_Chr3g0142191 46.479 142 76 0 1 142 1 142 3.28e-43 147
Msa0227200 MtrunA17_Chr5g0404951 47.945 146 72 2 1 142 1 146 1.17e-40 141
Msa0227200 MtrunA17_Chr8g0351051 35.385 260 141 8 1 246 1 247 5.91e-37 132
Msa0227200 MtrunA17_Chr1g0164791 37.572 173 94 3 1 160 1 172 6.43e-34 124
Msa0227200 MtrunA17_Chr2g0284911 44.898 147 74 3 1 142 16 160 7.46e-34 124
Msa0227200 MtrunA17_Chr7g0220121 40.719 167 91 3 1 160 1 166 7.86e-34 124
Msa0227200 MtrunA17_Chr4g0061691 45.578 147 74 2 1 142 1 146 8.03e-34 123
Msa0227200 MtrunA17_Chr3g0077501 44.218 147 75 2 1 142 1 145 9.85e-34 123
Msa0227200 MtrunA17_Chr3g0097101 44.218 147 75 2 1 142 16 160 1.15e-33 123
Msa0227200 MtrunA17_Chr8g0366231 46.939 147 72 3 1 142 1 146 1.75e-33 122
Msa0227200 MtrunA17_Chr5g0420081 45.578 147 74 3 1 142 1 146 2.68e-33 122
Msa0227200 MtrunA17_Chr6g0455511 45.205 146 75 2 1 142 1 145 2.02e-32 120
Msa0227200 MtrunA17_Chr7g0220111 44.521 146 76 2 1 142 1 145 2.26e-32 120
Msa0227200 MtrunA17_Chr2g0279821 41.420 169 89 4 1 161 1 167 3.52e-32 119
Msa0227200 MtrunA17_Chr5g0411691 35.616 219 115 7 1 205 1 207 3.87e-32 119
Msa0227200 MtrunA17_Chr6g0474371 41.497 147 79 2 1 141 1 146 6.28e-32 117
Msa0227200 MtrunA17_Chr8g0380021 41.497 147 79 2 1 142 17 161 1.24e-31 118
Msa0227200 MtrunA17_Chr4g0061671 43.056 144 78 2 1 141 1 143 2.06e-31 115
Msa0227200 MtrunA17_Chr3g0122251 41.333 150 79 3 1 142 1 149 4.99e-30 114
Msa0227200 MtrunA17_Chr5g0412271 44.767 172 78 6 1 160 1 167 8.48e-30 112
Msa0227200 MtrunA17_Chr8g0351031 38.298 188 100 6 1 175 1 185 2.04e-29 111
Msa0227200 MtrunA17_Chr5g0420091 39.726 146 82 2 1 141 1 145 2.92e-29 111
Msa0227200 MtrunA17_Chr5g0412461 40.237 169 87 4 1 158 1 166 3.27e-29 111
Msa0227200 MtrunA17_Chr7g0246431 39.597 149 83 3 1 144 1 147 4.31e-29 110
Msa0227200 MtrunA17_Chr4g0057151 40.588 170 88 5 1 160 1 167 7.79e-29 109
Msa0227200 MtrunA17_Chr8g0351041 40.397 151 80 4 1 144 1 148 9.68e-29 108
Msa0227200 MtrunA17_Chr4g0049541 37.500 192 93 8 1 175 1 182 1.26e-28 109
Msa0227200 MtrunA17_Chr5g0427401 42.105 171 82 7 1 160 1 165 2.03e-28 108
Msa0227200 MtrunA17_Chr1g0204111 40.136 147 80 3 1 141 17 161 2.28e-27 107
Msa0227200 MtrunA17_Chr4g0018421 37.162 148 86 2 1 142 1 147 1.19e-26 103
Msa0227200 MtrunA17_Chr4g0020221 40.940 149 79 3 1 142 1 147 2.65e-24 99.0
Msa0227200 MtrunA17_Chr1g0173161 61.429 70 26 1 1 70 1 69 3.96e-24 93.6
Msa0227200 MtrunA17_Chr7g0246381 61.290 62 24 0 1 62 1 62 5.81e-23 90.1
Msa0227200 MtrunA17_Chr2g0308251 64.407 59 21 0 1 59 1 59 2.05e-22 89.0
Msa0227200 MtrunA17_Chr4g0049901 36.757 185 87 6 1 172 27 194 4.05e-22 92.8
Msa0227200 MtrunA17_Chr5g0427921 57.627 59 25 0 1 59 1 59 7.73e-22 86.7
Msa0227200 MtrunA17_Chr8g0377561 64.912 57 20 0 1 57 1 57 5.17e-21 85.9
Msa0227200 MtrunA17_Chr4g0044071 59.649 57 23 0 1 57 1 57 1.03e-19 82.8
Msa0227200 MtrunA17_Chr5g0425191 57.895 57 24 0 1 57 1 57 4.65e-19 80.9
Msa0227200 MtrunA17_Chr3g0134451 54.930 71 31 1 1 71 1 70 3.39e-18 83.2
Msa0227200 MtrunA17_Chr8g0379021 45.714 70 36 1 2 71 12 79 2.43e-16 75.5
Msa0227200 MtrunA17_Chr5g0417661 58.491 53 22 0 1 53 56 108 4.01e-16 73.6
Msa0227200 MtrunA17_Chr4g0060841 62.264 53 20 0 1 53 1 53 5.99e-16 77.4
Msa0227200 MtrunA17_Chr1g0208581 48.571 70 34 1 2 71 9 76 1.76e-15 74.3
Msa0227200 MtrunA17_Chr2g0333981 44.615 65 36 0 1 65 11 75 2.12e-15 72.8
Msa0227200 MtrunA17_Chr1g0208561 47.143 70 35 1 2 71 9 76 3.31e-15 73.6
Msa0227200 MtrunA17_Chr3g0089141 47.143 70 35 1 2 71 9 76 3.45e-15 73.6
Msa0227200 MtrunA17_Chr1g0206701 29.609 179 91 7 2 172 9 160 1.38e-14 72.0
Msa0227200 MtrunA17_Chr3g0099421 50.000 70 33 1 2 71 34 101 1.40e-14 72.0
Msa0227200 MtrunA17_Chr2g0325971 45.714 70 36 1 2 71 9 76 2.71e-14 70.9
Msa0227200 MtrunA17_Chr5g0419601 45.070 71 37 1 1 71 8 76 3.15e-14 70.9
Msa0227200 MtrunA17_Chr4g0052081 53.333 60 28 0 1 60 1 60 3.46e-14 69.3
Msa0227200 MtrunA17_Chr1g0187361 45.714 70 36 1 2 71 9 76 3.91e-14 70.5
Msa0227200 MtrunA17_Chr2g0317451 45.714 70 36 1 2 71 9 76 5.14e-14 70.1
Msa0227200 MtrunA17_Chr2g0317481 45.714 70 36 1 2 71 9 76 5.79e-14 70.1
Msa0227200 MtrunA17_Chr1g0166611 55.556 45 20 0 13 57 17 61 6.25e-14 67.8
Msa0227200 MtrunA17_Chr1g0188671 47.143 70 35 1 2 71 47 114 6.27e-14 70.5
Msa0227200 MtrunA17_Chr2g0292791 45.714 70 36 1 2 71 9 76 7.46e-14 69.7
Msa0227200 MtrunA17_Chr8g0355091 46.479 71 34 2 2 71 9 76 8.47e-14 69.7
Msa0227200 MtrunA17_Chr5g0422941 35.455 110 62 2 2 104 9 116 1.16e-13 69.3
Msa0227200 MtrunA17_Chr3g0099411 44.286 70 37 1 2 71 9 76 1.38e-13 68.6
Msa0227200 MtrunA17_Chr8g0376821 40.000 65 39 0 1 65 1 65 1.55e-13 67.8
Msa0227200 MtrunA17_Chr4g0052061 32.117 137 82 4 1 130 1 133 1.78e-13 67.0
Msa0227200 MtrunA17_Chr1g0206721 44.286 70 37 1 2 71 9 76 1.87e-13 68.6
Msa0227200 MtrunA17_Chr1g0149391 48.485 66 33 1 2 66 9 74 2.53e-13 68.2
Msa0227200 MtrunA17_Chr1g0175611 40.000 65 39 0 1 65 1 65 2.75e-13 66.6
Msa0227200 MtrunA17_Chr1g0169761 40.000 65 39 0 1 65 1 65 3.57e-13 66.6
Msa0227200 MtrunA17_Chr8g0357771 41.935 62 36 0 1 62 1 62 5.03e-13 66.2
Msa0227200 MtrunA17_Chr1g0206991 42.857 70 38 1 2 71 9 76 5.07e-13 66.2
Msa0227200 MtrunA17_Chr1g0180591 30.345 145 71 5 1 121 1 139 9.32e-13 65.5
Msa0227200 MtrunA17_Chr1g0175601 40.000 65 39 0 1 65 1 65 9.97e-13 65.5
Msa0227200 MtrunA17_Chr5g0422421 48.485 66 33 1 2 66 9 74 1.00e-12 66.6
Msa0227200 MtrunA17_Chr4g0074101 36.923 65 41 0 1 65 1 65 2.13e-12 64.7
Msa0227200 MtrunA17_Chr6g0449851 46.774 62 33 0 1 62 1 62 3.23e-12 65.9
Msa0227200 MtrunA17_Chr2g0300421 46.667 60 32 0 2 61 9 68 6.86e-12 63.2
Msa0227200 MtrunA17_Chr8g0356071 40.000 65 39 0 1 65 1 65 7.23e-12 62.8
Msa0227200 MtrunA17_Chr3g0089151 41.429 70 39 1 2 71 9 76 7.68e-12 62.0
Msa0227200 MtrunA17_Chr2g0300441 31.783 129 67 4 2 111 7 133 1.09e-11 63.5
Msa0227200 MtrunA17_Chr3g0119901 38.028 71 42 1 1 71 8 76 1.42e-11 62.8
Msa0227200 MtrunA17_Chr4g0018951 49.153 59 26 2 14 71 24 79 1.61e-11 62.0
Msa0227200 MtrunA17_Chr6g0457851 30.172 116 66 3 1 101 11 126 1.64e-11 64.3
Msa0227200 MtrunA17_Chr3g0085241 38.028 71 42 1 1 71 40 108 4.21e-11 62.0
Msa0227200 MtrunA17_Chr3g0111841 45.000 60 33 0 8 67 2 61 6.21e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227200 AT5G20240.1 62.500 168 63 0 1 168 1 168 1.89e-71 219
Msa0227200 AT5G20240.2 67.133 143 47 0 1 143 1 143 2.44e-67 207
Msa0227200 AT3G54340.1 46.809 141 75 0 1 141 1 141 1.32e-39 139
Msa0227200 AT5G23260.1 39.394 165 98 1 1 163 17 181 2.79e-36 131
Msa0227200 AT5G23260.2 40.491 163 91 2 1 157 1 163 1.01e-35 129
Msa0227200 AT2G42830.2 44.898 147 74 2 1 142 16 160 1.01e-35 129
Msa0227200 AT2G42830.1 44.898 147 74 2 1 142 16 160 1.18e-35 129
Msa0227200 AT5G23260.4 40.491 163 91 2 1 157 17 179 1.82e-35 129
Msa0227200 AT3G58780.1 44.218 147 75 2 1 142 16 160 2.83e-35 128
Msa0227200 AT3G58780.5 44.218 147 75 2 1 142 22 166 3.46e-35 128
Msa0227200 AT5G23260.3 43.262 141 78 1 1 139 1 141 6.26e-35 127
Msa0227200 AT3G58780.4 43.836 146 75 2 1 141 16 159 1.22e-34 127
Msa0227200 AT3G58780.2 43.537 147 69 2 1 142 16 153 2.91e-34 125
Msa0227200 AT2G45650.1 44.521 146 75 2 1 142 1 144 1.11e-33 124
Msa0227200 AT5G13790.2 47.887 142 67 3 1 139 1 138 4.41e-33 123
Msa0227200 AT5G15800.1 47.260 146 71 3 1 141 1 145 6.83e-33 122
Msa0227200 AT5G15800.2 47.260 146 71 3 1 141 1 145 7.88e-33 122
Msa0227200 AT3G02310.2 48.227 141 67 3 1 136 1 140 1.05e-32 120
Msa0227200 AT5G13790.1 47.482 139 69 2 1 139 1 135 1.18e-32 121
Msa0227200 AT1G26310.1 37.561 205 96 5 1 198 1 180 2.36e-32 120
Msa0227200 AT1G24260.1 43.537 147 67 3 1 136 1 142 2.38e-32 120
Msa0227200 AT1G24260.3 43.243 148 67 3 1 136 1 143 2.71e-32 120
Msa0227200 AT3G58780.3 38.824 170 76 2 1 142 16 185 3.05e-32 120
Msa0227200 AT1G24260.2 43.243 148 67 3 1 136 1 143 3.49e-32 120
Msa0227200 AT2G14210.1 38.537 205 99 6 1 192 1 191 4.08e-32 119
Msa0227200 AT4G24540.1 45.562 169 81 5 1 160 1 167 4.21e-32 119
Msa0227200 AT4G09960.1 42.177 147 78 2 1 142 1 145 4.24e-32 119
Msa0227200 AT2G14210.2 38.537 205 99 6 1 192 1 191 4.55e-32 119
Msa0227200 AT4G09960.6 42.177 147 78 2 1 142 2 146 5.15e-32 119
Msa0227200 AT5G60910.1 40.816 196 97 6 1 187 1 186 5.63e-32 119
Msa0227200 AT1G69120.2 44.444 144 74 2 1 139 1 143 6.16e-32 119
Msa0227200 AT4G09960.5 42.177 147 78 2 1 142 11 155 7.05e-32 119
Msa0227200 AT3G02310.1 43.931 173 87 5 1 164 1 172 7.33e-32 119
Msa0227200 AT3G30260.1 43.448 145 74 3 1 139 1 143 9.12e-32 119
Msa0227200 AT1G69120.1 44.444 144 74 2 1 139 1 143 9.48e-32 119
Msa0227200 AT4G09960.2 42.361 144 76 2 1 139 1 142 1.15e-31 117
Msa0227200 AT4G09960.3 42.177 147 78 2 1 142 27 171 1.17e-31 119
Msa0227200 AT3G57230.1 37.500 176 86 4 1 161 1 167 1.88e-31 117
Msa0227200 AT3G57230.4 37.500 176 86 4 1 161 1 167 1.88e-31 117
Msa0227200 AT3G61120.1 44.218 147 73 3 1 142 1 143 2.92e-31 117
Msa0227200 AT3G57230.2 40.972 144 79 2 1 140 1 142 3.81e-31 114
Msa0227200 AT2G45660.1 39.412 170 92 3 1 161 1 168 5.43e-31 115
Msa0227200 AT2G45660.2 40.940 149 81 2 1 144 1 147 7.03e-31 114
Msa0227200 AT4G18960.1 43.151 146 76 2 2 142 18 161 7.90e-31 116
Msa0227200 AT3G57390.3 40.645 155 76 4 1 142 1 152 1.35e-30 115
Msa0227200 AT5G51870.4 38.202 178 88 4 1 159 1 175 1.64e-30 114
Msa0227200 AT4G09960.4 42.177 147 78 2 1 142 96 240 1.69e-30 117
Msa0227200 AT3G57390.1 40.645 155 76 4 1 142 1 152 2.32e-30 115
Msa0227200 AT5G51870.2 42.568 148 75 3 1 141 1 145 2.77e-30 112
Msa0227200 AT5G51870.3 38.202 178 88 4 1 159 11 185 2.85e-30 114
Msa0227200 AT5G51870.1 42.667 150 76 3 1 143 1 147 2.85e-30 114
Msa0227200 AT5G51870.5 42.568 148 75 3 1 141 24 168 5.17e-30 112
Msa0227200 AT2G03710.3 39.189 148 76 2 1 139 1 143 4.69e-29 110
Msa0227200 AT2G03710.1 39.161 143 83 2 1 139 1 143 1.14e-28 110
Msa0227200 AT2G03710.2 39.161 143 83 2 1 139 1 143 1.15e-28 110
Msa0227200 AT4G37940.3 38.000 150 73 3 1 139 1 141 6.20e-28 106
Msa0227200 AT4G22950.2 39.865 148 83 2 1 144 1 146 9.79e-28 106
Msa0227200 AT4G37940.4 38.000 150 73 3 1 139 1 141 1.58e-27 107
Msa0227200 AT4G37940.1 38.000 150 73 3 1 139 1 141 2.19e-27 107
Msa0227200 AT2G22540.3 40.000 170 89 4 1 160 1 167 2.57e-27 107
Msa0227200 AT2G22540.1 40.000 170 89 4 1 160 1 167 2.57e-27 107
Msa0227200 AT4G22950.3 40.541 148 82 2 1 144 1 146 4.09e-27 105
Msa0227200 AT4G22950.1 40.541 148 82 2 1 144 1 146 4.09e-27 105
Msa0227200 AT5G62165.17 38.710 155 76 5 1 144 1 147 1.31e-26 102
Msa0227200 AT5G62165.12 38.710 155 76 5 1 144 1 147 1.31e-26 102
Msa0227200 AT5G62165.11 38.710 155 76 5 1 144 1 147 1.31e-26 102
Msa0227200 AT4G11880.2 39.865 148 84 2 1 144 1 147 1.40e-26 103
Msa0227200 AT4G11880.3 39.865 148 84 2 1 144 1 147 1.40e-26 103
Msa0227200 AT5G62165.6 39.216 153 74 5 1 142 1 145 1.44e-26 102
Msa0227200 AT5G62165.9 39.216 153 74 5 1 142 1 145 1.44e-26 102
Msa0227200 AT5G62165.7 39.216 153 74 5 1 142 1 145 1.44e-26 102
Msa0227200 AT5G62165.8 39.216 153 74 5 1 142 1 145 1.44e-26 102
Msa0227200 AT5G62165.13 39.216 153 74 5 1 142 1 145 1.44e-26 102
Msa0227200 AT4G11880.4 39.865 148 84 2 1 144 1 147 1.52e-26 104
Msa0227200 AT4G11880.1 39.865 148 84 2 1 144 1 147 1.52e-26 104
Msa0227200 AT5G10140.2 40.816 147 73 3 1 142 1 138 2.75e-26 102
Msa0227200 AT5G10140.1 40.000 175 91 3 1 170 1 166 2.92e-26 102
Msa0227200 AT5G10140.3 40.816 147 73 3 1 142 1 138 3.84e-26 102
Msa0227200 AT5G10140.4 40.816 147 73 3 1 142 1 138 4.41e-26 102
Msa0227200 AT5G62165.3 39.053 169 85 6 1 160 1 160 6.61e-26 102
Msa0227200 AT5G62165.1 39.053 169 85 6 1 160 1 160 6.61e-26 102
Msa0227200 AT5G62165.2 39.053 169 85 6 1 160 1 160 6.61e-26 102
Msa0227200 AT5G62165.10 41.216 148 72 5 1 139 1 142 2.31e-25 100
Msa0227200 AT5G62165.4 41.216 148 72 5 1 139 1 142 2.31e-25 100
Msa0227200 AT2G22630.1 36.601 153 77 3 1 142 1 144 4.41e-25 100
Msa0227200 AT2G22630.2 36.601 153 77 3 1 142 1 144 4.41e-25 100
Msa0227200 AT2G22540.2 38.235 170 87 4 1 160 1 162 2.75e-24 99.0
Msa0227200 AT5G51860.2 32.990 194 108 4 1 188 1 178 2.25e-23 95.5
Msa0227200 AT5G51860.1 33.880 183 99 4 1 177 1 167 3.33e-23 95.1
Msa0227200 AT5G65070.1 33.728 169 104 3 1 165 1 165 2.80e-22 92.4
Msa0227200 AT5G62165.14 53.333 75 33 1 1 75 1 73 4.85e-22 89.0
Msa0227200 AT1G31140.2 37.333 150 84 3 1 142 1 148 5.30e-22 92.0
Msa0227200 AT5G65060.1 32.961 179 105 4 1 168 1 175 5.83e-22 91.7
Msa0227200 AT1G31140.1 34.932 146 91 2 1 142 1 146 1.22e-21 91.3
Msa0227200 AT1G71692.1 35.294 187 99 7 1 170 1 182 1.72e-21 90.5
Msa0227200 AT5G65060.3 34.146 164 100 3 1 160 1 160 3.96e-21 89.4
Msa0227200 AT5G65050.3 31.285 179 108 4 1 168 1 175 1.64e-20 87.8
Msa0227200 AT5G65050.2 32.317 164 103 3 1 160 1 160 1.87e-20 87.0
Msa0227200 AT5G65070.4 37.063 143 80 6 1 140 1 136 2.31e-20 85.9
Msa0227200 AT5G65050.5 32.990 194 99 8 1 178 1 179 2.60e-20 86.7
Msa0227200 AT5G65080.3 32.759 174 100 6 1 169 8 169 1.37e-19 85.1
Msa0227200 AT5G65060.2 32.961 179 94 6 1 168 1 164 1.88e-19 84.3
Msa0227200 AT5G65050.1 34.507 142 89 2 1 142 1 138 2.07e-19 84.3
Msa0227200 AT5G65070.2 31.373 204 107 5 1 172 1 203 2.30e-19 85.5
Msa0227200 AT5G65070.5 48.611 72 36 1 1 72 1 71 6.66e-19 83.6
Msa0227200 AT1G77980.1 52.113 71 33 1 1 71 1 70 1.88e-18 84.7
Msa0227200 AT1G77080.11 35.976 164 97 3 1 160 1 160 2.24e-18 81.3
Msa0227200 AT5G65070.3 30.622 209 103 6 1 172 1 204 2.78e-18 82.4
Msa0227200 AT1G22130.1 52.113 71 33 1 1 71 1 70 3.08e-18 84.0
Msa0227200 AT1G77080.4 35.196 179 102 4 1 169 1 175 4.54e-18 80.9
Msa0227200 AT5G65080.2 32.000 150 81 3 1 142 8 144 5.85e-18 80.9
Msa0227200 AT1G77080.5 35.976 164 97 3 1 160 1 160 5.87e-18 80.1
Msa0227200 AT1G18750.1 33.793 145 83 2 1 144 1 133 1.51e-17 82.4
Msa0227200 AT1G18750.4 44.156 77 43 0 1 77 1 77 1.86e-17 82.4
Msa0227200 AT1G18750.3 30.387 181 104 3 1 159 1 181 2.22e-17 82.4
Msa0227200 AT1G77950.3 50.704 71 34 1 1 71 1 70 1.33e-16 78.2
Msa0227200 AT1G77950.2 50.704 71 34 1 1 71 1 70 1.33e-16 78.2
Msa0227200 AT1G77950.1 50.704 71 34 1 1 71 1 70 1.33e-16 78.2
Msa0227200 AT1G77950.4 50.704 71 34 1 1 71 1 70 1.33e-16 78.2
Msa0227200 AT1G77080.2 35.976 164 93 3 1 160 1 156 2.08e-16 76.3
Msa0227200 AT1G77080.8 33.333 189 95 5 1 160 1 187 1.18e-15 75.1
Msa0227200 AT1G77080.12 36.620 142 82 2 1 142 1 134 1.38e-15 73.2
Msa0227200 AT4G37435.1 46.053 76 38 1 1 73 1 76 3.61e-15 72.8
Msa0227200 AT1G47760.1 32.000 150 84 4 1 142 1 140 4.41e-15 72.4
Msa0227200 AT2G03060.3 38.202 89 55 0 1 89 1 89 6.92e-15 74.7
Msa0227200 AT2G03060.7 38.202 89 55 0 1 89 1 89 6.92e-15 74.7
Msa0227200 AT2G03060.1 38.202 89 55 0 1 89 1 89 6.92e-15 74.7
Msa0227200 AT2G03060.2 38.202 89 55 0 1 89 1 89 7.01e-15 74.7
Msa0227200 AT1G01530.1 44.776 67 36 1 1 66 6 72 1.05e-13 70.1
Msa0227200 AT1G69540.1 54.717 53 24 0 1 53 1 53 1.10e-13 70.9
Msa0227200 AT1G69540.2 54.717 53 24 0 1 53 1 53 1.29e-13 70.9
Msa0227200 AT1G65360.1 41.667 72 40 1 1 72 6 75 1.61e-13 68.9
Msa0227200 AT2G34440.1 38.356 73 43 1 1 73 1 71 7.51e-13 65.9
Msa0227200 AT1G72350.1 38.636 88 50 1 2 89 43 126 2.00e-12 65.9
Msa0227200 AT4G36590.1 44.286 70 37 1 2 71 7 74 2.55e-12 65.9
Msa0227200 AT2G24840.1 42.254 71 39 1 1 71 62 130 2.92e-12 65.9
Msa0227200 AT3G04100.1 37.838 74 44 1 2 75 14 85 5.13e-12 64.3
Msa0227200 AT5G60440.1 36.047 86 51 2 2 87 7 88 5.60e-12 65.5
Msa0227200 AT3G66656.1 36.923 65 41 0 1 65 1 65 1.09e-11 62.8
Msa0227200 AT1G28460.1 45.312 64 35 0 2 65 8 71 3.34e-11 61.6
Msa0227200 AT1G29962.1 46.667 60 32 0 2 61 8 67 5.61e-11 60.8
Msa0227200 AT2G26320.1 39.437 71 43 0 1 71 17 87 5.74e-11 59.3

Find 57 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATTCTCTTTGGTGCTTC+TGG 0.183578 2_1:-77921155 Msa0227200:CDS
GTTAAGGTTGATTGATATTC+TGG 0.185614 2_1:-77921007 Msa0227200:intron
CAAGTTTCCCTTATTCTCTT+TGG 0.200754 2_1:-77921164 Msa0227200:CDS
CAGAAGCACCAAAGAGAATA+AGG 0.239625 2_1:+77921156 None:intergenic
AAGAACGCTGCTGCTGATTC+AGG 0.273424 2_1:-77916543 Msa0227200:CDS
TCCCTTGAAAATGGTCTTAC+TGG 0.307586 2_1:-77920260 Msa0227200:CDS
GATCTTGGAGGATGAAAATA+AGG 0.308110 2_1:-77919824 Msa0227200:CDS
TTATTTCCTTTGCTTTCTTA+AGG 0.309717 2_1:+77921204 None:intergenic
ATAAGGAATGGATTTCAAAT+TGG 0.322190 2_1:+77914547 None:intergenic
GCTTCTGATGATATGACTTC+TGG 0.342254 2_1:-77914160 Msa0227200:CDS
ATGCAGGCGAAACCGTATTC+TGG 0.353683 2_1:-77914510 Msa0227200:CDS
TACTGGTGTCCGTGAGAAAA+AGG 0.354637 2_1:-77920243 Msa0227200:intron
CGCCTGCATATATGTTCCTT+TGG 0.359073 2_1:+77914524 None:intergenic
TGAAATTGATAGAATCAAAA+AGG 0.362176 2_1:-77920465 Msa0227200:CDS
GACAGATACCAGAGAGCCTC+TGG 0.368842 2_1:-77920985 Msa0227200:CDS
CATATATGTTCCTTTGGATA+AGG 0.383241 2_1:+77914530 None:intergenic
CTTCTGGACTACTTGTCTTC+AGG 0.384796 2_1:-77914144 Msa0227200:CDS
CTGATTCAGGAATTAATCTA+AGG 0.389725 2_1:-77916530 Msa0227200:intron
TGAGGTTAGAACCATGGAAT+TGG 0.395974 2_1:-77916307 Msa0227200:CDS
AGAGAAGAGGAGAATACATT+AGG 0.399329 2_1:-77916570 Msa0227200:CDS
TATTGCTCAGGGAAAGATCT+TGG 0.406615 2_1:-77919839 Msa0227200:intron
CTTGAGGAATCCCTTGAAAA+TGG 0.411239 2_1:-77920269 Msa0227200:CDS
TTCTATCAATTTCATTGCTA+AGG 0.430130 2_1:+77920474 None:intergenic
ACTTATTCAAAGAGAAAGAA+TGG 0.449287 2_1:-77921230 Msa0227200:CDS
GGATTGAAAACTCAAGCAAC+AGG 0.469738 2_1:-77921259 Msa0227200:CDS
GAGCCTCTGGGAAAACCCTA+TGG 0.475629 2_1:-77920972 Msa0227200:CDS
TATTAATTTCAGGCACTTGA+AGG 0.478480 2_1:-77920333 Msa0227200:intron
GCTAGAAGAAGAAGATGGGA+AGG 0.493097 2_1:-77921301 None:intergenic
ATGTTCCTTTGGATAAGGAA+TGG 0.493455 2_1:+77914535 None:intergenic
GGGGTAAGATTGAGATCAAG+AGG 0.495877 2_1:-77921280 Msa0227200:CDS
AGAAGCACCAAAGAGAATAA+GGG 0.502470 2_1:+77921157 None:intergenic
AAGAGAAAAGTCAAGAGAAG+AGG 0.502959 2_1:-77916583 Msa0227200:CDS
AAGAAAACAGCTCCAGAATA+CGG 0.512774 2_1:+77914498 None:intergenic
GAAATCCATTCCTTATCCAA+AGG 0.527815 2_1:-77914540 Msa0227200:CDS
ATAAATGCTTACGTGGTGGA+AGG 0.533171 2_1:+77921110 None:intergenic
TAGAAGAAGAAGATGGGAAG+GGG 0.534165 2_1:-77921299 None:intergenic
CCTCATGCTTAGCATCCCAT+AGG 0.537774 2_1:+77920956 None:intergenic
TTTCAGGCACTTGAAGGGAG+AGG 0.544750 2_1:-77920327 Msa0227200:intron
ATTAATTTCAGGCACTTGAA+GGG 0.550773 2_1:-77920332 Msa0227200:intron
ATCCAAAGGAACATATATGC+AGG 0.556660 2_1:-77914526 Msa0227200:CDS
CATGGAATTGGATGAGATGT+TGG 0.559539 2_1:-77916295 Msa0227200:intron
TCCTACAGATGGAAGTGCAT+AGG 0.572079 2_1:-77920105 Msa0227200:intron
AGCCTCTGGGAAAACCCTAT+GGG 0.575896 2_1:-77920971 Msa0227200:CDS
ACAGCATGCAAATTGACCTC+AGG 0.580242 2_1:-77920436 Msa0227200:intron
TAAATGCTTACGTGGTGGAA+GGG 0.581861 2_1:+77921111 None:intergenic
CTAGAAGAAGAAGATGGGAA+GGG 0.582114 2_1:-77921300 None:intergenic
CAACATCTCATCCAATTCCA+TGG 0.582990 2_1:+77916296 None:intergenic
TGCTCAGGGAAAGATCTTGG+AGG 0.595250 2_1:-77919836 Msa0227200:intron
CTCATGCTTAGCATCCCATA+GGG 0.604792 2_1:+77920957 None:intergenic
ACAGATACCAGAGAGCCTCT+GGG 0.613351 2_1:-77920984 Msa0227200:CDS
CAAAGAGCTGATGTCCCTTG+AGG 0.627732 2_1:-77920285 Msa0227200:CDS
TGGAATCCTTAAGAAAGCAA+AGG 0.631436 2_1:-77921210 Msa0227200:CDS
GTGGACACAAAACAGAGTAG+TGG 0.680011 2_1:-77914465 Msa0227200:CDS
TGGTGAAATAGCTTCTGATG+AGG 0.681327 2_1:-77914239 Msa0227200:intron
CAGCTCTTTGTAATTCAGTG+AGG 0.683025 2_1:+77920298 None:intergenic
CCTATGGGATGCTAAGCATG+AGG 0.686598 2_1:-77920956 Msa0227200:intron
AAACAGAGTAGTGGAGAACG+TGG 0.737661 2_1:-77914456 Msa0227200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAATTAAATAAAA+AGG + chr2_1:77918393-77918412 None:intergenic 0.0%
!!! CATCTAATTTTTTTATTTTT+TGG - chr2_1:77914372-77914391 Msa0227200:intron 10.0%
!!! ATTTTTTTATTTTTTGGTTA+AGG - chr2_1:77914378-77914397 Msa0227200:intron 10.0%
!!! TTTGTTATTGAAAAATAATA+GGG + chr2_1:77915786-77915805 None:intergenic 10.0%
!!! ATTTGTTATTGAAAAATAAT+AGG + chr2_1:77915787-77915806 None:intergenic 10.0%
!! TTTAATACAATTTAAATTAG+TGG - chr2_1:77917207-77917226 Msa0227200:intron 10.0%
!!! TTTTTGAATAAAACTAATAT+CGG + chr2_1:77917601-77917620 None:intergenic 10.0%
!!! TTTTTGAATAAAACTAATAT+CGG + chr2_1:77917601-77917620 None:intergenic 10.0%
!!! TTTTTGAATAAAACTAATAT+CGG + chr2_1:77917601-77917620 None:intergenic 10.0%
!! AAATAATTAAATAAAAAGGA+GGG + chr2_1:77918389-77918408 None:intergenic 10.0%
!! AAAATAATTAAATAAAAAGG+AGG + chr2_1:77918390-77918409 None:intergenic 10.0%
!!! ATAGATATATATTTGTTATT+TGG - chr2_1:77918574-77918593 Msa0227200:intron 10.0%
!! ATATTATTTATTAGAATATG+AGG - chr2_1:77918623-77918642 Msa0227200:intron 10.0%
!!! TTTTTGTTTTTCTTTTTGTT+AGG - chr2_1:77914336-77914355 Msa0227200:intron 15.0%
!!! TTTTGTTTTTCTTTTTGTTA+GGG - chr2_1:77914337-77914356 Msa0227200:intron 15.0%
!! ATATAATATGTTATTGAGAA+AGG - chr2_1:77914620-77914639 Msa0227200:intron 15.0%
!!! TATTGTTCTTTTTTCTTTTT+TGG - chr2_1:77914880-77914899 Msa0227200:intron 15.0%
!!! ATTGTTCTTTTTTCTTTTTT+GGG - chr2_1:77914881-77914900 Msa0227200:intron 15.0%
!!! ATAAATTTTGATTATAGCTA+GGG + chr2_1:77915023-77915042 None:intergenic 15.0%
!!! TATAAATTTTGATTATAGCT+AGG + chr2_1:77915024-77915043 None:intergenic 15.0%
!! TTTATAAATATCATTGATCA+AGG - chr2_1:77915038-77915057 Msa0227200:intron 15.0%
!! TTATAAATATCATTGATCAA+GGG - chr2_1:77915039-77915058 Msa0227200:intron 15.0%
!!! TTTTGTTAGACATATAATTA+CGG + chr2_1:77915423-77915442 None:intergenic 15.0%
!! GTTAAGCAAAAATAAAAAAA+AGG + chr2_1:77915525-77915544 None:intergenic 15.0%
!! TCAATATTTATGTTCTAATA+TGG - chr2_1:77915681-77915700 Msa0227200:intron 15.0%
!!! TTAAAATAGTAATTTTGTCT+TGG - chr2_1:77916118-77916137 Msa0227200:intron 15.0%
!! TTCATTAAGTATCATATAAA+TGG + chr2_1:77916748-77916767 None:intergenic 15.0%
!! ATGATACTTAATGAATATAA+TGG - chr2_1:77916753-77916772 Msa0227200:intron 15.0%
!!! ATAATTGATTGCATTTTATA+TGG - chr2_1:77917271-77917290 Msa0227200:intron 15.0%
!!! TATTCAAAAATTTTTTTGAC+TGG - chr2_1:77917611-77917630 Msa0227200:intron 15.0%
!! ATATTTATATGATGTATATG+AGG - chr2_1:77918433-77918452 Msa0227200:intron 15.0%
!! TATTTATATGATGTATATGA+GGG - chr2_1:77918434-77918453 Msa0227200:intron 15.0%
!!! TATTTTGTTATGTTATATGT+TGG - chr2_1:77918519-77918538 Msa0227200:intron 15.0%
!!! TACCAGTTTTTTTTTAAATT+CGG + chr2_1:77919556-77919575 None:intergenic 15.0%
!! AACAAAAAAGTTTCAAAGAA+GGG + chr2_1:77914324-77914343 None:intergenic 20.0%
!! AAACAAAAAAGTTTCAAAGA+AGG + chr2_1:77914325-77914344 None:intergenic 20.0%
!!! ATTTTGCTAAAAATATGTTG+AGG - chr2_1:77914535-77914554 Msa0227200:CDS 20.0%
!! AAATAATCTTAGCAAAGAAA+AGG + chr2_1:77914717-77914736 None:intergenic 20.0%
!! ATCTAATACCTAGAAAATTA+AGG + chr2_1:77914752-77914771 None:intergenic 20.0%
!! TGAAATTGATAGAATCAAAA+AGG - chr2_1:77914936-77914955 Msa0227200:intron 20.0%
!! AAATATTTGTATAATACCTG+AGG + chr2_1:77914984-77915003 None:intergenic 20.0%
!!! AATTAATTACCTTTTTCTCA+CGG + chr2_1:77915170-77915189 None:intergenic 20.0%
!! AGAAAATGTTAATTAGTAAG+TGG - chr2_1:77915828-77915847 Msa0227200:intron 20.0%
!!! ATTTTGCTTATAATAGTGAT+CGG + chr2_1:77915965-77915984 None:intergenic 20.0%
!! TATTCAATGTATCTAAAAAG+TGG + chr2_1:77915989-77916008 None:intergenic 20.0%
!!! TTTTTAACATATACTCCATA+CGG + chr2_1:77916096-77916115 None:intergenic 20.0%
!!! CAATATCAATTAGTTTACTA+TGG - chr2_1:77916252-77916271 Msa0227200:intron 20.0%
!! TGTTGATCAAAAATGAAAAA+AGG + chr2_1:77916378-77916397 None:intergenic 20.0%
!!! AATCACTTCATAACATATTT+TGG + chr2_1:77916682-77916701 None:intergenic 20.0%
!!! ATATAATGGTTCGTTTTTTT+TGG - chr2_1:77916767-77916786 Msa0227200:intron 20.0%
!!! TTTTTGGTTACAGAATATAA+TGG - chr2_1:77916783-77916802 Msa0227200:intron 20.0%
!! CAAATTTATGGTAACTTATA+AGG + chr2_1:77916826-77916845 None:intergenic 20.0%
!!! TCTAATATTTTATGAGTCTT+AGG - chr2_1:77916944-77916963 Msa0227200:intron 20.0%
!! TCATATCAACATTTGTTTAA+GGG + chr2_1:77916987-77917006 None:intergenic 20.0%
!! TTCATATCAACATTTGTTTA+AGG + chr2_1:77916988-77917007 None:intergenic 20.0%
!! AAAAATAATTATGTGTGAAG+CGG - chr2_1:77917514-77917533 Msa0227200:intron 20.0%
!!! ATTTATTGATATGACTTTTG+AGG - chr2_1:77917546-77917565 Msa0227200:intron 20.0%
!!! AATTTTTTAAAAGCGTTCAA+TGG + chr2_1:77917724-77917743 None:intergenic 20.0%
!!! ATTCAAAAAACTTTTTTGAC+TGG - chr2_1:77917759-77917778 Msa0227200:intron 20.0%
!!! AATTTTTTAAAAGCGTTCAA+CGG + chr2_1:77917724-77917743 None:intergenic 20.0%
!!! ATTCAAAAATCTTTTTTGAC+TGG - chr2_1:77917894-77917913 Msa0227200:intron 20.0%
!!! ATTCAAAAATCTTTTTTGAC+TGG - chr2_1:77917894-77917913 Msa0227200:intron 20.0%
!! AATATAAATTAAATCGTCGT+CGG + chr2_1:77918272-77918291 None:intergenic 20.0%
!! TATTATAAATAGAGAAGCTT+AGG - chr2_1:77918731-77918750 Msa0227200:intron 20.0%
!! TAGGGTTTAATAATTGTAAT+AGG - chr2_1:77919142-77919161 Msa0227200:intron 20.0%
!! ATAATTAGTGTTCTAATGAT+AGG - chr2_1:77919215-77919234 Msa0227200:intron 20.0%
!! TAATTAGTGTTCTAATGATA+GGG - chr2_1:77919216-77919235 Msa0227200:intron 20.0%
!! TTCCGAATTTAAAAAAAAAC+TGG - chr2_1:77919551-77919570 Msa0227200:intron 20.0%
!!! TGATATCTTTCCAATAATTT+TGG - chr2_1:77919821-77919840 Msa0227200:CDS 20.0%
!! ATTACACAGAAAATTGTTTA+AGG - chr2_1:77920507-77920526 Msa0227200:intron 20.0%
! ACTTATTCAAAGAGAAAGAA+TGG - chr2_1:77914171-77914190 Msa0227200:CDS 25.0%
! TTATTTCCTTTGCTTTCTTA+AGG + chr2_1:77914200-77914219 None:intergenic 25.0%
! AACATATATAAATGCTTACG+TGG + chr2_1:77914301-77914320 None:intergenic 25.0%
! GTATTAGATAACAAAGATGA+TGG - chr2_1:77914763-77914782 Msa0227200:intron 25.0%
!! GAAGTCAAAAATGAACATTT+TGG + chr2_1:77914851-77914870 None:intergenic 25.0%
!!! TTTTTCTTTTTTGGGTGTTT+TGG - chr2_1:77914889-77914908 Msa0227200:intron 25.0%
! TTCTATCAATTTCATTGCTA+AGG + chr2_1:77914930-77914949 None:intergenic 25.0%
! AGGGTACATATATTAATTTC+AGG - chr2_1:77915058-77915077 Msa0227200:intron 25.0%
! TAATAAGCCCTGATATATAT+AGG - chr2_1:77915705-77915724 Msa0227200:intron 25.0%
! AACTAAAAGCTTTCAACAAT+TGG + chr2_1:77915906-77915925 None:intergenic 25.0%
!!! TTGTTGAAAGCTTTTAGTTA+AGG - chr2_1:77915907-77915926 Msa0227200:intron 25.0%
!!! TGTTGAAAGCTTTTAGTTAA+GGG - chr2_1:77915908-77915927 Msa0227200:intron 25.0%
! ATGTATCTAGTCTACAATAA+AGG + chr2_1:77916026-77916045 None:intergenic 25.0%
! TGTTTAATGCAATTGTTGAT+TGG + chr2_1:77916335-77916354 None:intergenic 25.0%
! ACATTCTTTCTAATGATCAA+TGG + chr2_1:77916528-77916547 None:intergenic 25.0%
!!! GAATGTATGTTGCTTTAATA+TGG - chr2_1:77916542-77916561 Msa0227200:CDS 25.0%
! TACGTGTATTATCTAAGTAT+TGG - chr2_1:77916584-77916603 Msa0227200:CDS 25.0%
! ACGTGTATTATCTAAGTATT+GGG - chr2_1:77916585-77916604 Msa0227200:CDS 25.0%
! TTGTTTGGCATTTCTAATAT+CGG - chr2_1:77916608-77916627 Msa0227200:CDS 25.0%
!! ATTTGTTAATGAAAGGTCTT+TGG - chr2_1:77916635-77916654 Msa0227200:intron 25.0%
! TGTTATGAAGTGATTGAATT+TGG - chr2_1:77916687-77916706 Msa0227200:intron 25.0%
!! TGATTGAATTTGGTTTCATA+TGG - chr2_1:77916697-77916716 Msa0227200:intron 25.0%
! TTACAGAATATAATGGTTCT+AGG - chr2_1:77916790-77916809 Msa0227200:intron 25.0%
!!! AATCACACCAAACAATTTTT+TGG - chr2_1:77917006-77917025 Msa0227200:intron 25.0%
! ATATTTGAATTGCATGCATT+TGG - chr2_1:77917070-77917089 Msa0227200:intron 25.0%
!! ATTTTATATGGTCCATTTTG+AGG - chr2_1:77917283-77917302 Msa0227200:intron 25.0%
!!! ATTATTTTTAACACGTCATG+TGG - chr2_1:77917413-77917432 Msa0227200:intron 25.0%
!!! AATTCTTTAAAAGCGTTCAA+CGG + chr2_1:77917577-77917596 None:intergenic 25.0%
! ACAATTGATAAAAAAAGTCG+AGG - chr2_1:77918230-77918249 Msa0227200:intron 25.0%
! TACCAACTAAGATAAGTTAA+CGG + chr2_1:77918351-77918370 None:intergenic 25.0%
!! TTAACTTATCTTAGTTGGTA+GGG - chr2_1:77918351-77918370 Msa0227200:intron 25.0%
! TATTCTTCCCAAATCTATTT+AGG + chr2_1:77918705-77918724 None:intergenic 25.0%
! TTAGATTGCATCTAATAAGT+TGG - chr2_1:77918937-77918956 Msa0227200:intron 25.0%
! TAGATTGCATCTAATAAGTT+GGG - chr2_1:77918938-77918957 Msa0227200:intron 25.0%
! TTTGTGAGAATTTGAGAATT+AGG - chr2_1:77918966-77918985 Msa0227200:intron 25.0%
! TTGTGAGAATTTGAGAATTA+GGG - chr2_1:77918967-77918986 Msa0227200:intron 25.0%
! ATAACCCATATGATGATTAT+TGG - chr2_1:77919062-77919081 Msa0227200:intron 25.0%
! ACATCCAATAATCATCATAT+GGG + chr2_1:77919069-77919088 None:intergenic 25.0%
! TACATCCAATAATCATCATA+TGG + chr2_1:77919070-77919089 None:intergenic 25.0%
! TTACTGTATGCAAATTCAAA+GGG + chr2_1:77919187-77919206 None:intergenic 25.0%
! TAATCATAGGGTAATGATTA+GGG - chr2_1:77919239-77919258 Msa0227200:intron 25.0%
! GATTTATAGAACTTGAGTTA+TGG - chr2_1:77919474-77919493 Msa0227200:intron 25.0%
!! TAGGTCACATTGAATTTTTA+TGG - chr2_1:77919512-77919531 Msa0227200:intron 25.0%
!!! AAAAAAAAACTGGTACTGAT+CGG - chr2_1:77919561-77919580 Msa0227200:intron 25.0%
!!! TAATTTTGTTAGCTTTCCAA+TGG - chr2_1:77919623-77919642 Msa0227200:intron 25.0%
! TCATGTCAAACCAAAATTAT+TGG + chr2_1:77919834-77919853 None:intergenic 25.0%
! TTTGACATGAAAATATGTTG+TGG - chr2_1:77919844-77919863 Msa0227200:intron 25.0%
!!! CTGTGTAATTTTGTTTAGTT+AGG + chr2_1:77920496-77920515 None:intergenic 25.0%
!! ATTTCAAATTGGTTCTTCAT+AGG + chr2_1:77920846-77920865 None:intergenic 25.0%
!! ATAAGGAATGGATTTCAAAT+TGG + chr2_1:77920857-77920876 None:intergenic 25.0%
ATATATAAATGCTTACGTGG+TGG + chr2_1:77914298-77914317 None:intergenic 30.0%
! GTTAAGGTTGATTGATATTC+TGG - chr2_1:77914394-77914413 Msa0227200:intron 30.0%
TCTCAATATATGAACAGATC+TGG - chr2_1:77914667-77914686 Msa0227200:intron 30.0%
! AGCTGAATCCTTAATTTTCT+AGG - chr2_1:77914741-77914760 Msa0227200:intron 30.0%
TATTAATTTCAGGCACTTGA+AGG - chr2_1:77915068-77915087 Msa0227200:intron 30.0%
ATTAATTTCAGGCACTTGAA+GGG - chr2_1:77915069-77915088 Msa0227200:intron 30.0%
GACAAACAAAGAAAACTGTA+AGG + chr2_1:77915278-77915297 None:intergenic 30.0%
!! TCCTTTTGATCACTTTTCAA+GGG + chr2_1:77915453-77915472 None:intergenic 30.0%
!! TTCCTTTTGATCACTTTTCA+AGG + chr2_1:77915454-77915473 None:intergenic 30.0%
! TAAGGAACTCAATTTTCTTC+TGG - chr2_1:77915595-77915614 Msa0227200:intron 30.0%
TCATGAGCCTATATATATCA+GGG + chr2_1:77915715-77915734 None:intergenic 30.0%
ATCATGAGCCTATATATATC+AGG + chr2_1:77915716-77915735 None:intergenic 30.0%
TGATATATATAGGCTCATGA+TGG - chr2_1:77915715-77915734 Msa0227200:intron 30.0%
! GCTTTCAACAATTGGTAATT+GGG + chr2_1:77915898-77915917 None:intergenic 30.0%
! AGCTTTCAACAATTGGTAAT+TGG + chr2_1:77915899-77915918 None:intergenic 30.0%
! ATCAATTAGTTTACTATGGC+TGG - chr2_1:77916256-77916275 Msa0227200:intron 30.0%
ATGGATTTAACCAGATCATA+AGG - chr2_1:77916443-77916462 Msa0227200:intron 30.0%
CTAATGATCAATGGCTATTT+AGG + chr2_1:77916519-77916538 None:intergenic 30.0%
!! TATCTAAGTATTGGGTTGTT+TGG - chr2_1:77916593-77916612 Msa0227200:CDS 30.0%
! CGGTAGTATTTGTTAATGAA+AGG - chr2_1:77916628-77916647 Msa0227200:intron 30.0%
GAAAAGTCATATACGTACAA+AGG - chr2_1:77916881-77916900 Msa0227200:intron 30.0%
! ATTTTATGAGTCTTAGGACA+AGG - chr2_1:77916950-77916969 Msa0227200:intron 30.0%
! AATAATATGCTTGCGTCTTT+TGG - chr2_1:77917349-77917368 Msa0227200:intron 30.0%
TGAGATAAATATGCCTTAAC+CGG - chr2_1:77918047-77918066 Msa0227200:intron 30.0%
ATAAAAAAAGTCGAGGATCA+TGG - chr2_1:77918237-77918256 Msa0227200:intron 30.0%
GTTAACTTATCTTAGTTGGT+AGG - chr2_1:77918350-77918369 Msa0227200:intron 30.0%
! ATTATTAGTGTGAGTGGATT+TGG - chr2_1:77918646-77918665 Msa0227200:intron 30.0%
! TTATTAGTGTGAGTGGATTT+GGG - chr2_1:77918647-77918666 Msa0227200:intron 30.0%
TAGAAAGAAGAGTAAGTTGT+TGG - chr2_1:77918678-77918697 Msa0227200:intron 30.0%
AGAAAGAAGAGTAAGTTGTT+GGG - chr2_1:77918679-77918698 Msa0227200:intron 30.0%
! TTTCCAAAAAAGCGGTTTTA+GGG + chr2_1:77918771-77918790 None:intergenic 30.0%
! TTTTCCAAAAAAGCGGTTTT+AGG + chr2_1:77918772-77918791 None:intergenic 30.0%
CTGATTCAGGAATTAATCTA+AGG - chr2_1:77918871-77918890 Msa0227200:intron 30.0%
AGATTGCATCTAATAAGTTG+GGG - chr2_1:77918939-77918958 Msa0227200:intron 30.0%
! ATCATCATATGGGTTATCTA+AGG + chr2_1:77919059-77919078 None:intergenic 30.0%
!! GATTATTGGATGTAGTTTTG+AGG - chr2_1:77919076-77919095 Msa0227200:intron 30.0%
! TGTTGGTGAGTTTAAGAATT+AGG - chr2_1:77919123-77919142 Msa0227200:intron 30.0%
! GTTGGTGAGTTTAAGAATTA+GGG - chr2_1:77919124-77919143 Msa0227200:intron 30.0%
CTTACTGTATGCAAATTCAA+AGG + chr2_1:77919188-77919207 None:intergenic 30.0%
TCTAATGATAGGGTAATCAT+AGG - chr2_1:77919226-77919245 Msa0227200:intron 30.0%
CTAATGATAGGGTAATCATA+GGG - chr2_1:77919227-77919246 Msa0227200:intron 30.0%
GTAATCATAGGGTAATGATT+AGG - chr2_1:77919238-77919257 Msa0227200:intron 30.0%
AAACACAAAAGTTGTAGGTA+TGG - chr2_1:77919413-77919432 Msa0227200:intron 30.0%
TTTGACGTCAAAATGATGTT+TGG - chr2_1:77919652-77919671 Msa0227200:intron 30.0%
AGTTATGATGAGAATACTAC+AGG - chr2_1:77919681-77919700 Msa0227200:intron 30.0%
GTTATGATGAGAATACTACA+GGG - chr2_1:77919682-77919701 Msa0227200:intron 30.0%
CTTAACATCTTGACAACATA+TGG + chr2_1:77920034-77920053 None:intergenic 30.0%
TGTTATGTTGTCAAGATTGA+AGG - chr2_1:77920124-77920143 Msa0227200:intron 30.0%
ATCAGTGTATTCAGTTGTTT+AGG + chr2_1:77920206-77920225 None:intergenic 30.0%
AACACTTGATATACAATCAG+AGG - chr2_1:77920533-77920552 Msa0227200:intron 30.0%
TCTTTCACACCTCTATATAA+AGG + chr2_1:77920737-77920756 None:intergenic 30.0%
CATATATGTTCCTTTGGATA+AGG + chr2_1:77920874-77920893 None:intergenic 30.0%
AAACACAAACAAAGGATTAG+TGG + chr2_1:77921063-77921082 None:intergenic 30.0%
TCAATGTAAAAGCTGTCTAT+TGG + chr2_1:77921092-77921111 None:intergenic 30.0%
TGGAATCCTTAAGAAAGCAA+AGG - chr2_1:77914191-77914210 Msa0227200:CDS 35.0%
CAAGTTTCCCTTATTCTCTT+TGG - chr2_1:77914237-77914256 Msa0227200:intron 35.0%
!! AGAAGCACCAAAGAGAATAA+GGG + chr2_1:77914247-77914266 None:intergenic 35.0%
! AGATCTAGTCAGAGAGTTTT+TGG + chr2_1:77914569-77914588 None:intergenic 35.0%
TCTCTGACTAGATCTACATT+TGG - chr2_1:77914574-77914593 Msa0227200:intron 35.0%
!! TGAACATTTTGGTGTAGATC+TGG + chr2_1:77914840-77914859 None:intergenic 35.0%
!! ATTTTCAAGGGATTCCTCAA+GGG + chr2_1:77915133-77915152 None:intergenic 35.0%
! ACCAGTAAGACCATTTTCAA+GGG + chr2_1:77915145-77915164 None:intergenic 35.0%
! TTCTTTGTTTGTCCTACAGA+TGG - chr2_1:77915285-77915304 Msa0227200:intron 35.0%
TCCCTTGAAAAGTGATCAAA+AGG - chr2_1:77915449-77915468 Msa0227200:intron 35.0%
TGATTCCTTTGATATTGCTC+AGG - chr2_1:77915550-77915569 Msa0227200:intron 35.0%
GATTCCTTTGATATTGCTCA+GGG - chr2_1:77915551-77915570 Msa0227200:intron 35.0%
GATCTTGGAGGATGAAAATA+AGG - chr2_1:77915577-77915596 Msa0227200:intron 35.0%
! CTCAATTTTCTTCTGGTAAG+TGG - chr2_1:77915602-77915621 Msa0227200:intron 35.0%
! AATTTTCTTCTGGTAAGTGG+TGG - chr2_1:77915605-77915624 Msa0227200:intron 35.0%
GAGTTGAAGAGCTAACTTAT+TGG + chr2_1:77915863-77915882 None:intergenic 35.0%
TGCTTATAATAGTGATCGGA+GGG + chr2_1:77915961-77915980 None:intergenic 35.0%
TTGCTTATAATAGTGATCGG+AGG + chr2_1:77915962-77915981 None:intergenic 35.0%
TGCTTATAATAGTGACCGTA+TGG - chr2_1:77916078-77916097 Msa0227200:intron 35.0%
TTATGATGGTCCTTATGATC+TGG + chr2_1:77916456-77916475 None:intergenic 35.0%
AGATCATAAGGACCATCATA+AGG - chr2_1:77916455-77916474 Msa0227200:intron 35.0%
GATCATAAGGACCATCATAA+GGG - chr2_1:77916456-77916475 Msa0227200:intron 35.0%
TCAAACCAAATCCCTTATGA+TGG + chr2_1:77916470-77916489 None:intergenic 35.0%
! TTTGGACAGTTTAGAGTCTA+CGG + chr2_1:77916664-77916683 None:intergenic 35.0%
AAGTCATATACGTACAAAGG+TGG - chr2_1:77916884-77916903 Msa0227200:intron 35.0%
AAATCATCGAAGGCTTAATG+CGG - chr2_1:77916908-77916927 Msa0227200:intron 35.0%
GCTCAAGCCAAAAAATTGTT+TGG + chr2_1:77917016-77917035 None:intergenic 35.0%
!!! ACAATTTTTTGGCTTGAGCT+TGG - chr2_1:77917017-77917036 Msa0227200:intron 35.0%
!!! CAATTTTTTGGCTTGAGCTT+GGG - chr2_1:77917018-77917037 Msa0227200:intron 35.0%
! TAAGAAGTATGTCGTTGTGT+TGG - chr2_1:77917163-77917182 Msa0227200:intron 35.0%
AACAACATCTAGCCTCAAAA+TGG + chr2_1:77917298-77917317 None:intergenic 35.0%
!!! GAGGCTAGATGTTGTTTTTA+AGG - chr2_1:77917302-77917321 Msa0227200:intron 35.0%
!! AAAGGTTTAGTTTGAAGGAC+CGG + chr2_1:77918069-77918088 None:intergenic 35.0%
! ATGACTGAACAAGTCACTTT+GGG + chr2_1:77918164-77918183 None:intergenic 35.0%
TATGACTGAACAAGTCACTT+TGG + chr2_1:77918165-77918184 None:intergenic 35.0%
! CAGTCATATCTAGTTCACTT+AGG - chr2_1:77918177-77918196 Msa0227200:intron 35.0%
CTCCGTTAACTTATCTTAGT+TGG - chr2_1:77918346-77918365 Msa0227200:intron 35.0%
ATGAGGATTATTAGTGTGAG+TGG - chr2_1:77918640-77918659 Msa0227200:intron 35.0%
! TATTAGTGTGAGTGGATTTG+GGG - chr2_1:77918648-77918667 Msa0227200:intron 35.0%
TTGTTGGGCCTAAATAGATT+TGG - chr2_1:77918694-77918713 Msa0227200:intron 35.0%
TGTTGGGCCTAAATAGATTT+GGG - chr2_1:77918695-77918714 Msa0227200:intron 35.0%
!!! TTACCCTAAAACCGCTTTTT+TGG - chr2_1:77918765-77918784 Msa0227200:intron 35.0%
!!! AAACCGCTTTTTTGGAAAAG+AGG - chr2_1:77918773-77918792 Msa0227200:intron 35.0%
! TCTCCTCTTTTCCAAAAAAG+CGG + chr2_1:77918779-77918798 None:intergenic 35.0%
AAGAGAAAAGTCAAGAGAAG+AGG - chr2_1:77918818-77918837 Msa0227200:intron 35.0%
AGAGAAGAGGAGAATACATT+AGG - chr2_1:77918831-77918850 Msa0227200:intron 35.0%
! TCAGGAATTAATCTAAGGTG+AGG - chr2_1:77918876-77918895 Msa0227200:intron 35.0%
! CAGGAATTAATCTAAGGTGA+GGG - chr2_1:77918877-77918896 Msa0227200:intron 35.0%
!!! TAGTTTTGAGGTTAGAACCA+TGG - chr2_1:77919088-77919107 Msa0227200:intron 35.0%
GTAATGATTAGGGTCAAGTT+TGG - chr2_1:77919249-77919268 Msa0227200:intron 35.0%
GGTGTAAACACAAAAGTTGT+AGG - chr2_1:77919408-77919427 Msa0227200:intron 35.0%
GCAAAAACATGAAACAGAGA+AGG + chr2_1:77919736-77919755 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG - chr2_1:77920143-77920162 Msa0227200:intron 35.0%
AGGTGAGAAAAACACAAGAA+GGG - chr2_1:77920144-77920163 Msa0227200:intron 35.0%
TGATCAGAATCTAAATGCAG+CGG - chr2_1:77920257-77920276 Msa0227200:CDS 35.0%
ACGACACAAAGCAATTATAC+TGG - chr2_1:77920304-77920323 Msa0227200:CDS 35.0%
TACTCTTAGTGAAATCTCCT+TGG + chr2_1:77920372-77920391 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG + chr2_1:77920466-77920485 None:intergenic 35.0%
CAAATCAGATACAGACTCAA+TGG - chr2_1:77920567-77920586 Msa0227200:intron 35.0%
GTCTTCACTCCTTTATATAG+AGG - chr2_1:77920725-77920744 Msa0227200:intron 35.0%
CAAATCAGGCAAAAGATCAT+TGG + chr2_1:77920815-77920834 None:intergenic 35.0%
! CAATGATCTTTTGCCTGATT+TGG - chr2_1:77920813-77920832 Msa0227200:intron 35.0%
GAAATCCATTCCTTATCCAA+AGG - chr2_1:77920861-77920880 Msa0227200:intron 35.0%
ATGTTCCTTTGGATAAGGAA+TGG + chr2_1:77920869-77920888 None:intergenic 35.0%
ATCCAAAGGAACATATATGC+AGG - chr2_1:77920875-77920894 Msa0227200:intron 35.0%
AAGAAAACAGCTCCAGAATA+CGG + chr2_1:77920906-77920925 None:intergenic 35.0%
!! GTCATTTCAAAGGTGTTTGA+AGG + chr2_1:77921028-77921047 None:intergenic 35.0%
! TTTTGCAACGGTCATTTCAA+AGG + chr2_1:77921038-77921057 None:intergenic 35.0%
!! GGATTAGTGGAATTTTGCAA+CGG + chr2_1:77921050-77921069 None:intergenic 35.0%
GGATTCGAAAACACAAACAA+AGG + chr2_1:77921071-77921090 None:intergenic 35.0%
GGATTGAAAACTCAAGCAAC+AGG - chr2_1:77914142-77914161 Msa0227200:CDS 40.0%
!! CAGAAGCACCAAAGAGAATA+AGG + chr2_1:77914248-77914267 None:intergenic 40.0%
!! CTTATTCTCTTTGGTGCTTC+TGG - chr2_1:77914246-77914265 Msa0227200:intron 40.0%
! TAAATGCTTACGTGGTGGAA+GGG + chr2_1:77914293-77914312 None:intergenic 40.0%
! ATAAATGCTTACGTGGTGGA+AGG + chr2_1:77914294-77914313 None:intergenic 40.0%
!! TGTAGATCTGGTTCTAAAGC+TGG + chr2_1:77914828-77914847 None:intergenic 40.0%
CAGCTCTTTGTAATTCAGTG+AGG + chr2_1:77915106-77915125 None:intergenic 40.0%
!! CATTTTCAAGGGATTCCTCA+AGG + chr2_1:77915134-77915153 None:intergenic 40.0%
CTTGAGGAATCCCTTGAAAA+TGG - chr2_1:77915132-77915151 Msa0227200:intron 40.0%
! TCCCTTGAAAATGGTCTTAC+TGG - chr2_1:77915141-77915160 Msa0227200:intron 40.0%
! CACCAGTAAGACCATTTTCA+AGG + chr2_1:77915146-77915165 None:intergenic 40.0%
CTTTCCCTGAGCAATATCAA+AGG + chr2_1:77915558-77915577 None:intergenic 40.0%
TATTGCTCAGGGAAAGATCT+TGG - chr2_1:77915562-77915581 Msa0227200:intron 40.0%
TGATCAACAGCAACAGCATA+TGG - chr2_1:77916389-77916408 Msa0227200:intron 40.0%
AAGGACCATCATAAGGGATT+TGG - chr2_1:77916462-77916481 Msa0227200:intron 40.0%
CAAAGGTGGTAAATCATCGA+AGG - chr2_1:77916898-77916917 Msa0227200:intron 40.0%
! TTGTGTTGGTCCAAGTCAAA+GGG - chr2_1:77917177-77917196 Msa0227200:intron 40.0%
GTTCGACTATTTGAGTGCTT+AGG - chr2_1:77917233-77917252 Msa0227200:intron 40.0%
! TTAGTTTGAAGGACCGGTTA+AGG + chr2_1:77918063-77918082 None:intergenic 40.0%
GGTCCTTCAAACTAAACCTT+TGG - chr2_1:77918068-77918087 Msa0227200:intron 40.0%
!! CGTCCAAAGGTTTAGTTTGA+AGG + chr2_1:77918074-77918093 None:intergenic 40.0%
TATTTCACTCGATCGTCCAA+AGG + chr2_1:77918087-77918106 None:intergenic 40.0%
TTGGACGATCGAGTGAAATA+TGG - chr2_1:77918087-77918106 Msa0227200:intron 40.0%
! ATTAGTGTGAGTGGATTTGG+GGG - chr2_1:77918649-77918668 Msa0227200:intron 40.0%
GTATTGGATCGAATACGAAG+TGG - chr2_1:77919275-77919294 Msa0227200:intron 40.0%
TTCAGCTGCGATTTCACTTT+GGG + chr2_1:77919311-77919330 None:intergenic 40.0%
! ACGAGTTTAAGTTCCGAACT+GGG - chr2_1:77919381-77919400 Msa0227200:intron 40.0%
TTAAGTTCCGAACTGGGTTT+AGG - chr2_1:77919387-77919406 Msa0227200:intron 40.0%
GTTTACACCTAAACCCAGTT+CGG + chr2_1:77919397-77919416 None:intergenic 40.0%
!! TGTTAGCTTTCTAATGCCGT+TGG - chr2_1:77919437-77919456 Msa0227200:intron 40.0%
ATGGTCAAATTACTGCACGT+AGG - chr2_1:77919493-77919512 Msa0227200:intron 40.0%
!! ATCGGTACAGAATTGGTCTT+AGG - chr2_1:77919579-77919598 Msa0227200:intron 40.0%
!! TGTTAGCTTTCCAATGGCTT+TGG - chr2_1:77919629-77919648 Msa0227200:intron 40.0%
ATGATGAGAATACTACAGGG+AGG - chr2_1:77919685-77919704 Msa0227200:intron 40.0%
GAGGTCTTAGCGAAATTGTA+CGG - chr2_1:77919704-77919723 Msa0227200:intron 40.0%
GGTGAGAAAAACACAAGAAG+GGG - chr2_1:77920145-77920164 Msa0227200:intron 40.0%
GTGAGAAAAACACAAGAAGG+GGG - chr2_1:77920146-77920165 Msa0227200:intron 40.0%
TGAGAAAAACACAAGAAGGG+GGG - chr2_1:77920147-77920166 Msa0227200:intron 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG + chr2_1:77920361-77920380 None:intergenic 40.0%
ATGCAGAACAATTTCAGCAG+AGG - chr2_1:77920639-77920658 Msa0227200:intron 40.0%
GAACAATTTCAGCAGAGGTT+TGG - chr2_1:77920644-77920663 Msa0227200:intron 40.0%
! GGAGTGAAGACTTAGAGTTT+TGG + chr2_1:77920716-77920735 None:intergenic 40.0%
AAGCTTCAACAACGACTCTT+TGG + chr2_1:77920783-77920802 None:intergenic 40.0%
CATAGGACAACAACCAAATC+AGG + chr2_1:77920829-77920848 None:intergenic 40.0%
! TGTTTTCTTGTCTTGTAGCG+TGG - chr2_1:77920917-77920936 Msa0227200:intron 40.0%
TGGTGAAATAGCTTCTGATG+AGG - chr2_1:77921162-77921181 Msa0227200:CDS 40.0%
GCTTCTGATGATATGACTTC+TGG - chr2_1:77921202-77921221 Msa0227200:CDS 40.0%
GGGGTAAGATTGAGATCAAG+AGG - chr2_1:77914121-77914140 Msa0227200:CDS 45.0%
CTCATGCTTAGCATCCCATA+GGG + chr2_1:77914447-77914466 None:intergenic 45.0%
GTGAAAAACACGCAGTCAAG+AGG + chr2_1:77914794-77914813 None:intergenic 45.0%
ACAGCATGCAAATTGACCTC+AGG - chr2_1:77914965-77914984 Msa0227200:intron 45.0%
TACTGGTGTCCGTGAGAAAA+AGG - chr2_1:77915158-77915177 Msa0227200:intron 45.0%
! TCCTACAGATGGAAGTGCAT+AGG - chr2_1:77915296-77915315 Msa0227200:intron 45.0%
TCCTATGCACTTCCATCTGT+AGG + chr2_1:77915300-77915319 None:intergenic 45.0%
CAACAGCATATGGCACTTGA+AGG - chr2_1:77916399-77916418 Msa0227200:intron 45.0%
! CATATGGCACTTGAAGGTGT+GGG - chr2_1:77916405-77916424 Msa0227200:intron 45.0%
TGGGAAACATGCATGGACAA+TGG - chr2_1:77916424-77916443 Msa0227200:intron 45.0%
!!! TTTTTTGGCTTGAGCTTGGG+TGG - chr2_1:77917021-77917040 Msa0227200:intron 45.0%
! GTTGTGTTGGTCCAAGTCAA+AGG - chr2_1:77917176-77917195 Msa0227200:intron 45.0%
! TGTGTTGGTCCAAGTCAAAG+GGG - chr2_1:77917178-77917197 Msa0227200:intron 45.0%
AAAATCCACCCCCTTTGACT+TGG + chr2_1:77917190-77917209 None:intergenic 45.0%
TCGAGCTCAAAGGATCAACT+AGG + chr2_1:77918123-77918142 None:intergenic 45.0%
! GGGTCAAGTTTGGAGAGTAT+TGG - chr2_1:77919259-77919278 Msa0227200:intron 45.0%
TCAGCTGCGATTTCACTTTG+GGG + chr2_1:77919310-77919329 None:intergenic 45.0%
GTTCAGCTGCGATTTCACTT+TGG + chr2_1:77919312-77919331 None:intergenic 45.0%
! GACGAGTTTAAGTTCCGAAC+TGG - chr2_1:77919380-77919399 Msa0227200:intron 45.0%
TCCTATTGACGTGAGACCAA+CGG + chr2_1:77919456-77919475 None:intergenic 45.0%
!! GGTACTGATCGGTACAGAAT+TGG - chr2_1:77919572-77919591 Msa0227200:intron 45.0%
TGACGTCAAACCAAAGCCAT+TGG + chr2_1:77919642-77919661 None:intergenic 45.0%
GAGAAAAACACAAGAAGGGG+GGG - chr2_1:77920148-77920167 Msa0227200:intron 45.0%
!! TACTGGTTCCTTCCACAATC+CGG - chr2_1:77920321-77920340 Msa0227200:CDS 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG + chr2_1:77920360-77920379 None:intergenic 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG + chr2_1:77920362-77920381 None:intergenic 45.0%
CGCCTGCATATATGTTCCTT+TGG + chr2_1:77920880-77920899 None:intergenic 45.0%
GTGGACACAAAACAGAGTAG+TGG - chr2_1:77920936-77920955 Msa0227200:intron 45.0%
! AAACAGAGTAGTGGAGAACG+TGG - chr2_1:77920945-77920964 Msa0227200:intron 45.0%
TCCAGTTGAGATTCAGCTTC+TGG - chr2_1:77921142-77921161 Msa0227200:CDS 45.0%
ACCAGAAGCTGAATCTCAAC+TGG + chr2_1:77921146-77921165 None:intergenic 45.0%
CTTCTGGACTACTTGTCTTC+AGG - chr2_1:77921257-77921276 Msa0227200:CDS 45.0%
!!! TTTTCATATTTATTTATTTT+TGG - chr2_1:77914472-77914491 Msa0227200:CDS 5.0%
!! AAAAAGTAAATAAATAAATA+AGG - chr2_1:77915397-77915416 Msa0227200:intron 5.0%
!! TTTAATATTTATCAAATTTA+TGG + chr2_1:77916838-77916857 None:intergenic 5.0%
ACAGATACCAGAGAGCCTCT+GGG - chr2_1:77914417-77914436 Msa0227200:intron 50.0%
! AGCCTCTGGGAAAACCCTAT+GGG - chr2_1:77914430-77914449 Msa0227200:intron 50.0%
! ATCCCATAGGGTTTTCCCAG+AGG + chr2_1:77914435-77914454 None:intergenic 50.0%
CCTCATGCTTAGCATCCCAT+AGG + chr2_1:77914448-77914467 None:intergenic 50.0%
CCTATGGGATGCTAAGCATG+AGG - chr2_1:77914445-77914464 Msa0227200:CDS 50.0%
TGGGATGCTAAGCATGAGGT+AGG - chr2_1:77914449-77914468 Msa0227200:CDS 50.0%
TTTCAGGCACTTGAAGGGAG+AGG - chr2_1:77915074-77915093 Msa0227200:intron 50.0%
CAAAGAGCTGATGTCCCTTG+AGG - chr2_1:77915116-77915135 Msa0227200:intron 50.0%
TGCTCAGGGAAAGATCTTGG+AGG - chr2_1:77915565-77915584 Msa0227200:intron 50.0%
GCATATGGCACTTGAAGGTG+TGG - chr2_1:77916404-77916423 Msa0227200:intron 50.0%
! GAAGGTGTGGGAAACATGCA+TGG - chr2_1:77916417-77916436 Msa0227200:intron 50.0%
! GTGTTGGTCCAAGTCAAAGG+GGG - chr2_1:77917179-77917198 Msa0227200:intron 50.0%
CAAGCTAAGGTCGAGCTCAA+AGG + chr2_1:77918133-77918152 None:intergenic 50.0%
CTTTGAGCTCGACCTTAGCT+TGG - chr2_1:77918131-77918150 Msa0227200:intron 50.0%
TTGGGTGTCCATCCAAGCTA+AGG + chr2_1:77918146-77918165 None:intergenic 50.0%
!! AAGAACGCTGCTGCTGATTC+AGG - chr2_1:77918858-77918877 Msa0227200:intron 50.0%
GACTACTTCCGGATTGTGGA+AGG + chr2_1:77920332-77920351 None:intergenic 50.0%
ACTGGACTACTTCCGGATTG+TGG + chr2_1:77920336-77920355 None:intergenic 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG + chr2_1:77920359-77920378 None:intergenic 50.0%
! ACAACGACTCTTTGGTGTGC+TGG + chr2_1:77920775-77920794 None:intergenic 50.0%
ATGCAGGCGAAACCGTATTC+TGG - chr2_1:77920891-77920910 Msa0227200:intron 50.0%
GACAGATACCAGAGAGCCTC+TGG - chr2_1:77914416-77914435 Msa0227200:intron 55.0%
! GAGCCTCTGGGAAAACCCTA+TGG - chr2_1:77914429-77914448 Msa0227200:intron 55.0%
TTGGTCCAAGTCAAAGGGGG+TGG - chr2_1:77917182-77917201 Msa0227200:intron 55.0%
! GAGCTCGACCTTAGCTTGGA+TGG - chr2_1:77918135-77918154 Msa0227200:intron 55.0%
! GCCGTTGGTCTCACGTCAAT+AGG - chr2_1:77919452-77919471 Msa0227200:intron 55.0%
AAGGGGGACTGGACTACTTC+CGG + chr2_1:77920343-77920362 None:intergenic 55.0%
! GGGTTTTCCCAGAGGCTCTC+TGG + chr2_1:77914427-77914446 None:intergenic 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG + chr2_1:77920354-77920373 None:intergenic 60.0%
CAGTCCCCCTTGCACTTCCA+AGG - chr2_1:77920352-77920371 Msa0227200:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 77914114 77921309 77914114 ID=Msa0227200;Name=Msa0227200
chr2_1 mRNA 77914114 77921309 77914114 ID=Msa0227200-mRNA-1;Parent=Msa0227200;Name=Msa0227200-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.5|1|1|10|0|300
chr2_1 exon 77921122 77921309 77921122 ID=Msa0227200-mRNA-1:exon:23759;Parent=Msa0227200-mRNA-1
chr2_1 exon 77920957 77921023 77920957 ID=Msa0227200-mRNA-1:exon:23758;Parent=Msa0227200-mRNA-1
chr2_1 exon 77920437 77920498 77920437 ID=Msa0227200-mRNA-1:exon:23757;Parent=Msa0227200-mRNA-1
chr2_1 exon 77920244 77920343 77920244 ID=Msa0227200-mRNA-1:exon:23756;Parent=Msa0227200-mRNA-1
chr2_1 exon 77920090 77920119 77920090 ID=Msa0227200-mRNA-1:exon:23755;Parent=Msa0227200-mRNA-1
chr2_1 exon 77919797 77919851 77919797 ID=Msa0227200-mRNA-1:exon:23754;Parent=Msa0227200-mRNA-1
chr2_1 exon 77916531 77916630 77916531 ID=Msa0227200-mRNA-1:exon:23753;Parent=Msa0227200-mRNA-1
chr2_1 exon 77916296 77916332 77916296 ID=Msa0227200-mRNA-1:exon:23752;Parent=Msa0227200-mRNA-1
chr2_1 exon 77914445 77914571 77914445 ID=Msa0227200-mRNA-1:exon:23751;Parent=Msa0227200-mRNA-1
chr2_1 exon 77914114 77914250 77914114 ID=Msa0227200-mRNA-1:exon:23750;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77921122 77921309 77921122 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77920957 77921023 77920957 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77920437 77920498 77920437 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77920244 77920343 77920244 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77920090 77920119 77920090 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77919797 77919851 77919797 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77916531 77916630 77916531 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77916296 77916332 77916296 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77914445 77914571 77914445 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
chr2_1 CDS 77914114 77914250 77914114 ID=Msa0227200-mRNA-1:cds;Parent=Msa0227200-mRNA-1
Gene Sequence

>Msa0227200

ATGGGAAGGGGTAAGATTGAGATCAAGAGGATTGAAAACTCAAGCAACAGGCAAGTTACTTATTCAAAGAGAAAGAATGGAATCCTTAAGAAAGCAAAGGAAATAAGTGTTCTTTGTGATGCTCAAGTTTCCCTTATTCTCTTTGGTGCTTCTGGTAAGATGCATGAATACATCAGCCCTTCCACCACGTTGATTGATATTCTGGACAGATACCAGAGAGCCTCTGGGAAAACCCTATGGGATGCTAAGCATGAGAACCTTAGCAATGAAATTGATAGAATCAAAAAGGAGAATGACAGCATGCAAATTGACCTCAGGCACTTGAAGGGAGAGGACATTACCTCACTGAATTACAAAGAGCTGATGTCCCTTGAGGAATCCCTTGAAAATGGTCTTACTGGTGTCCGTGAGAAAAAGATGGAAGTGCATAGGATGTTCAAGAGAAATGGAAAGATCTTGGAGGATGAAAATAAGGAACTCAATTTTCTTCTGGTAAGTGGTGAGGAGAACAAGAAAGACGAGAAGAGAAGAGAAAAGTCAAGAGAAGAGGAGAATACATTAGGAAAGAAGAACGCTGCTGCTGATTCAGGAATTAATCTAAGTTTTGAGGTTAGAACCATGGAATTGGATGAGATGTTGAACCAATTTGAAATCCATTCCTTATCCAAAGGAACATATATGCAGGCGAAACCGTATTCTGGAGCTGTTTTCTTGTCTTGTAGCGTGGACACAAAACAGAGTAGTGGAGAACGTGGTTGTACAATTCCTTCTGATGAGGCAGCTTCTGATGATGCAGCTTCTGATGATATGACTTCTGCAGCTTCTGATGATGCAGCTTCTGATGATATGACTTCTGGACTACTTGTCTTCAGGAGCACTATTCTTACTTCAGAAGCGTCTTAA
Protein sequence

>Msa0227200

MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLILFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRIKKENDSMQIDLRHLKGEDITSLNYKELMSLEESLENGLTGVREKKMEVHRMFKRNGKILEDENKELNFLLVSGEENKKDEKRREKSREEENTLGKKNAAADSGINLSFEVRTMELDEMLNQFEIHSLSKGTYMQAKPYSGAVFLSCSVDTKQSSGERGCTIPSDEAASDDAASDDMTSAASDDAASDDMTSGLLVFRSTILTSEAS*