AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0233450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233450 MtrunA17_Chr2g0281191 96.124 903 19 5 3 905 11 897 0.0 1766
Msa0233450 MtrunA17_Chr3g0107701 41.440 847 403 20 37 825 17 828 0.0 558
Msa0233450 MtrunA17_Chr4g0012861 51.701 588 214 13 315 851 270 838 0.0 551
Msa0233450 MtrunA17_Chr4g0012861 38.129 139 60 3 22 144 4 132 4.91e-23 105
Msa0233450 MtrunA17_Chr5g0432721 39.964 548 230 12 321 825 283 774 1.16e-103 340
Msa0233450 MtrunA17_Chr5g0432721 44.898 98 43 2 24 120 6 93 1.98e-19 94.0
Msa0233450 MtrunA17_Chr7g0244871 67.391 92 30 0 353 444 6 97 8.23e-40 142
Msa0233450 MtrunA17_Chr7g0251891 39.394 132 71 3 359 486 16 142 3.48e-20 89.7
Msa0233450 MtrunA17_Chr7g0237841 41.379 87 50 1 359 444 623 709 2.42e-15 80.9
Msa0233450 MtrunA17_Chr8g0345771 38.182 110 60 4 359 462 171 278 3.87e-14 76.3
Msa0233450 MtrunA17_Chr1g0178071 35.484 124 72 4 342 459 58 179 8.07e-14 73.9
Msa0233450 MtrunA17_Chr7g0276471 38.679 106 57 4 359 458 117 220 1.96e-13 73.6
Msa0233450 MtrunA17_Chr7g0266821 41.000 100 52 5 364 459 65 161 9.06e-13 70.1
Msa0233450 MtrunA17_Chr1g0198661 33.813 139 72 5 359 479 191 327 4.27e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233450 AT4G32010.2 42.152 790 366 16 20 791 3 719 0.0 563
Msa0233450 AT4G32010.1 41.940 794 366 17 20 791 3 723 0.0 557
Msa0233450 AT2G30470.1 49.102 501 234 5 308 792 243 738 7.23e-144 446
Msa0233450 AT2G30470.1 48.485 99 40 2 22 119 9 97 6.77e-21 99.0
Msa0233450 AT4G21550.3 40.351 570 267 16 22 576 15 526 9.11e-119 373
Msa0233450 AT4G21550.1 40.541 592 275 17 24 600 17 546 4.56e-115 368
Msa0233450 AT4G21550.1 47.020 151 51 4 682 832 541 662 1.89e-21 100
Msa0233450 AT4G21550.2 40.072 554 259 16 24 562 17 512 4.47e-113 357
Msa0233450 AT3G26790.1 41.346 104 60 1 359 461 91 194 2.78e-19 90.1
Msa0233450 AT3G24650.1 35.172 145 76 4 322 458 538 672 7.10e-16 82.8
Msa0233450 AT2G36080.4 39.815 108 56 4 359 459 37 142 5.37e-15 74.3
Msa0233450 AT2G36080.2 39.815 108 56 4 359 459 37 142 5.37e-15 74.3
Msa0233450 AT5G06250.4 37.391 115 56 4 359 459 45 157 6.90e-15 76.6
Msa0233450 AT5G06250.5 37.391 115 56 4 359 459 45 157 7.20e-15 76.3
Msa0233450 AT2G36080.1 39.815 108 56 4 359 459 37 142 7.45e-15 75.9
Msa0233450 AT2G36080.3 39.815 108 56 4 359 459 37 142 7.46e-15 75.5
Msa0233450 AT5G06250.2 37.391 115 56 4 359 459 45 157 8.30e-15 76.3
Msa0233450 AT5G06250.3 37.391 115 56 4 359 459 45 157 9.04e-15 75.9
Msa0233450 AT5G06250.1 37.391 115 56 4 359 459 45 157 1.14e-14 75.9
Msa0233450 AT1G28300.1 39.000 100 59 2 345 443 157 255 6.44e-14 74.7
Msa0233450 AT4G01500.1 40.449 89 50 2 359 446 35 121 2.68e-13 72.8
Msa0233450 AT3G11580.4 36.207 116 57 4 359 459 28 141 8.30e-13 69.3
Msa0233450 AT3G11580.2 36.207 116 57 4 359 459 28 141 8.30e-13 69.3
Msa0233450 AT3G11580.5 36.207 116 57 4 359 459 28 141 8.30e-13 69.3
Msa0233450 AT2G46870.1 39.560 91 50 3 359 446 34 122 1.10e-12 70.5
Msa0233450 AT3G11580.1 36.207 116 57 4 359 459 28 141 4.37e-12 68.2
Msa0233450 AT3G11580.3 36.207 116 57 4 359 459 28 141 4.38e-12 69.3
Msa0233450 AT3G25730.1 39.362 94 49 4 359 446 182 273 4.97e-12 68.9
Msa0233450 AT1G25560.1 34.746 118 63 5 359 464 194 309 6.47e-12 68.6

Find 263 sgRNAs with CRISPR-Local

Find 790 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACATTCTGCTGTTGTTATT+TGG 0.148216 2_2:-5785684 None:intergenic
GGATCACTCTCGTACCTTTC+TGG 0.160003 2_2:-5788855 None:intergenic
AATGAAAGAAATGGTCAAAT+TGG 0.226571 2_2:+5784075 Msa0233450:CDS
CTTTCATTTGGGGATGAATA+AGG 0.231314 2_2:-5784060 None:intergenic
TTGTCGCCTGGTTCAGATTC+TGG 0.241849 2_2:+5789864 Msa0233450:CDS
ATTTGACCATTTCTTTCATT+TGG 0.245941 2_2:-5784072 None:intergenic
AGATCAATTTGGCCTTTAAA+TGG 0.248134 2_2:-5789813 None:intergenic
ATCTCTTACAAATCGTTTAT+CGG 0.260733 2_2:+5783542 Msa0233450:CDS
TTTGACCATTTCTTTCATTT+GGG 0.271314 2_2:-5784071 None:intergenic
TGTCTGGAATATCAGCTAAT+TGG 0.273177 2_2:+5783778 Msa0233450:CDS
GGATATTTCAGTTCCGCTTC+TGG 0.277425 2_2:+5785661 Msa0233450:CDS
ATAAAAGAGGGGTAGGAAAA+AGG 0.284887 2_2:+5790217 Msa0233450:three_prime_UTR
AACCCTTCAGGCTGAGAAAT+TGG 0.301947 2_2:-5785603 None:intergenic
GCTGGATATTGAGATCAATT+TGG 0.303683 2_2:-5789824 None:intergenic
ATCATTACCCTCCTTGTTCA+TGG 0.305949 2_2:-5789748 None:intergenic
AATGGTCAAATTGGGGTAAC+TGG 0.309222 2_2:+5784084 Msa0233450:CDS
GCCAGTGATGCTGGGCGAAT+TGG 0.316030 2_2:+5784464 Msa0233450:CDS
CAGACTGGGTGCTTGCTTCC+AGG 0.319580 2_2:-5783625 None:intergenic
TACCCTCCTTGTTCATGGTT+GGG 0.322992 2_2:-5789743 None:intergenic
GCCTGAAGGGAGGTTGGTTA+TGG 0.323362 2_2:+5786635 Msa0233450:CDS
TCATCCGTGTCTCCATTTAA+AGG 0.326774 2_2:+5789801 Msa0233450:CDS
AATAACTTTGACAAAATATA+TGG 0.331049 2_2:+5783708 Msa0233450:CDS
ATCTGTCGCTTAGGTTGAAT+TGG 0.334190 2_2:+5787392 Msa0233450:intron
AGCTAATTGGAATGTCAAAC+TGG 0.337122 2_2:+5783791 Msa0233450:CDS
GTGCACTTCTTCCAGCAAAA+TGG 0.337367 2_2:+5788808 Msa0233450:CDS
ATGAAAGAAATGGTCAAATT+GGG 0.345350 2_2:+5784076 Msa0233450:CDS
GGCCCTTTCCACTAGGCGGC+TGG 0.351565 2_2:-5789509 None:intergenic
CCAGTGATGCTGGGCGAATT+GGG 0.353628 2_2:+5784465 Msa0233450:CDS
GTGCATGTCTGCTTATGCTT+GGG 0.356470 2_2:-5789531 None:intergenic
TCCTGATCATGCTGAAGCTT+TGG 0.362667 2_2:+5789368 Msa0233450:CDS
CCTGAAGGGAGGTTGGTTAT+GGG 0.369927 2_2:+5786636 Msa0233450:CDS
TTTGTTGAAGTGAGAGAAAT+GGG 0.377737 2_2:-5780349 None:intergenic
TTTCAGATGAAGGCAGTTGC+TGG 0.379421 2_2:-5789671 None:intergenic
CTTAGCAACGGTGTTATTCA+TGG 0.385576 2_2:+5790023 Msa0233450:CDS
TCTTCTCACGCCGTAACATA+AGG 0.386896 2_2:-5789593 None:intergenic
AAGTAACACCTTTGTGTTGT+TGG 0.387030 2_2:+5782636 Msa0233450:CDS
AATTGGCTGATCCTAGTTCC+TGG 0.387306 2_2:+5787409 Msa0233450:CDS
CCCATAACCAACCTCCCTTC+AGG 0.389700 2_2:-5786636 None:intergenic
GTGGGTGTTTAGTTGTGGCC+TGG 0.391891 2_2:-5789452 None:intergenic
TTACAGGATGCTCCGGTGCT+TGG 0.393729 2_2:+5788289 Msa0233450:intron
GTTGGTTATGGGATTTAGAA+AGG 0.394057 2_2:+5786647 Msa0233450:CDS
CCCAATTCGCCCAGCATCAC+TGG 0.395558 2_2:-5784465 None:intergenic
ACCTTTGTGTTGTTGGATCC+AGG 0.400804 2_2:+5782643 Msa0233450:CDS
GTCAGTTGTTGCCACGGTAT+TGG 0.401190 2_2:+5784235 Msa0233450:CDS
TGTGGCCACGGCAGGTTAGA+TGG 0.401999 2_2:-5783513 None:intergenic
ACAATGCTTGGGACATGATT+AGG 0.404239 2_2:-5787612 None:intergenic
TTACCCTCCTTGTTCATGGT+TGG 0.412271 2_2:-5789744 None:intergenic
TACAGGATGCTCCGGTGCTT+GGG 0.413480 2_2:+5788290 Msa0233450:intron
GGACATGTTCAGATAATTCA+TGG 0.414352 2_2:+5788829 Msa0233450:CDS
TTCCTTGCATAATAGTAATA+CGG 0.417300 2_2:+5789710 Msa0233450:CDS
TTGGCCCAGGTGTACTGAAT+TGG 0.418132 2_2:+5784254 Msa0233450:CDS
GATTCATCTTCTCAACCGTT+TGG 0.422726 2_2:+5784027 Msa0233450:CDS
CGCAGTAACATTTAGCCGGT+TGG 0.424036 2_2:+5786611 Msa0233450:intron
GGTACGGTGAGCTCTCAAAA+AGG 0.425203 2_2:-5790354 None:intergenic
GACAATTCTTCTTCTCGCTC+TGG 0.431144 2_2:-5789846 None:intergenic
ACTTGCAAATCTAGCAATCC+TGG 0.433506 2_2:+5789404 Msa0233450:CDS
TTGCTTATGAACGGTAATAC+AGG 0.433536 2_2:+5783828 Msa0233450:CDS
CCTTCAATCACCACAATGCT+TGG 0.436508 2_2:-5787624 None:intergenic
CTTTGAGTTTGAGGAATATG+AGG 0.436772 2_2:+5787647 Msa0233450:CDS
ACTTTGAGTGCCAGTGATGC+TGG 0.442164 2_2:+5784455 Msa0233450:CDS
CATCTAGGCAAGCAGTTTAG+TGG 0.442863 2_2:+5784132 Msa0233450:CDS
GGTGCTTGCTTCCAGGGTAC+AGG 0.444210 2_2:-5783618 None:intergenic
CCTTTAGAGTATGAGGCTGT+TGG 0.444476 2_2:-5784002 None:intergenic
ACACGTTCATAGACAAAGAC+TGG 0.448302 2_2:-5790079 None:intergenic
CATTTACCTCTTGACTCATC+AGG 0.448985 2_2:+5784162 Msa0233450:CDS
TGTGCATGTCTGCTTATGCT+TGG 0.449862 2_2:-5789532 None:intergenic
AAATCCTTTGCCATCCGATC+AGG 0.452416 2_2:+5786674 Msa0233450:CDS
TGGGTGTTTAGTTGTGGCCT+GGG 0.452762 2_2:-5789451 None:intergenic
CAGTAGTCATAATGCTGATA+AGG 0.453305 2_2:+5790049 Msa0233450:CDS
TGCTGGGCGAATTGGGCGCT+TGG 0.455987 2_2:+5784472 Msa0233450:CDS
TCAACTAGAGAATGCACATC+TGG 0.456237 2_2:-5783678 None:intergenic
TTCATGTTTGTACATAAAAG+AGG 0.456618 2_2:+5790204 Msa0233450:three_prime_UTR
TCATCCCCAAATGAAAGAAA+TGG 0.456820 2_2:+5784066 Msa0233450:CDS
TGATCATGCTGAAGCTTTGG+AGG 0.457477 2_2:+5789371 Msa0233450:CDS
TCAACATTTGACCAGGAACT+AGG 0.459457 2_2:-5787420 None:intergenic
CTTAAAATCCTCGATGCAAA+AGG 0.461243 2_2:+5785630 Msa0233450:CDS
GTGAAATTCATATTGGTGCT+AGG 0.463726 2_2:+5790100 Msa0233450:exon
CAACAAACTCCACCTCATCT+AGG 0.464917 2_2:+5784117 Msa0233450:CDS
TGGTCAAATGTTGATAAGTC+AGG 0.467081 2_2:+5787429 Msa0233450:CDS
GGAATGTCAAACTGGGTTCA+AGG 0.467906 2_2:+5783799 Msa0233450:CDS
ATTCTTCTTCTCGCTCTGGC+TGG 0.467907 2_2:-5789842 None:intergenic
TTAGTTGTGGCCTGGGAAGA+TGG 0.468284 2_2:-5789444 None:intergenic
AATTAAGTAGAAACATTTCA+AGG 0.469189 2_2:-5790439 None:intergenic
GCAAACAATGCAAGAGCAGC+CGG 0.469885 2_2:-5789484 None:intergenic
GCAACAACTGACTTCTTCCT+CGG 0.470752 2_2:-5784224 None:intergenic
GAATCTTCCTTTAGAGTATG+AGG 0.472283 2_2:-5784009 None:intergenic
TGACTCATCAGGTGAAGCTC+AGG 0.473085 2_2:+5784173 Msa0233450:CDS
TGGAGTCAGTTAGCTGGATC+AGG 0.473225 2_2:+5783594 Msa0233450:CDS
CCAAGCATTGTGGTGATTGA+AGG 0.474053 2_2:+5787624 Msa0233450:CDS
ATGAGGAATGAGGACAAATC+AGG 0.474622 2_2:+5783961 Msa0233450:CDS
ACCTCCCTTCAGGCTCCAAC+CGG 0.476212 2_2:-5786626 None:intergenic
TGAACGTGTGAAATTCATAT+TGG 0.477324 2_2:+5790093 Msa0233450:exon
TTATCACTAGTGAAAATAGA+TGG 0.477763 2_2:-5788316 None:intergenic
CACATGTAATGTCTGTTTAA+CGG 0.477996 2_2:+5789551 Msa0233450:CDS
CCACCAATTTCTCAGCCTGA+AGG 0.479735 2_2:+5785600 Msa0233450:CDS
TCCAAAGCTTCAGCATGATC+AGG 0.479989 2_2:-5789369 None:intergenic
CTCAACTCTGTGATCGATGC+GGG 0.481808 2_2:+5780629 Msa0233450:CDS
ATCCAGCCGCCTAGTGGAAA+GGG 0.481833 2_2:+5789507 Msa0233450:CDS
GATAATGAAGCTAATAAGAC+TGG 0.483266 2_2:+5787274 Msa0233450:CDS
ACTCAAACGCTTCTGGTTGG+AGG 0.485042 2_2:+5782432 Msa0233450:CDS
GTTTCCGTACCCTTATGTTA+CGG 0.488608 2_2:+5789583 Msa0233450:CDS
TGATTTACGTAGGGAAATCA+TGG 0.489278 2_2:+5790291 Msa0233450:three_prime_UTR
CCATTCAAACCTGAATTACA+AGG 0.491131 2_2:-5789197 None:intergenic
CTGGATCAGGACCTGTACCC+TGG 0.491579 2_2:+5783607 Msa0233450:CDS
GAAGCTAATAAGACTGGAAA+CGG 0.491637 2_2:+5787280 Msa0233450:CDS
TCTGGTACTGGAGATTCATC+AGG 0.492385 2_2:+5789957 Msa0233450:CDS
TCAAGCAAAATTTCAGATGA+AGG 0.493848 2_2:-5789681 None:intergenic
GTCACCTGCTTGCAACTGCA+TGG 0.495052 2_2:-5785739 None:intergenic
GAAAATGAAGGCCACTAAGC+AGG 0.495097 2_2:+5789344 Msa0233450:CDS
GATTGAAGGCTTTGAGTTTG+AGG 0.495120 2_2:+5787638 Msa0233450:CDS
TGTTGCCACGGTATTGGCCC+AGG 0.495577 2_2:+5784241 Msa0233450:CDS
TAGCTCCAATTCAGTACACC+TGG 0.498477 2_2:-5784259 None:intergenic
ATAAAGATTGTGGCCACGGC+AGG 0.499237 2_2:-5783521 None:intergenic
CTTCTCACGCCGTAACATAA+GGG 0.500342 2_2:-5789592 None:intergenic
ATGATCAGGATCCTGCTTAG+TGG 0.500883 2_2:-5789355 None:intergenic
AGACTGGGTGCTTGCTTCCA+GGG 0.501160 2_2:-5783624 None:intergenic
GGTCTACTACTAAGAAAGGT+TGG 0.501695 2_2:+5780584 Msa0233450:CDS
GGAGGCTCTCCCATCTTCCC+AGG 0.502386 2_2:+5789434 Msa0233450:CDS
TGAAATTCATATTGGTGCTA+GGG 0.503538 2_2:+5790101 Msa0233450:exon
CTGAGAAATTGGTGGGAAGT+AGG 0.504512 2_2:-5785592 None:intergenic
GAGCAGCCGGGTCTATGTCG+TGG 0.505284 2_2:-5789471 None:intergenic
ACAAAATATATGGCAATGAA+AGG 0.507284 2_2:+5783718 Msa0233450:CDS
TTCAGATGAAGGCAGTTGCT+GGG 0.508534 2_2:-5789670 None:intergenic
TCCTTGCATAATAGTAATAC+GGG 0.509224 2_2:+5789711 Msa0233450:CDS
CATCCAGCCGCCTAGTGGAA+AGG 0.510624 2_2:+5789506 Msa0233450:CDS
GAGACATGTCTGGCAAAAGT+TGG 0.514952 2_2:+5783574 Msa0233450:CDS
TTTGTTGTATTGCAGGAATG+AGG 0.515892 2_2:+5783944 Msa0233450:intron
TTTGTACATAAAAGAGGGGT+AGG 0.516099 2_2:+5790210 Msa0233450:three_prime_UTR
ATCAGGTAGTCAGTCACAGC+AGG 0.516556 2_2:+5789974 Msa0233450:CDS
CCAACAGCCTCATACTCTAA+AGG 0.524975 2_2:+5784002 Msa0233450:CDS
ACTTTGTTGAACTCTGGTAC+TGG 0.527710 2_2:+5789945 Msa0233450:CDS
ATACATAGCAAAAGAAGCAC+TGG 0.528619 2_2:+5787452 Msa0233450:CDS
CAGCAGACTTTGTTGAACTC+TGG 0.530003 2_2:+5789939 Msa0233450:CDS
TCCACTCAAACGCTTCTGGT+TGG 0.530665 2_2:+5782429 Msa0233450:CDS
GTAAAGCATTCAATTCCTCC+TGG 0.532051 2_2:-5782661 None:intergenic
CTTGCAAATCTAGCAATCCT+GGG 0.532774 2_2:+5789405 Msa0233450:CDS
CTTCAATCACCACAATGCTT+GGG 0.534367 2_2:-5787623 None:intergenic
TGCTTGGGGCCCTTTCCACT+AGG 0.534401 2_2:-5789516 None:intergenic
ATGAACAAGGAGGGTAATGA+TGG 0.534494 2_2:+5789750 Msa0233450:CDS
AACAACGACGAATGAAAGAG+AGG 0.538280 2_2:-5780415 None:intergenic
GAGAGATATAGAGACATGTC+TGG 0.539014 2_2:+5783564 Msa0233450:CDS
TCATGTTTGTACATAAAAGA+GGG 0.539130 2_2:+5790205 Msa0233450:three_prime_UTR
GAATTGTGAGACTTGTAGAA+AGG 0.540816 2_2:+5782454 Msa0233450:CDS
CACCAATTTCTCAGCCTGAA+GGG 0.542196 2_2:+5785601 Msa0233450:CDS
AATGGAGCTGAATGAGGTAG+TGG 0.544122 2_2:+5790314 Msa0233450:three_prime_UTR
CAACAACTGACTTCTTCCTC+GGG 0.544517 2_2:-5784223 None:intergenic
GTGAAGCTCAGGTTCGCAAT+GGG 0.546771 2_2:+5784184 Msa0233450:CDS
CTTGCAAAGCTTGTTGAAGT+GGG 0.549392 2_2:+5790139 Msa0233450:three_prime_UTR
CAGTCCATGCAGTTGCAAGC+AGG 0.549929 2_2:+5785735 Msa0233450:CDS
GAATGTCAAACTGGGTTCAA+GGG 0.552101 2_2:+5783800 Msa0233450:CDS
GAGAATGCACATCTGGAGGC+TGG 0.553030 2_2:-5783671 None:intergenic
TAGTTGTGGCCTGGGAAGAT+GGG 0.553270 2_2:-5789443 None:intergenic
TGCATGTCTGCTTATGCTTG+GGG 0.556813 2_2:-5789530 None:intergenic
CGAGAAGAAGAATTGTCGCC+TGG 0.557693 2_2:+5789852 Msa0233450:CDS
AGAGATAAAGATTGTGGCCA+CGG 0.559976 2_2:-5783525 None:intergenic
ATTCTGACTGTAAAGACTTG+AGG 0.560124 2_2:+5780563 Msa0233450:CDS
ATAATTCATGGGATCCAGAA+AGG 0.562018 2_2:+5788841 Msa0233450:CDS
TTGAGGTCTACTACTAAGAA+AGG 0.563625 2_2:+5780580 Msa0233450:CDS
GTTGGAGCCTGAAGGGAGGT+TGG 0.564406 2_2:+5786629 Msa0233450:CDS
ATTAAGTAGAAACATTTCAA+GGG 0.566789 2_2:-5790438 None:intergenic
AAAAGTTGGAGTCAGTTAGC+TGG 0.568196 2_2:+5783588 Msa0233450:CDS
AGAAGCTGAATTGAACAGAC+TGG 0.568636 2_2:-5783640 None:intergenic
TCCGTAGTTCATATCCACTT+CGG 0.569611 2_2:+5790171 Msa0233450:three_prime_UTR
AACTGCTTGCCTAGATGAGG+TGG 0.570136 2_2:-5784126 None:intergenic
TCCAACCAGAAGCGTTTGAG+TGG 0.572844 2_2:-5782430 None:intergenic
TGCTTGGGACATGATTAGGA+GGG 0.573196 2_2:-5787608 None:intergenic
TAATAGAGCTGAAGATTACA+TGG 0.574564 2_2:+5787559 Msa0233450:CDS
AGCAGCCGGGTCTATGTCGT+GGG 0.575738 2_2:-5789470 None:intergenic
TTTAGCCGGTTGGAGCCTGA+AGG 0.576874 2_2:+5786621 Msa0233450:CDS
TTTCAATGTTGTTGATCAGG+TGG 0.578147 2_2:-5790375 None:intergenic
ATAGATGGCTTCCCAAGCAC+CGG 0.579291 2_2:-5788301 None:intergenic
CAATGCAGATATTACCTGAT+CGG 0.581192 2_2:-5786688 None:intergenic
GCAGATATTACCTGATCGGA+TGG 0.582173 2_2:-5786684 None:intergenic
ATGTCGTGGGTGTTTAGTTG+TGG 0.582924 2_2:-5789457 None:intergenic
CCTTCAGGCTGAGAAATTGG+TGG 0.583560 2_2:-5785600 None:intergenic
GGTGAAGCTCAGGTTCGCAA+TGG 0.584201 2_2:+5784183 Msa0233450:CDS
TGTTGTTATTTGGCCAGAAG+CGG 0.585150 2_2:-5785674 None:intergenic
CTTGTGTTACCAGAAAATAG+TGG 0.585786 2_2:-5790256 None:intergenic
AACTGAAGAAGAAGAAGCCA+TGG 0.586971 2_2:-5780485 None:intergenic
TAAGGTACAGATAAACCAAA+CGG 0.588759 2_2:-5784042 None:intergenic
TCATGGAATGGAGCTGAATG+AGG 0.589024 2_2:+5790308 Msa0233450:three_prime_UTR
GATCATGCTGAAGCTTTGGA+GGG 0.590184 2_2:+5789372 Msa0233450:CDS
ACCCGTATTACTATTATGCA+AGG 0.591046 2_2:-5789712 None:intergenic
GCAGGTAGGAGATGTTGTGA+GGG 0.592609 2_2:+5789992 Msa0233450:CDS
AGGGACATGTTGCTTATGAA+CGG 0.593802 2_2:+5783819 Msa0233450:CDS
AATCCTCGATGCAAAAGGAA+AGG 0.594386 2_2:+5785635 Msa0233450:CDS
TACATAGCAAAAGAAGCACT+GGG 0.595326 2_2:+5787453 Msa0233450:CDS
AGCAGTTTCCAAGAAAATGA+AGG 0.595741 2_2:+5789332 Msa0233450:intron
TTGACCATTTCTTTCATTTG+GGG 0.596631 2_2:-5784070 None:intergenic
TTGCAAAGCTTGTTGAAGTG+GGG 0.600330 2_2:+5790140 Msa0233450:three_prime_UTR
GCTGGAAGAAGTGCACATGC+TGG 0.600458 2_2:-5788801 None:intergenic
CAGTTGCAAGCAGGTGACAC+AGG 0.601495 2_2:+5785744 Msa0233450:CDS
TACGTAGGGAAATCATGGAA+TGG 0.601921 2_2:+5790296 Msa0233450:three_prime_UTR
GTTTGCATCCAGCCGCCTAG+TGG 0.603172 2_2:+5789501 Msa0233450:CDS
CAAACAATGCAAGAGCAGCC+GGG 0.603823 2_2:-5789483 None:intergenic
CTTCCTCGGGCATCTGCTCG+AGG 0.605073 2_2:-5784210 None:intergenic
ACAACGACGAATGAAAGAGA+GGG 0.605449 2_2:-5780414 None:intergenic
ACACCACCAGAATCTGAACC+AGG 0.607711 2_2:-5789870 None:intergenic
ATTACCTGATCGGATGGCAA+AGG 0.607719 2_2:-5786678 None:intergenic
CTCAGCCATCTAACCTGCCG+TGG 0.607811 2_2:+5783508 Msa0233450:intron
ATGCACATCTGGAGGCTGGT+CGG 0.608646 2_2:-5783667 None:intergenic
TGACTTATCAACATTTGACC+AGG 0.608800 2_2:-5787427 None:intergenic
GACATGTTCAGATAATTCAT+GGG 0.609897 2_2:+5788830 Msa0233450:CDS
GCCGGTTGGAGCCTGAAGGG+AGG 0.610013 2_2:+5786625 Msa0233450:CDS
TAGTAGCCCAACCATGAACA+AGG 0.610538 2_2:+5789737 Msa0233450:CDS
TTAGCCGGTTGGAGCCTGAA+GGG 0.610617 2_2:+5786622 Msa0233450:CDS
ATGCTTGGGACATGATTAGG+AGG 0.611515 2_2:-5787609 None:intergenic
CTTCAGGCTGAGAAATTGGT+GGG 0.611961 2_2:-5785599 None:intergenic
CACGTTCATAGACAAAGACT+GGG 0.613315 2_2:-5790078 None:intergenic
TGAAAGAAATGGTCAAATTG+GGG 0.613362 2_2:+5784077 Msa0233450:CDS
CTTTGAGTGCCAGTGATGCT+GGG 0.613991 2_2:+5784456 Msa0233450:CDS
TCTTGCAAAGCTTGTTGAAG+TGG 0.614065 2_2:+5790138 Msa0233450:three_prime_UTR
TTTGTAAGAGATAAAGATTG+TGG 0.616956 2_2:-5783531 None:intergenic
GAAGAAGTCAGTTGTTGCCA+CGG 0.618200 2_2:+5784229 Msa0233450:CDS
CTAAACTGCTTGCCTAGATG+AGG 0.618575 2_2:-5784129 None:intergenic
TGAATAGTAAGACGCCGAAG+TGG 0.619978 2_2:-5790185 None:intergenic
CATAGCAGTAGTAGTAACCA+TGG 0.622979 2_2:+5780468 Msa0233450:exon
GCCGAAGTGGATATGAACTA+CGG 0.623117 2_2:-5790172 None:intergenic
TCGATGCAAAAGGAAAGGAA+TGG 0.623875 2_2:+5785640 Msa0233450:CDS
ATTACATGGCAAGAAGCTCA+AGG 0.624749 2_2:+5787573 Msa0233450:CDS
AGCAGGTAGGAGATGTTGTG+AGG 0.624795 2_2:+5789991 Msa0233450:CDS
CTTGGGACATGATTAGGAGG+GGG 0.628705 2_2:-5787606 None:intergenic
AGCTCCAATTCAGTACACCT+GGG 0.629096 2_2:-5784258 None:intergenic
AATGTGAACATTGTCTGAAG+TGG 0.629729 2_2:+5788769 Msa0233450:CDS
CGACCTCGAGCAGATGCCCG+AGG 0.632234 2_2:+5784207 Msa0233450:CDS
ACATCATAGTGATTTACGTA+GGG 0.632534 2_2:+5790282 Msa0233450:three_prime_UTR
GCTCAACTCTGTGATCGATG+CGG 0.632790 2_2:+5780628 Msa0233450:CDS
GGTAGTCAGTCACAGCAGGT+AGG 0.633855 2_2:+5789978 Msa0233450:CDS
GCTTCACCTGATGAGTCAAG+AGG 0.634530 2_2:-5784168 None:intergenic
GCTAATTGGAATGTCAAACT+GGG 0.636082 2_2:+5783792 Msa0233450:CDS
TATTGCAGGAATGAGGAATG+AGG 0.637424 2_2:+5783951 Msa0233450:intron
TTGGCCTTTAAATGGAGACA+CGG 0.638401 2_2:-5789805 None:intergenic
AAAGGTTGGAGACTTCGCAC+TGG 0.641834 2_2:+5780598 Msa0233450:CDS
TTGCAAATCTAGCAATCCTG+GGG 0.642083 2_2:+5789406 Msa0233450:CDS
TAATCATGTCCCAAGCATTG+TGG 0.643328 2_2:+5787614 Msa0233450:CDS
CATGTTTGTACATAAAAGAG+GGG 0.646204 2_2:+5790206 Msa0233450:three_prime_UTR
AGCCCAACCATGAACAAGGA+GGG 0.646404 2_2:+5789741 Msa0233450:CDS
GTTCTGATGATGATCCTCAC+CGG 0.646876 2_2:+5789772 Msa0233450:CDS
ATTCAAACCTGAATTACAAG+GGG 0.647708 2_2:-5789195 None:intergenic
CATTCAAACCTGAATTACAA+GGG 0.647900 2_2:-5789196 None:intergenic
ATGTTGTTGATCAGGTGGTA+CGG 0.648704 2_2:-5790370 None:intergenic
GCTTGGGACATGATTAGGAG+GGG 0.648870 2_2:-5787607 None:intergenic
ACTAGAGAATGCACATCTGG+AGG 0.649096 2_2:-5783675 None:intergenic
ATGGAGCTGAATGAGGTAGT+GGG 0.654269 2_2:+5790315 Msa0233450:three_prime_UTR
ATCGATCACAGAGTTGAGCT+AGG 0.654293 2_2:-5780624 None:intergenic
CACGCCGTAACATAAGGGTA+CGG 0.656740 2_2:-5789587 None:intergenic
GAAGCTGAATTGAACAGACT+GGG 0.665746 2_2:-5783639 None:intergenic
AAACACCCACGACATAGACC+CGG 0.669434 2_2:+5789465 Msa0233450:CDS
AACTGCATGGACTGTATGCA+CGG 0.670080 2_2:-5785726 None:intergenic
AGGGAAGTGAAGCTTAGCAA+CGG 0.671793 2_2:+5790011 Msa0233450:CDS
GAAATTCATATTGGTGCTAG+GGG 0.672820 2_2:+5790102 Msa0233450:exon
TTGGGGCCCTTTCCACTAGG+CGG 0.682669 2_2:-5789513 None:intergenic
TGTTGGCACATATTTAAACA+CGG 0.683366 2_2:-5783985 None:intergenic
TCGCCTGGTTCAGATTCTGG+TGG 0.694439 2_2:+5789867 Msa0233450:CDS
GACATCATAGTGATTTACGT+AGG 0.696019 2_2:+5790281 Msa0233450:three_prime_UTR
ACATTTCAGCAGCAGCATCG+TGG 0.696358 2_2:-5789905 None:intergenic
GTACACCTGGGCCAATACCG+TGG 0.704903 2_2:-5784246 None:intergenic
TTTGTGTTGTTGGATCCAGG+AGG 0.707436 2_2:+5782646 Msa0233450:CDS
TCCTGGATCCAACAACACAA+AGG 0.713489 2_2:-5782644 None:intergenic
TAGCCCAACCATGAACAAGG+AGG 0.716754 2_2:+5789740 Msa0233450:CDS
TGCAAATCTAGCAATCCTGG+GGG 0.721871 2_2:+5789407 Msa0233450:CDS
TTCAAACCTGAATTACAAGG+GGG 0.743313 2_2:-5789194 None:intergenic
ACATAGCAAAAGAAGCACTG+GGG 0.799937 2_2:+5787454 Msa0233450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAAAGTTTTGTTTTTT+CGG + chr2_2:5780734-5780753 Msa0233450:intron 10.0%
!! AAATTATAAGAAGATATCAA+AGG - chr2_2:5781544-5781563 None:intergenic 15.0%
!! TTTGATATCTTCTTATAATT+TGG + chr2_2:5781543-5781562 Msa0233450:intron 15.0%
!! TTGATATCTTCTTATAATTT+GGG + chr2_2:5781544-5781563 Msa0233450:intron 15.0%
!!! AGATACAAATAGTTTTAAAT+AGG + chr2_2:5782528-5782547 Msa0233450:intron 15.0%
!! AATAACTTTGACAAAATATA+TGG + chr2_2:5783708-5783727 Msa0233450:CDS 15.0%
!! TTAATAAGTATGTAATTTGA+AGG - chr2_2:5784306-5784325 None:intergenic 15.0%
!! TACTTATTAAGTAATTACAT+TGG + chr2_2:5784316-5784335 Msa0233450:intron 15.0%
!! AATTATGTATAAATCCATAT+CGG + chr2_2:5784370-5784389 Msa0233450:intron 15.0%
!!! TTTGTTGCATAATTTTTTTT+GGG - chr2_2:5785250-5785269 None:intergenic 15.0%
!!! TTTTGTTGCATAATTTTTTT+TGG - chr2_2:5785251-5785270 None:intergenic 15.0%
!! TTAAATATCATGAAAAAGTA+AGG - chr2_2:5785525-5785544 None:intergenic 15.0%
!! TGTCAAAAAAAAAAATAGAA+AGG - chr2_2:5787072-5787091 None:intergenic 15.0%
!! ATATTTCCTAATTACTATAA+AGG + chr2_2:5787102-5787121 Msa0233450:intron 15.0%
!! AACTTTATACAAATAGATAT+AGG - chr2_2:5787194-5787213 None:intergenic 15.0%
!! ATATCTATTTGTATAAAGTT+CGG + chr2_2:5787194-5787213 Msa0233450:intron 15.0%
!! AGCGTATTAATTTATATTAT+TGG - chr2_2:5787777-5787796 None:intergenic 15.0%
!!! TATTGATTGCATATTTATAT+AGG - chr2_2:5789076-5789095 None:intergenic 15.0%
!! TATAATAAATTGCTAAACAA+TGG + chr2_2:5789281-5789300 Msa0233450:intron 15.0%
!! ACAACTAATTAAAAATTGTT+TGG - chr2_2:5790483-5790502 None:intergenic 15.0%
!!! TTTTAATTAGTTGTTTAGTT+AGG + chr2_2:5790489-5790508 Msa0233450:three_prime_UTR 15.0%
!!! TTTTTTTTTATTCAGCAAGA+AGG - chr2_2:5781211-5781230 None:intergenic 20.0%
!!! TATATCAAATTCCCTTTTTT+CGG - chr2_2:5781269-5781288 None:intergenic 20.0%
!! AAAAGGGAATTTGATATAAA+AGG + chr2_2:5781271-5781290 Msa0233450:intron 20.0%
!! AACCTAAAAAAAGAATCTTA+TGG - chr2_2:5782114-5782133 None:intergenic 20.0%
!!! AACAATCAATTTTTTACTGA+AGG - chr2_2:5782360-5782379 None:intergenic 20.0%
!! AAAACTATTTGTATCTAACA+TGG - chr2_2:5782524-5782543 None:intergenic 20.0%
!!! ATTGAAAATTGCTATTGTTA+CGG + chr2_2:5783043-5783062 Msa0233450:intron 20.0%
!! AGAAATCAACAAACAAAAAT+AGG - chr2_2:5783228-5783247 None:intergenic 20.0%
!! TCTTATTATTAAGACCTATT+TGG + chr2_2:5783436-5783455 Msa0233450:intron 20.0%
!!! AGATGAATCTTTTTATAACA+TGG + chr2_2:5783899-5783918 Msa0233450:intron 20.0%
!! TTATTACAGAATTAGAACTA+GGG - chr2_2:5784418-5784437 None:intergenic 20.0%
!! CAGTAAATTCAATTTACTAT+GGG - chr2_2:5784601-5784620 None:intergenic 20.0%
!! ACAGTAAATTCAATTTACTA+TGG - chr2_2:5784602-5784621 None:intergenic 20.0%
!! AAAACTGCATTAATAAAATC+AGG + chr2_2:5784860-5784879 Msa0233450:intron 20.0%
!!! TTGTTGCATAATTTTTTTTG+GGG - chr2_2:5785249-5785268 None:intergenic 20.0%
!! TGATAATCTTAAGATATTCT+TGG + chr2_2:5786085-5786104 Msa0233450:intron 20.0%
!! TTTAGAAAACAGAAAACTTT+CGG - chr2_2:5786170-5786189 None:intergenic 20.0%
!!! TGCTTTGATATAGATTTTTT+TGG + chr2_2:5786940-5786959 Msa0233450:intron 20.0%
!!! GATATAGATTTTTTTGGATA+TGG + chr2_2:5786946-5786965 Msa0233450:intron 20.0%
!!! TTCAATTTTTATATGCTGTT+TGG + chr2_2:5787001-5787020 Msa0233450:intron 20.0%
!!! TCAATTTTTATATGCTGTTT+GGG + chr2_2:5787002-5787021 Msa0233450:intron 20.0%
!!! TTTTTTTTTGACAAAAGTTG+TGG + chr2_2:5787079-5787098 Msa0233450:intron 20.0%
!! AACTATCCTTTATAGTAATT+AGG - chr2_2:5787111-5787130 None:intergenic 20.0%
!! CAAAAAGAAAAATATGTGAA+CGG - chr2_2:5787251-5787270 None:intergenic 20.0%
!! AAAGAGAAAAAACAACATAT+TGG + chr2_2:5787497-5787516 Msa0233450:CDS 20.0%
!! AAGAGAAAAAACAACATATT+GGG + chr2_2:5787498-5787517 Msa0233450:CDS 20.0%
!!! TATTTTCACTAGTGATAATA+TGG + chr2_2:5788321-5788340 Msa0233450:CDS 20.0%
!!! ATTTTCACTAGTGATAATAT+GGG + chr2_2:5788322-5788341 Msa0233450:CDS 20.0%
!! TAAATAACTCATCCTTAATT+CGG + chr2_2:5788346-5788365 Msa0233450:intron 20.0%
!!! TGTATTATTTTTATATGGTG+TGG + chr2_2:5788419-5788438 Msa0233450:intron 20.0%
!! TTGGGAAAAAATATAAGAAA+TGG + chr2_2:5788920-5788939 Msa0233450:intron 20.0%
!! TATTGTTAATTGCATTTGTT+TGG + chr2_2:5789308-5789327 Msa0233450:intron 20.0%
!! ATTAAGTAGAAACATTTCAA+GGG - chr2_2:5790441-5790460 None:intergenic 20.0%
!! AATTAAGTAGAAACATTTCA+AGG - chr2_2:5790442-5790461 None:intergenic 20.0%
!!! TTTTATTTTCCCTGCAAATT+TGG + chr2_2:5780810-5780829 Msa0233450:intron 25.0%
! AAACTTTATCCAAATTTGCA+GGG - chr2_2:5780822-5780841 None:intergenic 25.0%
! TAAACTTTATCCAAATTTGC+AGG - chr2_2:5780823-5780842 None:intergenic 25.0%
!! CTAATACAAAACTTTTGTAC+TGG - chr2_2:5780969-5780988 None:intergenic 25.0%
! AAATGAAAACAAATAAGTCG+TGG + chr2_2:5781108-5781127 Msa0233450:intron 25.0%
! TAATGTATTTGTTTGAGTGT+AGG + chr2_2:5781132-5781151 Msa0233450:intron 25.0%
! TACAAACTGTTACAATTCAT+GGG - chr2_2:5781374-5781393 None:intergenic 25.0%
! TTACAAACTGTTACAATTCA+TGG - chr2_2:5781375-5781394 None:intergenic 25.0%
! TTACAACAATTGATTGATCT+AGG + chr2_2:5781514-5781533 Msa0233450:intron 25.0%
! ATAATGAATGGAACTATGTT+GGG - chr2_2:5781830-5781849 None:intergenic 25.0%
! TTTGATATGAGATGTGTATT+TGG - chr2_2:5781954-5781973 None:intergenic 25.0%
! TAACAAATACAGAAAACCTA+GGG - chr2_2:5782007-5782026 None:intergenic 25.0%
! TTAACAAATACAGAAAACCT+AGG - chr2_2:5782008-5782027 None:intergenic 25.0%
!!! TGCCATAAGATTCTTTTTTT+AGG + chr2_2:5782109-5782128 Msa0233450:intron 25.0%
! AAATGGTTCATTGAACAATA+CGG - chr2_2:5782153-5782172 None:intergenic 25.0%
!!! GTTGCTTATCTTATTTCTTT+TGG + chr2_2:5782296-5782315 Msa0233450:intron 25.0%
!!! AAGGTGATCTATCTTTATTT+TGG + chr2_2:5782473-5782492 Msa0233450:intron 25.0%
! AAAAACTCTAACTTAGCTTA+GGG - chr2_2:5782556-5782575 None:intergenic 25.0%
! AAAAAACTCTAACTTAGCTT+AGG - chr2_2:5782557-5782576 None:intergenic 25.0%
! ATTCAAAAGAGTAACTAACA+GGG - chr2_2:5783320-5783339 None:intergenic 25.0%
! AAGATATTATTCAAGCATCA+TGG - chr2_2:5783420-5783439 None:intergenic 25.0%
! TTTGTAAGAGATAAAGATTG+TGG - chr2_2:5783534-5783553 None:intergenic 25.0%
! ATCTCTTACAAATCGTTTAT+CGG + chr2_2:5783542-5783561 Msa0233450:CDS 25.0%
! ACAAAATATATGGCAATGAA+AGG + chr2_2:5783718-5783737 Msa0233450:CDS 25.0%
!! TTTTTCTTTTCCAATGATGA+GGG - chr2_2:5783750-5783769 None:intergenic 25.0%
!! ATTTTTCTTTTCCAATGATG+AGG - chr2_2:5783751-5783770 None:intergenic 25.0%
! ATCATTGGAAAAGAAAAATG+AGG + chr2_2:5783752-5783771 Msa0233450:CDS 25.0%
!! ATCTTTTTATAACATGGAGA+TGG + chr2_2:5783905-5783924 Msa0233450:intron 25.0%
! TTTGACCATTTCTTTCATTT+GGG - chr2_2:5784074-5784093 None:intergenic 25.0%
! ATTTGACCATTTCTTTCATT+TGG - chr2_2:5784075-5784094 None:intergenic 25.0%
! AATGAAAGAAATGGTCAAAT+TGG + chr2_2:5784075-5784094 Msa0233450:CDS 25.0%
! ATGAAAGAAATGGTCAAATT+GGG + chr2_2:5784076-5784095 Msa0233450:CDS 25.0%
! GTTATTACAGAATTAGAACT+AGG - chr2_2:5784419-5784438 None:intergenic 25.0%
!! TCTATCTTTAGCTTAATGTA+TGG + chr2_2:5784979-5784998 Msa0233450:intron 25.0%
! CTATTTGGTCATAAATCATA+CGG - chr2_2:5785078-5785097 None:intergenic 25.0%
!!! TGTTGCATAATTTTTTTTGG+GGG - chr2_2:5785248-5785267 None:intergenic 25.0%
! TTCTTAAAGCATATGAACTT+TGG - chr2_2:5785309-5785328 None:intergenic 25.0%
!!! GTTCATATGCTTTAAGAAAA+TGG + chr2_2:5785311-5785330 Msa0233450:intron 25.0%
!! TTTACACACTCGTATTATTT+TGG + chr2_2:5785426-5785445 Msa0233450:intron 25.0%
!! TAGTCTTTTAATGTTTTGCA+TGG + chr2_2:5785491-5785510 Msa0233450:intron 25.0%
! AATATCATGAAAAAGTAAGG+TGG - chr2_2:5785522-5785541 None:intergenic 25.0%
! TGAGTAAAACTTAAGCTTAA+TGG + chr2_2:5785832-5785851 Msa0233450:intron 25.0%
! GAGTAAAACTTAAGCTTAAT+GGG + chr2_2:5785833-5785852 Msa0233450:intron 25.0%
!! GTTTCTTGTGTCTTTAAAAA+AGG + chr2_2:5786015-5786034 Msa0233450:intron 25.0%
! ATTATTTCGTTCCTTACAAA+GGG - chr2_2:5786053-5786072 None:intergenic 25.0%
! TAATTTGAGTGTACATTGTA+TGG + chr2_2:5786734-5786753 Msa0233450:intron 25.0%
! TGAAATCCGAAATTACAAAA+GGG - chr2_2:5786985-5787004 None:intergenic 25.0%
! TTGAAATCCGAAATTACAAA+AGG - chr2_2:5786986-5787005 None:intergenic 25.0%
!! TATGGCTAATCTTATAGTTT+TGG + chr2_2:5787040-5787059 Msa0233450:intron 25.0%
!! TCACATATTTTTCTTTTTGC+AGG + chr2_2:5787252-5787271 Msa0233450:intron 25.0%
! ACGTCTAAAAATTGAAAATG+AGG + chr2_2:5787533-5787552 Msa0233450:CDS 25.0%
!! TACTTAAAGAAAGCACATTT+AGG - chr2_2:5787752-5787771 None:intergenic 25.0%
! AATTAATACGCTTTCATCTT+CGG + chr2_2:5787785-5787804 Msa0233450:intron 25.0%
!!! GGCTAGTTTTATATAAACAA+AGG - chr2_2:5787828-5787847 None:intergenic 25.0%
!! TTACAAGTCTTATAACAACA+TGG - chr2_2:5787932-5787951 None:intergenic 25.0%
! TTATCACTAGTGAAAATAGA+TGG - chr2_2:5788319-5788338 None:intergenic 25.0%
!! TTTTCACTAGTGATAATATG+GGG + chr2_2:5788323-5788342 Msa0233450:CDS 25.0%
! ATTTGATCAAAACCGAATTA+AGG - chr2_2:5788361-5788380 None:intergenic 25.0%
!! AATTAAGTTCTGATTTAGAC+TGG + chr2_2:5788665-5788684 Msa0233450:intron 25.0%
!! ATTAAGTTCTGATTTAGACT+GGG + chr2_2:5788666-5788685 Msa0233450:intron 25.0%
! TTCCTTGCATAATAGTAATA+CGG + chr2_2:5789710-5789729 Msa0233450:CDS 25.0%
! TTCATGTTTGTACATAAAAG+AGG + chr2_2:5790204-5790223 Msa0233450:three_prime_UTR 25.0%
! TCATGTTTGTACATAAAAGA+GGG + chr2_2:5790205-5790224 Msa0233450:three_prime_UTR 25.0%
! TCAAGGGTTAAAAATCAATT+GGG - chr2_2:5790425-5790444 None:intergenic 25.0%
! TTCAAGGGTTAAAAATCAAT+TGG - chr2_2:5790426-5790445 None:intergenic 25.0%
TTTGTTGAAGTGAGAGAAAT+GGG - chr2_2:5780352-5780371 None:intergenic 30.0%
! TTTTGTTGAAGTGAGAGAAA+TGG - chr2_2:5780353-5780372 None:intergenic 30.0%
!!! AGAATTGAAGCATCGTTTTA+AGG - chr2_2:5780548-5780567 None:intergenic 30.0%
GATGAAATGAAACTAACAAG+AGG + chr2_2:5781306-5781325 Msa0233450:intron 30.0%
AATGAAACTAACAAGAGGAA+AGG + chr2_2:5781311-5781330 Msa0233450:intron 30.0%
ACAAACTGTTACAATTCATG+GGG - chr2_2:5781373-5781392 None:intergenic 30.0%
ACTACTTAAGCTATATCTCT+AGG + chr2_2:5781629-5781648 Msa0233450:intron 30.0%
GATAATGAATGGAACTATGT+TGG - chr2_2:5781831-5781850 None:intergenic 30.0%
ACATAGTTCCATTCATTATC+TGG + chr2_2:5781831-5781850 Msa0233450:intron 30.0%
TAACAAACAGTGAACACAAA+TGG - chr2_2:5782170-5782189 None:intergenic 30.0%
! TGTTCACTGTTTGTTAATGT+TGG + chr2_2:5782174-5782193 Msa0233450:intron 30.0%
!!! TTAGTTCTGCTTTTGAAGAA+GGG + chr2_2:5782390-5782409 Msa0233450:CDS 30.0%
! TACCAGAATAACATTTTTGC+GGG - chr2_2:5782692-5782711 None:intergenic 30.0%
! CTACCAGAATAACATTTTTG+CGG - chr2_2:5782693-5782712 None:intergenic 30.0%
TGTATATCATGAATGTCTTG+TGG + chr2_2:5782780-5782799 Msa0233450:intron 30.0%
GTATATCATGAATGTCTTGT+GGG + chr2_2:5782781-5782800 Msa0233450:intron 30.0%
GGTTTCCATTTCATTGTTAA+CGG + chr2_2:5782852-5782871 Msa0233450:intron 30.0%
ATTCTCCGTTAACAATGAAA+TGG - chr2_2:5782860-5782879 None:intergenic 30.0%
TTCATTGTTAACGGAGAATA+AGG + chr2_2:5782861-5782880 Msa0233450:intron 30.0%
TCATTGTTAACGGAGAATAA+GGG + chr2_2:5782862-5782881 Msa0233450:intron 30.0%
!! AAGGAAACTTTTATTTCGCA+TGG - chr2_2:5782899-5782918 None:intergenic 30.0%
TCTATTCAGATTAACTGTCA+AGG - chr2_2:5782918-5782937 None:intergenic 30.0%
GCATATTTCTTTGCATAAAC+TGG - chr2_2:5782942-5782961 None:intergenic 30.0%
TAAGAAACTGAACTATGTTG+AGG + chr2_2:5782962-5782981 Msa0233450:intron 30.0%
! CTGGAATTCTTCTTTTCTTT+TGG + chr2_2:5782985-5783004 Msa0233450:intron 30.0%
!! ATTTCTAGCCAGTTTGTTTA+CGG + chr2_2:5783195-5783214 Msa0233450:intron 30.0%
TCAACAAACAAAAATAGGAG+AGG - chr2_2:5783223-5783242 None:intergenic 30.0%
CATTCAAAAGAGTAACTAAC+AGG - chr2_2:5783321-5783340 None:intergenic 30.0%
TTACAAACATTTGCTTGTCA+TGG - chr2_2:5783385-5783404 None:intergenic 30.0%
AAGCAAATGTTTGTAACTTC+TGG + chr2_2:5783389-5783408 Msa0233450:intron 30.0%
! TTTTCTTTTCCAATGATGAG+GGG - chr2_2:5783749-5783768 None:intergenic 30.0%
AAGAAAAATGAGGATTTGTC+TGG + chr2_2:5783762-5783781 Msa0233450:CDS 30.0%
GAAAAAGTAAACAGTTGAGA+AGG - chr2_2:5783860-5783879 None:intergenic 30.0%
!!! CTGTTTACTTTTTCAGTTAC+AGG + chr2_2:5783866-5783885 Msa0233450:intron 30.0%
!!! ACTTTTTCAGTTACAGGTTT+AGG + chr2_2:5783872-5783891 Msa0233450:intron 30.0%
TGTTGGCACATATTTAAACA+CGG - chr2_2:5783988-5784007 None:intergenic 30.0%
TAAGGTACAGATAAACCAAA+CGG - chr2_2:5784045-5784064 None:intergenic 30.0%
TTGACCATTTCTTTCATTTG+GGG - chr2_2:5784073-5784092 None:intergenic 30.0%
TGAAAGAAATGGTCAAATTG+GGG + chr2_2:5784077-5784096 Msa0233450:CDS 30.0%
!!! CTCAAAGTTTTTTGGAACAA+GGG - chr2_2:5784443-5784462 None:intergenic 30.0%
!!! ACTCAAAGTTTTTTGGAACA+AGG - chr2_2:5784444-5784463 None:intergenic 30.0%
ATCAGTGTACAAAAGTTACA+GGG - chr2_2:5784691-5784710 None:intergenic 30.0%
TATCAGTGTACAAAAGTTAC+AGG - chr2_2:5784692-5784711 None:intergenic 30.0%
ACTAATTTACATGCCAAACA+AGG - chr2_2:5784719-5784738 None:intergenic 30.0%
TTAGTGTATACTGTACAATG+TGG + chr2_2:5784734-5784753 Msa0233450:intron 30.0%
TTCAATAGATTGTAGAAACC+AGG + chr2_2:5784831-5784850 Msa0233450:intron 30.0%
! TTCTCATGTTGATGTTTTCT+TGG - chr2_2:5784928-5784947 None:intergenic 30.0%
TAAAGATAGACCATTTAGGT+GGG - chr2_2:5784969-5784988 None:intergenic 30.0%
AAGCTAAAGATAGACCATTT+AGG - chr2_2:5784973-5784992 None:intergenic 30.0%
! TTTAGCTTAATGTATGGTAG+AGG + chr2_2:5784985-5785004 Msa0233450:intron 30.0%
AATAACCTAGGAAGACTATT+TGG - chr2_2:5785093-5785112 None:intergenic 30.0%
ACAGAGATGATAAATAACCT+AGG - chr2_2:5785105-5785124 None:intergenic 30.0%
ATCTCTGTTAATCTGTCTTT+GGG + chr2_2:5785117-5785136 Msa0233450:intron 30.0%
ATTGTATTCTTGTGCATTGA+AGG + chr2_2:5785194-5785213 Msa0233450:intron 30.0%
!!! GTTGCATAATTTTTTTTGGG+GGG - chr2_2:5785247-5785266 None:intergenic 30.0%
TAAAGCATATGAACTTTGGT+GGG - chr2_2:5785305-5785324 None:intergenic 30.0%
TTAAAGCATATGAACTTTGG+TGG - chr2_2:5785306-5785325 None:intergenic 30.0%
TTGCATCACACTATATTTCA+AGG - chr2_2:5785404-5785423 None:intergenic 30.0%
!!! TATTATTTTGGATTGCTCTG+TGG + chr2_2:5785438-5785457 Msa0233450:intron 30.0%
! TACATTCTGCTGTTGTTATT+TGG - chr2_2:5785687-5785706 None:intergenic 30.0%
!! AGCAGAATGTATGTTTTAGA+GGG + chr2_2:5785696-5785715 Msa0233450:CDS 30.0%
ATAAATTTCCTTCATGCCAT+TGG - chr2_2:5785774-5785793 None:intergenic 30.0%
! TTAAGTTTTACTCAGAAGGA+AGG - chr2_2:5785826-5785845 None:intergenic 30.0%
! AAGCTTAAGTTTTACTCAGA+AGG - chr2_2:5785830-5785849 None:intergenic 30.0%
ATACCTACAATTCTAAACGA+GGG - chr2_2:5785886-5785905 None:intergenic 30.0%
TATACCTACAATTCTAAACG+AGG - chr2_2:5785887-5785906 None:intergenic 30.0%
! TCGTTTAGAATTGTAGGTAT+AGG + chr2_2:5785886-5785905 Msa0233450:intron 30.0%
! CGTTTAGAATTGTAGGTATA+GGG + chr2_2:5785887-5785906 Msa0233450:intron 30.0%
TTTAAAGACACAAGAAACAC+AGG - chr2_2:5786013-5786032 None:intergenic 30.0%
TTTAAAAAAGGACAACGAAC+AGG + chr2_2:5786027-5786046 Msa0233450:intron 30.0%
GATTATTTCGTTCCTTACAA+AGG - chr2_2:5786054-5786073 None:intergenic 30.0%
TATGCCTAGTATTAGAACTT+GGG - chr2_2:5786396-5786415 None:intergenic 30.0%
ATATGCCTAGTATTAGAACT+TGG - chr2_2:5786397-5786416 None:intergenic 30.0%
GATTCAACAAGGATTATTTG+AGG - chr2_2:5786468-5786487 None:intergenic 30.0%
GAGTTAATTGTCTTGTATTG+TGG + chr2_2:5786570-5786589 Msa0233450:intron 30.0%
TTGTTTGGATAGTTTATGCA+TGG + chr2_2:5786784-5786803 Msa0233450:intron 30.0%
! AGCTTTAACTGGAATTTATG+TGG + chr2_2:5786870-5786889 Msa0233450:intron 30.0%
GGATAGTTTATGCATGAAAT+TGG + chr2_2:5786891-5786910 Msa0233450:intron 30.0%
GTTAGAAACATGTACTGAAT+TGG + chr2_2:5786913-5786932 Msa0233450:intron 30.0%
! GTTATGCCCTTTTGTAATTT+CGG + chr2_2:5786976-5786995 Msa0233450:intron 30.0%
GATAATGAAGCTAATAAGAC+TGG + chr2_2:5787274-5787293 Msa0233450:CDS 30.0%
TAATAGAGCTGAAGATTACA+TGG + chr2_2:5787559-5787578 Msa0233450:CDS 30.0%
GACACGTTCTAATTATCATT+TGG - chr2_2:5787849-5787868 None:intergenic 30.0%
TTTCAACTAAGAACGCAAAA+TGG - chr2_2:5787896-5787915 None:intergenic 30.0%
! ACTATTTTGTTGAAGTCACT+TGG + chr2_2:5788145-5788164 Msa0233450:intron 30.0%
!! TAAAAGCATTCTCAGCATAA+AGG - chr2_2:5788272-5788291 None:intergenic 30.0%
! TAATAACGACCATGATGTTT+TGG + chr2_2:5788497-5788516 Msa0233450:intron 30.0%
CAATCAAATCCAAAACATCA+TGG - chr2_2:5788509-5788528 None:intergenic 30.0%
! TTAAGTTCTGATTTAGACTG+GGG + chr2_2:5788667-5788686 Msa0233450:intron 30.0%
!!! GTACTTTATTTTCCAGTGAA+AGG + chr2_2:5788733-5788752 Msa0233450:intron 30.0%
GACATGTTCAGATAATTCAT+GGG + chr2_2:5788830-5788849 Msa0233450:CDS 30.0%
! ACATGTAAAACAGATTGGTT+GGG + chr2_2:5788902-5788921 Msa0233450:intron 30.0%
AATAAGCATGGAATAAGTTG+AGG - chr2_2:5789033-5789052 None:intergenic 30.0%
ATTCAAACCTGAATTACAAG+GGG - chr2_2:5789198-5789217 None:intergenic 30.0%
CATTCAAACCTGAATTACAA+GGG - chr2_2:5789199-5789218 None:intergenic 30.0%
ATATTACATAGACCATGACA+AGG - chr2_2:5789257-5789276 None:intergenic 30.0%
CACATGTAATGTCTGTTTAA+CGG + chr2_2:5789551-5789570 Msa0233450:CDS 30.0%
TCAAGCAAAATTTCAGATGA+AGG - chr2_2:5789684-5789703 None:intergenic 30.0%
TCCTTGCATAATAGTAATAC+GGG + chr2_2:5789711-5789730 Msa0233450:CDS 30.0%
! AGATCAATTTGGCCTTTAAA+TGG - chr2_2:5789816-5789835 None:intergenic 30.0%
TGAACGTGTGAAATTCATAT+TGG + chr2_2:5790093-5790112 Msa0233450:exon 30.0%
!! TGAAATTCATATTGGTGCTA+GGG + chr2_2:5790101-5790120 Msa0233450:exon 30.0%
CATGTTTGTACATAAAAGAG+GGG + chr2_2:5790206-5790225 Msa0233450:three_prime_UTR 30.0%
! GTGAAAAAACCACTATTTTC+TGG + chr2_2:5790247-5790266 Msa0233450:three_prime_UTR 30.0%
ACATCATAGTGATTTACGTA+GGG + chr2_2:5790282-5790301 Msa0233450:three_prime_UTR 30.0%
! CATTTTCAATGTTGTTGATC+AGG - chr2_2:5790381-5790400 None:intergenic 30.0%
!! GTGAGAGAAATGGGTTTTAA+AGG - chr2_2:5780343-5780362 None:intergenic 35.0%
ATTCTGACTGTAAAGACTTG+AGG + chr2_2:5780563-5780582 Msa0233450:CDS 35.0%
TTGAGGTCTACTACTAAGAA+AGG + chr2_2:5780580-5780599 Msa0233450:CDS 35.0%
TGTATTAGTAGTTGTGTCTG+AGG + chr2_2:5780981-5781000 Msa0233450:intron 35.0%
GTATTAGTAGTTGTGTCTGA+GGG + chr2_2:5780982-5781001 Msa0233450:intron 35.0%
TATTAGTAGTTGTGTCTGAG+GGG + chr2_2:5780983-5781002 Msa0233450:intron 35.0%
! AGTAGTATTTTCTCGTTCAC+CGG - chr2_2:5781058-5781077 None:intergenic 35.0%
GTTTGAGTGTAGGAAATACT+AGG + chr2_2:5781142-5781161 Msa0233450:intron 35.0%
ACTGTTGAGATGTGAATGAT+TGG + chr2_2:5781236-5781255 Msa0233450:intron 35.0%
ATTGGTAAAGAGCCGAAAAA+AGG + chr2_2:5781254-5781273 Msa0233450:intron 35.0%
TTGGTAAAGAGCCGAAAAAA+GGG + chr2_2:5781255-5781274 Msa0233450:intron 35.0%
CAAACTGTTACAATTCATGG+GGG - chr2_2:5781372-5781391 None:intergenic 35.0%
! GAGCTTTATAAGCACTACTT+TGG + chr2_2:5781417-5781436 Msa0233450:intron 35.0%
TTCATTGAGTTTGGCTAGAA+GGG - chr2_2:5781463-5781482 None:intergenic 35.0%
TTCTAGCCAAACTCAATGAA+GGG + chr2_2:5781463-5781482 Msa0233450:intron 35.0%
CAAAACAGACTTGTAAAACG+AGG + chr2_2:5781586-5781605 Msa0233450:intron 35.0%
TAAGTAGTGCTTACAAAGCT+TGG - chr2_2:5781617-5781636 None:intergenic 35.0%
AATGGAACTATGTTGGGAAT+GGG - chr2_2:5781824-5781843 None:intergenic 35.0%
TAACCATACATAACTGCTCT+GGG - chr2_2:5781909-5781928 None:intergenic 35.0%
! TGTATTTGTTAACCTGCAGT+TGG + chr2_2:5782016-5782035 Msa0233450:intron 35.0%
TTGGTTACGTACAAACTGAA+TGG + chr2_2:5782035-5782054 Msa0233450:intron 35.0%
GATATCGCATAAGATCCTTA+AGG - chr2_2:5782064-5782083 None:intergenic 35.0%
CACAAATACTTACATGTGAC+TGG - chr2_2:5782273-5782292 None:intergenic 35.0%
!!! CTTAGTTCTGCTTTTGAAGA+AGG + chr2_2:5782389-5782408 Msa0233450:CDS 35.0%
GAATTGTGAGACTTGTAGAA+AGG + chr2_2:5782454-5782473 Msa0233450:CDS 35.0%
TCTAACATGGTAACATCAAC+AGG - chr2_2:5782511-5782530 None:intergenic 35.0%
AAGTAACACCTTTGTGTTGT+TGG + chr2_2:5782636-5782655 Msa0233450:CDS 35.0%
CGCAAAAATGTTATTCTGGT+AGG + chr2_2:5782691-5782710 Msa0233450:intron 35.0%
TGAGTTCATTTCACTCGAAA+TGG - chr2_2:5782829-5782848 None:intergenic 35.0%
TCGAGTGAAATGAACTCAAA+AGG + chr2_2:5782831-5782850 Msa0233450:intron 35.0%
CATTGTTAACGGAGAATAAG+GGG + chr2_2:5782863-5782882 Msa0233450:intron 35.0%
! ACCTTAACTTTGAAAGAGCA+GGG - chr2_2:5783096-5783115 None:intergenic 35.0%
! AACCTTAACTTTGAAAGAGC+AGG - chr2_2:5783097-5783116 None:intergenic 35.0%
AGGACAAATTCAATGCAAGA+CGG - chr2_2:5783155-5783174 None:intergenic 35.0%
! TTGTCCTTCTCTTTCCATTT+TGG + chr2_2:5783168-5783187 Msa0233450:intron 35.0%
GTAAACAAACTGGCTAGAAA+TGG - chr2_2:5783196-5783215 None:intergenic 35.0%
TTCTAAATATCAGTCCAGTC+TGG + chr2_2:5783252-5783271 Msa0233450:intron 35.0%
TCTAAATATCAGTCCAGTCT+GGG + chr2_2:5783253-5783272 Msa0233450:intron 35.0%
!! TGCATTTGTTATACCGCTAA+AGG + chr2_2:5783278-5783297 Msa0233450:intron 35.0%
! GGACAATTTTAGACCTTTAG+CGG - chr2_2:5783294-5783313 None:intergenic 35.0%
AAAGAGTAACTAACAGGGAA+AGG - chr2_2:5783315-5783334 None:intergenic 35.0%
ATGTGCTAAGAATGACAAAG+GGG - chr2_2:5783344-5783363 None:intergenic 35.0%
CATGTGCTAAGAATGACAAA+GGG - chr2_2:5783345-5783364 None:intergenic 35.0%
ACATGTGCTAAGAATGACAA+AGG - chr2_2:5783346-5783365 None:intergenic 35.0%
!! CAAAAGTGTTGCATCCAAAT+AGG - chr2_2:5783453-5783472 None:intergenic 35.0%
! CTATTTGGATGCAACACTTT+TGG + chr2_2:5783451-5783470 Msa0233450:intron 35.0%
! TTTCTTTTCCAATGATGAGG+GGG - chr2_2:5783748-5783767 None:intergenic 35.0%
! TGTCTGGAATATCAGCTAAT+TGG + chr2_2:5783778-5783797 Msa0233450:CDS 35.0%
AGCTAATTGGAATGTCAAAC+TGG + chr2_2:5783791-5783810 Msa0233450:CDS 35.0%
GCTAATTGGAATGTCAAACT+GGG + chr2_2:5783792-5783811 Msa0233450:CDS 35.0%
TTGCTTATGAACGGTAATAC+AGG + chr2_2:5783828-5783847 Msa0233450:CDS 35.0%
! TTTTCAGTTACAGGTTTAGG+AGG + chr2_2:5783875-5783894 Msa0233450:intron 35.0%
CTGCAATACAACAAAGAATC+CGG - chr2_2:5783939-5783958 None:intergenic 35.0%
! TTTGTTGTATTGCAGGAATG+AGG + chr2_2:5783944-5783963 Msa0233450:intron 35.0%
!! GAATCTTCCTTTAGAGTATG+AGG - chr2_2:5784012-5784031 None:intergenic 35.0%
CTTTCATTTGGGGATGAATA+AGG - chr2_2:5784063-5784082 None:intergenic 35.0%
TCATCCCCAAATGAAAGAAA+TGG + chr2_2:5784066-5784085 Msa0233450:CDS 35.0%
AGACATTGTACATTCCGATA+TGG - chr2_2:5784387-5784406 None:intergenic 35.0%
CAAATTAATAGCTAGCAGAG+AGG - chr2_2:5784535-5784554 None:intergenic 35.0%
!!! CAATGTGGTGTTAGTTTTTG+TGG + chr2_2:5784749-5784768 Msa0233450:intron 35.0%
! GTTTTTGTGGCAAGTTCTTA+TGG + chr2_2:5784762-5784781 Msa0233450:intron 35.0%
ATAGATTGTAGAAACCAGGA+AGG + chr2_2:5784835-5784854 Msa0233450:intron 35.0%
TAGATTGTAGAAACCAGGAA+GGG + chr2_2:5784836-5784855 Msa0233450:intron 35.0%
CTAAAGATAGACCATTTAGG+TGG - chr2_2:5784970-5784989 None:intergenic 35.0%
TATGACCAAATAGTCTTCCT+AGG + chr2_2:5785085-5785104 Msa0233450:intron 35.0%
CATCTCTGTTAATCTGTCTT+TGG + chr2_2:5785116-5785135 Msa0233450:intron 35.0%
TCTCTGTTAATCTGTCTTTG+GGG + chr2_2:5785118-5785137 Msa0233450:intron 35.0%
! TTTGCATCGAGGATTTTAAG+AGG - chr2_2:5785630-5785649 None:intergenic 35.0%
CTTAAAATCCTCGATGCAAA+AGG + chr2_2:5785630-5785649 Msa0233450:CDS 35.0%
!! CAGCAGAATGTATGTTTTAG+AGG + chr2_2:5785695-5785714 Msa0233450:CDS 35.0%
TAGAATTGTAGGTATAGGGT+TGG + chr2_2:5785891-5785910 Msa0233450:intron 35.0%
AATCGCCCTGAATATGTTAT+TGG + chr2_2:5785927-5785946 Msa0233450:intron 35.0%
ATCGCCCTGAATATGTTATT+GGG + chr2_2:5785928-5785947 Msa0233450:intron 35.0%
ACACCCCAATAACATATTCA+GGG - chr2_2:5785935-5785954 None:intergenic 35.0%
TACACCCCAATAACATATTC+AGG - chr2_2:5785936-5785955 None:intergenic 35.0%
GAACAACTCCAAAGTATGTA+GGG - chr2_2:5786116-5786135 None:intergenic 35.0%
TGAACAACTCCAAAGTATGT+AGG - chr2_2:5786117-5786136 None:intergenic 35.0%
GAAAACAGAAAACTTTCGGA+TGG - chr2_2:5786166-5786185 None:intergenic 35.0%
! ATAACTTGCCTGATAACACT+AGG + chr2_2:5786202-5786221 Msa0233450:intron 35.0%
! AAGCTTTATAAGCACCACAT+AGG - chr2_2:5786323-5786342 None:intergenic 35.0%
TATGTGGTGCTTATAAAGCT+TGG + chr2_2:5786322-5786341 Msa0233450:intron 35.0%
ATGTGGTGCTTATAAAGCTT+GGG + chr2_2:5786323-5786342 Msa0233450:intron 35.0%
CTAACTCAACCTTACAAAAC+TGG - chr2_2:5786367-5786386 None:intergenic 35.0%
!! CAGTTTTGTAAGGTTGAGTT+AGG + chr2_2:5786365-5786384 Msa0233450:intron 35.0%
CTAGTATTAGAACTTGGGTT+GGG - chr2_2:5786391-5786410 None:intergenic 35.0%
! ATGTTTGTTACAGTGCTTCT+AGG + chr2_2:5786421-5786440 Msa0233450:intron 35.0%
ACAACTAATCAACCACAACA+AGG - chr2_2:5786550-5786569 None:intergenic 35.0%
! TTTTCGCAGTAACATTTAGC+CGG + chr2_2:5786607-5786626 Msa0233450:intron 35.0%
GTTGGTTATGGGATTTAGAA+AGG + chr2_2:5786647-5786666 Msa0233450:CDS 35.0%
CAATGCAGATATTACCTGAT+CGG - chr2_2:5786691-5786710 None:intergenic 35.0%
ATCTGCATTGTCTAATTGTC+TGG + chr2_2:5786701-5786720 Msa0233450:intron 35.0%
TCTGCATTGTCTAATTGTCT+GGG + chr2_2:5786702-5786721 Msa0233450:intron 35.0%
GTGTACATTGTATGGTTGAA+TGG + chr2_2:5786742-5786761 Msa0233450:intron 35.0%
TGAATGGAACTAACTTCAAC+TGG + chr2_2:5786758-5786777 Msa0233450:intron 35.0%
! AACTTCAACTGGAACTTGTT+TGG + chr2_2:5786769-5786788 Msa0233450:intron 35.0%
GGATAGTTTATGCATGGAAT+TGG + chr2_2:5786790-5786809 Msa0233450:intron 35.0%
GAAACGTGTACTAAATCGTA+TGG + chr2_2:5786816-5786835 Msa0233450:intron 35.0%
ATGGTTGAGTGTAGATTGTA+TGG + chr2_2:5786835-5786854 Msa0233450:intron 35.0%
TTGAGTGTAGATTGTATGGT+TGG + chr2_2:5786839-5786858 Msa0233450:intron 35.0%
GAAGCTAATAAGACTGGAAA+CGG + chr2_2:5787280-5787299 Msa0233450:CDS 35.0%
! TGTCATTTAAGTCTCATACC+TGG + chr2_2:5787358-5787377 Msa0233450:intron 35.0%
TGACTTATCAACATTTGACC+AGG - chr2_2:5787430-5787449 None:intergenic 35.0%
! TGGTCAAATGTTGATAAGTC+AGG + chr2_2:5787429-5787448 Msa0233450:CDS 35.0%
! ATACATAGCAAAAGAAGCAC+TGG + chr2_2:5787452-5787471 Msa0233450:CDS 35.0%
!! TACATAGCAAAAGAAGCACT+GGG + chr2_2:5787453-5787472 Msa0233450:CDS 35.0%
! CTTTGAGTTTGAGGAATATG+AGG + chr2_2:5787647-5787666 Msa0233450:CDS 35.0%
CTGAAACAAAGCAAGAGAAA+TGG - chr2_2:5787675-5787694 None:intergenic 35.0%
!! CTCTTGCTTTGTTTCAGAAA+TGG + chr2_2:5787678-5787697 Msa0233450:intron 35.0%
!! GTTTGTTATGTCTGTGACTT+AGG - chr2_2:5787970-5787989 None:intergenic 35.0%
AAGTCACAGACATAACAAAC+AGG + chr2_2:5787970-5787989 Msa0233450:intron 35.0%
AGTCACAGACATAACAAACA+GGG + chr2_2:5787971-5787990 Msa0233450:intron 35.0%
ACAGGGAATTAAAGTGATGA+AGG + chr2_2:5787988-5788007 Msa0233450:intron 35.0%
CATCACAAATGATCTTCAAC+TGG + chr2_2:5788033-5788052 Msa0233450:intron 35.0%
!!! TCTTCAACTGGTTTTAGTTG+AGG + chr2_2:5788045-5788064 Msa0233450:intron 35.0%
TAGTATCTATGTTCACAGAC+AGG - chr2_2:5788129-5788148 None:intergenic 35.0%
! TCACTTGGCTCTTCTTATAT+TGG + chr2_2:5788160-5788179 Msa0233450:intron 35.0%
GTCTGTGTTGTAATCTTTCT+TGG + chr2_2:5788197-5788216 Msa0233450:intron 35.0%
ATGAGAATTGCTATGCATTG+TGG + chr2_2:5788243-5788262 Msa0233450:intron 35.0%
! TATGCTGAGAATGCTTTTAC+AGG + chr2_2:5788273-5788292 Msa0233450:intron 35.0%
ACTCAACAACAATAGTCAAC+AGG - chr2_2:5788461-5788480 None:intergenic 35.0%
TATTGCTGTGCATGTTTATC+AGG + chr2_2:5788593-5788612 Msa0233450:intron 35.0%
! TAAGTTCTGATTTAGACTGG+GGG + chr2_2:5788668-5788687 Msa0233450:intron 35.0%
AGTATACTGAATCCTTTCAC+TGG - chr2_2:5788748-5788767 None:intergenic 35.0%
AATGTGAACATTGTCTGAAG+TGG + chr2_2:5788769-5788788 Msa0233450:CDS 35.0%
GGACATGTTCAGATAATTCA+TGG + chr2_2:5788829-5788848 Msa0233450:CDS 35.0%
ATAATTCATGGGATCCAGAA+AGG + chr2_2:5788841-5788860 Msa0233450:CDS 35.0%
AGGATGTGTTAACAAGTGAA+TGG - chr2_2:5788879-5788898 None:intergenic 35.0%
! CAATCTGTTTTACATGTGGA+AGG - chr2_2:5788899-5788918 None:intergenic 35.0%
CTTCCACATGTAAAACAGAT+TGG + chr2_2:5788897-5788916 Msa0233450:intron 35.0%
! CAACCAATCTGTTTTACATG+TGG - chr2_2:5788903-5788922 None:intergenic 35.0%
CACATGTAAAACAGATTGGT+TGG + chr2_2:5788901-5788920 Msa0233450:intron 35.0%
TTCAAACCTGAATTACAAGG+GGG - chr2_2:5789197-5789216 None:intergenic 35.0%
CCATTCAAACCTGAATTACA+AGG - chr2_2:5789200-5789219 None:intergenic 35.0%
! CCTTGTAATTCAGGTTTGAA+TGG + chr2_2:5789197-5789216 Msa0233450:intron 35.0%
AGCAGTTTCCAAGAAAATGA+AGG + chr2_2:5789332-5789351 Msa0233450:intron 35.0%
ACCCGTATTACTATTATGCA+AGG - chr2_2:5789715-5789734 None:intergenic 35.0%
GCTGGATATTGAGATCAATT+TGG - chr2_2:5789827-5789846 None:intergenic 35.0%
CAGTAGTCATAATGCTGATA+AGG + chr2_2:5790049-5790068 Msa0233450:CDS 35.0%
! GTGAAATTCATATTGGTGCT+AGG + chr2_2:5790100-5790119 Msa0233450:exon 35.0%
!! GAAATTCATATTGGTGCTAG+GGG + chr2_2:5790102-5790121 Msa0233450:exon 35.0%
TTTGTACATAAAAGAGGGGT+AGG + chr2_2:5790210-5790229 Msa0233450:three_prime_UTR 35.0%
ATAAAAGAGGGGTAGGAAAA+AGG + chr2_2:5790217-5790236 Msa0233450:three_prime_UTR 35.0%
TAAAAGAGGGGTAGGAAAAA+GGG + chr2_2:5790218-5790237 Msa0233450:three_prime_UTR 35.0%
CTTGTGTTACCAGAAAATAG+TGG - chr2_2:5790259-5790278 None:intergenic 35.0%
!! CTATTTTCTGGTAACACAAG+TGG + chr2_2:5790259-5790278 Msa0233450:three_prime_UTR 35.0%
GACATCATAGTGATTTACGT+AGG + chr2_2:5790281-5790300 Msa0233450:three_prime_UTR 35.0%
TGATTTACGTAGGGAAATCA+TGG + chr2_2:5790291-5790310 Msa0233450:three_prime_UTR 35.0%
TTTCAATGTTGTTGATCAGG+TGG - chr2_2:5790378-5790397 None:intergenic 35.0%
ACAACGACGAATGAAAGAGA+GGG - chr2_2:5780417-5780436 None:intergenic 40.0%
AACAACGACGAATGAAAGAG+AGG - chr2_2:5780418-5780437 None:intergenic 40.0%
CATAGCAGTAGTAGTAACCA+TGG + chr2_2:5780468-5780487 Msa0233450:exon 40.0%
AACTGAAGAAGAAGAAGCCA+TGG - chr2_2:5780488-5780507 None:intergenic 40.0%
GTCGAAGAAGAAGAAGAAGA+TGG - chr2_2:5780511-5780530 None:intergenic 40.0%
GGTCTACTACTAAGAAAGGT+TGG + chr2_2:5780584-5780603 Msa0233450:CDS 40.0%
ATTAGTAGTTGTGTCTGAGG+GGG + chr2_2:5780984-5781003 Msa0233450:intron 40.0%
TGTAGGAAATACTAGGCATG+TGG + chr2_2:5781149-5781168 Msa0233450:intron 40.0%
TAAGCACTACTTTGGCAATG+TGG + chr2_2:5781425-5781444 Msa0233450:intron 40.0%
AAGCACTACTTTGGCAATGT+GGG + chr2_2:5781426-5781445 Msa0233450:intron 40.0%
TCATTGAGTTTGGCTAGAAG+GGG - chr2_2:5781462-5781481 None:intergenic 40.0%
CTTCATTGAGTTTGGCTAGA+AGG - chr2_2:5781464-5781483 None:intergenic 40.0%
CTTCTAGCCAAACTCAATGA+AGG + chr2_2:5781462-5781481 Msa0233450:intron 40.0%
AGCTATATCTCTAGGCAATG+TGG + chr2_2:5781637-5781656 Msa0233450:intron 40.0%
GCTATATCTCTAGGCAATGT+GGG + chr2_2:5781638-5781657 Msa0233450:intron 40.0%
TCTAGCACCTTCATTGTGTT+GGG - chr2_2:5781684-5781703 None:intergenic 40.0%
GAATGGAACTATGTTGGGAA+TGG - chr2_2:5781825-5781844 None:intergenic 40.0%
ATCATAACCAGAACTCCAGA+AGG - chr2_2:5781857-5781876 None:intergenic 40.0%
!! TTCTGGAGTTCTGGTTATGA+TGG + chr2_2:5781856-5781875 Msa0233450:intron 40.0%
CTAACCATACATAACTGCTC+TGG - chr2_2:5781910-5781929 None:intergenic 40.0%
! CAAACTGAATGGACTCCTTA+AGG + chr2_2:5782046-5782065 Msa0233450:intron 40.0%
! ATTTTCCACTCAAACGCTTC+TGG + chr2_2:5782425-5782444 Msa0233450:CDS 40.0%
! TTTTTGCAGCGAATTCACTG+TGG + chr2_2:5782601-5782620 Msa0233450:intron 40.0%
! TTTTGCAGCGAATTCACTGT+GGG + chr2_2:5782602-5782621 Msa0233450:intron 40.0%
! GTAAAGCATTCAATTCCTCC+TGG - chr2_2:5782664-5782683 None:intergenic 40.0%
TGCCCGCAAAAATGTTATTC+TGG + chr2_2:5782687-5782706 Msa0233450:CDS 40.0%
TCACTCGAAATGGAGGAAAT+GGG - chr2_2:5782819-5782838 None:intergenic 40.0%
TTCACTCGAAATGGAGGAAA+TGG - chr2_2:5782820-5782839 None:intergenic 40.0%
GTTCATTTCACTCGAAATGG+AGG - chr2_2:5782826-5782845 None:intergenic 40.0%
AAACTGAACTATGTTGAGGC+TGG + chr2_2:5782966-5782985 Msa0233450:intron 40.0%
TCCCTGCTCTTTCAAAGTTA+AGG + chr2_2:5783092-5783111 Msa0233450:intron 40.0%
TAACAAATGCAAACCCAGAC+TGG - chr2_2:5783269-5783288 None:intergenic 40.0%
AGAGATAAAGATTGTGGCCA+CGG - chr2_2:5783528-5783547 None:intergenic 40.0%
GAGAGATATAGAGACATGTC+TGG + chr2_2:5783564-5783583 Msa0233450:CDS 40.0%
AAAAGTTGGAGTCAGTTAGC+TGG + chr2_2:5783588-5783607 Msa0233450:CDS 40.0%
GAAGCTGAATTGAACAGACT+GGG - chr2_2:5783642-5783661 None:intergenic 40.0%
AGAAGCTGAATTGAACAGAC+TGG - chr2_2:5783643-5783662 None:intergenic 40.0%
TCAACTAGAGAATGCACATC+TGG - chr2_2:5783681-5783700 None:intergenic 40.0%
! TTCTTTTCCAATGATGAGGG+GGG - chr2_2:5783747-5783766 None:intergenic 40.0%
GAATGTCAAACTGGGTTCAA+GGG + chr2_2:5783800-5783819 Msa0233450:CDS 40.0%
! AGGGACATGTTGCTTATGAA+CGG + chr2_2:5783819-5783838 Msa0233450:CDS 40.0%
! CGGATTCTTTGTTGTATTGC+AGG + chr2_2:5783937-5783956 Msa0233450:intron 40.0%
TATTGCAGGAATGAGGAATG+AGG + chr2_2:5783951-5783970 Msa0233450:intron 40.0%
ATGAGGAATGAGGACAAATC+AGG + chr2_2:5783961-5783980 Msa0233450:CDS 40.0%
GATTCATCTTCTCAACCGTT+TGG + chr2_2:5784027-5784046 Msa0233450:CDS 40.0%
AATGGTCAAATTGGGGTAAC+TGG + chr2_2:5784084-5784103 Msa0233450:CDS 40.0%
CATTTACCTCTTGACTCATC+AGG + chr2_2:5784162-5784181 Msa0233450:CDS 40.0%
!!! CACTGGCACTCAAAGTTTTT+TGG - chr2_2:5784451-5784470 None:intergenic 40.0%
ACTACCCAAAAAATGTGCTG+AGG + chr2_2:5784496-5784515 Msa0233450:CDS 40.0%
!!! CCAACCTCAGCACATTTTTT+GGG - chr2_2:5784503-5784522 None:intergenic 40.0%
!!! ACCAACCTCAGCACATTTTT+TGG - chr2_2:5784504-5784523 None:intergenic 40.0%
GCAAGAGATTTATGACATGC+AGG - chr2_2:5784662-5784681 None:intergenic 40.0%
ACACTGATAAGCTCCTTGTT+TGG + chr2_2:5784703-5784722 Msa0233450:intron 40.0%
! TAATGCAGTTTTACCCTTCC+TGG - chr2_2:5784852-5784871 None:intergenic 40.0%
TTAGCCAATTCCCACCTAAA+TGG + chr2_2:5784956-5784975 Msa0233450:intron 40.0%
TAGACCATTTAGGTGGGAAT+TGG - chr2_2:5784963-5784982 None:intergenic 40.0%
GGGGATTCCTTATACTGATA+CGG + chr2_2:5785137-5785156 Msa0233450:intron 40.0%
TCCTTATACTGATACGGTCT+TGG + chr2_2:5785143-5785162 Msa0233450:intron 40.0%
TCCAAGACCGTATCAGTATA+AGG - chr2_2:5785147-5785166 None:intergenic 40.0%
TGGATTTGTGGGATTACTTC+TGG + chr2_2:5785458-5785477 Msa0233450:intron 40.0%
GGATTTGTGGGATTACTTCT+GGG + chr2_2:5785459-5785478 Msa0233450:intron 40.0%
AATCCTCGATGCAAAAGGAA+AGG + chr2_2:5785635-5785654 Msa0233450:CDS 40.0%
! ATTCCTTTCCTTTTGCATCG+AGG - chr2_2:5785641-5785660 None:intergenic 40.0%
TCGATGCAAAAGGAAAGGAA+TGG + chr2_2:5785640-5785659 Msa0233450:CDS 40.0%
!! TGTTGTTATTTGGCCAGAAG+CGG - chr2_2:5785677-5785696 None:intergenic 40.0%
! CTTAATGGGTCAGATATGCA+CGG + chr2_2:5785847-5785866 Msa0233450:intron 40.0%
TCGCCCTGAATATGTTATTG+GGG + chr2_2:5785929-5785948 Msa0233450:intron 40.0%
TTCCAACACCTAGTGTTATC+AGG - chr2_2:5786213-5786232 None:intergenic 40.0%
CAACCTAAATGCCAGCAATT+AGG - chr2_2:5786268-5786287 None:intergenic 40.0%
!! AAAACTGGCTTGTAAGGTGA+GGG - chr2_2:5786352-5786371 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG - chr2_2:5786358-5786377 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG + chr2_2:5786355-5786374 Msa0233450:intron 40.0%
CCTAGTATTAGAACTTGGGT+TGG - chr2_2:5786392-5786411 None:intergenic 40.0%
! CCAACCCAAGTTCTAATACT+AGG + chr2_2:5786389-5786408 Msa0233450:intron 40.0%
TCCTTGTTGAATCCTTGTCT+TGG + chr2_2:5786475-5786494 Msa0233450:intron 40.0%
CCTTGTTGAATCCTTGTCTT+GGG + chr2_2:5786476-5786495 Msa0233450:intron 40.0%
!! ACATAAAAGCACCCAAGACA+AGG - chr2_2:5786490-5786509 None:intergenic 40.0%
GGTACAACACAGGATACAAT+GGG - chr2_2:5786523-5786542 None:intergenic 40.0%
TGGTACAACACAGGATACAA+TGG - chr2_2:5786524-5786543 None:intergenic 40.0%
AATCAACCACAACAAGGTTG+TGG - chr2_2:5786544-5786563 None:intergenic 40.0%
GTTACTGCGAAAATCAGTTC+AGG - chr2_2:5786600-5786619 None:intergenic 40.0%
GTGTAGATTGTATGGTTGGA+TGG + chr2_2:5786843-5786862 Msa0233450:intron 40.0%
!! TGGATGGAACTAGCTTTAAC+TGG + chr2_2:5786859-5786878 Msa0233450:intron 40.0%
GACAGATGAAAAATGCAACC+AGG - chr2_2:5787379-5787398 None:intergenic 40.0%
!! GCATTTTTCATCTGTCGCTT+AGG + chr2_2:5787383-5787402 Msa0233450:intron 40.0%
!! ATCTGTCGCTTAGGTTGAAT+TGG + chr2_2:5787392-5787411 Msa0233450:intron 40.0%
TCAACATTTGACCAGGAACT+AGG - chr2_2:5787423-5787442 None:intergenic 40.0%
!! ACATAGCAAAAGAAGCACTG+GGG + chr2_2:5787454-5787473 Msa0233450:CDS 40.0%
ATTACATGGCAAGAAGCTCA+AGG + chr2_2:5787573-5787592 Msa0233450:CDS 40.0%
ACAATGCTTGGGACATGATT+AGG - chr2_2:5787615-5787634 None:intergenic 40.0%
! TAATCATGTCCCAAGCATTG+TGG + chr2_2:5787614-5787633 Msa0233450:CDS 40.0%
CTTCAATCACCACAATGCTT+GGG - chr2_2:5787626-5787645 None:intergenic 40.0%
!! GATTGAAGGCTTTGAGTTTG+AGG + chr2_2:5787638-5787657 Msa0233450:CDS 40.0%
GAACTATATCACCTGCATCA+TGG - chr2_2:5787871-5787890 None:intergenic 40.0%
! AATGCTTTTACAGGATGCTC+CGG + chr2_2:5788282-5788301 Msa0233450:intron 40.0%
! AAAAGTCAATGCTAGTCTCC+AGG - chr2_2:5788546-5788565 None:intergenic 40.0%
! TCTGAACATGTCCATTTTGC+TGG - chr2_2:5788822-5788841 None:intergenic 40.0%
! TGGAATAAGTTGAGGAAGAC+TGG - chr2_2:5789025-5789044 None:intergenic 40.0%
GTGCTTTGTGCAAATAAGCA+TGG - chr2_2:5789045-5789064 None:intergenic 40.0%
TTGTTACCCCCTTGTAATTC+AGG + chr2_2:5789188-5789207 Msa0233450:CDS 40.0%
ATGTCTCAGATTCCTTGTCA+TGG + chr2_2:5789242-5789261 Msa0233450:intron 40.0%
! CTTAGTGGCCTTCATTTTCT+TGG - chr2_2:5789343-5789362 None:intergenic 40.0%
ACTTGCAAATCTAGCAATCC+TGG + chr2_2:5789404-5789423 Msa0233450:CDS 40.0%
CTTGCAAATCTAGCAATCCT+GGG + chr2_2:5789405-5789424 Msa0233450:CDS 40.0%
TTGCAAATCTAGCAATCCTG+GGG + chr2_2:5789406-5789425 Msa0233450:CDS 40.0%
GTTTCCGTACCCTTATGTTA+CGG + chr2_2:5789583-5789602 Msa0233450:CDS 40.0%
ATCATTACCCTCCTTGTTCA+TGG - chr2_2:5789751-5789770 None:intergenic 40.0%
ATGAACAAGGAGGGTAATGA+TGG + chr2_2:5789750-5789769 Msa0233450:CDS 40.0%
! GAGACACGGATGATTTTATC+CGG - chr2_2:5789794-5789813 None:intergenic 40.0%
TCATCCGTGTCTCCATTTAA+AGG + chr2_2:5789801-5789820 Msa0233450:CDS 40.0%
! TTGGCCTTTAAATGGAGACA+CGG - chr2_2:5789808-5789827 None:intergenic 40.0%
ACTTTGTTGAACTCTGGTAC+TGG + chr2_2:5789945-5789964 Msa0233450:CDS 40.0%
!! CTTAGCAACGGTGTTATTCA+TGG + chr2_2:5790023-5790042 Msa0233450:CDS 40.0%
CACGTTCATAGACAAAGACT+GGG - chr2_2:5790081-5790100 None:intergenic 40.0%
ACACGTTCATAGACAAAGAC+TGG - chr2_2:5790082-5790101 None:intergenic 40.0%
!! TCTTGCAAAGCTTGTTGAAG+TGG + chr2_2:5790138-5790157 Msa0233450:three_prime_UTR 40.0%
!! CTTGCAAAGCTTGTTGAAGT+GGG + chr2_2:5790139-5790158 Msa0233450:three_prime_UTR 40.0%
!! TTGCAAAGCTTGTTGAAGTG+GGG + chr2_2:5790140-5790159 Msa0233450:three_prime_UTR 40.0%
TCCGTAGTTCATATCCACTT+CGG + chr2_2:5790171-5790190 Msa0233450:three_prime_UTR 40.0%
AAAAGAGGGGTAGGAAAAAG+GGG + chr2_2:5790219-5790238 Msa0233450:three_prime_UTR 40.0%
TACGTAGGGAAATCATGGAA+TGG + chr2_2:5790296-5790315 Msa0233450:three_prime_UTR 40.0%
ATGTTGTTGATCAGGTGGTA+CGG - chr2_2:5790373-5790392 None:intergenic 40.0%
ATCGATCACAGAGTTGAGCT+AGG - chr2_2:5780627-5780646 None:intergenic 45.0%
ATTTCCGACCAAGTTACACG+TGG + chr2_2:5780764-5780783 Msa0233450:intron 45.0%
! TGGCGTTTGGTTTCATGGTT+TGG + chr2_2:5780784-5780803 Msa0233450:intron 45.0%
! GGCGTTTGGTTTCATGGTTT+GGG + chr2_2:5780785-5780804 Msa0233450:intron 45.0%
AGGAAATACTAGGCATGTGG+TGG + chr2_2:5781152-5781171 Msa0233450:intron 45.0%
TGGCACAATCGTGTACGTAA+TGG + chr2_2:5781172-5781191 Msa0233450:intron 45.0%
GTTACAATTCATGGGGGTCA+GGG - chr2_2:5781366-5781385 None:intergenic 45.0%
TGTTACAATTCATGGGGGTC+AGG - chr2_2:5781367-5781386 None:intergenic 45.0%
CTCTAGCACCTTCATTGTGT+TGG - chr2_2:5781685-5781704 None:intergenic 45.0%
!! CAACACAATGAAGGTGCTAG+AGG + chr2_2:5781683-5781702 Msa0233450:intron 45.0%
! GCTGGAAAGTGTACTCTGTT+GGG - chr2_2:5781776-5781795 None:intergenic 45.0%
CCAGAAGGCCAGATAATGAA+TGG - chr2_2:5781842-5781861 None:intergenic 45.0%
! CCATTCATTATCTGGCCTTC+TGG + chr2_2:5781839-5781858 Msa0233450:intron 45.0%
CATCCCAGAGCAGTTATGTA+TGG + chr2_2:5781903-5781922 Msa0233450:intron 45.0%
GTTTGTACGTAACCAACTGC+AGG - chr2_2:5782031-5782050 None:intergenic 45.0%
! ACCTTTGTGTTGTTGGATCC+AGG + chr2_2:5782643-5782662 Msa0233450:CDS 45.0%
TCCTGGATCCAACAACACAA+AGG - chr2_2:5782647-5782666 None:intergenic 45.0%
! TTTGTGTTGTTGGATCCAGG+AGG + chr2_2:5782646-5782665 Msa0233450:CDS 45.0%
TAGGTTTCTCTATCGCTGTG+AGG + chr2_2:5782710-5782729 Msa0233450:intron 45.0%
ACTCAAGCCCAAACAGGATA+GGG - chr2_2:5782750-5782769 None:intergenic 45.0%
ATGATGACTCAAGCCCAAAC+AGG - chr2_2:5782756-5782775 None:intergenic 45.0%
ACTCGAAATGGAGGAAATGG+GGG - chr2_2:5782817-5782836 None:intergenic 45.0%
CACTCGAAATGGAGGAAATG+GGG - chr2_2:5782818-5782837 None:intergenic 45.0%
GGAGCCAAAATGGAAAGAGA+AGG - chr2_2:5783175-5783194 None:intergenic 45.0%
GGCTAGAAATGGAGCCAAAA+TGG - chr2_2:5783185-5783204 None:intergenic 45.0%
GAGACATGTCTGGCAAAAGT+TGG + chr2_2:5783574-5783593 Msa0233450:CDS 45.0%
ACTAGAGAATGCACATCTGG+AGG - chr2_2:5783678-5783697 None:intergenic 45.0%
GGAATGTCAAACTGGGTTCA+AGG + chr2_2:5783799-5783818 Msa0233450:CDS 45.0%
CATGGAGATGGCTACATAAC+CGG + chr2_2:5783917-5783936 Msa0233450:intron 45.0%
!! CCTTTAGAGTATGAGGCTGT+TGG - chr2_2:5784005-5784024 None:intergenic 45.0%
CCAACAGCCTCATACTCTAA+AGG + chr2_2:5784002-5784021 Msa0233450:CDS 45.0%
CAACAAACTCCACCTCATCT+AGG + chr2_2:5784117-5784136 Msa0233450:CDS 45.0%
CTAAACTGCTTGCCTAGATG+AGG - chr2_2:5784132-5784151 None:intergenic 45.0%
CATCTAGGCAAGCAGTTTAG+TGG + chr2_2:5784132-5784151 Msa0233450:CDS 45.0%
! CAACAACTGACTTCTTCCTC+GGG - chr2_2:5784226-5784245 None:intergenic 45.0%
! GCAACAACTGACTTCTTCCT+CGG - chr2_2:5784227-5784246 None:intergenic 45.0%
GAAGAAGTCAGTTGTTGCCA+CGG + chr2_2:5784229-5784248 Msa0233450:CDS 45.0%
AGCTCCAATTCAGTACACCT+GGG - chr2_2:5784261-5784280 None:intergenic 45.0%
TAGCTCCAATTCAGTACACC+TGG - chr2_2:5784262-5784281 None:intergenic 45.0%
CCCAAAAAATGTGCTGAGGT+TGG + chr2_2:5784500-5784519 Msa0233450:intron 45.0%
! TGTCTGCCTTTTGTAATGCC+TGG + chr2_2:5784636-5784655 Msa0233450:intron 45.0%
AGATTTATGACATGCAGGCC+AGG - chr2_2:5784657-5784676 None:intergenic 45.0%
ATCAGGAAGATTGTCTTCCC+TGG + chr2_2:5784877-5784896 Msa0233450:intron 45.0%
TTCTACTCTCTGTTGCTCCA+GGG - chr2_2:5784897-5784916 None:intergenic 45.0%
TTTCTACTCTCTGTTGCTCC+AGG - chr2_2:5784898-5784917 None:intergenic 45.0%
ACTAGGTGGAGTTGGCTATA+TGG - chr2_2:5785029-5785048 None:intergenic 45.0%
CTTATCTCACTAGGTGGAGT+TGG - chr2_2:5785037-5785056 None:intergenic 45.0%
CAACTCCACCTAGTGAGATA+AGG + chr2_2:5785035-5785054 Msa0233450:intron 45.0%
TGGATTGCTCTGTGGATTTG+TGG + chr2_2:5785446-5785465 Msa0233450:intron 45.0%
GGATTGCTCTGTGGATTTGT+GGG + chr2_2:5785447-5785466 Msa0233450:intron 45.0%
CTGAGAAATTGGTGGGAAGT+AGG - chr2_2:5785595-5785614 None:intergenic 45.0%
CTTCAGGCTGAGAAATTGGT+GGG - chr2_2:5785602-5785621 None:intergenic 45.0%
GGATATTTCAGTTCCGCTTC+TGG + chr2_2:5785661-5785680 Msa0233450:CDS 45.0%
! AACTGCATGGACTGTATGCA+CGG - chr2_2:5785729-5785748 None:intergenic 45.0%
AATTCTAAACGAGGGCCAGA+AGG - chr2_2:5785878-5785897 None:intergenic 45.0%
! TGGCCCTCGTTTAGAATTGT+AGG + chr2_2:5785880-5785899 Msa0233450:intron 45.0%
!! CACAGATATGCTTCTAGAGC+AGG - chr2_2:5785979-5785998 None:intergenic 45.0%
TGGCATCTCCCTACATACTT+TGG + chr2_2:5786105-5786124 Msa0233450:intron 45.0%
TGCCTGATAACACTAGGTGT+TGG + chr2_2:5786208-5786227 Msa0233450:intron 45.0%
TGGAATTTCCGCCTTCATTG+CGG + chr2_2:5786228-5786247 Msa0233450:intron 45.0%
CCTAAATGCCAGCAATTAGG+CGG - chr2_2:5786265-5786284 None:intergenic 45.0%
CATAGGTCATTACGTAGTGC+TGG - chr2_2:5786306-5786325 None:intergenic 45.0%
GCACTACGTAATGACCTATG+TGG + chr2_2:5786306-5786325 Msa0233450:intron 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - chr2_2:5786353-5786372 None:intergenic 45.0%
CCCAAGACAAGGATTCAACA+AGG - chr2_2:5786479-5786498 None:intergenic 45.0%
AACACAGGATACAATGGGAG+GGG - chr2_2:5786518-5786537 None:intergenic 45.0%
CAACACAGGATACAATGGGA+GGG - chr2_2:5786519-5786538 None:intergenic 45.0%
ACAACACAGGATACAATGGG+AGG - chr2_2:5786520-5786539 None:intergenic 45.0%
ACAAGGTTGTGGTACAACAC+AGG - chr2_2:5786533-5786552 None:intergenic 45.0%
GTTGTACCACAACCTTGTTG+TGG + chr2_2:5786535-5786554 Msa0233450:intron 45.0%
AAATCCTTTGCCATCCGATC+AGG + chr2_2:5786674-5786693 Msa0233450:CDS 45.0%
ATTACCTGATCGGATGGCAA+AGG - chr2_2:5786681-5786700 None:intergenic 45.0%
GCAGATATTACCTGATCGGA+TGG - chr2_2:5786687-5786706 None:intergenic 45.0%
GGGTTCAGCTCAGGTTAATA+TGG + chr2_2:5787022-5787041 Msa0233450:intron 45.0%
AATTGGCTGATCCTAGTTCC+TGG + chr2_2:5787409-5787428 Msa0233450:CDS 45.0%
TGCTTGGGACATGATTAGGA+GGG - chr2_2:5787611-5787630 None:intergenic 45.0%
ATGCTTGGGACATGATTAGG+AGG - chr2_2:5787612-5787631 None:intergenic 45.0%
CCTTCAATCACCACAATGCT+TGG - chr2_2:5787627-5787646 None:intergenic 45.0%
! CCAAGCATTGTGGTGATTGA+AGG + chr2_2:5787624-5787643 Msa0233450:CDS 45.0%
TTAGAACGTGTCCATGATGC+AGG + chr2_2:5787857-5787876 Msa0233450:intron 45.0%
TATGTTCACAGACAGGCTAC+AGG - chr2_2:5788122-5788141 None:intergenic 45.0%
! ATTGTGTTGTTGCTCTCACC+TGG + chr2_2:5788525-5788544 Msa0233450:intron 45.0%
GTGCACTTCTTCCAGCAAAA+TGG + chr2_2:5788808-5788827 Msa0233450:CDS 45.0%
GACTGACATGAAGCATGGTA+TGG - chr2_2:5788974-5788993 None:intergenic 45.0%
TACCATGCTTCATGTCAGTC+AGG + chr2_2:5788974-5788993 Msa0233450:intron 45.0%
ATCCTGACTGACATGAAGCA+TGG - chr2_2:5788979-5788998 None:intergenic 45.0%
AAGAAGATCTGGCAGCAAAG+AGG - chr2_2:5789127-5789146 None:intergenic 45.0%
TGCAGCTGAACAAGAAGATC+TGG - chr2_2:5789138-5789157 None:intergenic 45.0%
GAAAATGAAGGCCACTAAGC+AGG + chr2_2:5789344-5789363 Msa0233450:CDS 45.0%
ATGATCAGGATCCTGCTTAG+TGG - chr2_2:5789358-5789377 None:intergenic 45.0%
TCCTGATCATGCTGAAGCTT+TGG + chr2_2:5789368-5789387 Msa0233450:CDS 45.0%
TCCAAAGCTTCAGCATGATC+AGG - chr2_2:5789372-5789391 None:intergenic 45.0%
! TGATCATGCTGAAGCTTTGG+AGG + chr2_2:5789371-5789390 Msa0233450:CDS 45.0%
!! GATCATGCTGAAGCTTTGGA+GGG + chr2_2:5789372-5789391 Msa0233450:CDS 45.0%
TGCAAATCTAGCAATCCTGG+GGG + chr2_2:5789407-5789426 Msa0233450:CDS 45.0%
ATGTCGTGGGTGTTTAGTTG+TGG - chr2_2:5789460-5789479 None:intergenic 45.0%
TGCATGTCTGCTTATGCTTG+GGG - chr2_2:5789533-5789552 None:intergenic 45.0%
GTGCATGTCTGCTTATGCTT+GGG - chr2_2:5789534-5789553 None:intergenic 45.0%
TGTGCATGTCTGCTTATGCT+TGG - chr2_2:5789535-5789554 None:intergenic 45.0%
CTTCTCACGCCGTAACATAA+GGG - chr2_2:5789595-5789614 None:intergenic 45.0%
TCTTCTCACGCCGTAACATA+AGG - chr2_2:5789596-5789615 None:intergenic 45.0%
TTCAGATGAAGGCAGTTGCT+GGG - chr2_2:5789673-5789692 None:intergenic 45.0%
TTTCAGATGAAGGCAGTTGC+TGG - chr2_2:5789674-5789693 None:intergenic 45.0%
TAGTAGCCCAACCATGAACA+AGG + chr2_2:5789737-5789756 Msa0233450:CDS 45.0%
TACCCTCCTTGTTCATGGTT+GGG - chr2_2:5789746-5789765 None:intergenic 45.0%
TTACCCTCCTTGTTCATGGT+TGG - chr2_2:5789747-5789766 None:intergenic 45.0%
! GTTCTGATGATGATCCTCAC+CGG + chr2_2:5789772-5789791 Msa0233450:CDS 45.0%
! ACGGATGATTTTATCCGGTG+AGG - chr2_2:5789789-5789808 None:intergenic 45.0%
GACAATTCTTCTTCTCGCTC+TGG - chr2_2:5789849-5789868 None:intergenic 45.0%
CAGCAGACTTTGTTGAACTC+TGG + chr2_2:5789939-5789958 Msa0233450:CDS 45.0%
! TCTGGTACTGGAGATTCATC+AGG + chr2_2:5789957-5789976 Msa0233450:CDS 45.0%
AGGGAAGTGAAGCTTAGCAA+CGG + chr2_2:5790011-5790030 Msa0233450:CDS 45.0%
GCCGAAGTGGATATGAACTA+CGG - chr2_2:5790175-5790194 None:intergenic 45.0%
TGAATAGTAAGACGCCGAAG+TGG - chr2_2:5790188-5790207 None:intergenic 45.0%
TCATGGAATGGAGCTGAATG+AGG + chr2_2:5790308-5790327 Msa0233450:three_prime_UTR 45.0%
AATGGAGCTGAATGAGGTAG+TGG + chr2_2:5790314-5790333 Msa0233450:three_prime_UTR 45.0%
ATGGAGCTGAATGAGGTAGT+GGG + chr2_2:5790315-5790334 Msa0233450:three_prime_UTR 45.0%
!!! TATTAATTTGAAAATATTTT+TGG + chr2_2:5784545-5784564 Msa0233450:intron 5.0%
!!! TTTTTTGTATTATTTTTATA+TGG + chr2_2:5788414-5788433 Msa0233450:intron 5.0%
AAAGGTTGGAGACTTCGCAC+TGG + chr2_2:5780598-5780617 Msa0233450:CDS 50.0%
GCTCAACTCTGTGATCGATG+CGG + chr2_2:5780628-5780647 Msa0233450:CDS 50.0%
CTCAACTCTGTGATCGATGC+GGG + chr2_2:5780629-5780648 Msa0233450:CDS 50.0%
AACGCCACGTGTAACTTGGT+CGG - chr2_2:5780771-5780790 None:intergenic 50.0%
ACCAAGTTACACGTGGCGTT+TGG + chr2_2:5780771-5780790 Msa0233450:intron 50.0%
ACCAAACGCCACGTGTAACT+TGG - chr2_2:5780775-5780794 None:intergenic 50.0%
! ACACGTGGCGTTTGGTTTCA+TGG + chr2_2:5780779-5780798 Msa0233450:intron 50.0%
TAGTTGTGTCTGAGGGGGTT+AGG + chr2_2:5780989-5781008 Msa0233450:intron 50.0%
! ACCCGAGTGGGTTTGAATTC+CGG + chr2_2:5781036-5781055 Msa0233450:intron 50.0%
ACCGGAATTCAAACCCACTC+GGG - chr2_2:5781040-5781059 None:intergenic 50.0%
CACCGGAATTCAAACCCACT+CGG - chr2_2:5781041-5781060 None:intergenic 50.0%
TTGGGGCCCTTCATTGAGTT+TGG - chr2_2:5781472-5781491 None:intergenic 50.0%
TCATTGTGTTGGGTGTGAGG+AGG - chr2_2:5781674-5781693 None:intergenic 50.0%
CCTTCATTGTGTTGGGTGTG+AGG - chr2_2:5781677-5781696 None:intergenic 50.0%
CCTCACACCCAACACAATGA+AGG + chr2_2:5781674-5781693 Msa0233450:intron 50.0%
AGCAGCCCAAATGCCACAAT+TGG + chr2_2:5781716-5781735 Msa0233450:intron 50.0%
GCAGCCCAAATGCCACAATT+GGG + chr2_2:5781717-5781736 Msa0233450:intron 50.0%
GTCGCCCAATTGTGGCATTT+GGG - chr2_2:5781724-5781743 None:intergenic 50.0%
AGTCGCCCAATTGTGGCATT+TGG - chr2_2:5781725-5781744 None:intergenic 50.0%
AATGCCACAATTGGGCGACT+AGG + chr2_2:5781725-5781744 Msa0233450:intron 50.0%
ATGCCACAATTGGGCGACTA+GGG + chr2_2:5781726-5781745 Msa0233450:intron 50.0%
TGGGAATTCTGCCGTAGTTG+TGG - chr2_2:5781757-5781776 None:intergenic 50.0%
! GGCTGGAAAGTGTACTCTGT+TGG - chr2_2:5781777-5781796 None:intergenic 50.0%
CAGCCCTTATCCCTTCTGTT+GGG + chr2_2:5781792-5781811 Msa0233450:intron 50.0%
GAGCCCAACAGAAGGGATAA+GGG - chr2_2:5781798-5781817 None:intergenic 50.0%
TGAGCCCAACAGAAGGGATA+AGG - chr2_2:5781799-5781818 None:intergenic 50.0%
TTATCCCTTCTGTTGGGCTC+AGG + chr2_2:5781798-5781817 Msa0233450:intron 50.0%
!! TATCTGGCCTTCTGGAGTTC+TGG + chr2_2:5781847-5781866 Msa0233450:intron 50.0%
GAAAACCTAGGGAACCAGCT+TGG - chr2_2:5781996-5782015 None:intergenic 50.0%
TCCACTCAAACGCTTCTGGT+TGG + chr2_2:5782429-5782448 Msa0233450:CDS 50.0%
!! TCCAACCAGAAGCGTTTGAG+TGG - chr2_2:5782433-5782452 None:intergenic 50.0%
! ACTCAAACGCTTCTGGTTGG+AGG + chr2_2:5782432-5782451 Msa0233450:CDS 50.0%
ATCCCTCTCCCTATCCTGTT+TGG + chr2_2:5782739-5782758 Msa0233450:intron 50.0%
TCCCTCTCCCTATCCTGTTT+GGG + chr2_2:5782740-5782759 Msa0233450:intron 50.0%
GACTCAAGCCCAAACAGGAT+AGG - chr2_2:5782751-5782770 None:intergenic 50.0%
!! GAGAGGCACCGTAAACAAAC+TGG - chr2_2:5783206-5783225 None:intergenic 50.0%
ATAAAGATTGTGGCCACGGC+AGG - chr2_2:5783524-5783543 None:intergenic 50.0%
TGGAGTCAGTTAGCTGGATC+AGG + chr2_2:5783594-5783613 Msa0233450:CDS 50.0%
AACTGCTTGCCTAGATGAGG+TGG - chr2_2:5784129-5784148 None:intergenic 50.0%
GCTTCACCTGATGAGTCAAG+AGG - chr2_2:5784171-5784190 None:intergenic 50.0%
TGACTCATCAGGTGAAGCTC+AGG + chr2_2:5784173-5784192 Msa0233450:CDS 50.0%
GTGAAGCTCAGGTTCGCAAT+GGG + chr2_2:5784184-5784203 Msa0233450:CDS 50.0%
GTCAGTTGTTGCCACGGTAT+TGG + chr2_2:5784235-5784254 Msa0233450:CDS 50.0%
TTGGCCCAGGTGTACTGAAT+TGG + chr2_2:5784254-5784273 Msa0233450:CDS 50.0%
ACTTTGAGTGCCAGTGATGC+TGG + chr2_2:5784455-5784474 Msa0233450:CDS 50.0%
CTTTGAGTGCCAGTGATGCT+GGG + chr2_2:5784456-5784475 Msa0233450:CDS 50.0%
TGCAGGCCAGGCATTACAAA+AGG - chr2_2:5784645-5784664 None:intergenic 50.0%
! CCAAGCCTTATCTCACTAGG+TGG - chr2_2:5785043-5785062 None:intergenic 50.0%
CCACCTAGTGAGATAAGGCT+TGG + chr2_2:5785040-5785059 Msa0233450:intron 50.0%
! CCACCAAGCCTTATCTCACT+AGG - chr2_2:5785046-5785065 None:intergenic 50.0%
CCTAGTGAGATAAGGCTTGG+TGG + chr2_2:5785043-5785062 Msa0233450:intron 50.0%
TGGGAAGTAGGTCTGTCTCA+TGG - chr2_2:5785583-5785602 None:intergenic 50.0%
AGGTGACACAGGTAAGCCAA+TGG + chr2_2:5785755-5785774 Msa0233450:intron 50.0%
CAGGTAAGCCAATGGCATGA+AGG + chr2_2:5785763-5785782 Msa0233450:intron 50.0%
ATATGCACGGACCTTCCTTC+TGG + chr2_2:5785860-5785879 Msa0233450:intron 50.0%
CAACGAACAGGCCCTTTGTA+AGG + chr2_2:5786039-5786058 Msa0233450:intron 50.0%
TGCCAGCAATTAGGCGGTTA+GGG - chr2_2:5786259-5786278 None:intergenic 50.0%
ATGCCAGCAATTAGGCGGTT+AGG - chr2_2:5786260-5786279 None:intergenic 50.0%
CCGCCTAATTGCTGGCATTT+AGG + chr2_2:5786262-5786281 Msa0233450:intron 50.0%
! AGTGCTGGAAGCTGCAATGA+TGG - chr2_2:5786291-5786310 None:intergenic 50.0%
CGCAGTAACATTTAGCCGGT+TGG + chr2_2:5786611-5786630 Msa0233450:intron 50.0%
! CCTGAAGGGAGGTTGGTTAT+GGG + chr2_2:5786636-5786655 Msa0233450:CDS 50.0%
! ATGCTGTTTGGGTTCAGCTC+AGG + chr2_2:5787013-5787032 Msa0233450:intron 50.0%
CTTGGGACATGATTAGGAGG+GGG - chr2_2:5787609-5787628 None:intergenic 50.0%
GCTTGGGACATGATTAGGAG+GGG - chr2_2:5787610-5787629 None:intergenic 50.0%
GCGAGGACGAAGGATTGTTT+GGG - chr2_2:5788096-5788115 None:intergenic 50.0%
TTCACAGACAGGCTACAGGA+TGG - chr2_2:5788118-5788137 None:intergenic 50.0%
ATAGATGGCTTCCCAAGCAC+CGG - chr2_2:5788304-5788323 None:intergenic 50.0%
GGATCACTCTCGTACCTTTC+TGG - chr2_2:5788858-5788877 None:intergenic 50.0%
AATCTAGCAATCCTGGGGGA+AGG + chr2_2:5789411-5789430 Msa0233450:CDS 50.0%
ATCTAGCAATCCTGGGGGAA+GGG + chr2_2:5789412-5789431 Msa0233450:CDS 50.0%
TAGTTGTGGCCTGGGAAGAT+GGG - chr2_2:5789446-5789465 None:intergenic 50.0%
TTAGTTGTGGCCTGGGAAGA+TGG - chr2_2:5789447-5789466 None:intergenic 50.0%
TGGGTGTTTAGTTGTGGCCT+GGG - chr2_2:5789454-5789473 None:intergenic 50.0%
AAACACCCACGACATAGACC+CGG + chr2_2:5789465-5789484 Msa0233450:CDS 50.0%
CAAACAATGCAAGAGCAGCC+GGG - chr2_2:5789486-5789505 None:intergenic 50.0%
GCAAACAATGCAAGAGCAGC+CGG - chr2_2:5789487-5789506 None:intergenic 50.0%
CACGCCGTAACATAAGGGTA+CGG - chr2_2:5789590-5789609 None:intergenic 50.0%
TAGCCCAACCATGAACAAGG+AGG + chr2_2:5789740-5789759 Msa0233450:CDS 50.0%
AGCCCAACCATGAACAAGGA+GGG + chr2_2:5789741-5789760 Msa0233450:CDS 50.0%
ATTCTTCTTCTCGCTCTGGC+TGG - chr2_2:5789845-5789864 None:intergenic 50.0%
CGAGAAGAAGAATTGTCGCC+TGG + chr2_2:5789852-5789871 Msa0233450:CDS 50.0%
TTGTCGCCTGGTTCAGATTC+TGG + chr2_2:5789864-5789883 Msa0233450:CDS 50.0%
ACACCACCAGAATCTGAACC+AGG - chr2_2:5789873-5789892 None:intergenic 50.0%
ACATTTCAGCAGCAGCATCG+TGG - chr2_2:5789908-5789927 None:intergenic 50.0%
ATCAGGTAGTCAGTCACAGC+AGG + chr2_2:5789974-5789993 Msa0233450:CDS 50.0%
AGCAGGTAGGAGATGTTGTG+AGG + chr2_2:5789991-5790010 Msa0233450:CDS 50.0%
GCAGGTAGGAGATGTTGTGA+GGG + chr2_2:5789992-5790011 Msa0233450:CDS 50.0%
AGGGGTAGGAAAAAGGGGAA+TGG + chr2_2:5790224-5790243 Msa0233450:three_prime_UTR 50.0%
GGGGTAGGAAAAAGGGGAAT+GGG + chr2_2:5790225-5790244 Msa0233450:three_prime_UTR 50.0%
GGTACGGTGAGCTCTCAAAA+AGG - chr2_2:5790357-5790376 None:intergenic 50.0%
ACTCGAGCTAAAGACCCGAG+TGG + chr2_2:5781023-5781042 Msa0233450:intron 55.0%
CTCGAGCTAAAGACCCGAGT+GGG + chr2_2:5781024-5781043 Msa0233450:intron 55.0%
ATTCATGGGGGTCAGGGTAG+AGG - chr2_2:5781360-5781379 None:intergenic 55.0%
TGTGTTGGGTGTGAGGAGGT+GGG - chr2_2:5781670-5781689 None:intergenic 55.0%
TTGTGTTGGGTGTGAGGAGG+TGG - chr2_2:5781671-5781690 None:intergenic 55.0%
TGCCACAATTGGGCGACTAG+GGG + chr2_2:5781727-5781746 Msa0233450:intron 55.0%
CTAGGGGTGGACCACAACTA+CGG + chr2_2:5781743-5781762 Msa0233450:intron 55.0%
CCAACAGAAGGGATAAGGGC+TGG - chr2_2:5781794-5781813 None:intergenic 55.0%
CCAGCCCTTATCCCTTCTGT+TGG + chr2_2:5781791-5781810 Msa0233450:intron 55.0%
CCAGCTTGGCATGAGATGAG+CGG - chr2_2:5781982-5782001 None:intergenic 55.0%
! TCATGCCAAGCTGGTTCCCT+AGG + chr2_2:5781988-5782007 Msa0233450:intron 55.0%
GCCCAAACAGGATAGGGAGA+GGG - chr2_2:5782744-5782763 None:intergenic 55.0%
AGCCCAAACAGGATAGGGAG+AGG - chr2_2:5782745-5782764 None:intergenic 55.0%
AGACTGGGTGCTTGCTTCCA+GGG - chr2_2:5783627-5783646 None:intergenic 55.0%
ATGCACATCTGGAGGCTGGT+CGG - chr2_2:5783670-5783689 None:intergenic 55.0%
GAGAATGCACATCTGGAGGC+TGG - chr2_2:5783674-5783693 None:intergenic 55.0%
AAGGTTGCCCCCCTCATCAT+TGG + chr2_2:5783737-5783756 Msa0233450:CDS 55.0%
GGTGAAGCTCAGGTTCGCAA+TGG + chr2_2:5784183-5784202 Msa0233450:CDS 55.0%
CCAGTGATGCTGGGCGAATT+GGG + chr2_2:5784465-5784484 Msa0233450:CDS 55.0%
CAGTCCATGCAGTTGCAAGC+AGG + chr2_2:5785735-5785754 Msa0233450:CDS 55.0%
GTCACCTGCTTGCAACTGCA+TGG - chr2_2:5785742-5785761 None:intergenic 55.0%
CAGTTGCAAGCAGGTGACAC+AGG + chr2_2:5785744-5785763 Msa0233450:CDS 55.0%
CTAAACGAGGGCCAGAAGGA+AGG - chr2_2:5785874-5785893 None:intergenic 55.0%
TTAGGGGCTGACCGCAATGA+AGG - chr2_2:5786242-5786261 None:intergenic 55.0%
GCCAGCAATTAGGCGGTTAG+GGG - chr2_2:5786258-5786277 None:intergenic 55.0%
TTTAGCCGGTTGGAGCCTGA+AGG + chr2_2:5786621-5786640 Msa0233450:CDS 55.0%
TTAGCCGGTTGGAGCCTGAA+GGG + chr2_2:5786622-5786641 Msa0233450:CDS 55.0%
! GCCTGAAGGGAGGTTGGTTA+TGG + chr2_2:5786635-5786654 Msa0233450:CDS 55.0%
CCCATAACCAACCTCCCTTC+AGG - chr2_2:5786639-5786658 None:intergenic 55.0%
GGCGAGGACGAAGGATTGTT+TGG - chr2_2:5788097-5788116 None:intergenic 55.0%
TTACAGGATGCTCCGGTGCT+TGG + chr2_2:5788289-5788308 Msa0233450:intron 55.0%
TACAGGATGCTCCGGTGCTT+GGG + chr2_2:5788290-5788309 Msa0233450:intron 55.0%
! GCTGGAAGAAGTGCACATGC+TGG - chr2_2:5788804-5788823 None:intergenic 55.0%
TCTAGCAATCCTGGGGGAAG+GGG + chr2_2:5789413-5789432 Msa0233450:CDS 55.0%
GTGGGTGTTTAGTTGTGGCC+TGG - chr2_2:5789455-5789474 None:intergenic 55.0%
ATCCAGCCGCCTAGTGGAAA+GGG + chr2_2:5789507-5789526 Msa0233450:CDS 55.0%
TCGCCTGGTTCAGATTCTGG+TGG + chr2_2:5789867-5789886 Msa0233450:CDS 55.0%
GGTAGTCAGTCACAGCAGGT+AGG + chr2_2:5789978-5789997 Msa0233450:CDS 55.0%
ATTCCCGCACCGTCCACGTT+CGG - chr2_2:5781495-5781514 None:intergenic 60.0%
! TGGGTGTGAGGAGGTGGGTT+TGG - chr2_2:5781665-5781684 None:intergenic 60.0%
CACCCCTAGTCGCCCAATTG+TGG - chr2_2:5781732-5781751 None:intergenic 60.0%
CACAATTGGGCGACTAGGGG+TGG + chr2_2:5781730-5781749 Msa0233450:intron 60.0%
TGGGCCTGAGCCCAACAGAA+GGG - chr2_2:5781805-5781824 None:intergenic 60.0%
ATGGGCCTGAGCCCAACAGA+AGG - chr2_2:5781806-5781825 None:intergenic 60.0%
CCGCTCATCTCATGCCAAGC+TGG + chr2_2:5781979-5781998 Msa0233450:intron 60.0%
CTCAGCCATCTAACCTGCCG+TGG + chr2_2:5783508-5783527 Msa0233450:intron 60.0%
TGTGGCCACGGCAGGTTAGA+TGG - chr2_2:5783516-5783535 None:intergenic 60.0%
CTGGATCAGGACCTGTACCC+TGG + chr2_2:5783607-5783626 Msa0233450:CDS 60.0%
GGTGCTTGCTTCCAGGGTAC+AGG - chr2_2:5783621-5783640 None:intergenic 60.0%
CAGACTGGGTGCTTGCTTCC+AGG - chr2_2:5783628-5783647 None:intergenic 60.0%
!! TGTTGCCACGGTATTGGCCC+AGG + chr2_2:5784241-5784260 Msa0233450:CDS 60.0%
GTACACCTGGGCCAATACCG+TGG - chr2_2:5784249-5784268 None:intergenic 60.0%
GCCAGTGATGCTGGGCGAAT+TGG + chr2_2:5784464-5784483 Msa0233450:CDS 60.0%
CCCAATTCGCCCAGCATCAC+TGG - chr2_2:5784468-5784487 None:intergenic 60.0%
GCCCCTAACCGCCTAATTGC+TGG + chr2_2:5786254-5786273 Msa0233450:intron 60.0%
ACCTCCCTTCAGGCTCCAAC+CGG - chr2_2:5786629-5786648 None:intergenic 60.0%
GTTGGAGCCTGAAGGGAGGT+TGG + chr2_2:5786629-5786648 Msa0233450:CDS 60.0%
GATTAGGAGGGGGACGAAGC+AGG - chr2_2:5787599-5787618 None:intergenic 60.0%
CTACAGGATGGCGAGGACGA+AGG - chr2_2:5788106-5788125 None:intergenic 60.0%
AGACAGGCTACAGGATGGCG+AGG - chr2_2:5788113-5788132 None:intergenic 60.0%
AGCAGCCGGGTCTATGTCGT+GGG - chr2_2:5789473-5789492 None:intergenic 60.0%
GTTTGCATCCAGCCGCCTAG+TGG + chr2_2:5789501-5789520 Msa0233450:CDS 60.0%
CATCCAGCCGCCTAGTGGAA+AGG + chr2_2:5789506-5789525 Msa0233450:CDS 60.0%
TTGGGGCCCTTTCCACTAGG+CGG - chr2_2:5789516-5789535 None:intergenic 60.0%
TGCTTGGGGCCCTTTCCACT+AGG - chr2_2:5789519-5789538 None:intergenic 60.0%
ATGGGGGTCAGGGTAGAGGC+GGG - chr2_2:5781356-5781375 None:intergenic 65.0%
CATGGGGGTCAGGGTAGAGG+CGG - chr2_2:5781357-5781376 None:intergenic 65.0%
TGAAGGGCCCCAACCGAACG+TGG + chr2_2:5781479-5781498 Msa0233450:intron 65.0%
GCACCGTCCACGTTCGGTTG+GGG - chr2_2:5781489-5781508 None:intergenic 65.0%
CGCACCGTCCACGTTCGGTT+GGG - chr2_2:5781490-5781509 None:intergenic 65.0%
CCAACCGAACGTGGACGGTG+CGG + chr2_2:5781488-5781507 Msa0233450:intron 65.0%
CAACCGAACGTGGACGGTGC+GGG + chr2_2:5781489-5781508 Msa0233450:intron 65.0%
CTTCCTCGGGCATCTGCTCG+AGG - chr2_2:5784213-5784232 None:intergenic 65.0%
TGCTGGGCGAATTGGGCGCT+TGG + chr2_2:5784472-5784491 Msa0233450:CDS 65.0%
GGGGCTGACCGCAATGAAGG+CGG - chr2_2:5786239-5786258 None:intergenic 65.0%
AGCAATCCTGGGGGAAGGGG+AGG + chr2_2:5789416-5789435 Msa0233450:CDS 65.0%
GGAGGCTCTCCCATCTTCCC+AGG + chr2_2:5789434-5789453 Msa0233450:CDS 65.0%
GAGCAGCCGGGTCTATGTCG+TGG - chr2_2:5789474-5789493 None:intergenic 65.0%
GGGCCCCAACCGAACGTGGA+CGG + chr2_2:5781483-5781502 Msa0233450:intron 70.0%
CCGCACCGTCCACGTTCGGT+TGG - chr2_2:5781491-5781510 None:intergenic 70.0%
CGACCTCGAGCAGATGCCCG+AGG + chr2_2:5784207-5784226 Msa0233450:CDS 70.0%
GCCGGTTGGAGCCTGAAGGG+AGG + chr2_2:5786625-5786644 Msa0233450:CDS 70.0%
GGCCCTTTCCACTAGGCGGC+TGG - chr2_2:5789512-5789531 None:intergenic 70.0%
GGAGAGCCTCCCCTTCCCCC+AGG - chr2_2:5789425-5789444 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 5780322 5790527 5780322 ID=Msa0233450;Name=Msa0233450
chr2_2 mRNA 5780322 5790527 5780322 ID=Msa0233450-mRNA-1;Parent=Msa0233450;Name=Msa0233450-mRNA-1;_AED=0.06;_eAED=0.06;_QI=165|0.84|0.78|1|0.92|0.92|14|424|905
chr2_2 exon 5780322 5780650 5780322 ID=Msa0233450-mRNA-1:exon:2531;Parent=Msa0233450-mRNA-1
chr2_2 exon 5782364 5782475 5782364 ID=Msa0233450-mRNA-1:exon:2532;Parent=Msa0233450-mRNA-1
chr2_2 exon 5782610 5782708 5782610 ID=Msa0233450-mRNA-1:exon:2533;Parent=Msa0233450-mRNA-1
chr2_2 exon 5783513 5783849 5783513 ID=Msa0233450-mRNA-1:exon:2534;Parent=Msa0233450-mRNA-1
chr2_2 exon 5783959 5784298 5783959 ID=Msa0233450-mRNA-1:exon:2535;Parent=Msa0233450-mRNA-1
chr2_2 exon 5784421 5784517 5784421 ID=Msa0233450-mRNA-1:exon:2536;Parent=Msa0233450-mRNA-1
chr2_2 exon 5785591 5785765 5785591 ID=Msa0233450-mRNA-1:exon:2537;Parent=Msa0233450-mRNA-1
chr2_2 exon 5786616 5786695 5786616 ID=Msa0233450-mRNA-1:exon:2538;Parent=Msa0233450-mRNA-1
chr2_2 exon 5787274 5787318 5787274 ID=Msa0233450-mRNA-1:exon:2539;Parent=Msa0233450-mRNA-1
chr2_2 exon 5787405 5787668 5787405 ID=Msa0233450-mRNA-1:exon:2540;Parent=Msa0233450-mRNA-1
chr2_2 exon 5788295 5788344 5788295 ID=Msa0233450-mRNA-1:exon:2541;Parent=Msa0233450-mRNA-1
chr2_2 exon 5788749 5788862 5788749 ID=Msa0233450-mRNA-1:exon:2542;Parent=Msa0233450-mRNA-1
chr2_2 exon 5789139 5789209 5789139 ID=Msa0233450-mRNA-1:exon:2543;Parent=Msa0233450-mRNA-1
chr2_2 exon 5789334 5790527 5789334 ID=Msa0233450-mRNA-1:exon:2544;Parent=Msa0233450-mRNA-1
chr2_2 five_prime_UTR 5780322 5780486 5780322 ID=Msa0233450-mRNA-1:five_prime_utr;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5780487 5780650 5780487 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5782364 5782475 5782364 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5782610 5782708 5782610 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5783513 5783849 5783513 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5783959 5784298 5783959 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5784421 5784517 5784421 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5785591 5785765 5785591 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5786616 5786695 5786616 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5787274 5787318 5787274 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5787405 5787668 5787405 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5788295 5788344 5788295 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5788749 5788862 5788749 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5789139 5789209 5789139 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 CDS 5789334 5790103 5789334 ID=Msa0233450-mRNA-1:cds;Parent=Msa0233450-mRNA-1
chr2_2 three_prime_UTR 5790104 5790527 5790104 ID=Msa0233450-mRNA-1:three_prime_utr;Parent=Msa0233450-mRNA-1
Gene Sequence

>Msa0233450

ATGGCTTCTTCTTCTTCAGTTCCATCTTCTTCTTCTTCTTCGACTATTTGTTCTTCAACCTTAAAACGATGCTTCAATTCTGACTGTAAAGACTTGAGGTCTACTACTAAGAAAGGTTGGAGACTTCGCACTGGTGACCTAGCTCAACTCTGTGATCGATGCGGTAAAAAATTGATTGTTTCTGTGATACTTAGTTCTGCTTTTGAAGAAGGGAGATTCTGTGACATTTTCCACTCAAACGCTTCTGGTTGGAGGAATTGTGAGACTTGTAGAAAGCGAATTCACTGTGGGTGTATTGTTTCAAGTAACACCTTTGTGTTGTTGGATCCAGGAGGAATTGAATGCTTTACATGTGCCCGCAAAAATGTTATTCTGCCATCTAACCTGCCGTGGCCACAATCTTTATCTCTTACAAATCGTTTATCGGAGAGATATAGAGACATGTCTGGCAAAAGTTGGAGTCAGTTAGCTGGATCAGGACCTGTACCCTGGAAGCAAGCACCCAGTCTGTTCAATTCAGCTTCTTCATCCGACCAGCCTCCAGATGTGCATTCTCTAGTTGATTTATCAAATAACTTTGACAAAATATATGGCAATGAAAGGTTGCCCCCCTCATCATTGGAAAAGAAAAATGAGGATTTGTCTGGAATATCAGCTAATTGGAATGTCAAACTGGGTTCAAGGGACATGTTGCTTATGAACGGTAATACAGGAATGAGGAATGAGGACAAATCAGGTCCGTGTTTAAATATGTGCCAACAGCCTCATACTCTAAAGGAAGATTCATCTTCTCAACCGTTTGGTTTATCTGTACCTTATTCATCCCCAAATGAAAGAAATGGTCAAATTGGGGTAACTGGAATTCATCTACAACAAACTCCACCTCATCTAGGCAAGCAGTTTAGTGGCACTATGCATTTACCTCTTGACTCATCAGGTGAAGCTCAGGTTCGCAATGGGCGACCTCGAGCAGATGCCCGAGGAAGAAGTCAGTTGTTGCCACGGTATTGGCCCAGGTGTACTGAATTGGAGCTACAGCAAATATCTGTCGATTCTAATTCTGTAATAACTCCCTTGTTCCAAAAAACTTTGAGTGCCAGTGATGCTGGGCGAATTGGGCGCTTGGTACTACCCAAAAAATGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGGTTGCCTCTTAAAATCCTCGATGCAAAAGGAAAGGAATGGATATTTCAGTTCCGCTTCTGGCCAAATAACAACAGCAGAATGTATGTTTTAGAGGGTGTAACTCCGTGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGTTGGAGCCTGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTACAAATCCTTTGCCATCCGATCAGGATAATGAAGCTAATAAGACTGGAAACGGATTTTCTGCTCACGAAGTTGAATTGGCTGATCCTAGTTCCTGGTCAAATGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGGAGCAAATCTTTAATCTCTAGAAAGAGAAAAAACAACATATTGGGTTCAAAAAGTAAACGTCTAAAAATTGAAAATGAGGATATAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGCCTGCTTCGTCCCCCTCCTAATCATGTCCCAAGCATTGTGGTGATTGAAGGCTTTGAGTTTGAGGAATATGAGGATGCTCCGGTGCTTGGGAAGCCATCTATTTTCACTAGTGATAATATGGGTGAAAGGATTCAGTATACTCAATGTGAACATTGTCTGAAGTGGCGCAAATTGCCAGCATGTGCACTTCTTCCAGCAAAATGGACATGTTCAGATAATTCATGGGATCCAGAAAGATCTTCTTGTTCAGCTGCACAAGAGCTTACAACAGAACAACTTGAGAATTTGTTACCCCCTTGTAATTCAGCAGTTTCCAAGAAAATGAAGGCCACTAAGCAGGATCCTGATCATGCTGAAGCTTTGGAGGGACTTGATACACTTGCAAATCTAGCAATCCTGGGGGAAGGGGAGGCTCTCCCATCTTCCCAGGCCACAACTAAACACCCACGACATAGACCCGGCTGCTCTTGCATTGTTTGCATCCAGCCGCCTAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTCTGTTTAACGGTGAAGCGTCGTTTCCGTACCCTTATGTTACGGCGTGAGAAGAAACAGTCAGAAAAAGAAGCAGAAACAACACGTAAAAAGCAGCAGCAACAGAATTCCCAGCAACTGCCTTCATCTGAAATTTTGCTTGACGATGATTCCTTGCATAATAGTAATACGGGTGATAGTAGCCCAACCATGAACAAGGAGGGTAATGATGGTTCTGATGATGATCCTCACCGGATAAAATCATCCGTGTCTCCATTTAAAGGCCAAATTGATCTCAATATCCAGCCAGAGCGAGAAGAAGAATTGTCGCCTGGTTCAGATTCTGGTGGTGTGATGAAGCTGCTCCACGATGCTGCTGCTGAAATGTATCTCAAGCAGCAGCAGACTTTGTTGAACTCTGGTACTGGAGATTCATCAGGTAGTCAGTCACAGCAGGTAGGAGATGTTGTGAGGGAAGTGAAGCTTAGCAACGGTGTTATTCATGGTAGCAGTAGTCATAATGCTGATAAGGAACATGCCCAGTCTTTGTCTATGAACGTGTGA
Protein sequence

>Msa0233450

MASSSSVPSSSSSSTICSSTLKRCFNSDCKDLRSTTKKGWRLRTGDLAQLCDRCGKKLIVSVILSSAFEEGRFCDIFHSNASGWRNCETCRKRIHCGCIVSSNTFVLLDPGGIECFTCARKNVILPSNLPWPQSLSLTNRLSERYRDMSGKSWSQLAGSGPVPWKQAPSLFNSASSSDQPPDVHSLVDLSNNFDKIYGNERLPPSSLEKKNEDLSGISANWNVKLGSRDMLLMNGNTGMRNEDKSGPCLNMCQQPHTLKEDSSSQPFGLSVPYSSPNERNGQIGVTGIHLQQTPPHLGKQFSGTMHLPLDSSGEAQVRNGRPRADARGRSQLLPRYWPRCTELELQQISVDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKATNPLPSDQDNEANKTGNGFSAHEVELADPSSWSNVDKSGYIAKEALGSKSLISRKRKNNILGSKSKRLKIENEDIIELKITWQEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPSIFTSDNMGERIQYTQCEHCLKWRKLPACALLPAKWTCSDNSWDPERSSCSAAQELTTEQLENLLPPCNSAVSKKMKATKQDPDHAEALEGLDTLANLAILGEGEALPSSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQQNSQQLPSSEILLDDDSLHNSNTGDSSPTMNKEGNDGSDDDPHRIKSSVSPFKGQIDLNIQPEREEELSPGSDSGGVMKLLHDAAAEMYLKQQQTLLNSGTGDSSGSQSQQVGDVVREVKLSNGVIHGSSSHNADKEHAQSLSMNV*