AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0233090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233090 MtrunA17_Chr2g0280431 89.647 425 34 4 1 421 1 419 0.0 665
Msa0233090 MtrunA17_Chr4g0061741 54.430 158 65 4 235 390 114 266 1.07e-39 143
Msa0233090 MtrunA17_Chr3g0113131 35.793 271 142 8 155 407 106 362 7.41e-33 127
Msa0233090 MtrunA17_Chr7g0273821 30.921 152 83 4 153 293 68 208 1.12e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233090 AT1G61730.1 32.333 433 208 16 9 419 3 372 4.74e-28 114
Msa0233090 AT4G00390.1 31.034 406 212 14 16 409 6 355 3.94e-22 97.4
Msa0233090 AT1G11510.1 30.295 373 188 15 59 407 15 339 3.25e-20 91.7
Msa0233090 AT1G11510.2 29.477 363 175 13 59 407 15 310 6.41e-18 84.7
Msa0233090 AT4G25210.1 26.567 335 182 11 111 414 63 364 1.12e-16 81.6
Msa0233090 AT1G66420.1 36.090 133 69 4 161 289 53 173 2.51e-14 73.6
Msa0233090 AT2G01370.1 31.214 173 95 5 130 288 7 169 2.00e-13 70.5
Msa0233090 AT1G44810.1 26.923 286 126 9 8 289 3 209 2.17e-13 70.9
Msa0233090 AT4G01260.1 29.433 282 146 9 158 411 57 313 3.56e-12 67.4
Msa0233090 AT2G25650.1 35.714 140 72 6 208 336 67 199 1.91e-11 65.9
Msa0233090 AT5G14280.1 28.936 235 134 8 208 412 63 294 9.20e-11 63.2

Find 114 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGGCTTGGGCTTGGACT+TGG 0.123490 2_2:-5424819 None:intergenic
CTTGGGCTTGGACTTGGGTT+TGG 0.137721 2_2:-5424813 None:intergenic
GAAGCAAGTGGTTTAACTTT+AGG 0.199493 2_2:-5424775 None:intergenic
ATTGGGCTTGGGCTTGGGCT+TGG 0.201008 2_2:-5424825 None:intergenic
TTGGGCTTGGACTTGGGTTT+GGG 0.211588 2_2:-5424812 None:intergenic
GATTCAGATTCAGCGGGTTT+AGG 0.217235 2_2:-5424670 None:intergenic
AAGCAAGTGGTTTAACTTTA+GGG 0.240022 2_2:-5424774 None:intergenic
CAAGAAGAAATCAAGCAAAT+AGG 0.257807 2_2:+5425644 Msa0233090:CDS
GAGTTGATTGGGCTTGGGCT+TGG 0.262442 2_2:-5424831 None:intergenic
TTGGGCTTGGGCTTGGACTT+GGG 0.274782 2_2:-5424818 None:intergenic
GCACCGGAGTTGATTGGGCT+TGG 0.275880 2_2:-5424837 None:intergenic
AGTTGATTGGGCTTGGGCTT+GGG 0.282116 2_2:-5424830 None:intergenic
ATTCAGATTCAGCGGGTTTA+GGG 0.293343 2_2:-5424669 None:intergenic
TGAATCGCGCTGAGGTGGTT+AGG 0.312947 2_2:+5425592 Msa0233090:CDS
CACCGGAGTTGATTGGGCTT+GGG 0.331565 2_2:-5424836 None:intergenic
TTCTTCGTTGACTACTTTGT+CGG 0.338007 2_2:-5424500 None:intergenic
GTGGGTTCCGATTTCTGTTC+CGG 0.351302 2_2:-5424739 None:intergenic
TTGTGATTCTCAAAGGGCTT+GGG 0.351413 2_2:+5425043 Msa0233090:CDS
GGCACGCTTAGTTCCGGACT+TGG 0.351838 2_2:-5424863 None:intergenic
GTCAGATAGGGTTGAGTTGG+AGG 0.367989 2_2:+5425527 Msa0233090:CDS
TGCTCTCTTATCATGAGCTT+TGG 0.370081 2_2:-5425220 None:intergenic
GCAGACTAGATTGGCATTGC+AGG 0.370825 2_2:+5425617 Msa0233090:CDS
TCAGAATCCGGTTCTGAATC+TGG 0.376206 2_2:+5424697 Msa0233090:CDS
AAGAAGAAATCAAGCAAATA+GGG 0.379593 2_2:+5425645 Msa0233090:CDS
AGTGGTTTAACTTTAGGGTT+AGG 0.384389 2_2:-5424769 None:intergenic
TTCGGCGGCACGCTTAGTTC+CGG 0.394238 2_2:-5424869 None:intergenic
TGGTTGGCACCGGAGTTGAT+TGG 0.408980 2_2:-5424843 None:intergenic
TTCTGAACCGGAACAGAAAT+CGG 0.410111 2_2:+5424732 Msa0233090:CDS
GCGGGTTTAGGGGTAGAGAT+AGG 0.413172 2_2:-5424658 None:intergenic
CTTGTGATTCTCAAAGGGCT+TGG 0.413788 2_2:+5425042 Msa0233090:CDS
GGTTGGCACCGGAGTTGATT+GGG 0.414661 2_2:-5424842 None:intergenic
TCTCTTCAATTGCTGAGCAT+TGG 0.418880 2_2:-5425151 None:intergenic
GAATCGCGCTGAGGTGGTTA+GGG 0.419146 2_2:+5425593 Msa0233090:CDS
CTCGTCGGAGGAAGAGGCGG+TGG 0.434145 2_2:-5424449 None:intergenic
GGGGTAGAGATAGGAGTAGA+AGG 0.435130 2_2:-5424649 None:intergenic
TCTGAATCCGGCTCAGAATC+CGG 0.447335 2_2:+5424685 Msa0233090:CDS
ATCGTTTCCAGTGTTACTTT+CGG 0.449680 2_2:-5424887 None:intergenic
CGCTTAGTTCCGGACTTGGT+TGG 0.450754 2_2:-5424859 None:intergenic
TCGGAGGAAGAGGCGGTGGG+TGG 0.451878 2_2:-5424445 None:intergenic
TAAGAATGAAAGTGGAAAAG+TGG 0.453012 2_2:+5425389 Msa0233090:CDS
TTCGGTTCCAGATTCAGAAC+CGG 0.454128 2_2:-5424704 None:intergenic
AACCGAATCTGATTCTGAAC+CGG 0.455116 2_2:+5424720 Msa0233090:CDS
TCCATCTCCTTCTTCTTCTG+AGG 0.458431 2_2:-5424536 None:intergenic
GGAGAGGTGGAAGAAGTTGC+AGG 0.459564 2_2:+5425548 Msa0233090:CDS
GGTTTAACTTTAGGGTTAGG+AGG 0.459566 2_2:-5424766 None:intergenic
TTCCGGTTCAGAATCAGATT+CGG 0.461387 2_2:-5424722 None:intergenic
AAGGAAGCAGCTGCATTTCA+CGG 0.465241 2_2:+5425099 Msa0233090:CDS
AATCACAAAGAGTGCTAAGA+AGG 0.466107 2_2:+5425314 Msa0233090:CDS
TTGATCCTCGTCGGAGGAAG+AGG 0.466920 2_2:-5424455 None:intergenic
ACTCCGGTGCCAACCAAGTC+CGG 0.469333 2_2:+5424850 Msa0233090:CDS
ATAGTTACTAAGAATGAAAG+TGG 0.473928 2_2:+5425381 Msa0233090:CDS
GGAGTCAGATAGGGTTGAGT+TGG 0.474759 2_2:+5425524 Msa0233090:CDS
TGTGATTCTCAAAGGGCTTG+GGG 0.482044 2_2:+5425044 Msa0233090:CDS
GTTCCGGACTTGGTTGGCAC+CGG 0.486396 2_2:-5424853 None:intergenic
TTAACTTTAGGGTTAGGAGG+AGG 0.489961 2_2:-5424763 None:intergenic
GGGTATAGCTGTGCTGGATA+AGG 0.490129 2_2:+5425470 Msa0233090:CDS
GGGTTGAGTTGGAGGAGAGG+TGG 0.490174 2_2:+5425535 Msa0233090:CDS
GAGATAGGAGTAGAAGGAGG+AGG 0.494629 2_2:-5424643 None:intergenic
TTCAGAACCGGATTCTGAGC+CGG 0.501712 2_2:-5424692 None:intergenic
ACGAGCTTGTGATTCTCAAA+GGG 0.508640 2_2:+5425037 Msa0233090:CDS
TCTAAGGAAGCTGAAGAAAA+CGG 0.508657 2_2:+5425276 Msa0233090:CDS
AAGAAAACCACCGGTGGTGG+TGG 0.509946 2_2:+5424925 Msa0233090:CDS
AAATGGTGGTTCTGCTAGGA+AGG 0.513798 2_2:+5425350 Msa0233090:CDS
AAGAAGAAAACCACCGGTGG+TGG 0.515031 2_2:+5424922 Msa0233090:CDS
GAAGTTGCAGGCTGCCGAGA+TGG 0.515486 2_2:+5425560 Msa0233090:CDS
ATAGGGTTGAGTTGGAGGAG+AGG 0.516403 2_2:+5425532 Msa0233090:CDS
GGTTAGGGAGCAGACTAGAT+TGG 0.517395 2_2:+5425608 Msa0233090:CDS
AGATAGGAGTAGAAGGAGGA+GGG 0.520024 2_2:-5424642 None:intergenic
GAAGGAGATGGAGAAGAAGA+AGG 0.521213 2_2:+5424547 Msa0233090:CDS
GACGAGCTTGTGATTCTCAA+AGG 0.523580 2_2:+5425036 Msa0233090:CDS
AAACCCGCTGAATCTGAATC+CGG 0.523805 2_2:+5424673 Msa0233090:CDS
CGGAGGAAGAGGCGGTGGGT+GGG 0.524036 2_2:-5424444 None:intergenic
TCGTTGACTACTTTGTCGGC+TGG 0.525334 2_2:-5424496 None:intergenic
GTTAAATTTGATGAGGCTGC+GGG 0.528643 2_2:+5425450 Msa0233090:CDS
TGCTCAGCAATTGAAGAGAA+AGG 0.529680 2_2:+5425155 Msa0233090:CDS
GGCTGCGGGTATAGCTGTGC+TGG 0.534970 2_2:+5425464 Msa0233090:CDS
GGTTAAATTTGATGAGGCTG+CGG 0.538193 2_2:+5425449 Msa0233090:CDS
ATCATCAGAACCACCACCAC+CGG 0.552134 2_2:-5424935 None:intergenic
CAATTGAAGAGAAAGGTTCG+TGG 0.552666 2_2:+5425162 Msa0233090:CDS
TGATGAGAATGAGGCGGAGG+AGG 0.559810 2_2:+5424954 Msa0233090:CDS
GATTCATCCTCAGAAGAAGA+AGG 0.562296 2_2:+5424529 Msa0233090:CDS
AATGCAGCTGCTTCCTTCAG+CGG 0.564243 2_2:-5425093 None:intergenic
TTAGGGTTAGGAGGAGGAGT+GGG 0.566966 2_2:-5424757 None:intergenic
GAGCCGGATTCAGATTCAGC+GGG 0.569467 2_2:-5424676 None:intergenic
TGATGATGAGAATGAGGCGG+AGG 0.577141 2_2:+5424951 Msa0233090:CDS
TCCTCAGAAGAAGAAGGAGA+TGG 0.578512 2_2:+5424535 Msa0233090:CDS
AAAAGCGGTTTGGAATTGAT+GGG 0.579284 2_2:+5425501 Msa0233090:CDS
TTCATGGGCTTTGAAGCAAG+TGG 0.579960 2_2:-5424787 None:intergenic
GAGGAGGATGTGAAATTGAC+TGG 0.583042 2_2:+5424970 Msa0233090:CDS
TCGTCGGAGGAAGAGGCGGT+GGG 0.588753 2_2:-5424448 None:intergenic
TGAAGGTGGTTGATCCTCGT+CGG 0.589745 2_2:-5424464 None:intergenic
GAAAGTGGAAAAGTGGAAAG+TGG 0.593025 2_2:+5425396 Msa0233090:CDS
AGCCCAAGCCCAATCAACTC+CGG 0.593390 2_2:+5424834 Msa0233090:CDS
TTTAGGGTTAGGAGGAGGAG+TGG 0.598971 2_2:-5424758 None:intergenic
ATCCTCGTCGGAGGAAGAGG+CGG 0.601599 2_2:-5424452 None:intergenic
CGTGCCGCCGAAAGTAACAC+TGG 0.604597 2_2:+5424880 Msa0233090:CDS
CACCGCCTCTTCCTCCGACG+AGG 0.604984 2_2:+5424450 Msa0233090:CDS
GGAAAAGTGGAAAGTGGTGT+TGG 0.606211 2_2:+5425402 Msa0233090:CDS
AAAGCGGTTTGGAATTGATG+GGG 0.609458 2_2:+5425502 Msa0233090:CDS
GACTGGAAAGGATCCGCTGA+AGG 0.611489 2_2:+5425080 Msa0233090:CDS
GTGGGTCGTCGACGAGAGCG+AGG 0.630460 2_2:-5424426 None:intergenic
TGGTTCTGATGATGAGAATG+AGG 0.631876 2_2:+5424945 Msa0233090:CDS
CGTTCCAAGAAGAAAACCAC+CGG 0.642479 2_2:+5424916 Msa0233090:CDS
GTTTCCAGTGTTACTTTCGG+CGG 0.643844 2_2:-5424884 None:intergenic
TGAGCCGGATTCAGATTCAG+CGG 0.650032 2_2:-5424677 None:intergenic
TTCAGATTCAGCGGGTTTAG+GGG 0.652803 2_2:-5424668 None:intergenic
GTAGAGATAGGAGTAGAAGG+AGG 0.653610 2_2:-5424646 None:intergenic
CGAACTGGTTAAATTTGATG+AGG 0.653994 2_2:+5425443 Msa0233090:CDS
ATCAGAACCACCACCACCGG+TGG 0.666036 2_2:-5424932 None:intergenic
AGGTGGTTGATCCTCGTCGG+AGG 0.667833 2_2:-5424461 None:intergenic
AAGCGGTTTGGAATTGATGG+GGG 0.669970 2_2:+5425503 Msa0233090:CDS
GAAGAAATCGATGAAAGCTG+AGG 0.677405 2_2:+5425128 Msa0233090:CDS
TCCAAGAAGAAAACCACCGG+TGG 0.717568 2_2:+5424919 Msa0233090:CDS
TTCTGATGATGAGAATGAGG+CGG 0.722855 2_2:+5424948 Msa0233090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATAGTTACTAAGAATGAAAG+TGG + chr2_2:5425381-5425400 Msa0233090:CDS 25.0%
! ATAGTTACTAAGAATGAAAG+TGG + chr2_2:5425381-5425400 Msa0233090:CDS 25.0%
! AAGCAAGTGGTTTAACTTTA+GGG - chr2_2:5424777-5424796 None:intergenic 30.0%
!! CATTTGATCTTTTCAAGGTT+TGG + chr2_2:5425241-5425260 Msa0233090:CDS 30.0%
TAAGAATGAAAGTGGAAAAG+TGG + chr2_2:5425389-5425408 Msa0233090:CDS 30.0%
ATTCAAAAACACTTCCATCT+CGG - chr2_2:5425577-5425596 None:intergenic 30.0%
! AAGCAAGTGGTTTAACTTTA+GGG - chr2_2:5424777-5424796 None:intergenic 30.0%
!! CATTTGATCTTTTCAAGGTT+TGG + chr2_2:5425241-5425260 Msa0233090:CDS 30.0%
TAAGAATGAAAGTGGAAAAG+TGG + chr2_2:5425389-5425408 Msa0233090:CDS 30.0%
ATTCAAAAACACTTCCATCT+CGG - chr2_2:5425577-5425596 None:intergenic 30.0%
! TTCTTCGTTGACTACTTTGT+CGG - chr2_2:5424503-5424522 None:intergenic 35.0%
!! AGTGGTTTAACTTTAGGGTT+AGG - chr2_2:5424772-5424791 None:intergenic 35.0%
! GAAGCAAGTGGTTTAACTTT+AGG - chr2_2:5424778-5424797 None:intergenic 35.0%
!! ATCGTTTCCAGTGTTACTTT+CGG - chr2_2:5424890-5424909 None:intergenic 35.0%
!!! GAGAGCATTTGATCTTTTCA+AGG + chr2_2:5425236-5425255 Msa0233090:CDS 35.0%
TTGGAGCAAAAATGCTTCTA+AGG + chr2_2:5425260-5425279 Msa0233090:CDS 35.0%
TCTAAGGAAGCTGAAGAAAA+CGG + chr2_2:5425276-5425295 Msa0233090:CDS 35.0%
!! AATCACAAAGAGTGCTAAGA+AGG + chr2_2:5425314-5425333 Msa0233090:CDS 35.0%
AAGGAAGCTCCTGTTAAAAA+TGG + chr2_2:5425333-5425352 Msa0233090:CDS 35.0%
! TTAAAAATGGTGGTTCTGCT+AGG + chr2_2:5425346-5425365 Msa0233090:CDS 35.0%
CGAACTGGTTAAATTTGATG+AGG + chr2_2:5425443-5425462 Msa0233090:CDS 35.0%
GATAAGGATGCTACAAAAAG+CGG + chr2_2:5425486-5425505 Msa0233090:CDS 35.0%
! AAAAAGCGGTTTGGAATTGA+TGG + chr2_2:5425500-5425519 Msa0233090:CDS 35.0%
! AAAAGCGGTTTGGAATTGAT+GGG + chr2_2:5425501-5425520 Msa0233090:CDS 35.0%
! TTCTTCGTTGACTACTTTGT+CGG - chr2_2:5424503-5424522 None:intergenic 35.0%
!! AGTGGTTTAACTTTAGGGTT+AGG - chr2_2:5424772-5424791 None:intergenic 35.0%
! GAAGCAAGTGGTTTAACTTT+AGG - chr2_2:5424778-5424797 None:intergenic 35.0%
!! ATCGTTTCCAGTGTTACTTT+CGG - chr2_2:5424890-5424909 None:intergenic 35.0%
!!! GAGAGCATTTGATCTTTTCA+AGG + chr2_2:5425236-5425255 Msa0233090:CDS 35.0%
TTGGAGCAAAAATGCTTCTA+AGG + chr2_2:5425260-5425279 Msa0233090:CDS 35.0%
TCTAAGGAAGCTGAAGAAAA+CGG + chr2_2:5425276-5425295 Msa0233090:CDS 35.0%
!! AATCACAAAGAGTGCTAAGA+AGG + chr2_2:5425314-5425333 Msa0233090:CDS 35.0%
AAGGAAGCTCCTGTTAAAAA+TGG + chr2_2:5425333-5425352 Msa0233090:CDS 35.0%
! TTAAAAATGGTGGTTCTGCT+AGG + chr2_2:5425346-5425365 Msa0233090:CDS 35.0%
CGAACTGGTTAAATTTGATG+AGG + chr2_2:5425443-5425462 Msa0233090:CDS 35.0%
GATAAGGATGCTACAAAAAG+CGG + chr2_2:5425486-5425505 Msa0233090:CDS 35.0%
! AAAAAGCGGTTTGGAATTGA+TGG + chr2_2:5425500-5425519 Msa0233090:CDS 35.0%
! AAAAGCGGTTTGGAATTGAT+GGG + chr2_2:5425501-5425520 Msa0233090:CDS 35.0%
!! CGTTTCTTTTGCTTTGGCTT+TGG - chr2_2:5424406-5424425 None:intergenic 40.0%
!!! TACTTTGTCGGCTGGTTTTT+GGG - chr2_2:5424491-5424510 None:intergenic 40.0%
GATTCATCCTCAGAAGAAGA+AGG + chr2_2:5424529-5424548 Msa0233090:CDS 40.0%
! ATTCAGATTCAGCGGGTTTA+GGG - chr2_2:5424672-5424691 None:intergenic 40.0%
AACCGAATCTGATTCTGAAC+CGG + chr2_2:5424720-5424739 Msa0233090:CDS 40.0%
TTCCGGTTCAGAATCAGATT+CGG - chr2_2:5424725-5424744 None:intergenic 40.0%
TTCTGAACCGGAACAGAAAT+CGG + chr2_2:5424732-5424751 Msa0233090:CDS 40.0%
!! TTAACTTTAGGGTTAGGAGG+AGG - chr2_2:5424766-5424785 None:intergenic 40.0%
!! GGTTTAACTTTAGGGTTAGG+AGG - chr2_2:5424769-5424788 None:intergenic 40.0%
!! ACTTGGGTTTGGGTTTTCAT+GGG - chr2_2:5424805-5424824 None:intergenic 40.0%
!! TGGTTCTGATGATGAGAATG+AGG + chr2_2:5424945-5424964 Msa0233090:CDS 40.0%
! TTCTGATGATGAGAATGAGG+CGG + chr2_2:5424948-5424967 Msa0233090:CDS 40.0%
ACGAGCTTGTGATTCTCAAA+GGG + chr2_2:5425037-5425056 Msa0233090:CDS 40.0%
TTGTGATTCTCAAAGGGCTT+GGG + chr2_2:5425043-5425062 Msa0233090:CDS 40.0%
GAAGAAATCGATGAAAGCTG+AGG + chr2_2:5425128-5425147 Msa0233090:CDS 40.0%
TCTCTTCAATTGCTGAGCAT+TGG - chr2_2:5425154-5425173 None:intergenic 40.0%
TGCTCAGCAATTGAAGAGAA+AGG + chr2_2:5425155-5425174 Msa0233090:CDS 40.0%
CAATTGAAGAGAAAGGTTCG+TGG + chr2_2:5425162-5425181 Msa0233090:CDS 40.0%
TGCTCTCTTATCATGAGCTT+TGG - chr2_2:5425223-5425242 None:intergenic 40.0%
GAAGCTCCTGTTAAAAATGG+TGG + chr2_2:5425336-5425355 Msa0233090:CDS 40.0%
!! GCAGAACCACCATTTTTAAC+AGG - chr2_2:5425345-5425364 None:intergenic 40.0%
GAAAGTGGAAAAGTGGAAAG+TGG + chr2_2:5425396-5425415 Msa0233090:CDS 40.0%
! GAGTTTCATTTTGAGCGAAC+TGG + chr2_2:5425428-5425447 Msa0233090:CDS 40.0%
GGTTAAATTTGATGAGGCTG+CGG + chr2_2:5425449-5425468 Msa0233090:CDS 40.0%
GTTAAATTTGATGAGGCTGC+GGG + chr2_2:5425450-5425469 Msa0233090:CDS 40.0%
! AAAGCGGTTTGGAATTGATG+GGG + chr2_2:5425502-5425521 Msa0233090:CDS 40.0%
!! CGTTTCTTTTGCTTTGGCTT+TGG - chr2_2:5424406-5424425 None:intergenic 40.0%
!!! TACTTTGTCGGCTGGTTTTT+GGG - chr2_2:5424491-5424510 None:intergenic 40.0%
GATTCATCCTCAGAAGAAGA+AGG + chr2_2:5424529-5424548 Msa0233090:CDS 40.0%
! ATTCAGATTCAGCGGGTTTA+GGG - chr2_2:5424672-5424691 None:intergenic 40.0%
AACCGAATCTGATTCTGAAC+CGG + chr2_2:5424720-5424739 Msa0233090:CDS 40.0%
TTCCGGTTCAGAATCAGATT+CGG - chr2_2:5424725-5424744 None:intergenic 40.0%
TTCTGAACCGGAACAGAAAT+CGG + chr2_2:5424732-5424751 Msa0233090:CDS 40.0%
!! TTAACTTTAGGGTTAGGAGG+AGG - chr2_2:5424766-5424785 None:intergenic 40.0%
!! GGTTTAACTTTAGGGTTAGG+AGG - chr2_2:5424769-5424788 None:intergenic 40.0%
!! ACTTGGGTTTGGGTTTTCAT+GGG - chr2_2:5424805-5424824 None:intergenic 40.0%
!! TGGTTCTGATGATGAGAATG+AGG + chr2_2:5424945-5424964 Msa0233090:CDS 40.0%
! TTCTGATGATGAGAATGAGG+CGG + chr2_2:5424948-5424967 Msa0233090:CDS 40.0%
ACGAGCTTGTGATTCTCAAA+GGG + chr2_2:5425037-5425056 Msa0233090:CDS 40.0%
TTGTGATTCTCAAAGGGCTT+GGG + chr2_2:5425043-5425062 Msa0233090:CDS 40.0%
GAAGAAATCGATGAAAGCTG+AGG + chr2_2:5425128-5425147 Msa0233090:CDS 40.0%
TCTCTTCAATTGCTGAGCAT+TGG - chr2_2:5425154-5425173 None:intergenic 40.0%
TGCTCAGCAATTGAAGAGAA+AGG + chr2_2:5425155-5425174 Msa0233090:CDS 40.0%
CAATTGAAGAGAAAGGTTCG+TGG + chr2_2:5425162-5425181 Msa0233090:CDS 40.0%
TGCTCTCTTATCATGAGCTT+TGG - chr2_2:5425223-5425242 None:intergenic 40.0%
GAAGCTCCTGTTAAAAATGG+TGG + chr2_2:5425336-5425355 Msa0233090:CDS 40.0%
!! GCAGAACCACCATTTTTAAC+AGG - chr2_2:5425345-5425364 None:intergenic 40.0%
GAAAGTGGAAAAGTGGAAAG+TGG + chr2_2:5425396-5425415 Msa0233090:CDS 40.0%
! GAGTTTCATTTTGAGCGAAC+TGG + chr2_2:5425428-5425447 Msa0233090:CDS 40.0%
GGTTAAATTTGATGAGGCTG+CGG + chr2_2:5425449-5425468 Msa0233090:CDS 40.0%
GTTAAATTTGATGAGGCTGC+GGG + chr2_2:5425450-5425469 Msa0233090:CDS 40.0%
! AAAGCGGTTTGGAATTGATG+GGG + chr2_2:5425502-5425521 Msa0233090:CDS 40.0%
!!! CTACTTTGTCGGCTGGTTTT+TGG - chr2_2:5424492-5424511 None:intergenic 45.0%
TCCTCAGAAGAAGAAGGAGA+TGG + chr2_2:5424535-5424554 Msa0233090:CDS 45.0%
TCCATCTCCTTCTTCTTCTG+AGG - chr2_2:5424539-5424558 None:intergenic 45.0%
GAAGGAGATGGAGAAGAAGA+AGG + chr2_2:5424547-5424566 Msa0233090:CDS 45.0%
!!! GCGGGTTTTGAATCTTTCGA+AGG - chr2_2:5424613-5424632 None:intergenic 45.0%
! AGTAGAAGGAGGAGGGTTTT+TGG - chr2_2:5424638-5424657 None:intergenic 45.0%
AGATAGGAGTAGAAGGAGGA+GGG - chr2_2:5424645-5424664 None:intergenic 45.0%
GTAGAGATAGGAGTAGAAGG+AGG - chr2_2:5424649-5424668 None:intergenic 45.0%
! TTCAGATTCAGCGGGTTTAG+GGG - chr2_2:5424671-5424690 None:intergenic 45.0%
! GATTCAGATTCAGCGGGTTT+AGG - chr2_2:5424673-5424692 None:intergenic 45.0%
AAACCCGCTGAATCTGAATC+CGG + chr2_2:5424673-5424692 Msa0233090:CDS 45.0%
!! TCAGAATCCGGTTCTGAATC+TGG + chr2_2:5424697-5424716 Msa0233090:CDS 45.0%
TTCGGTTCCAGATTCAGAAC+CGG - chr2_2:5424707-5424726 None:intergenic 45.0%
!! TTCATGGGCTTTGAAGCAAG+TGG - chr2_2:5424790-5424809 None:intergenic 45.0%
!! GACTTGGGTTTGGGTTTTCA+TGG - chr2_2:5424806-5424825 None:intergenic 45.0%
!! GTTTCCAGTGTTACTTTCGG+CGG - chr2_2:5424887-5424906 None:intergenic 45.0%
CGTTCCAAGAAGAAAACCAC+CGG + chr2_2:5424916-5424935 Msa0233090:CDS 45.0%
GAGGAGGATGTGAAATTGAC+TGG + chr2_2:5424970-5424989 Msa0233090:CDS 45.0%
GACGAGCTTGTGATTCTCAA+AGG + chr2_2:5425036-5425055 Msa0233090:CDS 45.0%
CTTGTGATTCTCAAAGGGCT+TGG + chr2_2:5425042-5425061 Msa0233090:CDS 45.0%
TGTGATTCTCAAAGGGCTTG+GGG + chr2_2:5425044-5425063 Msa0233090:CDS 45.0%
! TTTTGTGGCGAAGACTGGAA+AGG + chr2_2:5425068-5425087 Msa0233090:CDS 45.0%
AAGGAAGCAGCTGCATTTCA+CGG + chr2_2:5425099-5425118 Msa0233090:CDS 45.0%
! AAATGGTGGTTCTGCTAGGA+AGG + chr2_2:5425350-5425369 Msa0233090:CDS 45.0%
GGAAAAGTGGAAAGTGGTGT+TGG + chr2_2:5425402-5425421 Msa0233090:CDS 45.0%
GGATGCTACAAAAAGCGGTT+TGG + chr2_2:5425491-5425510 Msa0233090:CDS 45.0%
! AAGCGGTTTGGAATTGATGG+GGG + chr2_2:5425503-5425522 Msa0233090:CDS 45.0%
AATTGATGGGGGAGTCAGAT+AGG + chr2_2:5425514-5425533 Msa0233090:CDS 45.0%
ATTGATGGGGGAGTCAGATA+GGG + chr2_2:5425515-5425534 Msa0233090:CDS 45.0%
!! AGTGTTTTTGAATCGCGCTG+AGG + chr2_2:5425584-5425603 Msa0233090:CDS 45.0%
!!! CTACTTTGTCGGCTGGTTTT+TGG - chr2_2:5424492-5424511 None:intergenic 45.0%
TCCTCAGAAGAAGAAGGAGA+TGG + chr2_2:5424535-5424554 Msa0233090:CDS 45.0%
TCCATCTCCTTCTTCTTCTG+AGG - chr2_2:5424539-5424558 None:intergenic 45.0%
GAAGGAGATGGAGAAGAAGA+AGG + chr2_2:5424547-5424566 Msa0233090:CDS 45.0%
!!! GCGGGTTTTGAATCTTTCGA+AGG - chr2_2:5424613-5424632 None:intergenic 45.0%
! AGTAGAAGGAGGAGGGTTTT+TGG - chr2_2:5424638-5424657 None:intergenic 45.0%
AGATAGGAGTAGAAGGAGGA+GGG - chr2_2:5424645-5424664 None:intergenic 45.0%
GTAGAGATAGGAGTAGAAGG+AGG - chr2_2:5424649-5424668 None:intergenic 45.0%
! TTCAGATTCAGCGGGTTTAG+GGG - chr2_2:5424671-5424690 None:intergenic 45.0%
! GATTCAGATTCAGCGGGTTT+AGG - chr2_2:5424673-5424692 None:intergenic 45.0%
AAACCCGCTGAATCTGAATC+CGG + chr2_2:5424673-5424692 Msa0233090:CDS 45.0%
!! TCAGAATCCGGTTCTGAATC+TGG + chr2_2:5424697-5424716 Msa0233090:CDS 45.0%
TTCGGTTCCAGATTCAGAAC+CGG - chr2_2:5424707-5424726 None:intergenic 45.0%
!! TTCATGGGCTTTGAAGCAAG+TGG - chr2_2:5424790-5424809 None:intergenic 45.0%
!! GACTTGGGTTTGGGTTTTCA+TGG - chr2_2:5424806-5424825 None:intergenic 45.0%
!! GTTTCCAGTGTTACTTTCGG+CGG - chr2_2:5424887-5424906 None:intergenic 45.0%
CGTTCCAAGAAGAAAACCAC+CGG + chr2_2:5424916-5424935 Msa0233090:CDS 45.0%
GAGGAGGATGTGAAATTGAC+TGG + chr2_2:5424970-5424989 Msa0233090:CDS 45.0%
GACGAGCTTGTGATTCTCAA+AGG + chr2_2:5425036-5425055 Msa0233090:CDS 45.0%
CTTGTGATTCTCAAAGGGCT+TGG + chr2_2:5425042-5425061 Msa0233090:CDS 45.0%
TGTGATTCTCAAAGGGCTTG+GGG + chr2_2:5425044-5425063 Msa0233090:CDS 45.0%
! TTTTGTGGCGAAGACTGGAA+AGG + chr2_2:5425068-5425087 Msa0233090:CDS 45.0%
AAGGAAGCAGCTGCATTTCA+CGG + chr2_2:5425099-5425118 Msa0233090:CDS 45.0%
! AAATGGTGGTTCTGCTAGGA+AGG + chr2_2:5425350-5425369 Msa0233090:CDS 45.0%
GGAAAAGTGGAAAGTGGTGT+TGG + chr2_2:5425402-5425421 Msa0233090:CDS 45.0%
GGATGCTACAAAAAGCGGTT+TGG + chr2_2:5425491-5425510 Msa0233090:CDS 45.0%
! AAGCGGTTTGGAATTGATGG+GGG + chr2_2:5425503-5425522 Msa0233090:CDS 45.0%
AATTGATGGGGGAGTCAGAT+AGG + chr2_2:5425514-5425533 Msa0233090:CDS 45.0%
ATTGATGGGGGAGTCAGATA+GGG + chr2_2:5425515-5425534 Msa0233090:CDS 45.0%
!! AGTGTTTTTGAATCGCGCTG+AGG + chr2_2:5425584-5425603 Msa0233090:CDS 45.0%
!! GCGAGGCGTTTCTTTTGCTT+TGG - chr2_2:5424412-5424431 None:intergenic 50.0%
TGAAGGTGGTTGATCCTCGT+CGG - chr2_2:5424467-5424486 None:intergenic 50.0%
!!! GCTGGTTTTTGGGTTGAAGG+TGG - chr2_2:5424481-5424500 None:intergenic 50.0%
!!! TCGGCTGGTTTTTGGGTTGA+AGG - chr2_2:5424484-5424503 None:intergenic 50.0%
! TCGTTGACTACTTTGTCGGC+TGG - chr2_2:5424499-5424518 None:intergenic 50.0%
!! AGGAGGAGGGTTTTTGGAAG+CGG - chr2_2:5424632-5424651 None:intergenic 50.0%
GAGATAGGAGTAGAAGGAGG+AGG - chr2_2:5424646-5424665 None:intergenic 50.0%
GGGGTAGAGATAGGAGTAGA+AGG - chr2_2:5424652-5424671 None:intergenic 50.0%
TGAGCCGGATTCAGATTCAG+CGG - chr2_2:5424680-5424699 None:intergenic 50.0%
TCTGAATCCGGCTCAGAATC+CGG + chr2_2:5424685-5424704 Msa0233090:CDS 50.0%
TTCAGAACCGGATTCTGAGC+CGG - chr2_2:5424695-5424714 None:intergenic 50.0%
GTGGGTTCCGATTTCTGTTC+CGG - chr2_2:5424742-5424761 None:intergenic 50.0%
TTAGGGTTAGGAGGAGGAGT+GGG - chr2_2:5424760-5424779 None:intergenic 50.0%
! TTTAGGGTTAGGAGGAGGAG+TGG - chr2_2:5424761-5424780 None:intergenic 50.0%
TTGGGCTTGGACTTGGGTTT+GGG - chr2_2:5424815-5424834 None:intergenic 50.0%
AGTTGATTGGGCTTGGGCTT+GGG - chr2_2:5424833-5424852 None:intergenic 50.0%
TCCAAGAAGAAAACCACCGG+TGG + chr2_2:5424919-5424938 Msa0233090:CDS 50.0%
! ACCACCGGTGGTTTTCTTCT+TGG - chr2_2:5424923-5424942 None:intergenic 50.0%
AAGAAGAAAACCACCGGTGG+TGG + chr2_2:5424922-5424941 Msa0233090:CDS 50.0%
ATCATCAGAACCACCACCAC+CGG - chr2_2:5424938-5424957 None:intergenic 50.0%
! TGATGATGAGAATGAGGCGG+AGG + chr2_2:5424951-5424970 Msa0233090:CDS 50.0%
! CAAAGGGCTTGGGGATTTTG+TGG + chr2_2:5425053-5425072 Msa0233090:CDS 50.0%
AATGCAGCTGCTTCCTTCAG+CGG - chr2_2:5425096-5425115 None:intergenic 50.0%
GGGTATAGCTGTGCTGGATA+AGG + chr2_2:5425470-5425489 Msa0233090:CDS 50.0%
GGAGTCAGATAGGGTTGAGT+TGG + chr2_2:5425524-5425543 Msa0233090:CDS 50.0%
!! GTCAGATAGGGTTGAGTTGG+AGG + chr2_2:5425527-5425546 Msa0233090:CDS 50.0%
!! ATAGGGTTGAGTTGGAGGAG+AGG + chr2_2:5425532-5425551 Msa0233090:CDS 50.0%
! GTTTTTGAATCGCGCTGAGG+TGG + chr2_2:5425587-5425606 Msa0233090:CDS 50.0%
GGTTAGGGAGCAGACTAGAT+TGG + chr2_2:5425608-5425627 Msa0233090:CDS 50.0%
GCAGACTAGATTGGCATTGC+AGG + chr2_2:5425617-5425636 Msa0233090:CDS 50.0%
!! GCGAGGCGTTTCTTTTGCTT+TGG - chr2_2:5424412-5424431 None:intergenic 50.0%
TGAAGGTGGTTGATCCTCGT+CGG - chr2_2:5424467-5424486 None:intergenic 50.0%
!!! GCTGGTTTTTGGGTTGAAGG+TGG - chr2_2:5424481-5424500 None:intergenic 50.0%
!!! TCGGCTGGTTTTTGGGTTGA+AGG - chr2_2:5424484-5424503 None:intergenic 50.0%
! TCGTTGACTACTTTGTCGGC+TGG - chr2_2:5424499-5424518 None:intergenic 50.0%
!! AGGAGGAGGGTTTTTGGAAG+CGG - chr2_2:5424632-5424651 None:intergenic 50.0%
GAGATAGGAGTAGAAGGAGG+AGG - chr2_2:5424646-5424665 None:intergenic 50.0%
GGGGTAGAGATAGGAGTAGA+AGG - chr2_2:5424652-5424671 None:intergenic 50.0%
TGAGCCGGATTCAGATTCAG+CGG - chr2_2:5424680-5424699 None:intergenic 50.0%
TCTGAATCCGGCTCAGAATC+CGG + chr2_2:5424685-5424704 Msa0233090:CDS 50.0%
TTCAGAACCGGATTCTGAGC+CGG - chr2_2:5424695-5424714 None:intergenic 50.0%
GTGGGTTCCGATTTCTGTTC+CGG - chr2_2:5424742-5424761 None:intergenic 50.0%
TTAGGGTTAGGAGGAGGAGT+GGG - chr2_2:5424760-5424779 None:intergenic 50.0%
! TTTAGGGTTAGGAGGAGGAG+TGG - chr2_2:5424761-5424780 None:intergenic 50.0%
TTGGGCTTGGACTTGGGTTT+GGG - chr2_2:5424815-5424834 None:intergenic 50.0%
AGTTGATTGGGCTTGGGCTT+GGG - chr2_2:5424833-5424852 None:intergenic 50.0%
TCCAAGAAGAAAACCACCGG+TGG + chr2_2:5424919-5424938 Msa0233090:CDS 50.0%
! ACCACCGGTGGTTTTCTTCT+TGG - chr2_2:5424923-5424942 None:intergenic 50.0%
AAGAAGAAAACCACCGGTGG+TGG + chr2_2:5424922-5424941 Msa0233090:CDS 50.0%
ATCATCAGAACCACCACCAC+CGG - chr2_2:5424938-5424957 None:intergenic 50.0%
! TGATGATGAGAATGAGGCGG+AGG + chr2_2:5424951-5424970 Msa0233090:CDS 50.0%
! CAAAGGGCTTGGGGATTTTG+TGG + chr2_2:5425053-5425072 Msa0233090:CDS 50.0%
AATGCAGCTGCTTCCTTCAG+CGG - chr2_2:5425096-5425115 None:intergenic 50.0%
GGGTATAGCTGTGCTGGATA+AGG + chr2_2:5425470-5425489 Msa0233090:CDS 50.0%
GGAGTCAGATAGGGTTGAGT+TGG + chr2_2:5425524-5425543 Msa0233090:CDS 50.0%
!! GTCAGATAGGGTTGAGTTGG+AGG + chr2_2:5425527-5425546 Msa0233090:CDS 50.0%
!! ATAGGGTTGAGTTGGAGGAG+AGG + chr2_2:5425532-5425551 Msa0233090:CDS 50.0%
! GTTTTTGAATCGCGCTGAGG+TGG + chr2_2:5425587-5425606 Msa0233090:CDS 50.0%
GGTTAGGGAGCAGACTAGAT+TGG + chr2_2:5425608-5425627 Msa0233090:CDS 50.0%
GCAGACTAGATTGGCATTGC+AGG + chr2_2:5425617-5425636 Msa0233090:CDS 50.0%
TTGATCCTCGTCGGAGGAAG+AGG - chr2_2:5424458-5424477 None:intergenic 55.0%
!! GGAGGAGGGTTTTTGGAAGC+GGG - chr2_2:5424631-5424650 None:intergenic 55.0%
GCGGGTTTAGGGGTAGAGAT+AGG - chr2_2:5424661-5424680 None:intergenic 55.0%
GAGCCGGATTCAGATTCAGC+GGG - chr2_2:5424679-5424698 None:intergenic 55.0%
CTTGGGCTTGGACTTGGGTT+TGG - chr2_2:5424816-5424835 None:intergenic 55.0%
TTGGGCTTGGGCTTGGACTT+GGG - chr2_2:5424821-5424840 None:intergenic 55.0%
! GAGTTGATTGGGCTTGGGCT+TGG - chr2_2:5424834-5424853 None:intergenic 55.0%
AGCCCAAGCCCAATCAACTC+CGG + chr2_2:5424834-5424853 Msa0233090:CDS 55.0%
! CACCGGAGTTGATTGGGCTT+GGG - chr2_2:5424839-5424858 None:intergenic 55.0%
! GGTTGGCACCGGAGTTGATT+GGG - chr2_2:5424845-5424864 None:intergenic 55.0%
! TGGTTGGCACCGGAGTTGAT+TGG - chr2_2:5424846-5424865 None:intergenic 55.0%
! CGCTTAGTTCCGGACTTGGT+TGG - chr2_2:5424862-5424881 None:intergenic 55.0%
! AAGAAAACCACCGGTGGTGG+TGG + chr2_2:5424925-5424944 Msa0233090:CDS 55.0%
TGATGAGAATGAGGCGGAGG+AGG + chr2_2:5424954-5424973 Msa0233090:CDS 55.0%
! GGGGATTTTGTGGCGAAGAC+TGG + chr2_2:5425063-5425082 Msa0233090:CDS 55.0%
GACTGGAAAGGATCCGCTGA+AGG + chr2_2:5425080-5425099 Msa0233090:CDS 55.0%
GGAGAGGTGGAAGAAGTTGC+AGG + chr2_2:5425548-5425567 Msa0233090:CDS 55.0%
TGAATCGCGCTGAGGTGGTT+AGG + chr2_2:5425592-5425611 Msa0233090:CDS 55.0%
GAATCGCGCTGAGGTGGTTA+GGG + chr2_2:5425593-5425612 Msa0233090:CDS 55.0%
TTGATCCTCGTCGGAGGAAG+AGG - chr2_2:5424458-5424477 None:intergenic 55.0%
!! GGAGGAGGGTTTTTGGAAGC+GGG - chr2_2:5424631-5424650 None:intergenic 55.0%
GCGGGTTTAGGGGTAGAGAT+AGG - chr2_2:5424661-5424680 None:intergenic 55.0%
GAGCCGGATTCAGATTCAGC+GGG - chr2_2:5424679-5424698 None:intergenic 55.0%
CTTGGGCTTGGACTTGGGTT+TGG - chr2_2:5424816-5424835 None:intergenic 55.0%
TTGGGCTTGGGCTTGGACTT+GGG - chr2_2:5424821-5424840 None:intergenic 55.0%
! GAGTTGATTGGGCTTGGGCT+TGG - chr2_2:5424834-5424853 None:intergenic 55.0%
AGCCCAAGCCCAATCAACTC+CGG + chr2_2:5424834-5424853 Msa0233090:CDS 55.0%
! CACCGGAGTTGATTGGGCTT+GGG - chr2_2:5424839-5424858 None:intergenic 55.0%
! GGTTGGCACCGGAGTTGATT+GGG - chr2_2:5424845-5424864 None:intergenic 55.0%
! TGGTTGGCACCGGAGTTGAT+TGG - chr2_2:5424846-5424865 None:intergenic 55.0%
! CGCTTAGTTCCGGACTTGGT+TGG - chr2_2:5424862-5424881 None:intergenic 55.0%
! AAGAAAACCACCGGTGGTGG+TGG + chr2_2:5424925-5424944 Msa0233090:CDS 55.0%
TGATGAGAATGAGGCGGAGG+AGG + chr2_2:5424954-5424973 Msa0233090:CDS 55.0%
! GGGGATTTTGTGGCGAAGAC+TGG + chr2_2:5425063-5425082 Msa0233090:CDS 55.0%
GACTGGAAAGGATCCGCTGA+AGG + chr2_2:5425080-5425099 Msa0233090:CDS 55.0%
GGAGAGGTGGAAGAAGTTGC+AGG + chr2_2:5425548-5425567 Msa0233090:CDS 55.0%
TGAATCGCGCTGAGGTGGTT+AGG + chr2_2:5425592-5425611 Msa0233090:CDS 55.0%
GAATCGCGCTGAGGTGGTTA+GGG + chr2_2:5425593-5425612 Msa0233090:CDS 55.0%
ATCCTCGTCGGAGGAAGAGG+CGG - chr2_2:5424455-5424474 None:intergenic 60.0%
AGGTGGTTGATCCTCGTCGG+AGG - chr2_2:5424464-5424483 None:intergenic 60.0%
CTTGGGCTTGGGCTTGGACT+TGG - chr2_2:5424822-5424841 None:intergenic 60.0%
ATTGGGCTTGGGCTTGGGCT+TGG - chr2_2:5424828-5424847 None:intergenic 60.0%
! GCACCGGAGTTGATTGGGCT+TGG - chr2_2:5424840-5424859 None:intergenic 60.0%
! ACTCCGGTGCCAACCAAGTC+CGG + chr2_2:5424850-5424869 Msa0233090:CDS 60.0%
! GTTCCGGACTTGGTTGGCAC+CGG - chr2_2:5424856-5424875 None:intergenic 60.0%
GGCACGCTTAGTTCCGGACT+TGG - chr2_2:5424866-5424885 None:intergenic 60.0%
TTCGGCGGCACGCTTAGTTC+CGG - chr2_2:5424872-5424891 None:intergenic 60.0%
CGTGCCGCCGAAAGTAACAC+TGG + chr2_2:5424880-5424899 Msa0233090:CDS 60.0%
ATCAGAACCACCACCACCGG+TGG - chr2_2:5424935-5424954 None:intergenic 60.0%
!! GGGTTGAGTTGGAGGAGAGG+TGG + chr2_2:5425535-5425554 Msa0233090:CDS 60.0%
GAAGTTGCAGGCTGCCGAGA+TGG + chr2_2:5425560-5425579 Msa0233090:CDS 60.0%
ATCCTCGTCGGAGGAAGAGG+CGG - chr2_2:5424455-5424474 None:intergenic 60.0%
AGGTGGTTGATCCTCGTCGG+AGG - chr2_2:5424464-5424483 None:intergenic 60.0%
CTTGGGCTTGGGCTTGGACT+TGG - chr2_2:5424822-5424841 None:intergenic 60.0%
ATTGGGCTTGGGCTTGGGCT+TGG - chr2_2:5424828-5424847 None:intergenic 60.0%
! GCACCGGAGTTGATTGGGCT+TGG - chr2_2:5424840-5424859 None:intergenic 60.0%
! ACTCCGGTGCCAACCAAGTC+CGG + chr2_2:5424850-5424869 Msa0233090:CDS 60.0%
! GTTCCGGACTTGGTTGGCAC+CGG - chr2_2:5424856-5424875 None:intergenic 60.0%
GGCACGCTTAGTTCCGGACT+TGG - chr2_2:5424866-5424885 None:intergenic 60.0%
TTCGGCGGCACGCTTAGTTC+CGG - chr2_2:5424872-5424891 None:intergenic 60.0%
CGTGCCGCCGAAAGTAACAC+TGG + chr2_2:5424880-5424899 Msa0233090:CDS 60.0%
ATCAGAACCACCACCACCGG+TGG - chr2_2:5424935-5424954 None:intergenic 60.0%
!! GGGTTGAGTTGGAGGAGAGG+TGG + chr2_2:5425535-5425554 Msa0233090:CDS 60.0%
GAAGTTGCAGGCTGCCGAGA+TGG + chr2_2:5425560-5425579 Msa0233090:CDS 60.0%
TCGTCGGAGGAAGAGGCGGT+GGG - chr2_2:5424451-5424470 None:intergenic 65.0%
GGCTGCGGGTATAGCTGTGC+TGG + chr2_2:5425464-5425483 Msa0233090:CDS 65.0%
TCGTCGGAGGAAGAGGCGGT+GGG - chr2_2:5424451-5424470 None:intergenic 65.0%
GGCTGCGGGTATAGCTGTGC+TGG + chr2_2:5425464-5425483 Msa0233090:CDS 65.0%
GTGGGTCGTCGACGAGAGCG+AGG - chr2_2:5424429-5424448 None:intergenic 70.0%
CGGAGGAAGAGGCGGTGGGT+GGG - chr2_2:5424447-5424466 None:intergenic 70.0%
TCGGAGGAAGAGGCGGTGGG+TGG - chr2_2:5424448-5424467 None:intergenic 70.0%
CTCGTCGGAGGAAGAGGCGG+TGG - chr2_2:5424452-5424471 None:intergenic 70.0%
CACCGCCTCTTCCTCCGACG+AGG + chr2_2:5424450-5424469 Msa0233090:CDS 70.0%
GTGGGTCGTCGACGAGAGCG+AGG - chr2_2:5424429-5424448 None:intergenic 70.0%
CGGAGGAAGAGGCGGTGGGT+GGG - chr2_2:5424447-5424466 None:intergenic 70.0%
TCGGAGGAAGAGGCGGTGGG+TGG - chr2_2:5424448-5424467 None:intergenic 70.0%
CTCGTCGGAGGAAGAGGCGG+TGG - chr2_2:5424452-5424471 None:intergenic 70.0%
CACCGCCTCTTCCTCCGACG+AGG + chr2_2:5424450-5424469 Msa0233090:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 5424397 5425665 5424397 ID=Msa0233090;Name=Msa0233090
chr2_2 mRNA 5424397 5425665 5424397 ID=Msa0233090-mRNA-1;Parent=Msa0233090;Name=Msa0233090-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|422
chr2_2 exon 5424397 5425665 5424397 ID=Msa0233090-mRNA-1:exon:2336;Parent=Msa0233090-mRNA-1
chr2_2 CDS 5424397 5425665 5424397 ID=Msa0233090-mRNA-1:cds;Parent=Msa0233090-mRNA-1
Gene Sequence

>Msa0233090

ATGGCGCCAAAGCCAAAGCAAAAGAAACGCCTCGCTCTCGTCGACGACCCACCCACCGCCTCTTCCTCCGACGAGGATCAACCACCTTCAACCCAAAAACCAGCCGACAAAGTAGTCAACGAAGAACATGAAGATTCATCCTCAGAAGAAGAAGGAGATGGAGAAGAAGAAGGTTCTTCATCTGAAGAAGAAGATAATCAAACTCAACAAACTCCTTCGAAAGATTCAAAACCCGCTTCCAAAAACCCTCCTCCTTCTACTCCTATCTCTACCCCTAAACCCGCTGAATCTGAATCCGGCTCAGAATCCGGTTCTGAATCTGGAACCGAATCTGATTCTGAACCGGAACAGAAATCGGAACCCACTCCTCCTCCTAACCCTAAAGTTAAACCACTTGCTTCAAAGCCCATGAAAACCCAAACCCAAGTCCAAGCCCAAGCCCAAGCCCAATCAACTCCGGTGCCAACCAAGTCCGGAACTAAGCGTGCCGCCGAAAGTAACACTGGAAACGATTCAAAACGTTCCAAGAAGAAAACCACCGGTGGTGGTGGTTCTGATGATGAGAATGAGGCGGAGGAGGATGTGAAATTGACTGGTGAAGACTCGAAGAAGAACTTTCAGAGATTGTTTAGTGAAGAAGACGAGCTTGTGATTCTCAAAGGGCTTGGGGATTTTGTGGCGAAGACTGGAAAGGATCCGCTGAAGGAAGCAGCTGCATTTCACGGTTTCGTGAAGAAATCGATGAAAGCTGAGGCCAATGCTCAGCAATTGAAGAGAAAGGTTCGTGGTTTGAAGAAGAAGTTTGAAAGCAGTGACAATTTTACCAAAGCTCATGATAAGAGAGCATTTGATCTTTTCAAGGTTTGGAGCAAAAATGCTTCTAAGGAAGCTGAAGAAAACGGAAAATCTAACGAGAAAATCACAAAGAGTGCTAAGAAGGAAGCTCCTGTTAAAAATGGTGGTTCTGCTAGGAAGGAATTAGCTATAGTTACTAAGAATGAAAGTGGAAAAGTGGAAAGTGGTGTTGGCAAGAGTTTCATTTTGAGCGAACTGGTTAAATTTGATGAGGCTGCGGGTATAGCTGTGCTGGATAAGGATGCTACAAAAAGCGGTTTGGAATTGATGGGGGAGTCAGATAGGGTTGAGTTGGAGGAGAGGTGGAAGAAGTTGCAGGCTGCCGAGATGGAAGTGTTTTTGAATCGCGCTGAGGTGGTTAGGGAGCAGACTAGATTGGCATTGCAGGAACTCAAGAAGAAATCAAGCAAATAG
Protein sequence

>Msa0233090

MAPKPKQKKRLALVDDPPTASSSDEDQPPSTQKPADKVVNEEHEDSSSEEEGDGEEEGSSSEEEDNQTQQTPSKDSKPASKNPPPSTPISTPKPAESESGSESGSESGTESDSEPEQKSEPTPPPNPKVKPLASKPMKTQTQVQAQAQAQSTPVPTKSGTKRAAESNTGNDSKRSKKKTTGGGGSDDENEAEEDVKLTGEDSKKNFQRLFSEEDELVILKGLGDFVAKTGKDPLKEAAAFHGFVKKSMKAEANAQQLKRKVRGLKKKFESSDNFTKAHDKRAFDLFKVWSKNASKEAEENGKSNEKITKSAKKEAPVKNGGSARKELAIVTKNESGKVESGVGKSFILSELVKFDEAAGIAVLDKDATKSGLELMGESDRVELEERWKKLQAAEMEVFLNRAEVVREQTRLALQELKKKSSK*