AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0236020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0236020 MtrunA17_Chr2g0284911 93.487 261 3 2 88 335 1 260 2.33e-176 489
Msa0236020 MtrunA17_Chr8g0380021 71.374 262 43 5 88 335 1 244 1.31e-125 360
Msa0236020 MtrunA17_Chr3g0097101 57.471 261 81 4 88 335 1 244 4.42e-92 275
Msa0236020 MtrunA17_Chr3g0077501 67.045 176 45 1 103 265 1 176 5.84e-75 230
Msa0236020 MtrunA17_Chr8g0351051 44.503 191 94 3 103 289 1 183 5.50e-48 162
Msa0236020 MtrunA17_Chr8g0351041 53.289 152 70 1 105 255 3 154 1.23e-46 155
Msa0236020 MtrunA17_Chr8g0351031 54.167 144 65 1 105 247 3 146 5.75e-46 155
Msa0236020 MtrunA17_Chr5g0411691 48.000 175 79 3 103 275 1 165 3.31e-45 154
Msa0236020 MtrunA17_Chr2g0279821 53.103 145 67 1 103 247 1 144 3.93e-44 151
Msa0236020 MtrunA17_Chr7g0246431 49.007 151 77 0 105 255 3 153 2.00e-43 149
Msa0236020 MtrunA17_Chr4g0049541 45.087 173 94 1 103 275 1 172 5.89e-43 148
Msa0236020 MtrunA17_Chr3g0122251 47.368 171 84 3 103 268 1 170 1.08e-41 145
Msa0236020 MtrunA17_Chr7g0220111 41.395 215 104 6 103 304 1 206 1.79e-41 145
Msa0236020 MtrunA17_Chr5g0420091 40.092 217 102 5 103 304 1 204 2.08e-41 144
Msa0236020 MtrunA17_Chr6g0455511 40.351 228 106 7 103 320 1 208 1.96e-40 142
Msa0236020 MtrunA17_Chr4g0061671 42.458 179 100 2 103 280 1 177 2.17e-40 140
Msa0236020 MtrunA17_Chr8g0366231 49.664 149 68 2 103 247 1 146 1.21e-39 140
Msa0236020 MtrunA17_Chr4g0057151 45.513 156 77 1 105 260 3 150 1.79e-38 135
Msa0236020 MtrunA17_Chr4g0061691 42.169 166 95 1 103 267 1 166 3.17e-37 133
Msa0236020 MtrunA17_Chr5g0420081 46.309 149 73 2 103 247 1 146 9.03e-36 129
Msa0236020 MtrunA17_Chr7g0220121 40.000 185 90 6 103 271 1 180 2.29e-35 129
Msa0236020 MtrunA17_Chr4g0020221 43.902 164 83 4 103 262 1 159 3.52e-35 128
Msa0236020 MtrunA17_Chr1g0204111 45.714 140 75 1 103 241 17 156 8.30e-35 127
Msa0236020 MtrunA17_Chr3g0125241 44.898 147 74 3 103 247 26 167 3.45e-34 124
Msa0236020 MtrunA17_Chr5g0412271 37.004 227 139 2 103 325 1 227 3.74e-33 122
Msa0236020 MtrunA17_Chr5g0412461 36.283 226 141 1 103 325 1 226 1.44e-32 120
Msa0236020 MtrunA17_Chr6g0474371 39.444 180 97 5 103 279 1 171 4.46e-32 118
Msa0236020 MtrunA17_Chr4g0018421 41.875 160 88 4 103 259 1 158 1.37e-30 115
Msa0236020 MtrunA17_Chr3g0142191 40.299 201 92 6 103 287 1 189 3.04e-30 115
Msa0236020 MtrunA17_Chr1g0159661 40.816 147 80 3 103 247 1 142 1.83e-28 108
Msa0236020 MtrunA17_Chr7g0246381 75.410 61 15 0 103 163 1 61 6.25e-28 103
Msa0236020 MtrunA17_Chr5g0427401 37.430 179 108 2 103 281 1 175 8.41e-28 108
Msa0236020 MtrunA17_Chr5g0404951 43.333 150 70 4 103 244 1 143 4.12e-27 106
Msa0236020 MtrunA17_Chr8g0377561 80.702 57 11 0 103 159 1 57 7.09e-27 102
Msa0236020 MtrunA17_Chr4g0049901 35.928 167 105 1 103 267 27 193 8.44e-27 105
Msa0236020 MtrunA17_Chr1g0164791 37.662 154 83 4 103 247 1 150 3.06e-26 104
Msa0236020 MtrunA17_Chr2g0308251 70.000 60 18 0 103 162 1 60 2.32e-25 97.4
Msa0236020 MtrunA17_Chr5g0427921 65.000 60 21 0 103 162 1 60 1.49e-23 92.0
Msa0236020 MtrunA17_Chr1g0173161 74.576 59 15 0 103 161 1 59 1.64e-23 92.4
Msa0236020 MtrunA17_Chr5g0425191 70.690 58 17 0 103 160 1 58 9.55e-23 91.3
Msa0236020 MtrunA17_Chr3g0134451 62.857 70 25 1 103 171 1 70 7.36e-22 94.4
Msa0236020 MtrunA17_Chr4g0044071 67.241 58 19 0 103 160 1 58 5.09e-21 87.0
Msa0236020 MtrunA17_Chr8g0357771 35.878 131 80 2 103 230 1 130 2.68e-18 81.3
Msa0236020 MtrunA17_Chr1g0169761 40.000 110 66 0 103 212 1 110 3.64e-18 80.9
Msa0236020 MtrunA17_Chr2g0292791 47.674 86 44 1 104 188 9 94 3.84e-18 82.4
Msa0236020 MtrunA17_Chr8g0379021 32.961 179 98 7 94 256 2 174 2.10e-17 79.0
Msa0236020 MtrunA17_Chr1g0206701 31.285 179 93 5 104 272 9 167 3.02e-17 79.7
Msa0236020 MtrunA17_Chr8g0376821 41.346 104 58 1 103 203 1 104 3.07e-17 78.6
Msa0236020 MtrunA17_Chr3g0099421 42.991 107 59 2 83 188 14 119 4.73e-17 79.7
Msa0236020 MtrunA17_Chr1g0208561 40.777 103 60 1 104 205 9 111 4.86e-17 79.0
Msa0236020 MtrunA17_Chr3g0089141 40.777 103 60 1 104 205 9 111 5.11e-17 79.0
Msa0236020 MtrunA17_Chr3g0099411 41.346 104 60 1 104 206 9 112 7.08e-17 78.6
Msa0236020 MtrunA17_Chr1g0208581 36.667 120 74 2 104 222 9 127 7.97e-17 78.6
Msa0236020 MtrunA17_Chr1g0175601 41.346 104 58 1 103 203 1 104 8.26e-17 77.4
Msa0236020 MtrunA17_Chr1g0206721 41.346 104 60 1 104 206 9 112 9.29e-17 78.6
Msa0236020 MtrunA17_Chr1g0166611 71.739 46 13 0 115 160 17 62 1.55e-16 75.1
Msa0236020 MtrunA17_Chr1g0188671 27.391 230 143 4 94 310 37 255 1.65e-16 78.6
Msa0236020 MtrunA17_Chr4g0074101 41.758 91 50 1 103 190 1 91 1.76e-16 76.6
Msa0236020 MtrunA17_Chr1g0206991 41.346 104 60 1 104 206 9 112 1.97e-16 76.3
Msa0236020 MtrunA17_Chr5g0419601 48.649 74 38 0 98 171 3 76 2.88e-16 77.0
Msa0236020 MtrunA17_Chr2g0325971 48.529 68 35 0 104 171 9 76 3.94e-16 76.6
Msa0236020 MtrunA17_Chr2g0333981 31.788 151 86 4 94 229 2 150 4.09e-16 75.1
Msa0236020 MtrunA17_Chr8g0355091 44.186 86 47 1 104 188 9 94 6.07e-16 76.3
Msa0236020 MtrunA17_Chr1g0175611 42.857 91 49 1 103 190 1 91 7.01e-16 74.3
Msa0236020 MtrunA17_Chr1g0149391 39.091 110 66 1 104 212 9 118 9.71e-16 75.5
Msa0236020 MtrunA17_Chr1g0187361 51.471 68 33 0 104 171 9 76 1.02e-15 75.5
Msa0236020 MtrunA17_Chr2g0317451 50.000 68 34 0 104 171 9 76 2.71e-15 74.3
Msa0236020 MtrunA17_Chr2g0317481 50.000 68 34 0 104 171 9 76 2.76e-15 74.3
Msa0236020 MtrunA17_Chr5g0417661 54.717 53 24 0 103 155 56 108 1.19e-14 69.7
Msa0236020 MtrunA17_Chr4g0018951 36.170 141 81 4 94 227 2 140 1.29e-14 70.9
Msa0236020 MtrunA17_Chr8g0356071 29.299 157 104 3 103 256 1 153 1.49e-14 70.5
Msa0236020 MtrunA17_Chr4g0060841 45.070 71 37 1 103 171 1 71 2.12e-14 73.2
Msa0236020 MtrunA17_Chr1g0180591 46.377 69 37 0 103 171 1 69 2.12e-14 70.5
Msa0236020 MtrunA17_Chr2g0300421 35.294 119 75 2 104 221 9 126 2.88e-14 70.1
Msa0236020 MtrunA17_Chr5g0422421 48.529 68 35 0 104 171 9 76 3.27e-14 71.2
Msa0236020 MtrunA17_Chr5g0422941 48.529 68 35 0 104 171 9 76 3.46e-14 71.2
Msa0236020 MtrunA17_Chr3g0119901 44.928 69 38 0 103 171 8 76 8.34e-14 69.3
Msa0236020 MtrunA17_Chr3g0085241 35.185 108 66 2 103 209 40 144 2.08e-13 68.9
Msa0236020 MtrunA17_Chr2g0300441 47.143 70 35 1 104 171 7 76 3.53e-13 68.2
Msa0236020 MtrunA17_Chr3g0089151 45.833 72 38 1 101 171 5 76 4.09e-13 65.9
Msa0236020 MtrunA17_Chr4g0052061 40.580 69 41 0 103 171 1 69 3.18e-12 63.9
Msa0236020 MtrunA17_Chr5g0427961 38.824 85 51 1 163 247 5 88 5.20e-12 63.5
Msa0236020 MtrunA17_Chr1g0212151 27.097 155 98 4 103 245 1 152 1.13e-11 65.1
Msa0236020 MtrunA17_Chr4g0052081 28.058 139 94 1 103 235 1 139 1.24e-11 62.8
Msa0236020 MtrunA17_Chr6g0457851 25.517 145 93 3 102 234 10 151 2.01e-11 64.3
Msa0236020 MtrunA17_Chr1g0206691 47.458 59 31 0 113 171 1 59 4.22e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0236020 AT4G18960.1 63.492 252 67 4 98 335 12 252 2.78e-105 308
Msa0236020 AT3G58780.1 59.274 248 75 4 101 335 14 248 1.87e-90 271
Msa0236020 AT3G58780.5 59.274 248 75 4 101 335 20 254 2.02e-90 271
Msa0236020 AT2G42830.1 58.468 248 75 4 101 335 14 246 2.11e-87 263
Msa0236020 AT2G42830.2 58.000 250 75 4 101 335 14 248 3.41e-87 263
Msa0236020 AT3G58780.4 52.313 281 75 4 101 335 14 281 1.87e-85 259
Msa0236020 AT3G58780.2 57.661 248 72 5 101 335 14 241 3.17e-85 257
Msa0236020 AT3G58780.3 53.846 273 75 5 101 335 14 273 1.12e-84 257
Msa0236020 AT4G09960.2 71.429 168 47 1 103 270 1 167 9.09e-82 248
Msa0236020 AT4G09960.4 59.091 220 66 3 89 284 81 300 1.21e-80 249
Msa0236020 AT4G09960.6 66.298 181 48 1 103 270 2 182 6.63e-80 243
Msa0236020 AT4G09960.5 66.298 181 48 1 103 270 11 191 8.08e-80 243
Msa0236020 AT4G09960.1 66.298 181 48 1 103 270 1 181 8.80e-80 243
Msa0236020 AT4G09960.3 65.934 182 49 1 102 270 26 207 1.13e-79 244
Msa0236020 AT4G18960.3 51.892 185 64 4 165 335 65 238 1.30e-54 179
Msa0236020 AT4G18960.2 51.892 185 64 4 165 335 65 238 1.30e-54 179
Msa0236020 AT3G57230.2 53.521 142 65 1 103 244 1 141 9.09e-46 153
Msa0236020 AT3G57230.1 52.414 145 68 1 103 247 1 144 2.07e-45 155
Msa0236020 AT3G57230.4 52.414 145 68 1 103 247 1 144 2.07e-45 155
Msa0236020 AT2G45650.1 52.414 145 68 1 103 247 1 144 4.06e-45 155
Msa0236020 AT2G45660.2 48.951 143 73 0 105 247 3 145 1.47e-43 147
Msa0236020 AT2G45660.1 45.455 176 89 2 105 273 3 178 3.94e-43 148
Msa0236020 AT5G62165.6 46.939 147 77 1 105 251 3 148 9.15e-43 145
Msa0236020 AT5G62165.9 46.939 147 77 1 105 251 3 148 9.15e-43 145
Msa0236020 AT5G62165.7 46.939 147 77 1 105 251 3 148 9.15e-43 145
Msa0236020 AT5G62165.8 46.939 147 77 1 105 251 3 148 9.15e-43 145
Msa0236020 AT5G62165.13 46.939 147 77 1 105 251 3 148 9.15e-43 145
Msa0236020 AT5G62165.17 44.231 156 86 1 105 260 3 157 3.35e-42 144
Msa0236020 AT5G62165.12 44.231 156 86 1 105 260 3 157 3.35e-42 144
Msa0236020 AT5G62165.11 44.231 156 86 1 105 260 3 157 3.35e-42 144
Msa0236020 AT2G22630.1 45.143 175 87 3 103 276 1 167 5.10e-42 146
Msa0236020 AT2G22630.2 45.143 175 87 3 103 276 1 167 5.10e-42 146
Msa0236020 AT5G62165.10 45.695 151 82 0 105 255 3 153 5.75e-42 145
Msa0236020 AT5G62165.4 45.695 151 82 0 105 255 3 153 5.75e-42 145
Msa0236020 AT4G37940.1 46.328 177 82 4 103 276 1 167 1.11e-41 145
Msa0236020 AT5G15800.1 48.447 161 76 2 103 256 1 161 1.73e-41 145
Msa0236020 AT5G15800.2 48.447 161 76 2 103 256 1 161 3.10e-41 145
Msa0236020 AT5G62165.3 46.154 143 77 0 105 247 3 145 3.78e-41 143
Msa0236020 AT5G62165.1 46.154 143 77 0 105 247 3 145 3.78e-41 143
Msa0236020 AT5G62165.2 46.154 143 77 0 105 247 3 145 3.78e-41 143
Msa0236020 AT4G11880.2 48.101 158 79 3 105 261 3 158 8.96e-41 141
Msa0236020 AT4G11880.3 48.101 158 79 3 105 261 3 158 8.96e-41 141
Msa0236020 AT1G24260.1 50.000 156 75 3 103 255 1 156 1.51e-40 143
Msa0236020 AT4G37940.4 47.799 159 79 3 103 260 1 156 4.49e-40 140
Msa0236020 AT1G24260.3 47.273 165 80 4 103 262 1 163 4.91e-40 141
Msa0236020 AT4G11880.4 50.694 144 69 2 105 247 3 145 5.12e-40 140
Msa0236020 AT4G11880.1 50.694 144 69 2 105 247 3 145 5.12e-40 140
Msa0236020 AT1G69120.2 43.976 166 90 3 103 266 1 165 1.38e-39 140
Msa0236020 AT3G61120.1 38.075 239 133 4 103 328 1 237 1.60e-39 140
Msa0236020 AT3G02310.1 50.350 143 70 1 103 244 1 143 1.84e-39 140
Msa0236020 AT1G24260.2 48.101 158 76 3 103 255 1 157 1.87e-39 140
Msa0236020 AT4G37940.3 49.655 145 70 2 103 246 1 143 2.24e-39 137
Msa0236020 AT4G22950.2 46.667 165 76 3 105 266 3 158 2.38e-39 137
Msa0236020 AT3G02310.2 50.350 143 70 1 103 244 1 143 3.84e-39 137
Msa0236020 AT4G22950.3 46.667 165 76 3 105 266 3 158 4.18e-39 138
Msa0236020 AT4G22950.1 46.667 165 76 3 105 266 3 158 4.18e-39 138
Msa0236020 AT1G69120.1 43.976 166 90 3 103 266 1 165 5.29e-39 139
Msa0236020 AT2G03710.3 47.917 144 72 2 103 244 1 143 2.78e-38 135
Msa0236020 AT5G60910.1 46.067 178 80 5 103 265 1 177 3.42e-38 136
Msa0236020 AT1G26310.1 45.509 167 88 3 103 266 1 167 4.49e-38 136
Msa0236020 AT2G03710.2 47.917 144 72 2 103 244 1 143 7.44e-38 136
Msa0236020 AT2G03710.1 47.917 144 72 2 103 244 1 143 7.55e-38 136
Msa0236020 AT5G13790.2 44.149 188 91 5 103 284 1 180 5.52e-37 134
Msa0236020 AT5G13790.1 43.850 187 90 5 103 284 1 177 7.57e-37 134
Msa0236020 AT4G18960.4 55.085 118 40 1 156 260 56 173 2.02e-36 130
Msa0236020 AT5G51860.2 44.872 156 84 2 105 259 3 157 2.52e-35 127
Msa0236020 AT5G51860.1 44.872 156 84 2 105 259 3 157 2.69e-35 128
Msa0236020 AT5G51870.5 44.966 149 75 2 100 244 21 166 2.42e-34 125
Msa0236020 AT5G51870.2 45.833 144 71 2 105 244 3 143 4.11e-34 123
Msa0236020 AT5G51870.1 44.242 165 80 4 105 265 3 159 5.10e-34 124
Msa0236020 AT2G14210.1 49.660 147 70 3 103 247 1 145 7.84e-34 125
Msa0236020 AT5G51870.4 43.976 166 81 4 105 266 3 160 9.81e-34 124
Msa0236020 AT2G14210.2 49.660 147 70 3 103 247 1 145 1.16e-33 124
Msa0236020 AT5G51870.3 44.242 165 80 4 105 265 13 169 1.80e-33 124
Msa0236020 AT5G62165.14 59.783 92 33 1 105 196 3 90 2.82e-31 114
Msa0236020 AT4G24540.1 36.932 176 98 1 103 265 1 176 6.16e-30 114
Msa0236020 AT3G30260.1 39.375 160 88 2 103 261 1 152 7.55e-30 114
Msa0236020 AT1G71692.1 40.000 200 87 4 103 269 1 200 1.78e-29 112
Msa0236020 AT3G54340.1 43.750 144 74 3 103 244 1 139 2.57e-29 112
Msa0236020 AT3G57390.3 38.095 168 92 3 103 262 1 164 3.52e-29 112
Msa0236020 AT5G23260.1 41.722 151 83 3 100 248 14 161 5.32e-29 112
Msa0236020 AT5G20240.1 42.857 147 77 3 103 247 1 142 7.32e-29 110
Msa0236020 AT3G57390.1 38.095 168 92 3 103 262 1 164 8.06e-29 112
Msa0236020 AT5G23260.3 41.139 158 86 3 103 257 1 154 9.76e-29 111
Msa0236020 AT2G22540.3 42.029 138 80 0 103 240 1 138 1.18e-28 111
Msa0236020 AT2G22540.1 42.029 138 80 0 103 240 1 138 1.18e-28 111
Msa0236020 AT5G20240.2 42.958 142 74 3 103 242 1 137 1.52e-28 108
Msa0236020 AT5G23260.4 42.000 150 82 3 100 247 14 160 1.52e-28 111
Msa0236020 AT5G23260.2 42.177 147 80 3 103 247 1 144 5.83e-28 109
Msa0236020 AT5G10140.4 38.122 181 97 4 103 281 1 168 1.82e-25 101
Msa0236020 AT2G22540.2 40.580 138 77 1 103 240 1 133 6.87e-25 101
Msa0236020 AT5G10140.1 36.598 194 96 5 103 281 1 182 9.95e-25 99.8
Msa0236020 AT5G65070.1 37.162 148 80 4 103 247 1 138 4.01e-24 98.2
Msa0236020 AT5G10140.2 40.940 149 77 3 103 249 1 140 7.68e-24 96.3
Msa0236020 AT5G10140.3 40.940 149 77 3 103 249 1 140 8.62e-24 97.1
Msa0236020 AT5G65070.4 36.552 145 79 3 103 244 1 135 1.10e-23 95.5
Msa0236020 AT1G77980.1 60.000 70 27 1 103 171 1 70 6.20e-22 95.1
Msa0236020 AT1G22130.1 60.000 70 27 1 103 171 1 70 1.07e-21 94.4
Msa0236020 AT5G65070.5 52.500 80 37 1 103 181 1 80 1.28e-21 91.7
Msa0236020 AT5G65070.2 52.500 80 37 1 103 181 1 80 1.38e-21 92.0
Msa0236020 AT5G65080.3 39.597 149 75 5 103 247 8 145 1.46e-21 90.9
Msa0236020 AT5G65070.3 62.712 59 22 0 103 161 1 59 4.10e-20 88.2
Msa0236020 AT1G31140.1 37.241 145 88 2 105 247 3 146 5.85e-20 87.0
Msa0236020 AT5G65060.3 34.416 154 92 3 103 255 1 146 6.76e-20 86.3
Msa0236020 AT5G65050.2 31.937 191 109 5 103 286 1 177 9.15e-20 85.9
Msa0236020 AT5G65060.1 34.416 154 92 3 103 255 1 146 1.04e-19 85.9
Msa0236020 AT5G65050.1 36.301 146 84 3 103 247 1 138 2.12e-19 84.7
Msa0236020 AT1G31140.2 36.184 152 82 4 105 247 3 148 2.26e-19 85.5
Msa0236020 AT5G65050.3 36.301 146 84 3 103 247 1 138 2.73e-19 85.1
Msa0236020 AT1G77950.3 52.857 70 32 1 103 171 1 70 1.16e-18 84.3
Msa0236020 AT1G77950.2 52.857 70 32 1 103 171 1 70 1.16e-18 84.3
Msa0236020 AT1G77950.1 52.857 70 32 1 103 171 1 70 1.16e-18 84.3
Msa0236020 AT1G77950.4 52.857 70 32 1 103 171 1 70 1.16e-18 84.3
Msa0236020 AT5G65050.5 52.113 71 33 1 103 172 1 71 7.44e-18 80.9
Msa0236020 AT5G65080.2 63.636 55 20 0 103 157 8 62 7.56e-18 81.3
Msa0236020 AT5G65060.2 35.065 154 80 5 103 255 1 135 2.91e-17 79.0
Msa0236020 AT4G36590.1 34.932 146 71 2 104 249 7 128 1.27e-16 78.6
Msa0236020 AT1G01530.1 36.842 133 65 3 100 232 3 116 1.80e-16 78.2
Msa0236020 AT1G18750.1 30.455 220 102 7 103 288 1 203 2.02e-16 79.7
Msa0236020 AT1G18750.4 47.887 71 35 1 103 171 1 71 2.47e-16 79.7
Msa0236020 AT4G37435.1 46.067 89 44 2 103 190 1 86 2.73e-16 76.3
Msa0236020 AT1G18750.3 47.887 71 35 1 103 171 1 71 3.32e-16 79.3
Msa0236020 AT1G77080.11 33.871 186 102 5 103 281 1 172 6.37e-16 75.1
Msa0236020 AT1G77080.4 37.671 146 82 3 103 247 1 138 1.41e-15 74.7
Msa0236020 AT1G77080.5 37.671 146 82 3 103 247 1 138 1.52e-15 73.9
Msa0236020 AT1G72350.1 55.882 68 28 1 104 171 43 108 1.53e-14 72.4
Msa0236020 AT1G77080.12 36.986 146 79 3 103 247 1 134 1.84e-14 70.5
Msa0236020 AT2G03060.3 47.887 71 35 1 103 171 1 71 1.93e-14 73.9
Msa0236020 AT2G03060.7 47.887 71 35 1 103 171 1 71 1.93e-14 73.9
Msa0236020 AT2G03060.1 47.887 71 35 1 103 171 1 71 1.93e-14 73.9
Msa0236020 AT2G34440.1 40.260 77 46 0 103 179 1 77 1.99e-14 70.9
Msa0236020 AT2G03060.2 47.887 71 35 1 103 171 1 71 2.19e-14 73.9
Msa0236020 AT1G77080.2 35.802 162 85 4 103 257 1 150 2.54e-14 70.9
Msa0236020 AT2G24840.1 47.826 69 36 0 103 171 62 130 4.49e-14 71.6
Msa0236020 AT5G60440.1 48.529 68 35 0 104 171 7 74 6.56e-14 71.6
Msa0236020 AT1G77080.8 51.316 76 36 1 103 177 1 76 7.06e-14 70.5
Msa0236020 AT1G65360.1 39.726 73 44 0 100 172 3 75 1.32e-13 69.7
Msa0236020 AT3G04100.1 43.478 69 39 0 104 172 14 82 1.43e-13 69.3
Msa0236020 AT3G66656.1 42.857 70 40 0 103 172 1 70 2.92e-13 67.8
Msa0236020 AT1G47760.1 34.848 132 81 3 103 234 1 127 8.05e-13 66.6
Msa0236020 AT1G69540.1 44.286 70 38 1 103 171 1 70 8.24e-13 68.9
Msa0236020 AT1G69540.2 44.286 70 38 1 103 171 1 70 1.19e-12 68.6
Msa0236020 AT3G57230.5 38.542 96 54 2 156 247 16 110 2.87e-12 65.5
Msa0236020 AT3G57230.3 38.542 96 54 2 156 247 16 110 2.87e-12 65.5
Msa0236020 AT1G29962.1 41.096 73 43 0 99 171 3 75 8.81e-12 63.5
Msa0236020 AT1G28460.1 41.892 74 43 0 98 171 2 75 1.21e-11 63.2

Find 63 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGTAGTTGCTGCTTTCTT+TGG 0.171200 2_2:+8938419 Msa0236020:CDS
GCAAATGATGGGTGAATCTT+TGG 0.255744 2_2:+8945932 Msa0236020:CDS
TGGTAGTTGCTGCTTTCTTT+GGG 0.273896 2_2:+8938420 Msa0236020:CDS
CTGGAGTCTAAATTAGAAAA+AGG 0.301302 2_2:+8945984 Msa0236020:CDS
AGGAAAAGATGAATAGTAAA+AGG 0.316506 2_2:+8938990 Msa0236020:intron
TAGTAGGATTCGTTCCAAAA+AGG 0.330593 2_2:+8946010 Msa0236020:CDS
CAGGTGGTTGTGCACCTTGC+TGG 0.333698 2_2:+8938353 Msa0236020:CDS
CGTGGATACTTTCAAGTGTC+TGG 0.346648 2_2:+8946631 Msa0236020:CDS
GAATCTGACATGGATTCATT+TGG 0.366495 2_2:-8940066 None:intergenic
AGACTCTGGTGTGCACATTC+AGG 0.369506 2_2:+8938334 Msa0236020:CDS
GCTGGCAGTGTGCTTGTTGT+GGG 0.380009 2_2:+8938371 Msa0236020:CDS
GCAATTTGTCTGCCTCTTGC+TGG 0.383758 2_2:-8944966 None:intergenic
ATTAAAATGCAGGCAAATGA+TGG 0.389739 2_2:+8945920 Msa0236020:intron
TGCAGTCATTTGACTACTAC+TGG 0.392115 2_2:-8946662 None:intergenic
TGCTGGCAGTGTGCTTGTTG+TGG 0.393351 2_2:+8938370 Msa0236020:CDS
TGTCTTGCATACTGACTACT+TGG 0.409247 2_2:-8946691 None:intergenic
TGTTATTAGCATATTCATAT+AGG 0.413476 2_2:-8940260 None:intergenic
TATATGAATATGCTAATAAC+AGG 0.413623 2_2:+8940262 Msa0236020:CDS
CTTGCCTGTTGTTATTCTGC+AGG 0.420200 2_2:-8945005 None:intergenic
GGTTTGTTCTGGAGGGCATT+TGG 0.420335 2_2:+8938200 Msa0236020:CDS
GCAACAGTAATGGTTTGTTC+TGG 0.420843 2_2:+8938189 None:intergenic
ACTTTCTGCAAAAGAAGAAA+TGG 0.422896 2_2:+8940159 Msa0236020:CDS
GATTCTCCACAGAGAAAGAT+TGG 0.430256 2_2:+8940084 Msa0236020:CDS
ATCTTACTTACACTAATTGA+AGG 0.461453 2_2:-8946726 None:intergenic
GATTCATAGTTTGTGCCTCC+AGG 0.463009 2_2:-8946568 None:intergenic
TGACCTTTGCTCTCAGAAGT+TGG 0.483961 2_2:-8946393 None:intergenic
CAAATGATGGGTGAATCTTT+GGG 0.484707 2_2:+8945933 Msa0236020:CDS
TGCTTCTGAGGCTAATGCTC+AGG 0.489603 2_2:+8944787 Msa0236020:CDS
CCCCTTCCAATCTTTCTCTG+TGG 0.498694 2_2:-8940090 None:intergenic
AAAGCATGTTCAGATTCATC+TGG 0.501079 2_2:+8944755 Msa0236020:CDS
GTAACCTGCAGAATAACAAC+AGG 0.517127 2_2:+8945001 Msa0236020:CDS
ATTAATATGAGTATGTTGCC+TGG 0.522184 2_2:+8946550 Msa0236020:CDS
TACTCATATTAATATTGCTA+TGG 0.537147 2_2:-8946540 None:intergenic
AGTGGAATCACTTGCAAGGT+GGG 0.537973 2_2:+8939016 Msa0236020:CDS
TGGCACTGGATCTGCTTCTG+AGG 0.539441 2_2:+8944775 Msa0236020:CDS
CAACAAGCACACTGCCAGCA+AGG 0.540252 2_2:-8938367 None:intergenic
AGTTGCTGCTTTCTTTGGGG+TGG 0.544395 2_2:+8938424 Msa0236020:CDS
ACAGTAATGGTTTGTTCTGG+AGG 0.545443 2_2:+8938192 None:intergenic
CTCCACAGAGAAAGATTGGA+AGG 0.556965 2_2:+8940088 Msa0236020:CDS
TGTTCAGATTCATCTGGCAC+TGG 0.559407 2_2:+8944761 Msa0236020:CDS
CCACAGAGAAAGATTGGAAG+GGG 0.561133 2_2:+8940090 Msa0236020:CDS
CTTATAGTCTTCTCTAGCCG+TGG 0.565803 2_2:+8940234 Msa0236020:CDS
GGTAGTTGCTGCTTTCTTTG+GGG 0.569703 2_2:+8938421 Msa0236020:CDS
TTAAAATGCAGGCAAATGAT+GGG 0.576296 2_2:+8945921 Msa0236020:intron
GTTCTGGAGGGCATTTGGTG+TGG 0.577056 2_2:+8938205 Msa0236020:CDS
CATATTCATATAGGCGTCCA+CGG 0.581532 2_2:-8940251 None:intergenic
CAGTAATGGTTTGTTCTGGA+GGG 0.589705 2_2:+8938193 None:intergenic
TGTAGATAGCTGAGAGTGAG+AGG 0.601712 2_2:+8946506 Msa0236020:intron
TCTTACTTACACTAATTGAA+GGG 0.612238 2_2:-8946725 None:intergenic
TCCACAGAGAAAGATTGGAA+GGG 0.614919 2_2:+8940089 Msa0236020:CDS
CAGCAGCAATATGAGTCTCG+TGG 0.617440 2_2:+8946613 Msa0236020:CDS
TTTGGGCTCTATGAATGCCA+AGG 0.622758 2_2:+8945950 Msa0236020:CDS
GCACAGTGGAATCACTTGCA+AGG 0.636671 2_2:+8939012 Msa0236020:CDS
CAGTGGAATCACTTGCAAGG+TGG 0.636932 2_2:+8939015 Msa0236020:CDS
TCTCTGTGGAGAATCTGACA+TGG 0.639233 2_2:-8940076 None:intergenic
CAACCAACTTCTGAGAGCAA+AGG 0.640033 2_2:+8946390 Msa0236020:CDS
ACACTAATTGAAGGGACATG+TGG 0.641842 2_2:-8946717 None:intergenic
GTGTCAAAGAAACTATTGCA+AGG 0.654122 2_2:+8944726 Msa0236020:intron
CTCTGGTGTGCACATTCAGG+TGG 0.663722 2_2:+8938337 Msa0236020:CDS
TAATATTGCTATGGTGACTG+TGG 0.672304 2_2:-8946531 None:intergenic
CACAGAGAAAGATTGGAAGG+GGG 0.691435 2_2:+8940091 Msa0236020:CDS
ATGAATAGTAAAAGGCACAG+TGG 0.698307 2_2:+8938998 Msa0236020:CDS
AATATGAGTATGTTGCCTGG+AGG 0.741151 2_2:+8946553 Msa0236020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAATGATTTTAATA+GGG - chr2_2:8939073-8939092 None:intergenic 10.0%
!!! ATTTTGAAAATGATTTTAAT+AGG - chr2_2:8939074-8939093 None:intergenic 10.0%
!! GCAATTTAAAAAAATTAATT+GGG + chr2_2:8941704-8941723 Msa0236020:intron 10.0%
!! TAAATTAAATCAAAATTACT+AGG - chr2_2:8943239-8943258 None:intergenic 10.0%
!!! ACATAATATTTAAAAGTTTT+GGG + chr2_2:8943423-8943442 Msa0236020:intron 10.0%
!!! TAAATAAAAGTATTATTGAA+AGG - chr2_2:8944641-8944660 None:intergenic 10.0%
!! TAAAATATAAGTGTAATTTA+AGG - chr2_2:8945097-8945116 None:intergenic 10.0%
!! AAAAAAAAAATTATTTGTCA+TGG + chr2_2:8945450-8945469 Msa0236020:intron 10.0%
!! AAAAAAAAATTATTTGTCAT+GGG + chr2_2:8945451-8945470 Msa0236020:intron 10.0%
!!! GTGTTTTTTTTTTTTTGAAA+TGG - chr2_2:8938652-8938671 None:intergenic 15.0%
!! ATAACTAAGATATGTATAAA+TGG + chr2_2:8938755-8938774 Msa0236020:intron 15.0%
!! ATAAACAAACTTTACAATAT+AGG + chr2_2:8938933-8938952 Msa0236020:intron 15.0%
!! TAAACAAACTTTACAATATA+GGG + chr2_2:8938934-8938953 Msa0236020:intron 15.0%
!! AGTTAATTTAATTGAGTAAA+AGG + chr2_2:8939282-8939301 Msa0236020:intron 15.0%
!! AATTATTATAAGGATAAAGT+GGG - chr2_2:8939381-8939400 None:intergenic 15.0%
!! AAATTATTATAAGGATAAAG+TGG - chr2_2:8939382-8939401 None:intergenic 15.0%
!! AGATGAATCAAATTATTATA+AGG - chr2_2:8939391-8939410 None:intergenic 15.0%
!! TAAAAAAAAAAAATGGCATT+TGG - chr2_2:8939516-8939535 None:intergenic 15.0%
!!! AATTTTCATTTTTTTCTTGT+TGG + chr2_2:8939972-8939991 Msa0236020:intron 15.0%
!!! AAAATGATACTGATTTTTTT+GGG + chr2_2:8940639-8940658 Msa0236020:intron 15.0%
!! TAATATAAAGAAGAAATTTC+TGG - chr2_2:8940748-8940767 None:intergenic 15.0%
!! GTCAAATTCAAATTAAATAA+AGG + chr2_2:8941462-8941481 Msa0236020:intron 15.0%
!! TTCAAATTAAATAAAGGAAA+AGG + chr2_2:8941468-8941487 Msa0236020:intron 15.0%
!! GGCAATTTAAAAAAATTAAT+TGG + chr2_2:8941703-8941722 Msa0236020:intron 15.0%
!!! GATTAAAGTTGAAATAATTT+TGG + chr2_2:8941799-8941818 Msa0236020:intron 15.0%
!!! AATTGTTTTTCTATATAGAA+GGG - chr2_2:8942052-8942071 None:intergenic 15.0%
!!! AAATTGTTTTTCTATATAGA+AGG - chr2_2:8942053-8942072 None:intergenic 15.0%
!!! TTTTTATTCAGTTTTTTGAT+TGG + chr2_2:8942540-8942559 Msa0236020:intron 15.0%
!! ATGTGTAGAAATTAATAAAA+GGG + chr2_2:8942809-8942828 Msa0236020:intron 15.0%
!!! TTTTTAAACAGTTGTTTTTA+AGG + chr2_2:8942965-8942984 Msa0236020:intron 15.0%
!!! GACATAATATTTAAAAGTTT+TGG + chr2_2:8943422-8943441 Msa0236020:intron 15.0%
!! AAAAAAAAAAAAACCTAGTA+CGG - chr2_2:8943740-8943759 None:intergenic 15.0%
!!! AAGGCAAATATTTTTTTTTA+TGG - chr2_2:8944402-8944421 None:intergenic 15.0%
!!! AAAATATTTGCCTTAATTTT+TGG + chr2_2:8944408-8944427 Msa0236020:intron 15.0%
!! AAACTAATTGATGTATTATA+GGG - chr2_2:8944676-8944695 None:intergenic 15.0%
!!! TTATTTTATAGTAGATAGTT+AGG - chr2_2:8945251-8945270 None:intergenic 15.0%
!! AAATAACAAAATCAATAGAA+AGG + chr2_2:8945330-8945349 Msa0236020:intron 15.0%
!!! AAGTGATTATTTGAAATTTT+TGG + chr2_2:8945503-8945522 Msa0236020:intron 15.0%
!!! ACTACAAAACAAATATTTTA+AGG - chr2_2:8945533-8945552 None:intergenic 15.0%
!!! GAAATTCAATTATTTTTTAG+AGG + chr2_2:8945612-8945631 Msa0236020:intron 15.0%
!! TTATTAATTAACGTAGTTTA+TGG + chr2_2:8945723-8945742 Msa0236020:intron 15.0%
!! CAAATTACAAATTAACTAAA+TGG - chr2_2:8945872-8945891 None:intergenic 15.0%
!!! AAGAAATATATATACCTTTT+TGG - chr2_2:8946027-8946046 None:intergenic 15.0%
!! CCTATAAAAAAATTATAGAA+AGG - chr2_2:8946065-8946084 None:intergenic 15.0%
!!! CCTTTCTATAATTTTTTTAT+AGG + chr2_2:8946062-8946081 Msa0236020:intron 15.0%
!!! TTTTATTTATGGTGCATTTT+CGG - chr2_2:8938852-8938871 None:intergenic 20.0%
!! AAAATGCACCATAAATAAAA+GGG + chr2_2:8938852-8938871 Msa0236020:intron 20.0%
!!! AAAAGAATCCCTTTTATTTA+TGG - chr2_2:8938863-8938882 None:intergenic 20.0%
!!! GAAAATGATTTATTTGTTGT+TGG - chr2_2:8939102-8939121 None:intergenic 20.0%
!! ACATGTATCATTATTGAAAA+TGG - chr2_2:8939223-8939242 None:intergenic 20.0%
!!! TTTTTACATGTGATTAATCA+GGG - chr2_2:8939259-8939278 None:intergenic 20.0%
!!! ATTTTTACATGTGATTAATC+AGG - chr2_2:8939260-8939279 None:intergenic 20.0%
!!! ATTTTTTTCTTTTGGTTTAG+TGG - chr2_2:8939424-8939443 None:intergenic 20.0%
!! ACAAAAGGAGAATATAATTA+AGG - chr2_2:8939677-8939696 None:intergenic 20.0%
!! TGTATGAATGAATGAATATA+TGG - chr2_2:8939946-8939965 None:intergenic 20.0%
!! TGTTATTAGCATATTCATAT+AGG - chr2_2:8940263-8940282 None:intergenic 20.0%
!! TATATGAATATGCTAATAAC+AGG + chr2_2:8940262-8940281 Msa0236020:CDS 20.0%
!!! CAAAATGATACTGATTTTTT+TGG + chr2_2:8940638-8940657 Msa0236020:intron 20.0%
!!! AAATGATACTGATTTTTTTG+GGG + chr2_2:8940640-8940659 Msa0236020:intron 20.0%
!!! TGTTTTTTTAGTTGATTTTG+TGG + chr2_2:8940778-8940797 Msa0236020:intron 20.0%
!! ATAACATAAAAGCTTATAGA+AGG - chr2_2:8940978-8940997 None:intergenic 20.0%
!!! GTTAAGTTTTTTATAGTTCT+TGG + chr2_2:8941082-8941101 Msa0236020:intron 20.0%
!! ACAGAAAAAATTAACAAGAA+TGG - chr2_2:8941226-8941245 None:intergenic 20.0%
!!! AAGGAAAAGGATATTTTTTT+AGG + chr2_2:8941481-8941500 Msa0236020:intron 20.0%
!!! AGGAAAAGGATATTTTTTTA+GGG + chr2_2:8941482-8941501 Msa0236020:intron 20.0%
!! TATATGTAACCCTAAAAATT+AGG + chr2_2:8941672-8941691 Msa0236020:intron 20.0%
!! ATATGTAACCCTAAAAATTA+GGG + chr2_2:8941673-8941692 Msa0236020:intron 20.0%
!!! CAATAAAACCCTAATTTTTA+GGG - chr2_2:8941684-8941703 None:intergenic 20.0%
!!! GAAATAATTTTGGTTGATTT+TGG + chr2_2:8941809-8941828 Msa0236020:intron 20.0%
!! ACTATAGAAGATAAATGTTA+GGG - chr2_2:8942020-8942039 None:intergenic 20.0%
!! AACTATAGAAGATAAATGTT+AGG - chr2_2:8942021-8942040 None:intergenic 20.0%
!! ATTATACTCTATGAATGAAT+TGG - chr2_2:8942079-8942098 None:intergenic 20.0%
!! TATTAATATTTCACCTATGT+TGG + chr2_2:8942168-8942187 Msa0236020:intron 20.0%
!! TCAGAAAAAAACAAAGAAAA+GGG + chr2_2:8942263-8942282 Msa0236020:intron 20.0%
!! CATGTGTAGAAATTAATAAA+AGG + chr2_2:8942808-8942827 Msa0236020:intron 20.0%
!! ATCTTTCAATTTCATTTCAA+AGG - chr2_2:8943099-8943118 None:intergenic 20.0%
!!! TTTGAAATGAAATTGAAAGA+TGG + chr2_2:8943098-8943117 Msa0236020:intron 20.0%
!!! TTTTGTAAATTCATCATAAC+TGG - chr2_2:8943349-8943368 None:intergenic 20.0%
!!! AAATCATTTTGATGACAAAT+TGG + chr2_2:8943366-8943385 Msa0236020:intron 20.0%
!! ACATTAAATTGAAAGATTTG+TGG + chr2_2:8943460-8943479 Msa0236020:intron 20.0%
!! TATATGTGTGTAAATTTCAA+TGG + chr2_2:8944106-8944125 Msa0236020:intron 20.0%
!!! GTATTAGTACTAATTGATTT+CGG + chr2_2:8944177-8944196 Msa0236020:intron 20.0%
!! TTTACGAGAACAAAAAATTA+AGG - chr2_2:8944316-8944335 None:intergenic 20.0%
!!! ATATTTTTTTTTATGGTGTC+CGG - chr2_2:8944395-8944414 None:intergenic 20.0%
!! GAAACTAATTGATGTATTAT+AGG - chr2_2:8944677-8944696 None:intergenic 20.0%
!!! ATAGTTACTTTTTAAGAGAA+TGG - chr2_2:8945138-8945157 None:intergenic 20.0%
!! ATATATTCATAAAAGAAGCT+TGG - chr2_2:8945189-8945208 None:intergenic 20.0%
!! GAAATCTCTTCAAAAAATTT+AGG - chr2_2:8945654-8945673 None:intergenic 20.0%
!! AATTAGAAAAAGGAATTAGT+AGG + chr2_2:8945994-8946013 Msa0236020:CDS 20.0%
!! TACTCATATTAATATTGCTA+TGG - chr2_2:8946543-8946562 None:intergenic 20.0%
!! TCAATTCTATGTTGTTTGTT+GGG + chr2_2:8938502-8938521 Msa0236020:intron 25.0%
! AAAATACATTAAGGGGAAAT+CGG - chr2_2:8938572-8938591 None:intergenic 25.0%
! TGGGAAAAAAATACATTAAG+GGG - chr2_2:8938579-8938598 None:intergenic 25.0%
! GTGGGAAAAAAATACATTAA+GGG - chr2_2:8938580-8938599 None:intergenic 25.0%
! TTGAATTGAATATACTCGAT+TGG - chr2_2:8938701-8938720 None:intergenic 25.0%
! AGTTTCTTACTTCGAATTAA+TGG - chr2_2:8938795-8938814 None:intergenic 25.0%
! AACAATGTGTGTATATTTGT+GGG - chr2_2:8938820-8938839 None:intergenic 25.0%
! GAAAATGCACCATAAATAAA+AGG + chr2_2:8938851-8938870 Msa0236020:intron 25.0%
! AGGAAAAGATGAATAGTAAA+AGG + chr2_2:8938990-8939009 Msa0236020:intron 25.0%
!!! ATGATTTTAATAGGGTGAAA+AGG - chr2_2:8939065-8939084 None:intergenic 25.0%
! ATCTGCAATGAATTAGATTA+GGG - chr2_2:8939151-8939170 None:intergenic 25.0%
! AATCTGCAATGAATTAGATT+AGG - chr2_2:8939152-8939171 None:intergenic 25.0%
! CATGATTAAGTAAATGTCAT+AGG + chr2_2:8939335-8939354 Msa0236020:intron 25.0%
!!! AAGATTGTTTTGTCTGATTA+AGG - chr2_2:8939907-8939926 None:intergenic 25.0%
!!! TTGATTTTTTGTTTTCAGCT+TGG + chr2_2:8940029-8940048 Msa0236020:intron 25.0%
! AAGAAAACTTTGAATCCTTT+AGG - chr2_2:8940290-8940309 None:intergenic 25.0%
! TGATGAACAAAATCTCAAAA+GGG - chr2_2:8940343-8940362 None:intergenic 25.0%
! TTGATGAACAAAATCTCAAA+AGG - chr2_2:8940344-8940363 None:intergenic 25.0%
! AATATAACAGCAGAAAATTG+AGG - chr2_2:8940489-8940508 None:intergenic 25.0%
!!! AATTGATGCTGTTTGTTTTT+AGG + chr2_2:8940511-8940530 Msa0236020:intron 25.0%
! TGATGAACAAAATCTCAAAA+GGG - chr2_2:8940343-8940362 None:intergenic 25.0%
! TTGATGAACAAAATCTCAAA+AGG - chr2_2:8940344-8940363 None:intergenic 25.0%
!!! AATGATACTGATTTTTTTGG+GGG + chr2_2:8940641-8940660 Msa0236020:intron 25.0%
!! AATTCAATTTTCCTTTCTCT+AGG + chr2_2:8940701-8940720 Msa0236020:intron 25.0%
!!! TGCTATTTCTTTTTCTTTGA+AGG + chr2_2:8940831-8940850 Msa0236020:intron 25.0%
!! GTCTTTCATTTCTTCTATTT+TGG + chr2_2:8940946-8940965 Msa0236020:intron 25.0%
!!! TTTTATAGTTCTTGGTTTGT+TGG + chr2_2:8941090-8941109 Msa0236020:intron 25.0%
! GAATTGTGAAAAAGAGAAAA+AGG - chr2_2:8941251-8941270 None:intergenic 25.0%
!!! ATATGACAGCTTTTGTTTTA+GGG - chr2_2:8941335-8941354 None:intergenic 25.0%
!! CCAATAAAACCCTAATTTTT+AGG - chr2_2:8941685-8941704 None:intergenic 25.0%
!!! CCTAAAAATTAGGGTTTTAT+TGG + chr2_2:8941682-8941701 Msa0236020:intron 25.0%
! ACGGATATATGTATTTATGA+AGG + chr2_2:8942230-8942249 Msa0236020:intron 25.0%
! CGGATATATGTATTTATGAA+GGG + chr2_2:8942231-8942250 Msa0236020:intron 25.0%
! CTCAGAAAAAAACAAAGAAA+AGG + chr2_2:8942262-8942281 Msa0236020:intron 25.0%
!!! AGAAAAGGGTTTTTTTTCTT+AGG + chr2_2:8942277-8942296 Msa0236020:intron 25.0%
!!! GAAAAGGGTTTTTTTTCTTA+GGG + chr2_2:8942278-8942297 Msa0236020:intron 25.0%
!!! ATGTTGTCACATTTTTTAGA+TGG + chr2_2:8942492-8942511 Msa0236020:intron 25.0%
!!! TCAAGAGTTTTTTTACTGTT+TGG + chr2_2:8942563-8942582 Msa0236020:intron 25.0%
! AAAATAAAATTTCCCAACTG+AGG - chr2_2:8943543-8943562 None:intergenic 25.0%
!!! TTGACATTGCTACTTAATTT+TGG + chr2_2:8943561-8943580 Msa0236020:intron 25.0%
!!! TGACATTGCTACTTAATTTT+GGG + chr2_2:8943562-8943581 Msa0236020:intron 25.0%
! AACACTATGATTAGATTGAA+GGG - chr2_2:8943791-8943810 None:intergenic 25.0%
! TAACACTATGATTAGATTGA+AGG - chr2_2:8943792-8943811 None:intergenic 25.0%
!!! GTTTTAGAATGATTGCTTTA+AGG - chr2_2:8943849-8943868 None:intergenic 25.0%
! TGATTTGAATTAGTTAGACT+TGG + chr2_2:8943876-8943895 Msa0236020:intron 25.0%
!! CTAAGAGTTTAAAGTAGTTA+TGG + chr2_2:8943926-8943945 Msa0236020:intron 25.0%
! GAAATTTACACACATATAAG+CGG - chr2_2:8944104-8944123 None:intergenic 25.0%
!! TAAACTTAACTCAGTTGATA+TGG + chr2_2:8944332-8944351 Msa0236020:intron 25.0%
! TTCATAATATATGCAAAGTC+CGG + chr2_2:8944359-8944378 Msa0236020:intron 25.0%
!!! TATTTTTTTTTATGGTGTCC+GGG - chr2_2:8944394-8944413 None:intergenic 25.0%
!!! TATTTGCCTTAATTTTTGGA+CGG + chr2_2:8944412-8944431 Msa0236020:intron 25.0%
! AAGAACAGTTCTTAGATTAT+AGG - chr2_2:8944503-8944522 None:intergenic 25.0%
!!! AATGTGTCATGTTTTTTCTT+TGG - chr2_2:8944529-8944548 None:intergenic 25.0%
! ATCATCCAAATAGGAAATTA+AGG - chr2_2:8944566-8944585 None:intergenic 25.0%
! CAATATCTAATCATCCAAAT+AGG - chr2_2:8944575-8944594 None:intergenic 25.0%
! CTATTTGGATGATTAGATAT+TGG + chr2_2:8944573-8944592 Msa0236020:intron 25.0%
! GATCAACAGTAAGTATATAT+TGG + chr2_2:8944854-8944873 Msa0236020:intron 25.0%
! ATATCAACCATTGTTGAAAT+TGG - chr2_2:8944882-8944901 None:intergenic 25.0%
! GGAGAATATATATGAAATCA+TGG - chr2_2:8944939-8944958 None:intergenic 25.0%
! TTCAGTGAATTCAAACATTA+AGG - chr2_2:8945040-8945059 None:intergenic 25.0%
! TGTTTCAAATTATTTGTCTC+TGG + chr2_2:8945353-8945372 Msa0236020:intron 25.0%
!! AATTAGTGATTTGTGTAATG+AGG - chr2_2:8945827-8945846 None:intergenic 25.0%
!!! CATTTTAATCTTTTTCAGCA+AGG - chr2_2:8945909-8945928 None:intergenic 25.0%
! TCATTCTGATGTTGATATTT+GGG - chr2_2:8946164-8946183 None:intergenic 25.0%
! TCAATATAAGCATGAATACA+AGG - chr2_2:8946237-8946256 None:intergenic 25.0%
!! GATACTTCATTTGAAACTTA+GGG - chr2_2:8946323-8946342 None:intergenic 25.0%
!! TGATACTTCATTTGAAACTT+AGG - chr2_2:8946324-8946343 None:intergenic 25.0%
! AAACTATCAAAATTGCACAT+AGG - chr2_2:8946454-8946473 None:intergenic 25.0%
!!! TTTGCAAAGGGATTGTTTTT+TGG + chr2_2:8938400-8938419 Msa0236020:CDS 30.0%
! GTCAATTCTATGTTGTTTGT+TGG + chr2_2:8938501-8938520 Msa0236020:intron 30.0%
! TTTGTTGGGTGGTTTTTATA+GGG + chr2_2:8938516-8938535 Msa0236020:intron 30.0%
GGTGGGAAAAAAATACATTA+AGG - chr2_2:8938581-8938600 None:intergenic 30.0%
TCAATAATCGAAGTCAGTTA+AGG + chr2_2:8938717-8938736 Msa0236020:intron 30.0%
CAACAATGTGTGTATATTTG+TGG - chr2_2:8938821-8938840 None:intergenic 30.0%
CCTGAAGATAAATGTATTTC+TGG - chr2_2:8938973-8938992 None:intergenic 30.0%
CCAGAAATACATTTATCTTC+AGG + chr2_2:8938970-8938989 Msa0236020:intron 30.0%
CTTAATCATGTGTAAACATG+AGG - chr2_2:8939325-8939344 None:intergenic 30.0%
AGCAAAGTGAACATAGAATT+GGG - chr2_2:8939551-8939570 None:intergenic 30.0%
AAGCAAAGTGAACATAGAAT+TGG - chr2_2:8939552-8939571 None:intergenic 30.0%
TATGTTACCAAATCTGAGTT+TGG - chr2_2:8939801-8939820 None:intergenic 30.0%
! TTCTTTTGCAGAAAGTTACT+TGG - chr2_2:8940155-8940174 None:intergenic 30.0%
ACTTTCTGCAAAAGAAGAAA+TGG + chr2_2:8940159-8940178 Msa0236020:CDS 30.0%
TGAGGAACAAAATCTCAAAA+GGG - chr2_2:8940471-8940490 None:intergenic 30.0%
TTGAGGAACAAAATCTCAAA+AGG - chr2_2:8940472-8940491 None:intergenic 30.0%
CAGAAAATAGAGATAGAAAG+AGG - chr2_2:8940910-8940929 None:intergenic 30.0%
! CTTTCTATCTCTATTTTCTG+AGG + chr2_2:8940910-8940929 Msa0236020:intron 30.0%
AATGAAAGACAAGTGTTCTT+TGG - chr2_2:8940936-8940955 None:intergenic 30.0%
GAAATAGAAGTAGCAACAAT+TGG + chr2_2:8941141-8941160 Msa0236020:intron 30.0%
! CAACAATTGGTAAGGATTTT+GGG + chr2_2:8941154-8941173 Msa0236020:intron 30.0%
!!! CATATGACAGCTTTTGTTTT+AGG - chr2_2:8941336-8941355 None:intergenic 30.0%
!! ATGTTATTAAGGAAGTGTCA+AGG - chr2_2:8941387-8941406 None:intergenic 30.0%
GACTAAGTGACATGTTATTA+AGG - chr2_2:8941398-8941417 None:intergenic 30.0%
CTGATATGATCAAATAGTGT+AGG - chr2_2:8941519-8941538 None:intergenic 30.0%
GCAATGAAAAATCCTTATCT+GGG - chr2_2:8941585-8941604 None:intergenic 30.0%
TGCAATGAAAAATCCTTATC+TGG - chr2_2:8941586-8941605 None:intergenic 30.0%
TATGGTTGCAAGTGAAATTT+GGG - chr2_2:8941629-8941648 None:intergenic 30.0%
ATATGGTTGCAAGTGAAATT+TGG - chr2_2:8941630-8941649 None:intergenic 30.0%
!!! GTTGATTTTGGAACCTTTTA+TGG + chr2_2:8941821-8941840 Msa0236020:intron 30.0%
!! TTTGGAACCTTTTATGGAAA+TGG + chr2_2:8941827-8941846 Msa0236020:intron 30.0%
! GAATATGGTTAGGGTTTTTA+AGG + chr2_2:8941858-8941877 Msa0236020:intron 30.0%
TCTTGGTTGAAAAGAATCTT+TGG + chr2_2:8941892-8941911 Msa0236020:intron 30.0%
GTTATGCTAAAAATCTTGCA+CGG + chr2_2:8942211-8942230 Msa0236020:intron 30.0%
AAATTTGAGAACACTCTCAT+TGG - chr2_2:8942392-8942411 None:intergenic 30.0%
!!! ATGAGAGTGTTCTCAAATTT+TGG + chr2_2:8942392-8942411 Msa0236020:intron 30.0%
GTAATAAGCAGAAGTTGAAA+TGG + chr2_2:8942460-8942479 Msa0236020:intron 30.0%
! GAATATTTGAGTCTTATGTG+TGG + chr2_2:8942611-8942630 Msa0236020:intron 30.0%
GATATTACAATGAGACCTTA+GGG + chr2_2:8942646-8942665 Msa0236020:intron 30.0%
GGCATTAACCATTAAGAAAA+GGG + chr2_2:8942667-8942686 Msa0236020:intron 30.0%
!! ACTATTTCTAGGTCACTATT+TGG - chr2_2:8942699-8942718 None:intergenic 30.0%
! TGATTGGTTCAACTATTTCT+AGG - chr2_2:8942710-8942729 None:intergenic 30.0%
TAGTTGAACCAATCATATTG+TGG + chr2_2:8942715-8942734 Msa0236020:intron 30.0%
AGTTGAACCAATCATATTGT+GGG + chr2_2:8942716-8942735 Msa0236020:intron 30.0%
TCATCATGTCAAAATCTGAT+TGG - chr2_2:8942910-8942929 None:intergenic 30.0%
CAGAACATAACCATGAAATA+TGG + chr2_2:8942990-8943009 Msa0236020:intron 30.0%
GTCAAATCATCCATATTTCA+TGG - chr2_2:8943003-8943022 None:intergenic 30.0%
TAACCAAAAAAACTTGTCTC+TGG - chr2_2:8943032-8943051 None:intergenic 30.0%
CTTTACCTTTCACTAAATTC+TGG - chr2_2:8943153-8943172 None:intergenic 30.0%
TTGCGTATGAAACATTACAA+AGG + chr2_2:8943496-8943515 Msa0236020:intron 30.0%
!! GACATTGCTACTTAATTTTG+GGG + chr2_2:8943563-8943582 Msa0236020:intron 30.0%
!! ACATTGCTACTTAATTTTGG+GGG + chr2_2:8943564-8943583 Msa0236020:intron 30.0%
ACACTATGATTAGATTGAAG+GGG - chr2_2:8943790-8943809 None:intergenic 30.0%
!! ATGATTGCTTTAAGGATTCT+AGG - chr2_2:8943841-8943860 None:intergenic 30.0%
AAAGTAGTTATGGAGTTAAG+AGG + chr2_2:8943936-8943955 Msa0236020:intron 30.0%
! TAAAAATTTCGGCATTTTGC+TGG - chr2_2:8944042-8944061 None:intergenic 30.0%
!! AAATGCCGAAATTTTTAAGC+CGG + chr2_2:8944045-8944064 Msa0236020:intron 30.0%
!! CAAATGATAAAAGTGTTTGC+GGG - chr2_2:8944293-8944312 None:intergenic 30.0%
!! GCAAATGATAAAAGTGTTTG+CGG - chr2_2:8944294-8944313 None:intergenic 30.0%
TCATAATATATGCAAAGTCC+GGG + chr2_2:8944360-8944379 Msa0236020:intron 30.0%
!!! ATTTTTTTTTATGGTGTCCG+GGG - chr2_2:8944393-8944412 None:intergenic 30.0%
!! ATTTGCCTTAATTTTTGGAC+GGG + chr2_2:8944413-8944432 Msa0236020:intron 30.0%
TAGATTATAGGTGTTTGGTT+GGG - chr2_2:8944491-8944510 None:intergenic 30.0%
TTAGATTATAGGTGTTTGGT+TGG - chr2_2:8944492-8944511 None:intergenic 30.0%
GTTCTTAGATTATAGGTGTT+TGG - chr2_2:8944496-8944515 None:intergenic 30.0%
AAAACATGACACATTGAGAT+AGG + chr2_2:8944534-8944553 Msa0236020:intron 30.0%
AAACATGACACATTGAGATA+GGG + chr2_2:8944535-8944554 Msa0236020:intron 30.0%
AACCTCCTTAATTTCCTATT+TGG + chr2_2:8944558-8944577 Msa0236020:intron 30.0%
ATCCAAATAGGAAATTAAGG+AGG - chr2_2:8944563-8944582 None:intergenic 30.0%
TTTGGATGATTAGATATTGG+AGG + chr2_2:8944576-8944595 Msa0236020:intron 30.0%
CTGCAATGATTAAAATGTTC+AGG - chr2_2:8944707-8944726 None:intergenic 30.0%
CTTACTGTTGATCAAATTGA+AGG - chr2_2:8944847-8944866 None:intergenic 30.0%
ATTGGATCCAATTTCAACAA+TGG + chr2_2:8944872-8944891 Msa0236020:intron 30.0%
! TAGGTAGAATGTTCTTTTGT+TGG + chr2_2:8945401-8945420 Msa0236020:intron 30.0%
! TCATTTTACAACTCATTTCG+AGG + chr2_2:8945746-8945765 Msa0236020:intron 30.0%
! CATTTTACAACTCATTTCGA+GGG + chr2_2:8945747-8945766 Msa0236020:intron 30.0%
! ATTTTACAACTCATTTCGAG+GGG + chr2_2:8945748-8945767 Msa0236020:intron 30.0%
!! AGTTTGACCTTTTAACTCAA+GGG - chr2_2:8945786-8945805 None:intergenic 30.0%
! TGATTTGTGTAATGAGGTAT+CGG - chr2_2:8945821-8945840 None:intergenic 30.0%
GCTGAAAAAGATTAAAATGC+AGG + chr2_2:8945910-8945929 Msa0236020:intron 30.0%
ATTAAAATGCAGGCAAATGA+TGG + chr2_2:8945920-8945939 Msa0236020:intron 30.0%
TTAAAATGCAGGCAAATGAT+GGG + chr2_2:8945921-8945940 Msa0236020:intron 30.0%
CTGGAGTCTAAATTAGAAAA+AGG + chr2_2:8945984-8946003 Msa0236020:CDS 30.0%
!! TTATAGAAAGGACTAGTTGA+TGG - chr2_2:8946053-8946072 None:intergenic 30.0%
CTCATTCTGATGTTGATATT+TGG - chr2_2:8946165-8946184 None:intergenic 30.0%
AAATTGAATACATGCAGAAG+AGG + chr2_2:8946198-8946217 Msa0236020:intron 30.0%
AATTGAATACATGCAGAAGA+GGG + chr2_2:8946199-8946218 Msa0236020:intron 30.0%
TTAACTTAAATGTACACAGC+AGG + chr2_2:8946348-8946367 Msa0236020:intron 30.0%
! TGATAGTTTCAAGTGTCTTA+TGG + chr2_2:8946465-8946484 Msa0236020:intron 30.0%
!!! GTCTTATGGTTTGTTGATTT+TGG + chr2_2:8946479-8946498 Msa0236020:intron 30.0%
ATTAATATGAGTATGTTGCC+TGG + chr2_2:8946550-8946569 Msa0236020:CDS 30.0%
! TGTTCAGCTAGTTTCTTATG+CGG + chr2_2:8938252-8938271 Msa0236020:intron 35.0%
!!! TTGTGGGTTTTGTTTTGCAA+AGG + chr2_2:8938387-8938406 Msa0236020:CDS 35.0%
!!! TGTGGGTTTTGTTTTGCAAA+GGG + chr2_2:8938388-8938407 Msa0236020:CDS 35.0%
AAACAACATAGAATTGACGC+TGG - chr2_2:8938499-8938518 None:intergenic 35.0%
! ATTCTATGTTGTTTGTTGGG+TGG + chr2_2:8938505-8938524 Msa0236020:intron 35.0%
!! GTTTGTTGGGTGGTTTTTAT+AGG + chr2_2:8938515-8938534 Msa0236020:intron 35.0%
! TTGTTGGGTGGTTTTTATAG+GGG + chr2_2:8938517-8938536 Msa0236020:intron 35.0%
! ATGAATAGTAAAAGGCACAG+TGG + chr2_2:8938998-8939017 Msa0236020:CDS 35.0%
TAATAGGGTGAAAAGGACAT+GGG - chr2_2:8939058-8939077 None:intergenic 35.0%
TTAATAGGGTGAAAAGGACA+TGG - chr2_2:8939059-8939078 None:intergenic 35.0%
GCATTATAAAGAGAGAGATG+AGG - chr2_2:8939129-8939148 None:intergenic 35.0%
TTTCACTCCAAACTCAGATT+TGG + chr2_2:8939791-8939810 Msa0236020:intron 35.0%
GAATCTGACATGGATTCATT+TGG - chr2_2:8940069-8940088 None:intergenic 35.0%
TGCTAATAACAGGTACCTAA+AGG + chr2_2:8940272-8940291 Msa0236020:intron 35.0%
! TCTGGAACAAAATCTCCAAA+GGG - chr2_2:8940730-8940749 None:intergenic 35.0%
!! TTCTGGAACAAAATCTCCAA+AGG - chr2_2:8940731-8940750 None:intergenic 35.0%
GAAATAGCATACAAGCACAT+AGG - chr2_2:8940820-8940839 None:intergenic 35.0%
! GTTTGTTGGATACATAGATC+TGG + chr2_2:8941104-8941123 Msa0236020:intron 35.0%
AGAAGTAGCAACAATTGGTA+AGG + chr2_2:8941146-8941165 Msa0236020:intron 35.0%
! GCAACAATTGGTAAGGATTT+TGG + chr2_2:8941153-8941172 Msa0236020:intron 35.0%
GAATAATCGATACCCAGATA+AGG + chr2_2:8941570-8941589 Msa0236020:intron 35.0%
ATGGTTGCAAGTGAAATTTG+GGG - chr2_2:8941628-8941647 None:intergenic 35.0%
GGGTTACATATATTTGACCT+AGG - chr2_2:8941664-8941683 None:intergenic 35.0%
CCAAACACCATTTCCATAAA+AGG - chr2_2:8941837-8941856 None:intergenic 35.0%
! CCTTTTATGGAAATGGTGTT+TGG + chr2_2:8941834-8941853 Msa0236020:intron 35.0%
! GAAATGGTGTTTGGTGAATA+TGG + chr2_2:8941843-8941862 Msa0236020:intron 35.0%
! GTGTTTGGTGAATATGGTTA+GGG + chr2_2:8941849-8941868 Msa0236020:intron 35.0%
TTAAGGACTAGGATTTGTCT+TGG + chr2_2:8941875-8941894 Msa0236020:intron 35.0%
ATGTCATGATTTCCCATTCT+TGG + chr2_2:8941968-8941987 Msa0236020:intron 35.0%
GATAAATGTTAGGGCTCAAA+TGG - chr2_2:8942011-8942030 None:intergenic 35.0%
GCTAGTTCAGTGATTCTTAT+TGG - chr2_2:8942142-8942161 None:intergenic 35.0%
!!! TTTTGGCTTGTTCCATGTAA+TGG + chr2_2:8942409-8942428 Msa0236020:intron 35.0%
!! TTTGGCTTGTTCCATGTAAT+GGG + chr2_2:8942410-8942429 Msa0236020:intron 35.0%
TAAGCAGAAGTTGAAATGGA+CGG + chr2_2:8942464-8942483 Msa0236020:intron 35.0%
GGATATTACAATGAGACCTT+AGG + chr2_2:8942645-8942664 Msa0236020:intron 35.0%
TCTTAATGGTTAATGCCCTA+AGG - chr2_2:8942664-8942683 None:intergenic 35.0%
GGGCATTAACCATTAAGAAA+AGG + chr2_2:8942666-8942685 Msa0236020:intron 35.0%
! GGATCAAACCCTTTTCTTAA+TGG - chr2_2:8942678-8942697 None:intergenic 35.0%
ACAAGATCCCACAATATGAT+TGG - chr2_2:8942726-8942745 None:intergenic 35.0%
ATGACTGAGAATGAGATCAT+TGG + chr2_2:8942926-8942945 Msa0236020:intron 35.0%
AAAAACTTGTCTCTGGTTGA+TGG - chr2_2:8943025-8943044 None:intergenic 35.0%
!!! CAACCAGAGACAAGTTTTTT+TGG + chr2_2:8943026-8943045 Msa0236020:intron 35.0%
! CATTTTTGCGTGTAAGTCTT+AGG - chr2_2:8943267-8943286 None:intergenic 35.0%
!!! GTCACAACTGCAGAATTTTT+TGG + chr2_2:8943588-8943607 Msa0236020:intron 35.0%
CTCTGTAAATGAGAGAAGAA+AGG + chr2_2:8943624-8943643 Msa0236020:intron 35.0%
AAAAACCTAGTACGGATGAA+GGG - chr2_2:8943732-8943751 None:intergenic 35.0%
AAAAAACCTAGTACGGATGA+AGG - chr2_2:8943733-8943752 None:intergenic 35.0%
GAAGAAAGAGTTAACTCACT+TGG + chr2_2:8943898-8943917 Msa0236020:intron 35.0%
TTAGAGCAAAGAATCGAAGT+CGG - chr2_2:8943964-8943983 None:intergenic 35.0%
ATTTACACACATATAAGCGG+AGG - chr2_2:8944101-8944120 None:intergenic 35.0%
CATAATATATGCAAAGTCCG+GGG + chr2_2:8944361-8944380 Msa0236020:intron 35.0%
TTCAACCCGTCCAAAAATTA+AGG - chr2_2:8944421-8944440 None:intergenic 35.0%
ATGATTAGATATTGGAGGCT+AGG + chr2_2:8944581-8944600 Msa0236020:intron 35.0%
GTGTCAAAGAAACTATTGCA+AGG + chr2_2:8944726-8944745 Msa0236020:intron 35.0%
AAAGCATGTTCAGATTCATC+TGG + chr2_2:8944755-8944774 Msa0236020:CDS 35.0%
!! GAGTTTGACCTTTTAACTCA+AGG - chr2_2:8945787-8945806 None:intergenic 35.0%
!! CAAATGATGGGTGAATCTTT+GGG + chr2_2:8945933-8945952 Msa0236020:CDS 35.0%
TAGTAGGATTCGTTCCAAAA+AGG + chr2_2:8946010-8946029 Msa0236020:CDS 35.0%
AAGAAAGAGTCAGAAAATGC+GGG - chr2_2:8946121-8946140 None:intergenic 35.0%
GAAGAAAGAGTCAGAAAATG+CGG - chr2_2:8946122-8946141 None:intergenic 35.0%
TAATATTGCTATGGTGACTG+TGG - chr2_2:8946534-8946553 None:intergenic 35.0%
! AGCTAGTTTCTTATGCGGTT+GGG + chr2_2:8938257-8938276 Msa0236020:intron 40.0%
!!! TGTGGTTTTTGAGACTTGCT+AGG + chr2_2:8938298-8938317 Msa0236020:intron 40.0%
!! TTGGTAGTTGCTGCTTTCTT+TGG + chr2_2:8938419-8938438 Msa0236020:CDS 40.0%
!! TGGTAGTTGCTGCTTTCTTT+GGG + chr2_2:8938420-8938439 Msa0236020:CDS 40.0%
TTTATCGAGCCACGTTTGTA+CGG + chr2_2:8938543-8938562 Msa0236020:intron 40.0%
CCTTTGTGTGAGGAAACAAA+AGG - chr2_2:8939692-8939711 None:intergenic 40.0%
!! CCTTTTGTTTCCTCACACAA+AGG + chr2_2:8939689-8939708 Msa0236020:intron 40.0%
TTCACACTAACCTTTGTGTG+AGG - chr2_2:8939702-8939721 None:intergenic 40.0%
AAGAGATGAAGCAGTGAGAA+TGG - chr2_2:8939753-8939772 None:intergenic 40.0%
! TCTCACTGCTTCATCTCTTT+TGG + chr2_2:8939754-8939773 Msa0236020:intron 40.0%
! CTCACTGCTTCATCTCTTTT+GGG + chr2_2:8939755-8939774 Msa0236020:intron 40.0%
! TGTTTTCAGCTTGGAAGCTA+TGG + chr2_2:8940038-8940057 Msa0236020:intron 40.0%
GATTCTCCACAGAGAAAGAT+TGG + chr2_2:8940084-8940103 Msa0236020:CDS 40.0%
TCCACAGAGAAAGATTGGAA+GGG + chr2_2:8940089-8940108 Msa0236020:CDS 40.0%
CATATTCATATAGGCGTCCA+CGG - chr2_2:8940254-8940273 None:intergenic 40.0%
! AAGAATGGTGTGTGAGTTGA+AGG - chr2_2:8941211-8941230 None:intergenic 40.0%
! GAAGTGTCAAGGAGATAGAT+GGG - chr2_2:8941376-8941395 None:intergenic 40.0%
! CATGTCACTTAGTCTCTTCA+AGG + chr2_2:8941404-8941423 Msa0236020:intron 40.0%
CCTAGGCTTAGATCTTGATA+TGG - chr2_2:8941647-8941666 None:intergenic 40.0%
CCATATCAAGATCTAAGCCT+AGG + chr2_2:8941644-8941663 Msa0236020:intron 40.0%
! GGTGTTTGGTGAATATGGTT+AGG + chr2_2:8941848-8941867 Msa0236020:intron 40.0%
!! GGTTAGGGTTTTTAAGGACT+AGG + chr2_2:8941864-8941883 Msa0236020:intron 40.0%
TCAGTGTGAGATACCAACAT+AGG - chr2_2:8942184-8942203 None:intergenic 40.0%
GTGTTACGTTTCCCATTACA+TGG - chr2_2:8942424-8942443 None:intergenic 40.0%
GACGACCAGAATTTAGTGAA+AGG + chr2_2:8943145-8943164 Msa0236020:intron 40.0%
TAGAGCAAAGAATCGAAGTC+GGG - chr2_2:8943963-8943982 None:intergenic 40.0%
GGTGTCCGGCTTAAAAATTT+CGG - chr2_2:8944053-8944072 None:intergenic 40.0%
GTAACCTGCAGAATAACAAC+AGG + chr2_2:8945001-8945020 Msa0236020:CDS 40.0%
AGAACATTCTACCTAGCACA+AGG - chr2_2:8945396-8945415 None:intergenic 40.0%
!! TGACCTTTTAACTCAAGGGA+CGG - chr2_2:8945782-8945801 None:intergenic 40.0%
!! GCAAATGATGGGTGAATCTT+TGG + chr2_2:8945932-8945951 Msa0236020:CDS 40.0%
TGCCAAGGAACTGAAAAATC+TGG + chr2_2:8945965-8945984 Msa0236020:CDS 40.0%
!! CTCCAGATTTTTCAGTTCCT+TGG - chr2_2:8945970-8945989 None:intergenic 40.0%
AATATGAGTATGTTGCCTGG+AGG + chr2_2:8946553-8946572 Msa0236020:CDS 40.0%
TGCAGTCATTTGACTACTAC+TGG - chr2_2:8946665-8946684 None:intergenic 40.0%
! TGTCTTGCATACTGACTACT+TGG - chr2_2:8946694-8946713 None:intergenic 40.0%
ACACTAATTGAAGGGACATG+TGG - chr2_2:8946720-8946739 None:intergenic 40.0%
!! TGGTCTTGCTCTTTTGCTTC+TGG + chr2_2:8938225-8938244 Msa0236020:CDS 45.0%
! CAGCTAGTTTCTTATGCGGT+TGG + chr2_2:8938256-8938275 Msa0236020:intron 45.0%
!! TATGCGGTTGGGTTTTGTAC+AGG + chr2_2:8938268-8938287 Msa0236020:intron 45.0%
!!! TGAGACTTGCTAGGTTTTGC+TGG + chr2_2:8938307-8938326 Msa0236020:intron 45.0%
!! GGTAGTTGCTGCTTTCTTTG+GGG + chr2_2:8938421-8938440 Msa0236020:CDS 45.0%
!!! GCTTTCTTTGGGGTGGTTTT+TGG + chr2_2:8938431-8938450 Msa0236020:CDS 45.0%
!!! TGGTTTTTGGTGTTGACGCA+GGG + chr2_2:8938444-8938463 Msa0236020:CDS 45.0%
AGTGGAATCACTTGCAAGGT+GGG + chr2_2:8939016-8939035 Msa0236020:CDS 45.0%
TCTCTGTGGAGAATCTGACA+TGG - chr2_2:8940079-8940098 None:intergenic 45.0%
CTCCACAGAGAAAGATTGGA+AGG + chr2_2:8940088-8940107 Msa0236020:CDS 45.0%
CCACAGAGAAAGATTGGAAG+GGG + chr2_2:8940090-8940109 Msa0236020:CDS 45.0%
CACAGAGAAAGATTGGAAGG+GGG + chr2_2:8940091-8940110 Msa0236020:CDS 45.0%
GGGGGAAGATTGAGATCAAA+AGG + chr2_2:8940109-8940128 Msa0236020:CDS 45.0%
CTTATAGTCTTCTCTAGCCG+TGG + chr2_2:8940234-8940253 Msa0236020:CDS 45.0%
CCAAAGGGTTTCCTAGAGAA+AGG - chr2_2:8940715-8940734 None:intergenic 45.0%
! CCTTTCTCTAGGAAACCCTT+TGG + chr2_2:8940712-8940731 Msa0236020:intron 45.0%
!! GATAGATGGGTTGGGCTAAT+TGG - chr2_2:8941363-8941382 None:intergenic 45.0%
! GTCAAGGAGATAGATGGGTT+GGG - chr2_2:8941371-8941390 None:intergenic 45.0%
TGTCAAGGAGATAGATGGGT+TGG - chr2_2:8941372-8941391 None:intergenic 45.0%
!! GGAAGTGTCAAGGAGATAGA+TGG - chr2_2:8941377-8941396 None:intergenic 45.0%
GGGAAAGGAGAACCAAGAAT+GGG - chr2_2:8941983-8942002 None:intergenic 45.0%
TTAGGGCTCAAATGGAAGAG+GGG - chr2_2:8942003-8942022 None:intergenic 45.0%
GTTAGGGCTCAAATGGAAGA+GGG - chr2_2:8942004-8942023 None:intergenic 45.0%
TGTTAGGGCTCAAATGGAAG+AGG - chr2_2:8942005-8942024 None:intergenic 45.0%
TTGAAGTGAGTGAGTGAGTG+AGG + chr2_2:8942325-8942344 Msa0236020:intron 45.0%
GAGTGAGTGAGTGAGGTAAA+TGG + chr2_2:8942332-8942351 Msa0236020:intron 45.0%
GTGAGTGAGGTAAATGGTAG+TGG + chr2_2:8942338-8942357 Msa0236020:intron 45.0%
GTCTTATGTGTGGTTCATCG+AGG + chr2_2:8942621-8942640 Msa0236020:intron 45.0%
TTATGTGTGGTTCATCGAGG+TGG + chr2_2:8942624-8942643 Msa0236020:intron 45.0%
AATGTCCTCGAGCAACTGAT+TGG - chr2_2:8942768-8942787 None:intergenic 45.0%
TCAGTTGCTCGAGGACATTA+AGG + chr2_2:8942769-8942788 Msa0236020:intron 45.0%
AGAACATGCTGACCTCAGTT+GGG + chr2_2:8943528-8943547 Msa0236020:intron 45.0%
CATTTCCCTTCATCCGTACT+AGG + chr2_2:8943724-8943743 Msa0236020:intron 45.0%
!! GGCATTTTGCTGGTTGAACT+AGG - chr2_2:8944032-8944051 None:intergenic 45.0%
! ACACATATAAGCGGAGGTGT+CGG - chr2_2:8944095-8944114 None:intergenic 45.0%
TGTTCAGATTCATCTGGCAC+TGG + chr2_2:8944761-8944780 Msa0236020:CDS 45.0%
! TCTCCAGTTTTACCAGCAAG+AGG + chr2_2:8944954-8944973 Msa0236020:intron 45.0%
! CTTGCCTGTTGTTATTCTGC+AGG - chr2_2:8945008-8945027 None:intergenic 45.0%
TTGTCTCTGGCATTCTACCT+CGG + chr2_2:8945366-8945385 Msa0236020:intron 45.0%
AACTCATTTCGAGGGGATTG+AGG + chr2_2:8945755-8945774 Msa0236020:intron 45.0%
TTTGGGCTCTATGAATGCCA+AGG + chr2_2:8945950-8945969 Msa0236020:CDS 45.0%
! CAACCAACTTCTGAGAGCAA+AGG + chr2_2:8946390-8946409 Msa0236020:CDS 45.0%
TGACCTTTGCTCTCAGAAGT+TGG - chr2_2:8946396-8946415 None:intergenic 45.0%
TGTAGATAGCTGAGAGTGAG+AGG + chr2_2:8946506-8946525 Msa0236020:intron 45.0%
! GATTCATAGTTTGTGCCTCC+AGG - chr2_2:8946571-8946590 None:intergenic 45.0%
! CGTGGATACTTTCAAGTGTC+TGG + chr2_2:8946631-8946650 Msa0236020:CDS 45.0%
!!! TTTTATTAATTTTTTTCTTT+TGG - chr2_2:8939432-8939451 None:intergenic 5.0%
!! ATAAAGTTAAAAAAAAAAAA+TGG - chr2_2:8939523-8939542 None:intergenic 5.0%
!!! TAAAATAATATATCTAATTT+TGG - chr2_2:8942866-8942885 None:intergenic 5.0%
!!! ACTAATTTAATTTTAAAATT+AGG + chr2_2:8945686-8945705 Msa0236020:intron 5.0%
!!! CTAATTTAATTTTAAAATTA+GGG + chr2_2:8945687-8945706 Msa0236020:intron 5.0%
!! GGTTTGTTCTGGAGGGCATT+TGG + chr2_2:8938200-8938219 Msa0236020:CDS 50.0%
! GTTTTGCTGGCAGAAGACTC+TGG + chr2_2:8938320-8938339 Msa0236020:intron 50.0%
AGACTCTGGTGTGCACATTC+AGG + chr2_2:8938334-8938353 Msa0236020:CDS 50.0%
!! AGTTGCTGCTTTCTTTGGGG+TGG + chr2_2:8938424-8938443 Msa0236020:CDS 50.0%
!!! GTGGTTTTTGGTGTTGACGC+AGG + chr2_2:8938443-8938462 Msa0236020:CDS 50.0%
!!! GGTTTTTGGTGTTGACGCAG+GGG + chr2_2:8938445-8938464 Msa0236020:CDS 50.0%
AATCGGTTGCCGTACAAACG+TGG - chr2_2:8938555-8938574 None:intergenic 50.0%
CAAGGCGCACTAATAAGCTC+GGG - chr2_2:8938602-8938621 None:intergenic 50.0%
GCAAGGCGCACTAATAAGCT+CGG - chr2_2:8938603-8938622 None:intergenic 50.0%
GCTTATTAGTGCGCCTTGCA+CGG + chr2_2:8938604-8938623 Msa0236020:intron 50.0%
CTTATTAGTGCGCCTTGCAC+GGG + chr2_2:8938605-8938624 Msa0236020:intron 50.0%
GCACAGTGGAATCACTTGCA+AGG + chr2_2:8939012-8939031 Msa0236020:CDS 50.0%
CAGTGGAATCACTTGCAAGG+TGG + chr2_2:8939015-8939034 Msa0236020:CDS 50.0%
TGATTAATCAGGGATCGCGC+AGG - chr2_2:8939249-8939268 None:intergenic 50.0%
CCCCTTCCAATCTTTCTCTG+TGG - chr2_2:8940093-8940112 None:intergenic 50.0%
! GGTGTGTGAGTTGAAGGAAG+TGG - chr2_2:8941205-8941224 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + chr2_2:8941294-8941313 Msa0236020:intron 50.0%
GGGGAAAGGAGAACCAAGAA+TGG - chr2_2:8941984-8942003 None:intergenic 50.0%
GCTCAAATGGAAGAGGGGAA+AGG - chr2_2:8941998-8942017 None:intergenic 50.0%
GATAGCCAATCAGTTGCTCG+AGG + chr2_2:8942760-8942779 Msa0236020:intron 50.0%
CAGAACATGCTGACCTCAGT+TGG + chr2_2:8943527-8943546 Msa0236020:intron 50.0%
!! ACATATAAGCGGAGGTGTCG+GGG - chr2_2:8944093-8944112 None:intergenic 50.0%
!! CACATATAAGCGGAGGTGTC+GGG - chr2_2:8944094-8944113 None:intergenic 50.0%
!! TGCTTCTGAGGCTAATGCTC+AGG + chr2_2:8944787-8944806 Msa0236020:CDS 50.0%
CTGCCTCTTGCTGGTAAAAC+TGG - chr2_2:8944960-8944979 None:intergenic 50.0%
GCAATTTGTCTGCCTCTTGC+TGG - chr2_2:8944969-8944988 None:intergenic 50.0%
GGTCCGTCCCTTGAGTTAAA+AGG + chr2_2:8945776-8945795 Msa0236020:intron 50.0%
CAGCAGCAATATGAGTCTCG+TGG + chr2_2:8946613-8946632 Msa0236020:CDS 50.0%
!! GTTCTGGAGGGCATTTGGTG+TGG + chr2_2:8938205-8938224 Msa0236020:CDS 55.0%
!! GCGGTTGGGTTTTGTACAGG+CGG + chr2_2:8938271-8938290 Msa0236020:intron 55.0%
!! TTGGGTTTTGTACAGGCGGC+TGG + chr2_2:8938275-8938294 Msa0236020:intron 55.0%
! TTTTGTACAGGCGGCTGGTG+TGG + chr2_2:8938280-8938299 Msa0236020:intron 55.0%
CTCTGGTGTGCACATTCAGG+TGG + chr2_2:8938337-8938356 Msa0236020:CDS 55.0%
CAACAAGCACACTGCCAGCA+AGG - chr2_2:8938370-8938389 None:intergenic 55.0%
! TGCTGGCAGTGTGCTTGTTG+TGG + chr2_2:8938370-8938389 Msa0236020:CDS 55.0%
!! GCTGGCAGTGTGCTTGTTGT+GGG + chr2_2:8938371-8938390 Msa0236020:CDS 55.0%
! TTGACGCAGGGGTATGCTAC+TGG + chr2_2:8938456-8938475 Msa0236020:intron 55.0%
GCGCACTAATAAGCTCGGGT+GGG - chr2_2:8938598-8938617 None:intergenic 55.0%
TTAACCAACGAGCCCGTGCA+AGG - chr2_2:8938620-8938639 None:intergenic 55.0%
ATTGGCTATCACTGCCACGC+TGG - chr2_2:8942750-8942769 None:intergenic 55.0%
!! CATATAAGCGGAGGTGTCGG+GGG - chr2_2:8944092-8944111 None:intergenic 55.0%
AAAGTCCGGGGTTCAAACCC+CGG + chr2_2:8944373-8944392 Msa0236020:intron 55.0%
! TGGCACTGGATCTGCTTCTG+AGG + chr2_2:8944775-8944794 Msa0236020:CDS 55.0%
CAGGTGGTTGTGCACCTTGC+TGG + chr2_2:8938353-8938372 Msa0236020:CDS 60.0%
GGCGCACTAATAAGCTCGGG+TGG - chr2_2:8938599-8938618 None:intergenic 60.0%
TGTGGGATCTTGTGCCAGCG+TGG + chr2_2:8942733-8942752 Msa0236020:intron 60.0%
TTAAGCCGGACACCGTGCTC+AGG + chr2_2:8944059-8944078 Msa0236020:intron 60.0%
CGAATCCTGAGCACGGTGTC+CGG - chr2_2:8944067-8944086 None:intergenic 60.0%
GGGGGTTCGAATCCTGAGCA+CGG - chr2_2:8944074-8944093 None:intergenic 60.0%
ACCTCGGCACACCTTGTGCT+AGG + chr2_2:8945382-8945401 Msa0236020:intron 60.0%
ACCTAGCACAAGGTGTGCCG+AGG - chr2_2:8945386-8945405 None:intergenic 60.0%
GGTGTCCGGGGTTTGAACCC+CGG - chr2_2:8944381-8944400 None:intergenic 65.0%
TGCGCCTTGCACGGGCTCGT+TGG + chr2_2:8938613-8938632 Msa0236020:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 8938198 8946741 8938198 ID=Msa0236020;Name=Msa0236020
chr2_2 mRNA 8938198 8946741 8938198 ID=Msa0236020-mRNA-1;Parent=Msa0236020;Name=Msa0236020-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.25|0.11|0.66|1|1|9|0|335
chr2_2 exon 8938198 8938246 8938198 ID=Msa0236020-mRNA-1:exon:3894;Parent=Msa0236020-mRNA-1
chr2_2 exon 8938333 8938466 8938333 ID=Msa0236020-mRNA-1:exon:3895;Parent=Msa0236020-mRNA-1
chr2_2 exon 8938992 8939059 8938992 ID=Msa0236020-mRNA-1:exon:3896;Parent=Msa0236020-mRNA-1
chr2_2 exon 8940047 8940283 8940047 ID=Msa0236020-mRNA-1:exon:3897;Parent=Msa0236020-mRNA-1
chr2_2 exon 8944727 8944808 8944727 ID=Msa0236020-mRNA-1:exon:3898;Parent=Msa0236020-mRNA-1
chr2_2 exon 8944961 8945022 8944961 ID=Msa0236020-mRNA-1:exon:3899;Parent=Msa0236020-mRNA-1
chr2_2 exon 8945932 8946031 8945932 ID=Msa0236020-mRNA-1:exon:3900;Parent=Msa0236020-mRNA-1
chr2_2 exon 8946367 8946411 8946367 ID=Msa0236020-mRNA-1:exon:3901;Parent=Msa0236020-mRNA-1
chr2_2 exon 8946511 8946741 8946511 ID=Msa0236020-mRNA-1:exon:3902;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8938198 8938246 8938198 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8938333 8938466 8938333 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8938992 8939059 8938992 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8940047 8940283 8940047 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8944727 8944808 8944727 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8944961 8945022 8944961 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8945932 8946031 8945932 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8946367 8946411 8946367 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
chr2_2 CDS 8946511 8946741 8946511 ID=Msa0236020-mRNA-1:cds;Parent=Msa0236020-mRNA-1
Gene Sequence

>Msa0236020

ATGGTTTGTTCTGGAGGGCATTTGGTGTGGTCTTGCTCTTTTGCTTCTGAAGACTCTGGTGTGCACATTCAGGTGGTTGTGCACCTTGCTGGCAGTGTGCTTGTTGTGGGTTTTGTTTTGCAAAGGGATTGTTTTTTGGTAGTTGCTGCTTTCTTTGGGGTGGTTTTTGGTGTTGACGCAGGGGAAAAGATGAATAGTAAAAGGCACAGTGGAATCACTTGCAAGGTGGGAAGTTCACAACTTAGTCCCATCTTGGAAGCTATGGATTTTCCAAATGAATCCATGTCAGATTCTCCACAGAGAAAGATTGGAAGGGGGAAGATTGAGATCAAAAGGATTGAAAACACGACGAATCGCCAAGTAACTTTCTGCAAAAGAAGAAATGGTTTGTTGAAAAAAGCATATGAACTATCTGTTCTTTGTGATGCTGAAGTTGCTCTTATAGTCTTCTCTAGCCGTGGACGCCTATATGAATATGCTAATAACAGTGTCAAAGAAACTATTGCAAGGTACAAAAAAGCATGTTCAGATTCATCTGGCACTGGATCTGCTTCTGAGGCTAATGCTCAGTTTTACCAGCAAGAGGCAGACAAATTGCGTGTGCAAATTAGTAACCTGCAGAATAACAACAGGCAAATGATGGGTGAATCTTTGGGCTCTATGAATGCCAAGGAACTGAAAAATCTGGAGTCTAAATTAGAAAAAGGAATTAGTAGGATTCGTTCCAAAAAGCAGGAGATAGACTTGCACAATAACAACCAACTTCTGAGAGCAAAGATAGCTGAGAGTGAGAGGAACCACAGTCACCATAGCAATATTAATATGAGTATGTTGCCTGGAGGCACAAACTATGAATCTATGCAGTCTCAGAATCAGCAGCAGCAGCAATATGAGTCTCGTGGATACTTTCAAGTGTCTGGATTACAATCCAGTAGTAGTCAAATGACTGCACTACAACCAAGTAGTCAGTATGCAAGACAAGACCACATGTCCCTTCAATTAGTGTAA
Protein sequence

>Msa0236020

MVCSGGHLVWSCSFASEDSGVHIQVVVHLAGSVLVVGFVLQRDCFLVVAAFFGVVFGVDAGEKMNSKRHSGITCKVGSSQLSPILEAMDFPNESMSDSPQRKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKETIARYKKACSDSSGTGSASEANAQFYQQEADKLRVQISNLQNNNRQMMGESLGSMNAKELKNLESKLEKGISRIRSKKQEIDLHNNNQLLRAKIAESERNHSHHSNINMSMLPGGTNYESMQSQNQQQQQYESRGYFQVSGLQSSSSQMTALQPSSQYARQDHMSLQLV*