Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237160 | XP_003594006.1 | 88.316 | 291 | 2 | 2 | 6 | 264 | 103 | 393 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237160 | sp|Q10LG8|TLP6_ORYSJ | 63.918 | 291 | 70 | 4 | 6 | 264 | 116 | 403 | 1.03e-131 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237160 | G7ISK0 | 88.316 | 291 | 2 | 2 | 6 | 264 | 103 | 393 | 0.0 | 524 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0237160 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237160 | MtrunA17_Chr2g0286441 | 88.316 | 291 | 2 | 2 | 6 | 264 | 103 | 393 | 0.0 | 524 |
| Msa0237160 | MtrunA17_Chr1g0196071 | 62.759 | 290 | 76 | 3 | 6 | 264 | 114 | 402 | 2.06e-126 | 365 |
| Msa0237160 | MtrunA17_Chr2g0278511 | 52.903 | 310 | 95 | 7 | 6 | 264 | 118 | 427 | 9.63e-102 | 303 |
| Msa0237160 | MtrunA17_Chr1g0201891 | 52.381 | 315 | 94 | 7 | 6 | 264 | 117 | 431 | 2.25e-101 | 302 |
| Msa0237160 | MtrunA17_Chr1g0155301 | 53.378 | 296 | 94 | 5 | 6 | 264 | 134 | 422 | 9.64e-99 | 295 |
| Msa0237160 | MtrunA17_Chr8g0373001 | 53.020 | 298 | 99 | 5 | 6 | 264 | 117 | 412 | 2.41e-98 | 293 |
| Msa0237160 | MtrunA17_Chr5g0404321 | 52.961 | 304 | 92 | 6 | 6 | 264 | 119 | 416 | 4.43e-98 | 293 |
| Msa0237160 | MtrunA17_Chr2g0315641 | 50.534 | 281 | 102 | 6 | 6 | 264 | 106 | 371 | 2.05e-85 | 259 |
| Msa0237160 | MtrunA17_Chr2g0315651 | 44.364 | 275 | 129 | 7 | 6 | 264 | 101 | 367 | 1.14e-65 | 208 |
| Msa0237160 | MtrunA17_Chr8g0373361 | 38.699 | 292 | 131 | 9 | 6 | 257 | 122 | 405 | 2.40e-50 | 170 |
| Msa0237160 | MtrunA17_Chr8g0373341 | 37.818 | 275 | 105 | 9 | 1 | 254 | 91 | 320 | 1.30e-41 | 145 |
| Msa0237160 | MtrunA17_Chr8g0373351 | 34.589 | 292 | 86 | 8 | 6 | 256 | 59 | 286 | 1.04e-40 | 142 |
| Msa0237160 | MtrunA17_Chr8g0373331 | 31.034 | 290 | 105 | 8 | 6 | 257 | 116 | 348 | 2.37e-32 | 121 |
| Msa0237160 | MtrunA17_Chr1g0156151 | 57.732 | 97 | 36 | 1 | 6 | 97 | 115 | 211 | 1.08e-31 | 116 |
| Msa0237160 | MtrunA17_Chr2g0334041 | 26.482 | 253 | 153 | 10 | 20 | 263 | 131 | 359 | 2.06e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237160 | AT2G47900.2 | 64.041 | 292 | 71 | 3 | 6 | 264 | 116 | 406 | 1.17e-126 | 366 |
| Msa0237160 | AT2G47900.1 | 64.041 | 292 | 71 | 3 | 6 | 264 | 116 | 406 | 1.17e-126 | 366 |
| Msa0237160 | AT2G47900.3 | 63.823 | 293 | 71 | 3 | 6 | 264 | 116 | 407 | 1.53e-126 | 365 |
| Msa0237160 | AT5G18680.2 | 55.184 | 299 | 81 | 8 | 6 | 264 | 12 | 297 | 2.41e-104 | 305 |
| Msa0237160 | AT3G06380.2 | 56.944 | 288 | 88 | 6 | 7 | 264 | 7 | 288 | 2.92e-103 | 302 |
| Msa0237160 | AT5G18680.1 | 55.184 | 299 | 81 | 8 | 6 | 264 | 104 | 389 | 3.68e-103 | 305 |
| Msa0237160 | AT3G06380.1 | 56.944 | 288 | 88 | 6 | 7 | 264 | 99 | 380 | 5.78e-102 | 302 |
| Msa0237160 | AT2G18280.2 | 53.425 | 292 | 93 | 7 | 6 | 264 | 112 | 393 | 4.85e-95 | 285 |
| Msa0237160 | AT2G18280.1 | 53.425 | 292 | 93 | 7 | 6 | 264 | 112 | 393 | 4.85e-95 | 285 |
| Msa0237160 | AT1G47270.3 | 50.342 | 292 | 101 | 5 | 6 | 264 | 108 | 388 | 3.71e-92 | 277 |
| Msa0237160 | AT1G43640.2 | 47.785 | 316 | 103 | 9 | 6 | 264 | 53 | 363 | 6.94e-92 | 276 |
| Msa0237160 | AT1G47270.1 | 50.342 | 292 | 101 | 5 | 6 | 264 | 133 | 413 | 7.19e-92 | 277 |
| Msa0237160 | AT1G47270.2 | 50.342 | 292 | 101 | 5 | 6 | 264 | 132 | 412 | 7.86e-92 | 277 |
| Msa0237160 | AT1G25280.1 | 50.307 | 326 | 92 | 9 | 6 | 264 | 123 | 445 | 1.44e-91 | 278 |
| Msa0237160 | AT1G43640.1 | 47.785 | 316 | 103 | 9 | 6 | 264 | 119 | 429 | 3.79e-91 | 276 |
| Msa0237160 | AT1G76900.2 | 47.181 | 337 | 98 | 7 | 6 | 264 | 121 | 455 | 1.20e-89 | 273 |
| Msa0237160 | AT1G76900.1 | 47.181 | 337 | 98 | 7 | 6 | 264 | 121 | 455 | 1.20e-89 | 273 |
| Msa0237160 | AT1G76900.3 | 47.181 | 337 | 98 | 7 | 6 | 264 | 121 | 455 | 1.20e-89 | 273 |
| Msa0237160 | AT1G53320.1 | 49.653 | 288 | 102 | 7 | 5 | 264 | 107 | 379 | 2.73e-84 | 257 |
| Msa0237160 | AT1G25280.3 | 49.259 | 270 | 69 | 8 | 60 | 264 | 1 | 267 | 7.04e-74 | 226 |
| Msa0237160 | AT1G25280.2 | 49.259 | 270 | 69 | 8 | 60 | 264 | 1 | 267 | 7.04e-74 | 226 |
| Msa0237160 | AT1G61940.1 | 43.564 | 101 | 32 | 5 | 109 | 208 | 102 | 178 | 1.33e-13 | 68.9 |
Find 74 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACCCTATTTCGGCGTTTC+AGG | 0.176930 | 2_2:+10228477 | Msa0237160:CDS |
| AATGCCTGAAACGCCGAAAT+AGG | 0.212680 | 2_2:-10228481 | None:intergenic |
| GATAAGATTATTCTGCAATT+TGG | 0.220956 | 2_2:+10228418 | Msa0237160:CDS |
| ATGTGTGCAGCACCTTATTA+TGG | 0.248565 | 2_2:-10229627 | None:intergenic |
| TTTCAAAATCAGTAACAAAT+TGG | 0.270566 | 2_2:+10229868 | Msa0237160:three_prime_UTR |
| CTCTTATTCACAAGCAATCT+TGG | 0.300510 | 2_2:-10228530 | None:intergenic |
| TCTCAGATTGTGATCTAATC+TGG | 0.312471 | 2_2:-10229523 | None:intergenic |
| GTTCTACTGAATCCATAATA+AGG | 0.331885 | 2_2:+10229615 | Msa0237160:three_prime_UTR |
| CTTCATAAATACTTTCTCAT+TGG | 0.351432 | 2_2:-10229579 | None:intergenic |
| TGATGACGGGAAGTTCCTTT+TGG | 0.356463 | 2_2:+10227261 | Msa0237160:CDS |
| ATTCTGCAATTTGGAAAAGT+TGG | 0.358632 | 2_2:+10228427 | Msa0237160:CDS |
| CTGGTGGCTTCCGCAGAAAA+TGG | 0.369954 | 2_2:+10228376 | Msa0237160:CDS |
| GGATTTCCGATACCCTATTT+CGG | 0.388100 | 2_2:+10228468 | Msa0237160:CDS |
| TCCTTAAGATCAAATTTCCT+TGG | 0.391394 | 2_2:+10227476 | Msa0237160:intron |
| AACATAGTTGTTGCTTCCCC+TGG | 0.398674 | 2_2:-10227350 | None:intergenic |
| ATGCCTGAAACGCCGAAATA+GGG | 0.407311 | 2_2:-10228480 | None:intergenic |
| GAATAAGAGCATGTTTAAAC+AGG | 0.410840 | 2_2:+10228544 | Msa0237160:exon |
| AAAGTATTTATGAAGATGAT+TGG | 0.413949 | 2_2:+10229587 | Msa0237160:three_prime_UTR |
| TTCTGCAATTTGGAAAAGTT+GGG | 0.417811 | 2_2:+10228428 | Msa0237160:CDS |
| TCTCTATCCGGACCTCTTGT+TGG | 0.419329 | 2_2:+10228232 | Msa0237160:CDS |
| TTACTAAAAGTCGTTCTACT+AGG | 0.428715 | 2_2:+10227549 | Msa0237160:CDS |
| TTGCTCCTGCATGAGGTGGC+TGG | 0.453181 | 2_2:-10227523 | None:intergenic |
| GGCATGAGCAGCTGCAGTGT+TGG | 0.476628 | 2_2:+10228302 | Msa0237160:CDS |
| TCCGCAGAAAATGGAACAGC+TGG | 0.477339 | 2_2:+10228385 | Msa0237160:CDS |
| GGGGAAGCAACAACTATGTT+GGG | 0.477342 | 2_2:+10227353 | Msa0237160:CDS |
| TGCGCTTTATAAAGCATTGA+AGG | 0.484376 | 2_2:-10227076 | None:intergenic |
| AGAATAATCTTATCGTGTTC+CGG | 0.487652 | 2_2:-10228409 | None:intergenic |
| AGGAGATTCTCCCTTGGACC+AGG | 0.489762 | 2_2:-10227056 | None:intergenic |
| AATAATATGTTTGAGTGGAC+CGG | 0.492380 | 2_2:-10227100 | None:intergenic |
| GGAATAATTTACACGAATGA+AGG | 0.496581 | 2_2:-10229708 | None:intergenic |
| AATGCTTTATAAAGCGCAAC+CGG | 0.499079 | 2_2:+10227081 | Msa0237160:CDS |
| TACATTTGCGTGCAGCCAAA+AGG | 0.499540 | 2_2:-10227276 | None:intergenic |
| TGGGAAGGATTTGTTTACAA+TGG | 0.502527 | 2_2:+10228447 | Msa0237160:CDS |
| GACGGCCAGCCACCTCATGC+AGG | 0.508409 | 2_2:+10227518 | Msa0237160:CDS |
| AGGGGAAGCAACAACTATGT+TGG | 0.508852 | 2_2:+10227352 | Msa0237160:CDS |
| AGAAAATGGAACAGCTGGAC+CGG | 0.509425 | 2_2:+10228390 | Msa0237160:CDS |
| TTTATCGCCAACAAGAGGTC+CGG | 0.512577 | 2_2:-10228239 | None:intergenic |
| TGCAGCTGCTCATGCCACCT+CGG | 0.519909 | 2_2:-10228295 | None:intergenic |
| ACAACTATGTTGGGAAATTG+AGG | 0.521031 | 2_2:+10227362 | Msa0237160:CDS |
| TAGACGCAGATGATATGTCC+AGG | 0.522084 | 2_2:+10227332 | Msa0237160:CDS |
| GTGGTAGAGAACTCTCTATC+CGG | 0.528357 | 2_2:+10228220 | Msa0237160:CDS |
| ATGACACAGTGCATTCTCCT+TGG | 0.528561 | 2_2:-10228076 | None:intergenic |
| TACTCGCAATAACATAATAA+CGG | 0.535052 | 2_2:+10229830 | Msa0237160:three_prime_UTR |
| TTCGATTGAAGAGGATGGAA+TGG | 0.537253 | 2_2:-10228104 | None:intergenic |
| AGATAGTGAACTTTGTTCCA+AGG | 0.538026 | 2_2:-10227493 | None:intergenic |
| ATTCAGCGCTAGGTGATGAC+GGG | 0.542238 | 2_2:+10227248 | Msa0237160:intron |
| AGAGAAAACTCAGTTTGTGT+AGG | 0.543872 | 2_2:-10228142 | None:intergenic |
| AATTCAGCGCTAGGTGATGA+CGG | 0.546541 | 2_2:+10227247 | Msa0237160:intron |
| AAGGAGAATGCACTGTGTCA+TGG | 0.546764 | 2_2:+10228078 | Msa0237160:CDS |
| ATGATATAATCTGTGCATGT+AGG | 0.547626 | 2_2:-10227304 | None:intergenic |
| TGTGTAGGAGCTACGCCACC+TGG | 0.549577 | 2_2:-10228127 | None:intergenic |
| GCAATTTGGAAAAGTTGGGA+AGG | 0.553649 | 2_2:+10228432 | Msa0237160:CDS |
| CCATCCTCTTCAATCGAACC+AGG | 0.562739 | 2_2:+10228109 | Msa0237160:CDS |
| CATTGAAGGAGATTCTCCCT+TGG | 0.563702 | 2_2:-10227062 | None:intergenic |
| CCTGGTTCGATTGAAGAGGA+TGG | 0.573458 | 2_2:-10228109 | None:intergenic |
| TGGACGGGTGACAATTGCCT+CGG | 0.581243 | 2_2:+10228339 | Msa0237160:CDS |
| TATGTTTGAATGTCACTTGG+TGG | 0.595420 | 2_2:+10229548 | Msa0237160:three_prime_UTR |
| CTTGTTGGCGATAAAAGAGA+TGG | 0.602960 | 2_2:+10228247 | Msa0237160:CDS |
| CCGATCAAAATCAAATCGTG+TGG | 0.606213 | 2_2:+10228201 | Msa0237160:CDS |
| AAGAATTTATGTACAGCACA+AGG | 0.606359 | 2_2:-10229731 | None:intergenic |
| GAATTTATGTACAGCACAAG+GGG | 0.607071 | 2_2:-10229729 | None:intergenic |
| TATTTATGAAGATGATTGGA+TGG | 0.607206 | 2_2:+10229591 | Msa0237160:three_prime_UTR |
| GAAACGCCGAAATAGGGTAT+CGG | 0.608647 | 2_2:-10228474 | None:intergenic |
| GCCACCTGGTTCGATTGAAG+AGG | 0.610396 | 2_2:-10228113 | None:intergenic |
| AAACAAATAATATGTTTGAG+TGG | 0.611039 | 2_2:-10227105 | None:intergenic |
| AGACGCAGATGATATGTCCA+GGG | 0.615218 | 2_2:+10227333 | Msa0237160:CDS |
| ATGTTTGAATGTCACTTGGT+GGG | 0.623108 | 2_2:+10229549 | Msa0237160:three_prime_UTR |
| ACAAAGTTCACTATCTATGA+CGG | 0.627271 | 2_2:+10227500 | Msa0237160:CDS |
| AGAATTTATGTACAGCACAA+GGG | 0.629375 | 2_2:-10229730 | None:intergenic |
| AAATATGTTTGAATGTCACT+TGG | 0.642156 | 2_2:+10229545 | Msa0237160:three_prime_UTR |
| TCTTGGTATCAAAGCTGCTG+AGG | 0.664183 | 2_2:-10228513 | None:intergenic |
| GAATGTGAGGAACGATGGCA+AGG | 0.691206 | 2_2:+10225866 | None:intergenic |
| TCCTCTTCAATCGAACCAGG+TGG | 0.710835 | 2_2:+10228112 | Msa0237160:CDS |
| GACGCAGATGATATGTCCAG+GGG | 0.717675 | 2_2:+10227334 | Msa0237160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATATTATTAATTTTCT+GGG | + | chr2_2:10228686-10228705 | Msa0237160:intron | 10.0% |
| !!! | TATATATTATTAATTTTCTG+GGG | + | chr2_2:10228687-10228706 | Msa0237160:intron | 10.0% |
| !!! | ATAAAACAATTTGTTTTATT+TGG | + | chr2_2:10228734-10228753 | Msa0237160:intron | 10.0% |
| !!! | TATTATTTTATTGATATGAC+AGG | + | chr2_2:10226166-10226185 | Msa0237160:intron | 15.0% |
| !!! | TAATAAGGATTTTATATGAA+AGG | + | chr2_2:10226347-10226366 | Msa0237160:intron | 15.0% |
| !! | AATGTAATACTAAATTACTA+AGG | - | chr2_2:10226978-10226997 | None:intergenic | 15.0% |
| !! | TTAAGGAAGAATAAAAAAAA+AGG | - | chr2_2:10227463-10227482 | None:intergenic | 15.0% |
| !! | TGTTAAAAATTGATTAAAAC+TGG | + | chr2_2:10228586-10228605 | Msa0237160:intron | 15.0% |
| !!! | GGTATATATTATTAATTTTC+TGG | + | chr2_2:10228685-10228704 | Msa0237160:intron | 15.0% |
| !! | AACTATTAAGAAAGATTTAA+AGG | - | chr2_2:10229083-10229102 | None:intergenic | 15.0% |
| !! | TTAAATCTTTCTTAATAGTT+TGG | + | chr2_2:10229083-10229102 | Msa0237160:intron | 15.0% |
| !!! | TTAACAATATGATTTTCATT+TGG | + | chr2_2:10229777-10229796 | Msa0237160:three_prime_UTR | 15.0% |
| !!! | AATGAGATGAATTCTAAAAA+TGG | + | chr2_2:10226244-10226263 | Msa0237160:intron | 20.0% |
| !! | AAACTAACTTAAAATACAGT+TGG | - | chr2_2:10226313-10226332 | None:intergenic | 20.0% |
| !!! | TTCTCTTTGAAAAACTAATA+AGG | + | chr2_2:10226332-10226351 | Msa0237160:intron | 20.0% |
| !! | ATATAAACATATCTCAAAAC+AGG | - | chr2_2:10226552-10226571 | None:intergenic | 20.0% |
| !! | AATATGTTTACATTTACCAA+TGG | - | chr2_2:10226592-10226611 | None:intergenic | 20.0% |
| !! | AAGACTAAAATTATTCTCAA+AGG | - | chr2_2:10226763-10226782 | None:intergenic | 20.0% |
| !!! | TTTGAGAATAATTTTAGTCT+TGG | + | chr2_2:10226762-10226781 | Msa0237160:intron | 20.0% |
| !! | AAACAAATAATATGTTTGAG+TGG | - | chr2_2:10227108-10227127 | None:intergenic | 20.0% |
| !!! | GCAAAAGTATAAAACAATAA+CGG | - | chr2_2:10227416-10227435 | None:intergenic | 20.0% |
| !!! | TAATCAATTTTTAACACAGT+TGG | - | chr2_2:10228582-10228601 | None:intergenic | 20.0% |
| !!! | CATCAATGCTATTTTATATT+TGG | - | chr2_2:10228850-10228869 | None:intergenic | 20.0% |
| !! | ATAAACTATAAGGTTATGTT+TGG | - | chr2_2:10228904-10228923 | None:intergenic | 20.0% |
| !!! | AAAGTATTTATGAAGATGAT+TGG | + | chr2_2:10229587-10229606 | Msa0237160:three_prime_UTR | 20.0% |
| !! | TAAAAGAGAAGAAAAATTGA+GGG | - | chr2_2:10229760-10229779 | None:intergenic | 20.0% |
| !! | TTAAAAGAGAAGAAAAATTG+AGG | - | chr2_2:10229761-10229780 | None:intergenic | 20.0% |
| !! | TTTCAAAATCAGTAACAAAT+TGG | + | chr2_2:10229868-10229887 | Msa0237160:three_prime_UTR | 20.0% |
| ! | TTACCAAGAGTAATTTAGAT+AGG | - | chr2_2:10225937-10225956 | None:intergenic | 25.0% |
| !! | CTTGGAAAGAATTTTTGATA+AGG | + | chr2_2:10226088-10226107 | Msa0237160:intron | 25.0% |
| ! | TCAAAACAGGAATATCATAT+AGG | - | chr2_2:10226539-10226558 | None:intergenic | 25.0% |
| ! | ATGATGATTGAATATGACTA+TGG | + | chr2_2:10226902-10226921 | Msa0237160:intron | 25.0% |
| !! | TTTACCTAACATGTTTCTAT+TGG | + | chr2_2:10227017-10227036 | Msa0237160:intron | 25.0% |
| !! | TTTCTATTGGCGAATAATTT+TGG | + | chr2_2:10227030-10227049 | Msa0237160:intron | 25.0% |
| ! | GTGAGTATACAATTAATCTT+TGG | + | chr2_2:10227144-10227163 | Msa0237160:intron | 25.0% |
| ! | TCATATGAATTAAATGTGCT+AGG | + | chr2_2:10227635-10227654 | Msa0237160:intron | 25.0% |
| ! | TGTCGAACAAAATAAAAGTA+TGG | - | chr2_2:10227950-10227969 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGATCGGAAAAA+AGG | - | chr2_2:10228196-10228215 | None:intergenic | 25.0% |
| ! | GATAAGATTATTCTGCAATT+TGG | + | chr2_2:10228418-10228437 | Msa0237160:CDS | 25.0% |
| !! | ATCATTGAGCAAATACATTT+TGG | + | chr2_2:10228633-10228652 | Msa0237160:intron | 25.0% |
| !!! | ATATTATTAATTTTCTGGGG+TGG | + | chr2_2:10228690-10228709 | Msa0237160:intron | 25.0% |
| ! | AGGGTTTGATATAAACTATA+AGG | - | chr2_2:10228914-10228933 | None:intergenic | 25.0% |
| ! | CCATTATAAATACCAGAAAA+GGG | - | chr2_2:10228933-10228952 | None:intergenic | 25.0% |
| ! | TAGAACATTATGACATTGTT+TGG | - | chr2_2:10229021-10229040 | None:intergenic | 25.0% |
| ! | AATCTTTCTTAATAGTTTGG+AGG | + | chr2_2:10229086-10229105 | Msa0237160:intron | 25.0% |
| ! | TTTACAATCAAAATATGCAG+CGG | - | chr2_2:10229259-10229278 | None:intergenic | 25.0% |
| ! | AATAAAGTAACTGAGATAAC+AGG | - | chr2_2:10229425-10229444 | None:intergenic | 25.0% |
| ! | GTTTATCTAATGAGAATGTT+TGG | + | chr2_2:10229476-10229495 | Msa0237160:intron | 25.0% |
| ! | AAATATGTTTGAATGTCACT+TGG | + | chr2_2:10229545-10229564 | Msa0237160:three_prime_UTR | 25.0% |
| ! | CTTCATAAATACTTTCTCAT+TGG | - | chr2_2:10229582-10229601 | None:intergenic | 25.0% |
| ! | TATTTATGAAGATGATTGGA+TGG | + | chr2_2:10229591-10229610 | Msa0237160:three_prime_UTR | 25.0% |
| ! | TACTCGCAATAACATAATAA+CGG | + | chr2_2:10229830-10229849 | Msa0237160:three_prime_UTR | 25.0% |
| CAACCTATCTAAATTACTCT+TGG | + | chr2_2:10225931-10225950 | Msa0237160:intron | 30.0% | |
| ! | AAATTGAGAAGCATGAGTTA+TGG | - | chr2_2:10225978-10225997 | None:intergenic | 30.0% |
| TTCTCTGTCAGAGAATTATT+TGG | + | chr2_2:10226282-10226301 | Msa0237160:intron | 30.0% | |
| ! | GGATTTTATATGAAAGGCAA+TGG | + | chr2_2:10226353-10226372 | Msa0237160:intron | 30.0% |
| AGTCAACTCAGTTTAGTTAA+AGG | + | chr2_2:10226452-10226471 | Msa0237160:intron | 30.0% | |
| AGATGTCTGACATATATGAT+AGG | + | chr2_2:10226513-10226532 | Msa0237160:intron | 30.0% | |
| TGTGAATGTTGTAATTCCAT+TGG | + | chr2_2:10226573-10226592 | Msa0237160:intron | 30.0% | |
| TTATGTCTAACTACCTTGTT+TGG | + | chr2_2:10226665-10226684 | Msa0237160:intron | 30.0% | |
| ! | TATGTCTAACTACCTTGTTT+GGG | + | chr2_2:10226666-10226685 | Msa0237160:intron | 30.0% |
| GATTGAATATGACTATGTTG+TGG | + | chr2_2:10226907-10226926 | Msa0237160:intron | 30.0% | |
| AATATGACTATGTTGTGGAA+GGG | + | chr2_2:10226912-10226931 | Msa0237160:intron | 30.0% | |
| !! | TACATTGTTTTACAGCACTA+TGG | + | chr2_2:10226992-10227011 | Msa0237160:intron | 30.0% |
| AATAATATGTTTGAGTGGAC+CGG | - | chr2_2:10227103-10227122 | None:intergenic | 30.0% | |
| TTAAAGAAGCAATGACCAAA+AGG | - | chr2_2:10227229-10227248 | None:intergenic | 30.0% | |
| ATGATATAATCTGTGCATGT+AGG | - | chr2_2:10227307-10227326 | None:intergenic | 30.0% | |
| TCCTTAAGATCAAATTTCCT+TGG | + | chr2_2:10227476-10227495 | Msa0237160:intron | 30.0% | |
| TCCAAGGAAATTTGATCTTA+AGG | - | chr2_2:10227480-10227499 | None:intergenic | 30.0% | |
| ACAAAGTTCACTATCTATGA+CGG | + | chr2_2:10227500-10227519 | Msa0237160:CDS | 30.0% | |
| TTACTAAAAGTCGTTCTACT+AGG | + | chr2_2:10227549-10227568 | Msa0237160:CDS | 30.0% | |
| !! | CTTACTTTTATCACAACGAT+CGG | + | chr2_2:10227786-10227805 | Msa0237160:intron | 30.0% |
| ACTATCTATATATTGCAAGC+AGG | + | chr2_2:10228050-10228069 | Msa0237160:intron | 30.0% | |
| CTATCTATATATTGCAAGCA+GGG | + | chr2_2:10228051-10228070 | Msa0237160:intron | 30.0% | |
| TATCTATATATTGCAAGCAG+GGG | + | chr2_2:10228052-10228071 | Msa0237160:intron | 30.0% | |
| TATGCTTGTGTTGAAAAACA+AGG | + | chr2_2:10228270-10228289 | Msa0237160:CDS | 30.0% | |
| !! | TGTTGGTGCTTAAATTTTCA+TGG | + | chr2_2:10228319-10228338 | Msa0237160:CDS | 30.0% |
| AGAATAATCTTATCGTGTTC+CGG | - | chr2_2:10228412-10228431 | None:intergenic | 30.0% | |
| ATTCTGCAATTTGGAAAAGT+TGG | + | chr2_2:10228427-10228446 | Msa0237160:CDS | 30.0% | |
| TTCTGCAATTTGGAAAAGTT+GGG | + | chr2_2:10228428-10228447 | Msa0237160:CDS | 30.0% | |
| ! | GAATAAGAGCATGTTTAAAC+AGG | + | chr2_2:10228544-10228563 | Msa0237160:exon | 30.0% |
| !!! | TGAGCAAATACATTTTGGTT+TGG | + | chr2_2:10228638-10228657 | Msa0237160:intron | 30.0% |
| GCATAAGATTACAAAAAGAG+AGG | - | chr2_2:10228794-10228813 | None:intergenic | 30.0% | |
| TTTGGTAGACAGACTAAAAT+AGG | - | chr2_2:10228886-10228905 | None:intergenic | 30.0% | |
| ! | GTTTATATCAAACCCTTTTC+TGG | + | chr2_2:10228918-10228937 | Msa0237160:intron | 30.0% |
| !! | CCCTTTTCTGGTATTTATAA+TGG | + | chr2_2:10228930-10228949 | Msa0237160:intron | 30.0% |
| GCCATTATAAATACCAGAAA+AGG | - | chr2_2:10228934-10228953 | None:intergenic | 30.0% | |
| AGATTTAAAGGTCAACTGTT+TGG | - | chr2_2:10229071-10229090 | None:intergenic | 30.0% | |
| TAACTCAGAAACTTAGGATT+TGG | + | chr2_2:10229160-10229179 | Msa0237160:intron | 30.0% | |
| AGATAACAGGTACAATCTTA+TGG | - | chr2_2:10229412-10229431 | None:intergenic | 30.0% | |
| !! | TTTGGTTCAATTTTAATGCC+AGG | + | chr2_2:10229494-10229513 | Msa0237160:intron | 30.0% |
| GTTCTACTGAATCCATAATA+AGG | + | chr2_2:10229615-10229634 | Msa0237160:three_prime_UTR | 30.0% | |
| GGAATAATTTACACGAATGA+AGG | - | chr2_2:10229711-10229730 | None:intergenic | 30.0% | |
| AGAATTTATGTACAGCACAA+GGG | - | chr2_2:10229733-10229752 | None:intergenic | 30.0% | |
| AAGAATTTATGTACAGCACA+AGG | - | chr2_2:10229734-10229753 | None:intergenic | 30.0% | |
| TGATCATGTGCTAAAGAACT+TGG | + | chr2_2:10226070-10226089 | Msa0237160:intron | 35.0% | |
| CAACTCAGTTTAGTTAAAGG+AGG | + | chr2_2:10226455-10226474 | Msa0237160:intron | 35.0% | |
| AAGGTAGTTAGACATAAGTG+AGG | - | chr2_2:10226662-10226681 | None:intergenic | 35.0% | |
| GAATATGACTATGTTGTGGA+AGG | + | chr2_2:10226911-10226930 | Msa0237160:intron | 35.0% | |
| TTCGCCAATAGAAACATGTT+AGG | - | chr2_2:10227024-10227043 | None:intergenic | 35.0% | |
| !! | TGCGCTTTATAAAGCATTGA+AGG | - | chr2_2:10227079-10227098 | None:intergenic | 35.0% |
| AATGCTTTATAAAGCGCAAC+CGG | + | chr2_2:10227081-10227100 | Msa0237160:CDS | 35.0% | |
| GGAAGGTTTAGATCTCAAAA+AGG | - | chr2_2:10227208-10227227 | None:intergenic | 35.0% | |
| ! | TGAGATCTAAACCTTCCTTT+TGG | + | chr2_2:10227211-10227230 | Msa0237160:intron | 35.0% |
| ACAACTATGTTGGGAAATTG+AGG | + | chr2_2:10227362-10227381 | Msa0237160:CDS | 35.0% | |
| !!! | ACTTTTGCTGTTTATCAGTG+TGG | + | chr2_2:10227428-10227447 | Msa0237160:intron | 35.0% |
| AGATAGTGAACTTTGTTCCA+AGG | - | chr2_2:10227496-10227515 | None:intergenic | 35.0% | |
| TAAAAGTCGTTCTACTAGGT+TGG | + | chr2_2:10227553-10227572 | Msa0237160:intron | 35.0% | |
| AATTAAATGTGCTAGGCTCT+AGG | + | chr2_2:10227642-10227661 | Msa0237160:intron | 35.0% | |
| CGATCGTTGTGATAAAAGTA+AGG | - | chr2_2:10227788-10227807 | None:intergenic | 35.0% | |
| CGGTAAGCTAAATAGTTTAC+GGG | - | chr2_2:10227998-10228017 | None:intergenic | 35.0% | |
| GCGGTAAGCTAAATAGTTTA+CGG | - | chr2_2:10227999-10228018 | None:intergenic | 35.0% | |
| ATCTATATATTGCAAGCAGG+GGG | + | chr2_2:10228053-10228072 | Msa0237160:intron | 35.0% | |
| AGAGAAAACTCAGTTTGTGT+AGG | - | chr2_2:10228145-10228164 | None:intergenic | 35.0% | |
| GATCGGAAAAAAGGAAACAA+GGG | - | chr2_2:10228187-10228206 | None:intergenic | 35.0% | |
| TGATCGGAAAAAAGGAAACA+AGG | - | chr2_2:10228188-10228207 | None:intergenic | 35.0% | |
| !! | CCACACGATTTGATTTTGAT+CGG | - | chr2_2:10228204-10228223 | None:intergenic | 35.0% |
| ! | GGTGCTTAAATTTTCATGGA+CGG | + | chr2_2:10228323-10228342 | Msa0237160:CDS | 35.0% |
| ! | GTGCTTAAATTTTCATGGAC+GGG | + | chr2_2:10228324-10228343 | Msa0237160:CDS | 35.0% |
| ! | TGGGAAGGATTTGTTTACAA+TGG | + | chr2_2:10228447-10228466 | Msa0237160:CDS | 35.0% |
| CTCTTATTCACAAGCAATCT+TGG | - | chr2_2:10228533-10228552 | None:intergenic | 35.0% | |
| !! | TGGTAGCTTTAAGTAGTGTT+TGG | + | chr2_2:10228710-10228729 | Msa0237160:intron | 35.0% |
| GGATAAGGCTTAATTGTTGT+TGG | - | chr2_2:10228973-10228992 | None:intergenic | 35.0% | |
| ! | ACAATTAAGCCTTATCCCAT+TGG | + | chr2_2:10228976-10228995 | Msa0237160:intron | 35.0% |
| ! | CAATTAAGCCTTATCCCATT+GGG | + | chr2_2:10228977-10228996 | Msa0237160:intron | 35.0% |
| TCAAAATATGCAGCGGTATT+GGG | - | chr2_2:10229252-10229271 | None:intergenic | 35.0% | |
| ATCAAAATATGCAGCGGTAT+TGG | - | chr2_2:10229253-10229272 | None:intergenic | 35.0% | |
| GAAATTCCGATCGTGAAATT+TGG | + | chr2_2:10229285-10229304 | Msa0237160:intron | 35.0% | |
| GACAATCCAAATTTCACGAT+CGG | - | chr2_2:10229294-10229313 | None:intergenic | 35.0% | |
| AACAGGTACAATCTTATGGA+TGG | - | chr2_2:10229408-10229427 | None:intergenic | 35.0% | |
| TCTCAGATTGTGATCTAATC+TGG | - | chr2_2:10229526-10229545 | None:intergenic | 35.0% | |
| ! | TATGTTTGAATGTCACTTGG+TGG | + | chr2_2:10229548-10229567 | Msa0237160:three_prime_UTR | 35.0% |
| ! | ATGTTTGAATGTCACTTGGT+GGG | + | chr2_2:10229549-10229568 | Msa0237160:three_prime_UTR | 35.0% |
| !! | ATGAGTTTTCAGCTAGTTTC+TGG | + | chr2_2:10229648-10229667 | Msa0237160:three_prime_UTR | 35.0% |
| GAATTTATGTACAGCACAAG+GGG | - | chr2_2:10229732-10229751 | None:intergenic | 35.0% | |
| CATAACATCGTACCCAAACA+AGG | - | chr2_2:10226681-10226700 | None:intergenic | 40.0% | |
| AGAAGCAATGACCAAAAGGA+AGG | - | chr2_2:10227225-10227244 | None:intergenic | 40.0% | |
| TGCTTCTTTAATTCAGCGCT+AGG | + | chr2_2:10227238-10227257 | Msa0237160:intron | 40.0% | |
| ! | GTAAATTTTGCTCCTGCATG+AGG | - | chr2_2:10227533-10227552 | None:intergenic | 40.0% |
| !! | TAGGTTGGTGAATCTAAAGC+AGG | + | chr2_2:10227568-10227587 | Msa0237160:intron | 40.0% |
| GGTAAAGTCACACAGATGAT+GGG | + | chr2_2:10227807-10227826 | Msa0237160:intron | 40.0% | |
| ATAGTTTACGGGTAACGCTT+TGG | - | chr2_2:10227987-10228006 | None:intergenic | 40.0% | |
| ! | GTCAATATATGAAGAGTGCG+CGG | - | chr2_2:10228018-10228037 | None:intergenic | 40.0% |
| TTCGATTGAAGAGGATGGAA+TGG | - | chr2_2:10228107-10228126 | None:intergenic | 40.0% | |
| CCGATCAAAATCAAATCGTG+TGG | + | chr2_2:10228201-10228220 | Msa0237160:CDS | 40.0% | |
| ! | TCTCTTTTATCGCCAACAAG+AGG | - | chr2_2:10228247-10228266 | None:intergenic | 40.0% |
| CTTGTTGGCGATAAAAGAGA+TGG | + | chr2_2:10228247-10228266 | Msa0237160:CDS | 40.0% | |
| ! | CAGCTGAAAGTTTTTAACCG+AGG | - | chr2_2:10228359-10228378 | None:intergenic | 40.0% |
| CTCGGTTAAAAACTTTCAGC+TGG | + | chr2_2:10228357-10228376 | Msa0237160:CDS | 40.0% | |
| GGTTAAAAACTTTCAGCTGG+TGG | + | chr2_2:10228360-10228379 | Msa0237160:CDS | 40.0% | |
| GCAATTTGGAAAAGTTGGGA+AGG | + | chr2_2:10228432-10228451 | Msa0237160:CDS | 40.0% | |
| GGATTTCCGATACCCTATTT+CGG | + | chr2_2:10228468-10228487 | Msa0237160:CDS | 40.0% | |
| ! | GGCTTTTGCAGAAAATTCGT+TGG | + | chr2_2:10228607-10228626 | Msa0237160:intron | 40.0% |
| ! | TGGCAAATTGTGTCACTATG+TGG | + | chr2_2:10228658-10228677 | Msa0237160:intron | 40.0% |
| ! | ATTGTGTCACTATGTGGCAA+TGG | + | chr2_2:10228664-10228683 | Msa0237160:intron | 40.0% |
| GGAGGATAACTCAGAAACTT+AGG | + | chr2_2:10229154-10229173 | Msa0237160:intron | 40.0% | |
| ACCATCTGATCTCGATCTAA+TGG | - | chr2_2:10229229-10229248 | None:intergenic | 40.0% | |
| GATCTAATCTGGATTGAACC+TGG | - | chr2_2:10229515-10229534 | None:intergenic | 40.0% | |
| ATGTGTGCAGCACCTTATTA+TGG | - | chr2_2:10229630-10229649 | None:intergenic | 40.0% | |
| CATTGAAGGAGATTCTCCCT+TGG | - | chr2_2:10227065-10227084 | None:intergenic | 45.0% | |
| AATTCAGCGCTAGGTGATGA+CGG | + | chr2_2:10227247-10227266 | Msa0237160:intron | 45.0% | |
| !!! | TGATGACGGGAAGTTCCTTT+TGG | + | chr2_2:10227261-10227280 | Msa0237160:CDS | 45.0% |
| TACATTTGCGTGCAGCCAAA+AGG | - | chr2_2:10227279-10227298 | None:intergenic | 45.0% | |
| TAGACGCAGATGATATGTCC+AGG | + | chr2_2:10227332-10227351 | Msa0237160:CDS | 45.0% | |
| AGACGCAGATGATATGTCCA+GGG | + | chr2_2:10227333-10227352 | Msa0237160:CDS | 45.0% | |
| ! | AACATAGTTGTTGCTTCCCC+TGG | - | chr2_2:10227353-10227372 | None:intergenic | 45.0% |
| AGGGGAAGCAACAACTATGT+TGG | + | chr2_2:10227352-10227371 | Msa0237160:CDS | 45.0% | |
| GGGGAAGCAACAACTATGTT+GGG | + | chr2_2:10227353-10227372 | Msa0237160:CDS | 45.0% | |
| ! | AATTTTGCTCCTGCATGAGG+TGG | - | chr2_2:10227530-10227549 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGGTTTCACCCA+AGG | + | chr2_2:10227580-10227599 | Msa0237160:intron | 45.0% |
| TCATATGAGATGTGAGCCAC+TGG | - | chr2_2:10227623-10227642 | None:intergenic | 45.0% | |
| CGGTAAAGTCACACAGATGA+TGG | + | chr2_2:10227806-10227825 | Msa0237160:intron | 45.0% | |
| ATGACACAGTGCATTCTCCT+TGG | - | chr2_2:10228079-10228098 | None:intergenic | 45.0% | |
| AAGGAGAATGCACTGTGTCA+TGG | + | chr2_2:10228078-10228097 | Msa0237160:CDS | 45.0% | |
| GTGGTAGAGAACTCTCTATC+CGG | + | chr2_2:10228220-10228239 | Msa0237160:CDS | 45.0% | |
| TTTATCGCCAACAAGAGGTC+CGG | - | chr2_2:10228242-10228261 | None:intergenic | 45.0% | |
| TGTTGAAAAACAAGGCTCCG+AGG | + | chr2_2:10228278-10228297 | Msa0237160:CDS | 45.0% | |
| ! | TCCAGCTGTTCCATTTTCTG+CGG | - | chr2_2:10228389-10228408 | None:intergenic | 45.0% |
| AGAAAATGGAACAGCTGGAC+CGG | + | chr2_2:10228390-10228409 | Msa0237160:CDS | 45.0% | |
| GAAACGCCGAAATAGGGTAT+CGG | - | chr2_2:10228477-10228496 | None:intergenic | 45.0% | |
| ATACCCTATTTCGGCGTTTC+AGG | + | chr2_2:10228477-10228496 | Msa0237160:CDS | 45.0% | |
| ATGCCTGAAACGCCGAAATA+GGG | - | chr2_2:10228483-10228502 | None:intergenic | 45.0% | |
| AATGCCTGAAACGCCGAAAT+AGG | - | chr2_2:10228484-10228503 | None:intergenic | 45.0% | |
| TCTTGGTATCAAAGCTGCTG+AGG | - | chr2_2:10228516-10228535 | None:intergenic | 45.0% | |
| ! | TAAGCCTTATCCCATTGGGT+AGG | + | chr2_2:10228981-10229000 | Msa0237160:intron | 45.0% |
| ! | AAGCCTTATCCCATTGGGTA+GGG | + | chr2_2:10228982-10229001 | Msa0237160:intron | 45.0% |
| ACGGGCAGCAAACGAATAAT+AGG | - | chr2_2:10229120-10229139 | None:intergenic | 45.0% | |
| GCCATTAGATCGAGATCAGA+TGG | + | chr2_2:10229225-10229244 | Msa0237160:intron | 45.0% | |
| CATTCACGCAATCAGCATGT+CGG | - | chr2_2:10229337-10229356 | None:intergenic | 45.0% | |
| ! | ATGCTGATTGCGTGAATGTG+TGG | + | chr2_2:10229339-10229358 | Msa0237160:intron | 45.0% |
| !! | GGCGAATAATTTTGGCAGCC+TGG | + | chr2_2:10227038-10227057 | Msa0237160:intron | 50.0% |
| !! | AATTTTGGCAGCCTGGTCCA+AGG | + | chr2_2:10227045-10227064 | Msa0237160:intron | 50.0% |
| !! | ATTTTGGCAGCCTGGTCCAA+GGG | + | chr2_2:10227046-10227065 | Msa0237160:intron | 50.0% |
| ATTCAGCGCTAGGTGATGAC+GGG | + | chr2_2:10227248-10227267 | Msa0237160:intron | 50.0% | |
| GACGCAGATGATATGTCCAG+GGG | + | chr2_2:10227334-10227353 | Msa0237160:CDS | 50.0% | |
| TAGTTGCCTGTTGGGACCTT+GGG | - | chr2_2:10227599-10227618 | None:intergenic | 50.0% | |
| ATAGTTGCCTGTTGGGACCT+TGG | - | chr2_2:10227600-10227619 | None:intergenic | 50.0% | |
| CCACTGGATAGTTGCCTGTT+GGG | - | chr2_2:10227607-10227626 | None:intergenic | 50.0% | |
| ! | CCTGGTTCGATTGAAGAGGA+TGG | - | chr2_2:10228112-10228131 | None:intergenic | 50.0% |
| CCATCCTCTTCAATCGAACC+AGG | + | chr2_2:10228109-10228128 | Msa0237160:CDS | 50.0% | |
| TCCTCTTCAATCGAACCAGG+TGG | + | chr2_2:10228112-10228131 | Msa0237160:CDS | 50.0% | |
| TCTCTATCCGGACCTCTTGT+TGG | + | chr2_2:10228232-10228251 | Msa0237160:CDS | 50.0% | |
| TGAAAAACAAGGCTCCGAGG+TGG | + | chr2_2:10228281-10228300 | Msa0237160:CDS | 50.0% | |
| TCCGCAGAAAATGGAACAGC+TGG | + | chr2_2:10228385-10228404 | Msa0237160:CDS | 50.0% | |
| AGACCCTACCCAATGGGATA+AGG | - | chr2_2:10228988-10229007 | None:intergenic | 50.0% | |
| TGTAGCAGACCCTACCCAAT+GGG | - | chr2_2:10228994-10229013 | None:intergenic | 50.0% | |
| ATGTAGCAGACCCTACCCAA+TGG | - | chr2_2:10228995-10229014 | None:intergenic | 50.0% | |
| ! | TTATTCGTTTGCTGCCCGTG+AGG | + | chr2_2:10229121-10229140 | Msa0237160:intron | 50.0% |
| TGCCCGTGAGGATAAACAGT+GGG | + | chr2_2:10229133-10229152 | Msa0237160:intron | 50.0% | |
| CTCCCACTGTTTATCCTCAC+GGG | - | chr2_2:10229138-10229157 | None:intergenic | 50.0% | |
| CCTCCCACTGTTTATCCTCA+CGG | - | chr2_2:10229139-10229158 | None:intergenic | 50.0% | |
| ATTCCATGCAGTCAGCACGT+TGG | + | chr2_2:10229200-10229219 | Msa0237160:intron | 50.0% | |
| AGGAGATTCTCCCTTGGACC+AGG | - | chr2_2:10227059-10227078 | None:intergenic | 55.0% | |
| GTTTCACCCAAGGTCCCAAC+AGG | + | chr2_2:10227590-10227609 | Msa0237160:intron | 55.0% | |
| CCCAACAGGCAACTATCCAG+TGG | + | chr2_2:10227604-10227623 | Msa0237160:intron | 55.0% | |
| GCCACTGGATAGTTGCCTGT+TGG | - | chr2_2:10227608-10227627 | None:intergenic | 55.0% | |
| ATATTGCAAGCAGGGGGCCA+AGG | + | chr2_2:10228059-10228078 | Msa0237160:intron | 55.0% | |
| ! | GCCACCTGGTTCGATTGAAG+AGG | - | chr2_2:10228116-10228135 | None:intergenic | 55.0% |
| TGGACGGGTGACAATTGCCT+CGG | + | chr2_2:10228339-10228358 | Msa0237160:CDS | 55.0% | |
| CTGGTGGCTTCCGCAGAAAA+TGG | + | chr2_2:10228376-10228395 | Msa0237160:CDS | 55.0% | |
| CTGCCCGTGAGGATAAACAG+TGG | + | chr2_2:10229132-10229151 | Msa0237160:intron | 55.0% | |
| CCGTGAGGATAAACAGTGGG+AGG | + | chr2_2:10229136-10229155 | Msa0237160:intron | 55.0% | |
| ATCAGCATGTCGGTGGTCGT+TGG | - | chr2_2:10229327-10229346 | None:intergenic | 55.0% | |
| TCACGCAATCAGCATGTCGG+TGG | - | chr2_2:10229334-10229353 | None:intergenic | 55.0% | |
| TTGCTCCTGCATGAGGTGGC+TGG | - | chr2_2:10227526-10227545 | None:intergenic | 60.0% | |
| TGTGTAGGAGCTACGCCACC+TGG | - | chr2_2:10228130-10228149 | None:intergenic | 60.0% | |
| TGCAGCTGCTCATGCCACCT+CGG | - | chr2_2:10228298-10228317 | None:intergenic | 60.0% | |
| GGCATGAGCAGCTGCAGTGT+TGG | + | chr2_2:10228302-10228321 | Msa0237160:CDS | 60.0% | |
| !! | CCACCAACGTGCTGACTGCA+TGG | - | chr2_2:10229206-10229225 | None:intergenic | 60.0% |
| CCATGCAGTCAGCACGTTGG+TGG | + | chr2_2:10229203-10229222 | Msa0237160:intron | 60.0% | |
| GACGGCCAGCCACCTCATGC+AGG | + | chr2_2:10227518-10227537 | Msa0237160:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 10225880 | 10229892 | 10225880 | ID=Msa0237160;Name=Msa0237160 |
| chr2_2 | mRNA | 10225880 | 10229892 | 10225880 | ID=Msa0237160-mRNA-1;Parent=Msa0237160;Name=Msa0237160-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.33|0.42|0.85|0.33|0.42|7|393|264 |
| chr2_2 | exon | 10225880 | 10225887 | 10225880 | ID=Msa0237160-mRNA-1:exon:4391;Parent=Msa0237160-mRNA-1 |
| chr2_2 | exon | 10226981 | 10226987 | 10226981 | ID=Msa0237160-mRNA-1:exon:4392;Parent=Msa0237160-mRNA-1 |
| chr2_2 | exon | 10227056 | 10227140 | 10227056 | ID=Msa0237160-mRNA-1:exon:4393;Parent=Msa0237160-mRNA-1 |
| chr2_2 | exon | 10227254 | 10227383 | 10227254 | ID=Msa0237160-mRNA-1:exon:4394;Parent=Msa0237160-mRNA-1 |
| chr2_2 | exon | 10227484 | 10227570 | 10227484 | ID=Msa0237160-mRNA-1:exon:4395;Parent=Msa0237160-mRNA-1 |
| chr2_2 | exon | 10228072 | 10228565 | 10228072 | ID=Msa0237160-mRNA-1:exon:4396;Parent=Msa0237160-mRNA-1 |
| chr2_2 | exon | 10229516 | 10229892 | 10229516 | ID=Msa0237160-mRNA-1:exon:4397;Parent=Msa0237160-mRNA-1 |
| chr2_2 | CDS | 10225880 | 10225887 | 10225880 | ID=Msa0237160-mRNA-1:cds;Parent=Msa0237160-mRNA-1 |
| chr2_2 | CDS | 10226981 | 10226987 | 10226981 | ID=Msa0237160-mRNA-1:cds;Parent=Msa0237160-mRNA-1 |
| chr2_2 | CDS | 10227056 | 10227140 | 10227056 | ID=Msa0237160-mRNA-1:cds;Parent=Msa0237160-mRNA-1 |
| chr2_2 | CDS | 10227254 | 10227383 | 10227254 | ID=Msa0237160-mRNA-1:cds;Parent=Msa0237160-mRNA-1 |
| chr2_2 | CDS | 10227484 | 10227570 | 10227484 | ID=Msa0237160-mRNA-1:cds;Parent=Msa0237160-mRNA-1 |
| chr2_2 | CDS | 10228072 | 10228549 | 10228072 | ID=Msa0237160-mRNA-1:cds;Parent=Msa0237160-mRNA-1 |
| chr2_2 | three_prime_UTR | 10228550 | 10228565 | 10228550 | ID=Msa0237160-mRNA-1:three_prime_utr;Parent=Msa0237160-mRNA-1 |
| chr2_2 | three_prime_UTR | 10229516 | 10229892 | 10229516 | ID=Msa0237160-mRNA-1:three_prime_utr;Parent=Msa0237160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
