AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0239020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239020 MtrunA17_Chr2g0289181 89.700 233 24 0 295 527 1 233 2.99e-156 444
Msa0239020 MtrunA17_Chr7g0266611 53.939 165 75 1 363 527 2 165 1.58e-42 149
Msa0239020 MtrunA17_Chr1g0202461 52.941 102 46 2 285 386 239 338 3.02e-30 122
Msa0239020 MtrunA17_Chr6g0470161 44.800 125 64 1 403 527 1 120 1.19e-28 110
Msa0239020 MtrunA17_Chr7g0248691 45.794 107 57 1 276 382 122 227 1.08e-25 107
Msa0239020 MtrunA17_Chr8g0348311 45.690 116 57 4 274 386 122 234 1.59e-25 107
Msa0239020 MtrunA17_Chr1g0184691 66.102 59 20 0 309 367 294 352 2.03e-22 99.0
Msa0239020 MtrunA17_Chr3g0139021 42.857 91 51 1 284 373 289 379 4.85e-21 95.5
Msa0239020 MtrunA17_Chr8g0387501 53.425 73 33 1 309 381 130 201 6.10e-21 92.8
Msa0239020 MtrunA17_Chr4g0071521 57.143 63 27 0 305 367 242 304 9.93e-21 93.2
Msa0239020 MtrunA17_Chr8g0379461 60.000 60 24 0 309 368 77 136 1.02e-20 91.7
Msa0239020 MtrunA17_Chr4g0053281 62.069 58 22 0 309 366 267 324 1.74e-20 92.8
Msa0239020 MtrunA17_Chr2g0293481 52.778 72 33 1 309 380 268 338 2.32e-20 94.0
Msa0239020 MtrunA17_Chr5g0401821 60.345 58 23 0 309 366 200 257 5.16e-20 90.1
Msa0239020 MtrunA17_Chr2g0319961 60.000 60 24 0 309 368 81 140 5.58e-20 89.7
Msa0239020 MtrunA17_Chr2g0284321 60.000 60 24 0 309 368 36 95 9.66e-20 87.8
Msa0239020 MtrunA17_Chr7g0228941 53.125 64 30 0 302 365 46 109 1.30e-19 84.7
Msa0239020 MtrunA17_Chr1g0147881 63.158 57 21 0 309 365 263 319 2.29e-19 89.4
Msa0239020 MtrunA17_Chr7g0270051 50.725 69 34 0 301 369 46 114 1.71e-18 85.5
Msa0239020 MtrunA17_Chr1g0194481 43.333 90 49 2 288 377 139 226 2.48e-18 86.3
Msa0239020 MtrunA17_Chr2g0302391 36.752 117 66 3 253 368 162 271 5.10e-18 86.7
Msa0239020 MtrunA17_Chr3g0099641 50.000 60 30 0 309 368 252 311 1.54e-17 85.5
Msa0239020 MtrunA17_Chr4g0051881 48.684 76 37 2 294 369 165 238 5.82e-17 82.4
Msa0239020 MtrunA17_Chr7g0263531 49.425 87 42 2 293 379 174 258 7.43e-17 83.2
Msa0239020 MtrunA17_Chr7g0263531 37.168 113 54 3 285 383 324 433 2.15e-15 78.6
Msa0239020 MtrunA17_Chr3g0136961 50.847 59 29 0 308 366 138 196 9.23e-17 80.9
Msa0239020 MtrunA17_Chr7g0218081 53.731 67 30 1 303 369 405 470 1.74e-16 82.4
Msa0239020 MtrunA17_Chr7g0218081 50.704 71 33 2 304 374 224 292 1.15e-15 79.7
Msa0239020 MtrunA17_Chr7g0270831 48.485 66 34 0 303 368 211 276 2.33e-16 81.3
Msa0239020 MtrunA17_Chr3g0101131 47.945 73 37 1 301 373 408 479 2.46e-16 82.0
Msa0239020 MtrunA17_Chr3g0101131 43.243 74 40 2 304 377 239 310 2.25e-11 66.2
Msa0239020 MtrunA17_Chr5g0445311 50.000 68 33 1 301 368 357 423 2.83e-16 81.6
Msa0239020 MtrunA17_Chr5g0445311 48.387 62 30 2 307 368 199 258 4.52e-11 65.5
Msa0239020 MtrunA17_Chr5g0418191 50.704 71 34 1 303 373 315 384 5.13e-16 80.5
Msa0239020 MtrunA17_Chr5g0418191 52.174 69 31 2 304 372 147 213 1.78e-14 75.5
Msa0239020 MtrunA17_Chr1g0150271 47.541 61 32 0 308 368 101 161 5.51e-16 77.8
Msa0239020 MtrunA17_Chr6g0470151 39.024 123 56 2 226 331 233 353 8.16e-16 79.3
Msa0239020 MtrunA17_Chr2g0322391 46.970 66 35 0 303 368 344 409 1.27e-15 79.7
Msa0239020 MtrunA17_Chr4g0042831 49.275 69 34 1 305 373 275 342 1.33e-15 78.6
Msa0239020 MtrunA17_Chr4g0042831 38.235 102 51 3 300 392 137 235 6.97e-12 67.4
Msa0239020 MtrunA17_Chr2g0288871 45.455 66 36 0 303 368 300 365 1.66e-15 79.3
Msa0239020 MtrunA17_Chr3g0079691 45.977 87 39 3 307 387 279 363 2.12e-15 79.3
Msa0239020 MtrunA17_Chr3g0079691 49.254 67 33 1 303 369 490 555 2.16e-14 76.3
Msa0239020 MtrunA17_Chr3g0106491 56.061 66 27 2 307 372 197 260 2.28e-15 79.0
Msa0239020 MtrunA17_Chr3g0106491 47.692 65 33 1 305 369 362 425 5.45e-14 74.3
Msa0239020 MtrunA17_Chr4g0075201 45.455 66 36 0 303 368 262 327 2.53e-15 78.6
Msa0239020 MtrunA17_Chr4g0001361 47.541 61 32 0 308 368 162 222 2.69e-15 77.0
Msa0239020 MtrunA17_Chr2g0294231 44.737 76 40 2 294 369 190 263 4.13e-15 77.0
Msa0239020 MtrunA17_Chr5g0432161 50.769 65 31 1 305 369 418 481 4.71e-15 78.2
Msa0239020 MtrunA17_Chr5g0432161 56.452 62 25 2 307 368 243 302 2.75e-14 75.5
Msa0239020 MtrunA17_Chr7g0238921 44.318 88 41 4 295 381 113 193 4.85e-15 76.3
Msa0239020 MtrunA17_Chr4g0060271 50.000 60 30 0 309 368 256 315 5.46e-15 77.8
Msa0239020 MtrunA17_Chr4g0025061 42.857 77 44 0 303 379 355 431 8.36e-15 77.4
Msa0239020 MtrunA17_Chr4g0074001 47.761 67 34 1 306 372 357 422 8.43e-15 77.0
Msa0239020 MtrunA17_Chr4g0025051 45.070 71 39 0 309 379 336 406 8.57e-15 77.0
Msa0239020 MtrunA17_Chr7g0270191 38.889 90 53 2 287 376 125 212 1.04e-14 75.1
Msa0239020 MtrunA17_Chr7g0216891 50.877 57 28 0 309 365 220 276 1.04e-14 77.0
Msa0239020 MtrunA17_Chr5g0418781 38.776 98 58 2 279 376 96 191 1.14e-14 74.7
Msa0239020 MtrunA17_Chr7g0249311 46.341 82 42 2 298 379 169 248 1.20e-14 77.0
Msa0239020 MtrunA17_Chr7g0249311 44.000 75 41 1 305 379 389 462 4.46e-14 75.1
Msa0239020 MtrunA17_Chr5g0447701 51.471 68 31 2 304 371 88 153 1.40e-14 75.5
Msa0239020 MtrunA17_Chr5g0447701 49.254 67 33 1 303 369 247 312 1.97e-14 75.1
Msa0239020 MtrunA17_Chr1g0188941 46.269 67 35 1 303 369 46 111 1.46e-14 70.1
Msa0239020 MtrunA17_Chr4g0051181 50.000 60 30 0 309 368 244 303 1.49e-14 76.3
Msa0239020 MtrunA17_Chr7g0243891 49.315 73 35 2 300 372 208 278 1.99e-14 75.9
Msa0239020 MtrunA17_Chr7g0243891 48.485 66 33 1 303 368 369 433 2.67e-12 69.3
Msa0239020 MtrunA17_Chr1g0150281 46.552 58 31 0 309 366 141 198 6.81e-14 72.4
Msa0239020 MtrunA17_Chr5g0443131 46.774 62 32 1 308 369 157 217 6.83e-14 72.8
Msa0239020 MtrunA17_Chr3g0129321 43.750 64 35 1 305 368 115 177 8.80e-14 70.5
Msa0239020 MtrunA17_Chr7g0249301 42.268 97 49 3 308 404 62 151 9.16e-14 73.2
Msa0239020 MtrunA17_Chr7g0249301 49.180 61 30 1 309 369 293 352 2.56e-13 71.6
Msa0239020 MtrunA17_Chr4g0004911 48.485 66 33 1 303 368 331 395 1.02e-13 73.6
Msa0239020 MtrunA17_Chr4g0004911 42.857 77 43 1 292 368 168 243 8.74e-13 70.5
Msa0239020 MtrunA17_Chr2g0333851 45.161 62 34 0 308 369 169 230 1.02e-13 72.4
Msa0239020 MtrunA17_Chr1g0150801 45.902 61 32 1 305 365 99 158 4.31e-13 67.4
Msa0239020 MtrunA17_Chr8g0383251 43.939 66 36 1 303 368 103 167 4.61e-13 67.8
Msa0239020 MtrunA17_Chr4g0068541 39.130 69 41 1 309 377 209 276 5.02e-13 70.9
Msa0239020 MtrunA17_Chr8g0335811 50.000 58 28 1 309 366 155 211 6.32e-13 68.6
Msa0239020 MtrunA17_Chr8g0383351 46.552 58 30 1 309 366 161 217 1.04e-12 67.8
Msa0239020 MtrunA17_Chr3g0129361 40.845 71 39 2 298 366 132 201 1.10e-12 67.4
Msa0239020 MtrunA17_Chr1g0189391 31.667 120 59 4 284 381 59 177 1.78e-12 68.6
Msa0239020 MtrunA17_Chr7g0224801 42.623 61 34 1 305 365 90 149 3.84e-12 64.7
Msa0239020 MtrunA17_Chr6g0485431 43.662 71 37 3 303 372 150 218 1.30e-11 66.2
Msa0239020 MtrunA17_Chr5g0432071 50.000 62 27 3 309 369 105 163 4.37e-11 62.8
Msa0239020 MtrunA17_Chr8g0387981 36.471 85 48 2 285 363 105 189 5.35e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239020 AT5G52830.1 52.525 99 45 2 285 383 143 239 4.16e-27 112
Msa0239020 AT4G01250.1 46.392 97 51 1 286 382 106 201 3.00e-25 106
Msa0239020 AT5G28650.1 64.407 59 21 0 309 367 263 321 5.81e-22 97.4
Msa0239020 AT3G04670.1 64.407 59 21 0 309 367 263 321 8.98e-22 97.1
Msa0239020 AT4G23550.1 46.154 91 48 1 292 382 124 213 2.40e-21 95.1
Msa0239020 AT2G24570.1 59.091 66 27 0 309 374 244 309 2.61e-21 95.5
Msa0239020 AT4G31550.2 44.681 94 49 1 284 374 218 311 3.14e-21 95.1
Msa0239020 AT4G31550.1 57.576 66 28 0 309 374 247 312 4.39e-21 94.7
Msa0239020 AT5G45050.1 43.878 98 53 2 281 377 1152 1248 7.14e-21 97.4
Msa0239020 AT5G45050.4 43.878 98 53 2 281 377 1013 1109 7.42e-21 97.4
Msa0239020 AT5G45050.2 43.878 98 53 2 281 377 1124 1220 8.68e-21 97.1
Msa0239020 AT2G23320.1 62.069 58 22 0 309 366 241 298 1.94e-20 92.8
Msa0239020 AT4G24240.1 43.269 104 55 2 267 366 236 339 2.06e-20 93.2
Msa0239020 AT2G30590.1 48.235 85 41 1 286 367 288 372 5.00e-20 92.4
Msa0239020 AT2G34830.1 55.072 69 30 1 309 377 216 283 6.31e-20 92.8
Msa0239020 AT2G34830.2 55.072 69 30 1 309 377 225 292 6.38e-20 92.8
Msa0239020 AT1G29280.1 45.055 91 41 1 287 368 44 134 1.34e-19 89.0
Msa0239020 AT1G30650.1 53.623 69 31 1 309 377 218 285 4.62e-19 90.1
Msa0239020 AT3G58710.2 37.391 115 58 2 309 409 71 185 5.22e-19 87.4
Msa0239020 AT3G58710.1 37.391 115 58 2 309 409 72 186 5.31e-19 87.4
Msa0239020 AT3G01080.2 54.545 66 29 1 303 368 339 403 5.27e-17 84.0
Msa0239020 AT3G01080.2 40.206 97 47 4 304 395 201 291 1.24e-14 76.6
Msa0239020 AT3G01080.1 54.545 66 29 1 303 368 301 365 7.31e-17 83.2
Msa0239020 AT3G01080.1 40.206 97 47 4 304 395 163 253 1.55e-14 76.3
Msa0239020 AT2G47260.1 36.667 120 65 3 287 406 154 262 1.54e-16 81.3
Msa0239020 AT2G03340.1 53.030 66 30 1 303 368 410 474 1.87e-16 82.8
Msa0239020 AT2G03340.1 48.571 70 34 2 304 373 246 313 2.76e-13 72.8
Msa0239020 AT4G22070.4 50.000 60 30 0 309 368 298 357 5.92e-16 81.3
Msa0239020 AT4G22070.3 50.000 60 30 0 309 368 298 357 5.92e-16 81.3
Msa0239020 AT4G22070.2 50.000 60 30 0 309 368 298 357 5.92e-16 81.3
Msa0239020 AT4G22070.1 50.000 60 30 0 309 368 298 357 5.92e-16 81.3
Msa0239020 AT1G62300.1 50.000 60 30 0 309 368 313 372 6.03e-16 81.3
Msa0239020 AT1G69810.2 44.872 78 42 1 303 379 140 217 6.38e-16 79.3
Msa0239020 AT1G69810.1 45.833 72 38 1 309 379 204 275 8.16e-16 79.7
Msa0239020 AT4G04450.2 50.000 60 30 0 309 368 199 258 1.06e-15 79.7
Msa0239020 AT1G13960.1 51.515 66 31 1 303 368 404 468 1.09e-15 80.1
Msa0239020 AT1G13960.1 45.570 79 37 3 290 368 215 287 2.05e-13 73.2
Msa0239020 AT4G04450.1 50.000 60 30 0 309 368 293 352 1.73e-15 79.7
Msa0239020 AT2G38470.1 50.000 76 36 2 293 368 169 242 2.12e-15 79.3
Msa0239020 AT2G38470.1 55.000 60 26 1 309 368 363 421 5.82e-15 77.8
Msa0239020 AT1G13960.2 51.515 66 31 1 303 368 251 315 2.64e-15 78.2
Msa0239020 AT1G13960.2 44.578 83 40 3 290 372 62 138 7.44e-13 70.5
Msa0239020 AT4G18170.1 43.902 82 44 2 288 369 153 232 3.33e-15 77.0
Msa0239020 AT3G01080.3 40.206 97 47 4 304 395 201 291 3.36e-15 77.4
Msa0239020 AT4G26640.7 47.826 69 35 1 301 369 334 401 4.03e-15 78.6
Msa0239020 AT4G26640.7 37.143 105 59 4 306 407 169 269 4.12e-11 65.9
Msa0239020 AT4G26640.2 47.826 69 35 1 301 369 374 441 4.63e-15 78.6
Msa0239020 AT4G26640.2 37.143 105 59 4 306 407 209 309 4.36e-11 65.9
Msa0239020 AT1G29860.1 46.053 76 39 2 294 369 123 196 4.70e-15 76.3
Msa0239020 AT4G26640.1 47.826 69 35 1 301 369 302 369 5.27e-15 77.8
Msa0239020 AT4G26640.1 37.143 105 59 4 306 407 137 237 4.98e-11 65.5
Msa0239020 AT4G26640.5 47.826 69 35 1 301 369 198 265 5.64e-15 77.0
Msa0239020 AT4G26640.5 37.143 105 59 4 306 407 33 133 5.86e-11 64.7
Msa0239020 AT4G26640.6 47.826 69 35 1 301 369 198 265 5.64e-15 77.0
Msa0239020 AT4G26640.6 37.143 105 59 4 306 407 33 133 5.86e-11 64.7
Msa0239020 AT4G26640.4 47.826 69 35 1 301 369 198 265 5.64e-15 77.0
Msa0239020 AT4G26640.4 37.143 105 59 4 306 407 33 133 5.86e-11 64.7
Msa0239020 AT4G26640.3 47.826 69 35 1 301 369 198 265 5.64e-15 77.0
Msa0239020 AT4G26640.3 37.143 105 59 4 306 407 33 133 5.86e-11 64.7
Msa0239020 AT5G43290.1 55.000 60 26 1 306 365 112 170 6.98e-15 75.5
Msa0239020 AT2G04880.1 51.667 60 28 1 309 368 308 366 7.70e-15 77.4
Msa0239020 AT2G04880.2 51.667 60 28 1 309 368 284 342 8.24e-15 77.4
Msa0239020 AT1G18860.1 50.000 60 30 0 309 368 240 299 9.02e-15 77.4
Msa0239020 AT1G64000.1 44.444 63 34 1 303 365 109 170 1.40e-14 72.8
Msa0239020 AT5G15130.2 48.333 60 31 0 309 368 186 245 1.53e-14 76.6
Msa0239020 AT5G07100.1 45.833 72 38 1 305 376 231 301 1.55e-14 75.1
Msa0239020 AT5G07100.1 35.345 116 68 3 301 410 110 224 5.65e-13 70.5
Msa0239020 AT1G69310.4 39.130 92 54 2 285 376 125 214 1.58e-14 74.7
Msa0239020 AT1G69310.2 39.130 92 54 2 285 376 125 214 1.58e-14 74.7
Msa0239020 AT1G69310.1 39.130 92 54 2 285 376 125 214 1.58e-14 74.7
Msa0239020 AT1G80840.1 43.548 62 35 0 308 369 146 207 1.64e-14 74.7
Msa0239020 AT5G15130.1 48.333 60 31 0 309 368 228 287 1.73e-14 76.6
Msa0239020 AT1G68150.1 50.000 60 30 0 309 368 236 295 2.09e-14 75.5
Msa0239020 AT5G26170.1 50.000 64 31 1 303 366 108 170 2.14e-14 71.6
Msa0239020 AT5G46350.1 44.737 76 40 2 294 369 170 243 2.19e-14 74.7
Msa0239020 AT2G37260.1 40.476 84 46 2 285 365 323 405 2.90e-14 75.5
Msa0239020 AT2G37260.1 54.545 66 28 2 304 369 161 224 2.98e-14 75.5
Msa0239020 AT5G07100.2 48.529 68 34 1 309 376 142 208 3.44e-14 72.4
Msa0239020 AT5G07100.2 35.345 116 68 3 301 410 17 131 1.38e-12 67.8
Msa0239020 AT5G07100.4 48.529 68 34 1 309 376 142 208 3.44e-14 72.4
Msa0239020 AT5G07100.4 35.345 116 68 3 301 410 17 131 1.38e-12 67.8
Msa0239020 AT5G07100.5 48.529 68 34 1 309 376 142 208 3.44e-14 72.4
Msa0239020 AT5G07100.5 35.345 116 68 3 301 410 17 131 1.38e-12 67.8
Msa0239020 AT5G07100.3 48.529 68 34 1 309 376 142 208 3.44e-14 72.4
Msa0239020 AT5G07100.3 35.345 116 68 3 301 410 17 131 1.38e-12 67.8
Msa0239020 AT2G30250.1 50.820 61 29 1 309 369 329 388 3.45e-14 74.7
Msa0239020 AT2G30250.1 45.570 79 40 3 294 372 153 228 1.38e-12 70.1
Msa0239020 AT4G30935.1 47.692 65 33 1 309 373 332 395 3.88e-14 75.1
Msa0239020 AT4G31800.2 44.262 61 34 0 308 368 111 171 4.05e-14 72.8
Msa0239020 AT4G01720.1 48.333 60 31 0 309 368 240 299 4.36e-14 75.1
Msa0239020 AT2G37260.3 54.545 66 28 2 304 369 81 144 4.49e-14 73.9
Msa0239020 AT2G37260.3 40.476 84 46 2 285 365 243 325 4.79e-14 73.9
Msa0239020 AT2G37260.2 54.545 66 28 2 304 369 79 142 4.54e-14 73.9
Msa0239020 AT2G37260.2 40.476 84 46 2 285 365 241 323 4.93e-14 73.9
Msa0239020 AT5G56270.1 49.231 65 32 1 305 369 484 547 5.30e-14 75.5
Msa0239020 AT5G56270.1 50.000 66 31 2 307 372 272 335 3.52e-13 72.8
Msa0239020 AT5G41570.1 44.444 63 34 1 303 365 93 154 6.54e-14 70.5
Msa0239020 AT5G49520.1 48.333 60 30 1 309 368 222 280 8.60e-14 73.6
Msa0239020 AT4G31800.1 44.262 61 34 0 308 368 176 236 8.75e-14 72.8
Msa0239020 AT3G62340.1 38.636 88 46 3 309 395 119 199 1.20e-13 72.0
Msa0239020 AT4G26440.1 46.575 73 37 2 307 379 177 247 1.66e-13 73.6
Msa0239020 AT4G26440.1 42.254 71 40 1 309 379 373 442 1.51e-11 67.4
Msa0239020 AT2G44745.1 50.877 57 27 1 309 365 146 201 2.66e-13 69.7
Msa0239020 AT2G21900.1 47.541 61 31 1 309 369 110 169 7.00e-13 68.2
Msa0239020 AT1G55600.1 41.096 73 41 2 297 368 295 366 8.24e-13 71.2
Msa0239020 AT2G25000.2 42.623 61 35 0 308 368 103 163 1.07e-12 68.2
Msa0239020 AT2G25000.4 42.623 61 35 0 308 368 103 163 1.07e-12 68.2
Msa0239020 AT2G25000.3 42.623 61 35 0 308 368 125 185 1.24e-12 68.6
Msa0239020 AT5G45260.1 46.970 66 33 1 309 372 1209 1274 1.39e-12 71.2
Msa0239020 AT2G25000.1 42.623 61 35 0 308 368 146 206 3.46e-12 67.4
Msa0239020 AT3G01970.1 47.692 65 31 2 309 371 66 129 3.87e-12 64.7
Msa0239020 AT4G39410.1 40.845 71 39 2 298 366 211 280 4.16e-12 67.8
Msa0239020 AT5G13080.1 43.860 57 31 1 309 365 68 123 8.64e-12 63.5
Msa0239020 AT4G12020.5 31.250 176 92 7 304 478 397 544 1.40e-11 68.2
Msa0239020 AT4G12020.6 31.250 176 92 7 304 478 464 611 1.51e-11 67.8
Msa0239020 AT4G12020.8 31.250 176 92 7 304 478 464 611 1.51e-11 67.8
Msa0239020 AT4G12020.7 31.250 176 92 7 304 478 464 611 1.51e-11 67.8
Msa0239020 AT4G12020.1 31.250 176 92 7 304 478 464 611 1.64e-11 67.8
Msa0239020 AT4G12020.9 31.250 176 92 7 304 478 464 611 1.64e-11 67.8
Msa0239020 AT4G12020.10 31.250 176 92 7 304 478 464 611 1.84e-11 67.8
Msa0239020 AT4G12020.4 31.250 176 92 7 304 478 464 611 2.14e-11 67.4
Msa0239020 AT4G12020.2 31.250 176 92 7 304 478 464 611 2.17e-11 67.4
Msa0239020 AT4G12020.3 31.250 176 92 7 304 478 464 611 2.19e-11 67.4
Msa0239020 AT2G40740.1 39.286 84 46 2 285 363 147 230 2.20e-11 65.5
Msa0239020 AT2G40740.3 39.286 84 46 2 285 363 156 239 2.65e-11 65.1
Msa0239020 AT2G46130.1 45.614 57 30 1 309 365 31 86 4.71e-11 60.5
Msa0239020 AT4G12020.11 45.714 70 36 2 304 373 464 531 9.38e-11 65.5

Find 145 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACAAACATCACAAATTT+AGG 0.187343 2_2:+13034179 Msa0239020:CDS
GTTGGTGGTGCTGGTGGTGG+TGG 0.202175 2_2:-13032805 None:intergenic
CTCTCTAATAGTTCCATTTC+CGG 0.214380 2_2:-13034287 None:intergenic
AAATTTAGGTTCGCCTAATA+TGG 0.245558 2_2:+13034193 Msa0239020:CDS
GGTTGTGGTGGCAGTGATAA+TGG 0.263983 2_2:-13032946 None:intergenic
ATGAGTCCAGTTTCAGAATA+AGG 0.269380 2_2:-13034443 None:intergenic
GGTGGGGATGGTGGTGGTCA+AGG 0.277140 2_2:-13032841 None:intergenic
GGTGGTGCTGGTGGTGGTGG+GGG 0.282046 2_2:-13032802 None:intergenic
ATCTGTAACATCACCATATT+AGG 0.294748 2_2:-13034206 None:intergenic
TGGTGGTGCTGGTGGTGGTG+GGG 0.299381 2_2:-13032803 None:intergenic
GGTGATGTGGGTGGGGATGG+TGG 0.303024 2_2:-13032850 None:intergenic
TCGTGGGCGTGGAGGAAATA+TGG 0.318270 2_2:+13033642 Msa0239020:CDS
GAGTATTGGAAAATTATATT+TGG 0.320543 2_2:-13033291 None:intergenic
TGGGGATGGTGGTGGTCAAG+GGG 0.326902 2_2:-13032839 None:intergenic
TGATAGGGGTAGTGGTGGTC+GGG 0.328659 2_2:-13032980 None:intergenic
GTTGTGGTGGCAGTGATAAT+GGG 0.330481 2_2:-13032945 None:intergenic
ATGAAGTCATTTGGTTTAAG+TGG 0.330576 2_2:-13032690 None:intergenic
TTGGTGGTGCTGGTGGTGGT+GGG 0.333587 2_2:-13032804 None:intergenic
GTGGGGATGGTGGTGGTCAA+GGG 0.334475 2_2:-13032840 None:intergenic
ATAGTTCCATTTCCGGATAA+AGG 0.337415 2_2:-13034280 None:intergenic
ATCAATGCATGCAACAGGTT+TGG 0.338091 2_2:-13033135 None:intergenic
ATCAATGCATGCAACAGGTT+TGG 0.338091 2_2:-13033363 None:intergenic
TGAGATAGTGTTGGTGGTGC+TGG 0.338766 2_2:-13032814 None:intergenic
CACTATGCAGATCGAGAAAA+AGG 0.340622 2_2:+13033432 Msa0239020:CDS
AAGTATTCGAAAATTATAAT+TGG 0.344998 2_2:-13033063 None:intergenic
CAGTCTCTGGTGACTTGCGC+TGG 0.347837 2_2:-13034127 None:intergenic
GGGGATGGTGGTGGTCAAGG+GGG 0.349141 2_2:-13032838 None:intergenic
TGATTGGGGTAGTGGTGGTC+GGG 0.349837 2_2:-13033208 None:intergenic
AACCTCCCTTATTCTGAAAC+TGG 0.353308 2_2:+13034437 Msa0239020:CDS
TTGAGGGATTGTGATGTTAT+TGG 0.357016 2_2:-13032601 None:intergenic
TCAATGCATGCAACAGGTTT+GGG 0.360204 2_2:-13033134 None:intergenic
TCAATGCATGCAACAGGTTT+GGG 0.360204 2_2:-13033362 None:intergenic
GATGTGGGTGGGGATGGTGG+TGG 0.361535 2_2:-13032847 None:intergenic
TCTAGATCTATGAAGTCATT+TGG 0.366608 2_2:-13032699 None:intergenic
ATAATTGGTGGGATATTGAT+TGG 0.368833 2_2:-13033048 None:intergenic
TATTCTGAAACTGGACTCAT+TGG 0.369961 2_2:+13034446 Msa0239020:CDS
ATATTTGGTGAGATATTGAT+TGG 0.376688 2_2:-13033276 None:intergenic
GTTGGTGATGTGGGTGGGGA+TGG 0.376997 2_2:-13032853 None:intergenic
TCTGACCAAGCTGTTATGTT+TGG 0.377584 2_2:-13034500 None:intergenic
TTGGTCAGAAGATTATTTAA+TGG 0.378102 2_2:+13034514 Msa0239020:CDS
ATACTAGTGGTAGCTGGGGT+GGG 0.383161 2_2:-13032750 None:intergenic
TGCTCGTAGCAGATATGATT+GGG 0.388493 2_2:-13033223 None:intergenic
GTGATAGGGGTAGTGGTGGT+CGG 0.394478 2_2:-13032981 None:intergenic
GTGGTGGTGGTATTGAATTT+TGG 0.397057 2_2:-13032774 None:intergenic
AGTGGTAGCTGGGGTGGGGA+TGG 0.397195 2_2:-13032745 None:intergenic
CCACAAAGTAGGAATGTTAC+AGG 0.397474 2_2:+13034398 Msa0239020:CDS
GTGGTAGCTGGGGTGGGGAT+GGG 0.402056 2_2:-13032744 None:intergenic
TAATGTTGGTGATGTGGGTG+GGG 0.404886 2_2:-13032857 None:intergenic
CAAAATGGTGTGACACTTTG+AGG 0.405630 2_2:-13032618 None:intergenic
TTGATTGATCAGCGAGAACC+TGG 0.406949 2_2:-13034253 None:intergenic
TTTAATAAGAATGTTGTTGT+TGG 0.409716 2_2:+13034098 Msa0239020:CDS
TTAATGTTGGTGATGTGGGT+GGG 0.412823 2_2:-13032858 None:intergenic
GTGCTCGCAACAGATGTGAT+AGG 0.414305 2_2:-13032996 None:intergenic
AGTGTTGGTGGTGCTGGTGG+TGG 0.418934 2_2:-13032808 None:intergenic
CCTGTAACATTCCTACTTTG+TGG 0.419186 2_2:-13034398 None:intergenic
ACCCAAGTTTCTAAAATTTG+AGG 0.428675 2_2:-13034342 None:intergenic
GTGATATCAATGCATGCAAC+AGG 0.433021 2_2:-13033368 None:intergenic
GGAATGTTACAGGTGTTGTC+GGG 0.434516 2_2:+13034408 Msa0239020:CDS
ATGATTGGGGTAGTGGTGGT+CGG 0.440238 2_2:-13033209 None:intergenic
GTAAGATTATCAGAGCAAAA+TGG 0.441277 2_2:-13032633 None:intergenic
ACAACATTCTTATTAAATGT+TGG 0.443200 2_2:-13034092 None:intergenic
TTGTGGTGGCAGTGATAATG+GGG 0.443656 2_2:-13032944 None:intergenic
GTGCTCGTAGCAGATATGAT+TGG 0.445306 2_2:-13033224 None:intergenic
TTAAGTGGGGCAAAAGAGAC+TGG 0.447663 2_2:-13032675 None:intergenic
TGAGTCCAGTTTCAGAATAA+GGG 0.453523 2_2:-13034442 None:intergenic
TATAACACATCAATGCCATT+TGG 0.456145 2_2:-13033593 None:intergenic
CAGCGCAAGTCACCAGAGAC+TGG 0.456474 2_2:+13034128 Msa0239020:CDS
CATACTAGTGGTAGCTGGGG+TGG 0.457766 2_2:-13032751 None:intergenic
TACTAGTGGTAGCTGGGGTG+GGG 0.460033 2_2:-13032749 None:intergenic
GTGATATCAATGCATGCAAC+AGG 0.463584 2_2:-13033140 None:intergenic
GGGAGTGGTGGGAGTAGTGA+TGG 0.464500 2_2:-13032910 None:intergenic
GATCCAACTTCTTCGACAAC+AGG 0.468621 2_2:-13034317 None:intergenic
TGTTGTTGTCCAGCGAGTAT+TGG 0.468656 2_2:-13033305 None:intergenic
GTTAATGTTGGTGATGTGGG+TGG 0.469111 2_2:-13032859 None:intergenic
ACCTGGGCATTGCTGCTCTC+CGG 0.469412 2_2:-13034236 None:intergenic
AGCAGATATGATTGGGGTAG+TGG 0.472211 2_2:-13033216 None:intergenic
TTACCTGTTGTCGAAGAAGT+TGG 0.474676 2_2:+13034314 Msa0239020:CDS
CGGGGTGATTATAGTGGTTG+TGG 0.477731 2_2:-13032961 None:intergenic
GGTAATGGTAGAGGGAGTGG+TGG 0.480162 2_2:-13032922 None:intergenic
TGAAGTCATTTGGTTTAAGT+GGG 0.485609 2_2:-13032689 None:intergenic
TATTCGAAAATTATAATTGG+TGG 0.490355 2_2:-13033060 None:intergenic
GATGTTACAGATTGATCATC+CGG 0.490780 2_2:+13034217 Msa0239020:CDS
TTACACTCTGCAGAAGAAGC+TGG 0.498625 2_2:+13034152 Msa0239020:CDS
ATGGACTTCAACCGCCTCAA+TGG 0.499646 2_2:+13034533 Msa0239020:CDS
TTGGCATACTAGTGGTAGCT+GGG 0.501077 2_2:-13032755 None:intergenic
TGCTCGCAACAGATGTGATA+GGG 0.504965 2_2:-13032995 None:intergenic
ACTTATATTGTGACATATGA+AGG 0.505269 2_2:+13034050 Msa0239020:CDS
AGGAATGTTACAGGTGTTGT+CGG 0.507063 2_2:+13034407 Msa0239020:CDS
TGGCATTGATGTGTTATATG+AGG 0.512049 2_2:+13033598 Msa0239020:CDS
GCAGAGTGTAATCCAGTCTC+TGG 0.513748 2_2:-13034140 None:intergenic
AGTGGTGGGAGTAGTGATGG+TGG 0.515197 2_2:-13032907 None:intergenic
TTTGGCATACTAGTGGTAGC+TGG 0.515752 2_2:-13032756 None:intergenic
ATTCGAAAATTATAATTGGT+GGG 0.515904 2_2:-13033059 None:intergenic
TAGAAAACATAATAACCAAA+TGG 0.516057 2_2:+13033578 Msa0239020:intron
AGTCTCTGGTGACTTGCGCT+GGG 0.516218 2_2:-13034126 None:intergenic
GTGGTGGGAGTAGTGATGGT+GGG 0.519264 2_2:-13032906 None:intergenic
GAGTAGTGATGGTGGGAGTG+TGG 0.520200 2_2:-13032899 None:intergenic
GATTGGGGTAGTGGTGGTCG+GGG 0.520285 2_2:-13033207 None:intergenic
AAAATGGTGTGACACTTTGA+GGG 0.520400 2_2:-13032617 None:intergenic
GGTGTTAATGTTGGTGATGT+GGG 0.527208 2_2:-13032862 None:intergenic
AACAGATGTGATAGGGGTAG+TGG 0.528816 2_2:-13032988 None:intergenic
TCCGGAGAGCAGCAATGCCC+AGG 0.531466 2_2:+13034235 Msa0239020:CDS
TGGTGTTAATGTTGGTGATG+TGG 0.531937 2_2:-13032863 None:intergenic
GATAGGGGTAGTGGTGGTCG+GGG 0.546614 2_2:-13032979 None:intergenic
GGTGGTCGGGGTGATTATAG+TGG 0.549679 2_2:-13032967 None:intergenic
TTTCAAAAGACTCGTGGGCG+TGG 0.554710 2_2:+13033631 Msa0239020:CDS
GTAATGGTAGAGGGAGTGGT+GGG 0.555015 2_2:-13032921 None:intergenic
TGATACCAAACATAACAGCT+TGG 0.570214 2_2:+13034495 Msa0239020:CDS
TTAAAGGGTCTCCACATCCA+AGG 0.571232 2_2:+13033676 Msa0239020:CDS
TGATTGTCCAGCAAGAAGAA+AGG 0.574441 2_2:+13034001 Msa0239020:CDS
TGGCATACTAGTGGTAGCTG+GGG 0.588013 2_2:-13032754 None:intergenic
TCGGGGTGATAGCTGATGGA+TGG 0.591717 2_2:-13033190 None:intergenic
GATAGTGTTGGTGGTGCTGG+TGG 0.594465 2_2:-13032811 None:intergenic
GACTTCAACCGCCTCAATGG+TGG 0.595091 2_2:+13034536 Msa0239020:CDS
GGAATATAGCACCACCATTG+AGG 0.603269 2_2:-13034547 None:intergenic
AATTTGATGAACCACAAAGT+AGG 0.604187 2_2:+13034387 Msa0239020:CDS
ATGAACACTAGTCTTTGTCA+TGG 0.605141 2_2:-13033249 None:intergenic
ATGAACACTGGTGTTAATGT+TGG 0.608499 2_2:-13032871 None:intergenic
GGCATTGATGTGTTATATGA+GGG 0.611463 2_2:+13033599 Msa0239020:CDS
GTGGTCGGGGTGATAGCTGA+TGG 0.611835 2_2:-13033194 None:intergenic
ATGAACACTAGTGTTTGTCA+TGG 0.612356 2_2:-13033021 None:intergenic
GTCCAGTTTCAGAATAAGGG+AGG 0.616537 2_2:-13034439 None:intergenic
GAAGTCATTTGGTTTAAGTG+GGG 0.620194 2_2:-13032688 None:intergenic
ATATGTGTAAACCTTGGATG+TGG 0.620653 2_2:-13033687 None:intergenic
GCTATTACAAATGTAGCACT+TGG 0.620926 2_2:+13033976 Msa0239020:CDS
TGCATAGTGCAACTGATGGA+TGG 0.623878 2_2:-13033418 None:intergenic
CAAAAGACTCGTGGGCGTGG+AGG 0.623998 2_2:+13033634 Msa0239020:CDS
CTCTGGTGACTTGCGCTGGG+AGG 0.626715 2_2:-13034123 None:intergenic
TGAGCTTTCAAAAGACTCGT+GGG 0.628685 2_2:+13033626 Msa0239020:CDS
ATTGATGTGTTATATGAGGG+AGG 0.631085 2_2:+13033602 Msa0239020:CDS
GATCTGCATAGTGCAACTGA+TGG 0.634706 2_2:-13033422 None:intergenic
GAATGTTACAGGTGTTGTCG+GGG 0.638149 2_2:+13034409 Msa0239020:CDS
ATGAGCTTTCAAAAGACTCG+TGG 0.638619 2_2:+13033625 Msa0239020:CDS
AGATGTGATAGGGGTAGTGG+TGG 0.641506 2_2:-13032985 None:intergenic
AGATATGATTGGGGTAGTGG+TGG 0.642708 2_2:-13033213 None:intergenic
TGATTGATCAGCGAGAACCT+GGG 0.643075 2_2:-13034252 None:intergenic
GGTGATTATAGTGGTTGTGG+TGG 0.648806 2_2:-13032958 None:intergenic
GTATGCACGTTCAAAATGAG+CGG 0.654003 2_2:-13033393 None:intergenic
GCTCGCAACAGATGTGATAG+GGG 0.666943 2_2:-13032994 None:intergenic
GTATGCACATTCAAAATGAG+TGG 0.673260 2_2:-13033165 None:intergenic
TATGCACATTCAAAATGAGT+GGG 0.679056 2_2:-13033164 None:intergenic
ATATAGCACCACCATTGAGG+CGG 0.679111 2_2:-13034544 None:intergenic
TGTGGTGGCAGTGATAATGG+GGG 0.691274 2_2:-13032943 None:intergenic
GCTCGTAGCAGATATGATTG+GGG 0.709067 2_2:-13033222 None:intergenic
AGTGTGGATAACATGAACAC+TGG 0.712481 2_2:-13032883 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTATTCGAAAATTATAAT+TGG - chr2_2:13033066-13033085 None:intergenic 15.0%
!!! ATTTTGAAAACATCAAAAAT+TGG + chr2_2:13033898-13033917 Msa0239020:intron 15.0%
!! AAGTATTCGAAAATTATAAT+TGG - chr2_2:13033066-13033085 None:intergenic 15.0%
!!! ATTTTGAAAACATCAAAAAT+TGG + chr2_2:13033898-13033917 Msa0239020:intron 15.0%
!! ATTCGAAAATTATAATTGGT+GGG - chr2_2:13033062-13033081 None:intergenic 20.0%
!! TATTCGAAAATTATAATTGG+TGG - chr2_2:13033063-13033082 None:intergenic 20.0%
!!! GAGTATTGGAAAATTATATT+TGG - chr2_2:13033294-13033313 None:intergenic 20.0%
!!! TGTTTTCTATAAGAAAAGAA+AGG - chr2_2:13033567-13033586 None:intergenic 20.0%
!! TAGAAAACATAATAACCAAA+TGG + chr2_2:13033578-13033597 Msa0239020:intron 20.0%
!! ATTTCTTTCAACATCATTTA+TGG - chr2_2:13033936-13033955 None:intergenic 20.0%
!! ACAACATTCTTATTAAATGT+TGG - chr2_2:13034095-13034114 None:intergenic 20.0%
!! TTTAATAAGAATGTTGTTGT+TGG + chr2_2:13034098-13034117 Msa0239020:CDS 20.0%
!! ATTCGAAAATTATAATTGGT+GGG - chr2_2:13033062-13033081 None:intergenic 20.0%
!! TATTCGAAAATTATAATTGG+TGG - chr2_2:13033063-13033082 None:intergenic 20.0%
!!! GAGTATTGGAAAATTATATT+TGG - chr2_2:13033294-13033313 None:intergenic 20.0%
!!! TGTTTTCTATAAGAAAAGAA+AGG - chr2_2:13033567-13033586 None:intergenic 20.0%
!! TAGAAAACATAATAACCAAA+TGG + chr2_2:13033578-13033597 Msa0239020:intron 20.0%
!! ATTTCTTTCAACATCATTTA+TGG - chr2_2:13033936-13033955 None:intergenic 20.0%
!! ACAACATTCTTATTAAATGT+TGG - chr2_2:13034095-13034114 None:intergenic 20.0%
!! TTTAATAAGAATGTTGTTGT+TGG + chr2_2:13034098-13034117 Msa0239020:CDS 20.0%
!! TATAATTTTCGAATACTTGC+TGG + chr2_2:13033068-13033087 Msa0239020:CDS 25.0%
!! ATATTTGGTGAGATATTGAT+TGG - chr2_2:13033279-13033298 None:intergenic 25.0%
! TATGGACAAAAAGCTATTAA+AGG + chr2_2:13033660-13033679 Msa0239020:CDS 25.0%
! ATGGACAAAAAGCTATTAAA+GGG + chr2_2:13033661-13033680 Msa0239020:CDS 25.0%
!! TTTTGAATATGTGTAAACCT+TGG - chr2_2:13033696-13033715 None:intergenic 25.0%
! TTGTTACATAAAACAAACAC+TGG + chr2_2:13033765-13033784 Msa0239020:intron 25.0%
! TACAATTATATGCACTAACA+AGG - chr2_2:13033830-13033849 None:intergenic 25.0%
! AACACATCTTATCTTAATCA+TGG + chr2_2:13033859-13033878 Msa0239020:intron 25.0%
! AAATCAATAAATGATGTTGC+AGG + chr2_2:13033952-13033971 Msa0239020:intron 25.0%
! ACTTATATTGTGACATATGA+AGG + chr2_2:13034050-13034069 Msa0239020:CDS 25.0%
! TCTACAAACATCACAAATTT+AGG + chr2_2:13034179-13034198 Msa0239020:CDS 25.0%
! TCAATCAAAAATCCTTTATC+CGG + chr2_2:13034268-13034287 Msa0239020:CDS 25.0%
!!! ATCCTCAAATTTTAGAAACT+TGG + chr2_2:13034340-13034359 Msa0239020:CDS 25.0%
!!! TCCTCAAATTTTAGAAACTT+GGG + chr2_2:13034341-13034360 Msa0239020:CDS 25.0%
! TTGGTCAGAAGATTATTTAA+TGG + chr2_2:13034514-13034533 Msa0239020:CDS 25.0%
!! TATAATTTTCGAATACTTGC+TGG + chr2_2:13033068-13033087 Msa0239020:CDS 25.0%
!! ATATTTGGTGAGATATTGAT+TGG - chr2_2:13033279-13033298 None:intergenic 25.0%
! TATGGACAAAAAGCTATTAA+AGG + chr2_2:13033660-13033679 Msa0239020:CDS 25.0%
! ATGGACAAAAAGCTATTAAA+GGG + chr2_2:13033661-13033680 Msa0239020:CDS 25.0%
!! TTTTGAATATGTGTAAACCT+TGG - chr2_2:13033696-13033715 None:intergenic 25.0%
! TTGTTACATAAAACAAACAC+TGG + chr2_2:13033765-13033784 Msa0239020:intron 25.0%
! TACAATTATATGCACTAACA+AGG - chr2_2:13033830-13033849 None:intergenic 25.0%
! AACACATCTTATCTTAATCA+TGG + chr2_2:13033859-13033878 Msa0239020:intron 25.0%
! AAATCAATAAATGATGTTGC+AGG + chr2_2:13033952-13033971 Msa0239020:intron 25.0%
! ACTTATATTGTGACATATGA+AGG + chr2_2:13034050-13034069 Msa0239020:CDS 25.0%
! TCTACAAACATCACAAATTT+AGG + chr2_2:13034179-13034198 Msa0239020:CDS 25.0%
! TCAATCAAAAATCCTTTATC+CGG + chr2_2:13034268-13034287 Msa0239020:CDS 25.0%
!!! ATCCTCAAATTTTAGAAACT+TGG + chr2_2:13034340-13034359 Msa0239020:CDS 25.0%
!!! TCCTCAAATTTTAGAAACTT+GGG + chr2_2:13034341-13034360 Msa0239020:CDS 25.0%
! TTGGTCAGAAGATTATTTAA+TGG + chr2_2:13034514-13034533 Msa0239020:CDS 25.0%
GTAAGATTATCAGAGCAAAA+TGG - chr2_2:13032636-13032655 None:intergenic 30.0%
! TGAAGTCATTTGGTTTAAGT+GGG - chr2_2:13032692-13032711 None:intergenic 30.0%
! ATGAAGTCATTTGGTTTAAG+TGG - chr2_2:13032693-13032712 None:intergenic 30.0%
TCTAGATCTATGAAGTCATT+TGG - chr2_2:13032702-13032721 None:intergenic 30.0%
!! ATTGAATTTTGGCATACTAG+TGG - chr2_2:13032766-13032785 None:intergenic 30.0%
ATAATTGGTGGGATATTGAT+TGG - chr2_2:13033051-13033070 None:intergenic 30.0%
TATGCACATTCAAAATGAGT+GGG - chr2_2:13033167-13033186 None:intergenic 30.0%
! TATAATTTTCCAATACTCGC+TGG + chr2_2:13033296-13033315 Msa0239020:CDS 30.0%
TATAACACATCAATGCCATT+TGG - chr2_2:13033596-13033615 None:intergenic 30.0%
!!! AATCACCTTTTAAAACACGA+CGG - chr2_2:13033793-13033812 None:intergenic 30.0%
! AAATTTAGGTTCGCCTAATA+TGG + chr2_2:13034193-13034212 Msa0239020:CDS 30.0%
ATCTGTAACATCACCATATT+AGG - chr2_2:13034209-13034228 None:intergenic 30.0%
AAAAATCCTTTATCCGGAAA+TGG + chr2_2:13034274-13034293 Msa0239020:CDS 30.0%
!! ACCCAAGTTTCTAAAATTTG+AGG - chr2_2:13034345-13034364 None:intergenic 30.0%
AATTTGATGAACCACAAAGT+AGG + chr2_2:13034387-13034406 Msa0239020:CDS 30.0%
GTAAGATTATCAGAGCAAAA+TGG - chr2_2:13032636-13032655 None:intergenic 30.0%
! TGAAGTCATTTGGTTTAAGT+GGG - chr2_2:13032692-13032711 None:intergenic 30.0%
! ATGAAGTCATTTGGTTTAAG+TGG - chr2_2:13032693-13032712 None:intergenic 30.0%
TCTAGATCTATGAAGTCATT+TGG - chr2_2:13032702-13032721 None:intergenic 30.0%
!! ATTGAATTTTGGCATACTAG+TGG - chr2_2:13032766-13032785 None:intergenic 30.0%
ATAATTGGTGGGATATTGAT+TGG - chr2_2:13033051-13033070 None:intergenic 30.0%
TATGCACATTCAAAATGAGT+GGG - chr2_2:13033167-13033186 None:intergenic 30.0%
! TATAATTTTCCAATACTCGC+TGG + chr2_2:13033296-13033315 Msa0239020:CDS 30.0%
TATAACACATCAATGCCATT+TGG - chr2_2:13033596-13033615 None:intergenic 30.0%
!!! AATCACCTTTTAAAACACGA+CGG - chr2_2:13033793-13033812 None:intergenic 30.0%
! AAATTTAGGTTCGCCTAATA+TGG + chr2_2:13034193-13034212 Msa0239020:CDS 30.0%
ATCTGTAACATCACCATATT+AGG - chr2_2:13034209-13034228 None:intergenic 30.0%
AAAAATCCTTTATCCGGAAA+TGG + chr2_2:13034274-13034293 Msa0239020:CDS 30.0%
!! ACCCAAGTTTCTAAAATTTG+AGG - chr2_2:13034345-13034364 None:intergenic 30.0%
AATTTGATGAACCACAAAGT+AGG + chr2_2:13034387-13034406 Msa0239020:CDS 30.0%
TTGAGGGATTGTGATGTTAT+TGG - chr2_2:13032604-13032623 None:intergenic 35.0%
AAAATGGTGTGACACTTTGA+GGG - chr2_2:13032620-13032639 None:intergenic 35.0%
! AAGAGACTGGACTATTTTCT+TGG - chr2_2:13032665-13032684 None:intergenic 35.0%
! GAAGTCATTTGGTTTAAGTG+GGG - chr2_2:13032691-13032710 None:intergenic 35.0%
! ATGAACACTGGTGTTAATGT+TGG - chr2_2:13032874-13032893 None:intergenic 35.0%
ATGAACACTAGTGTTTGTCA+TGG - chr2_2:13033024-13033043 None:intergenic 35.0%
GTATGCACATTCAAAATGAG+TGG - chr2_2:13033168-13033187 None:intergenic 35.0%
!! ATGAACACTAGTCTTTGTCA+TGG - chr2_2:13033252-13033271 None:intergenic 35.0%
!! TGGCATTGATGTGTTATATG+AGG + chr2_2:13033598-13033617 Msa0239020:CDS 35.0%
!! GGCATTGATGTGTTATATGA+GGG + chr2_2:13033599-13033618 Msa0239020:CDS 35.0%
ATTGATGTGTTATATGAGGG+AGG + chr2_2:13033602-13033621 Msa0239020:CDS 35.0%
ATATGTGTAAACCTTGGATG+TGG - chr2_2:13033690-13033709 None:intergenic 35.0%
GCTATTACAAATGTAGCACT+TGG + chr2_2:13033976-13033995 Msa0239020:CDS 35.0%
! TTTTCAACCTTTCTTCTTGC+TGG - chr2_2:13034011-13034030 None:intergenic 35.0%
GATGTTACAGATTGATCATC+CGG + chr2_2:13034217-13034236 Msa0239020:CDS 35.0%
ATAGTTCCATTTCCGGATAA+AGG - chr2_2:13034283-13034302 None:intergenic 35.0%
CTCTCTAATAGTTCCATTTC+CGG - chr2_2:13034290-13034309 None:intergenic 35.0%
TGAGTCCAGTTTCAGAATAA+GGG - chr2_2:13034445-13034464 None:intergenic 35.0%
ATGAGTCCAGTTTCAGAATA+AGG - chr2_2:13034446-13034465 None:intergenic 35.0%
!! TATTCTGAAACTGGACTCAT+TGG + chr2_2:13034446-13034465 Msa0239020:CDS 35.0%
TGATACCAAACATAACAGCT+TGG + chr2_2:13034495-13034514 Msa0239020:CDS 35.0%
TTGAGGGATTGTGATGTTAT+TGG - chr2_2:13032604-13032623 None:intergenic 35.0%
AAAATGGTGTGACACTTTGA+GGG - chr2_2:13032620-13032639 None:intergenic 35.0%
! AAGAGACTGGACTATTTTCT+TGG - chr2_2:13032665-13032684 None:intergenic 35.0%
! GAAGTCATTTGGTTTAAGTG+GGG - chr2_2:13032691-13032710 None:intergenic 35.0%
! ATGAACACTGGTGTTAATGT+TGG - chr2_2:13032874-13032893 None:intergenic 35.0%
ATGAACACTAGTGTTTGTCA+TGG - chr2_2:13033024-13033043 None:intergenic 35.0%
GTATGCACATTCAAAATGAG+TGG - chr2_2:13033168-13033187 None:intergenic 35.0%
!! ATGAACACTAGTCTTTGTCA+TGG - chr2_2:13033252-13033271 None:intergenic 35.0%
!! TGGCATTGATGTGTTATATG+AGG + chr2_2:13033598-13033617 Msa0239020:CDS 35.0%
!! GGCATTGATGTGTTATATGA+GGG + chr2_2:13033599-13033618 Msa0239020:CDS 35.0%
ATTGATGTGTTATATGAGGG+AGG + chr2_2:13033602-13033621 Msa0239020:CDS 35.0%
ATATGTGTAAACCTTGGATG+TGG - chr2_2:13033690-13033709 None:intergenic 35.0%
GCTATTACAAATGTAGCACT+TGG + chr2_2:13033976-13033995 Msa0239020:CDS 35.0%
! TTTTCAACCTTTCTTCTTGC+TGG - chr2_2:13034011-13034030 None:intergenic 35.0%
GATGTTACAGATTGATCATC+CGG + chr2_2:13034217-13034236 Msa0239020:CDS 35.0%
ATAGTTCCATTTCCGGATAA+AGG - chr2_2:13034283-13034302 None:intergenic 35.0%
CTCTCTAATAGTTCCATTTC+CGG - chr2_2:13034290-13034309 None:intergenic 35.0%
TGAGTCCAGTTTCAGAATAA+GGG - chr2_2:13034445-13034464 None:intergenic 35.0%
ATGAGTCCAGTTTCAGAATA+AGG - chr2_2:13034446-13034465 None:intergenic 35.0%
!! TATTCTGAAACTGGACTCAT+TGG + chr2_2:13034446-13034465 Msa0239020:CDS 35.0%
TGATACCAAACATAACAGCT+TGG + chr2_2:13034495-13034514 Msa0239020:CDS 35.0%
CAAAATGGTGTGACACTTTG+AGG - chr2_2:13032621-13032640 None:intergenic 40.0%
!!! GTGGTGGTGGTATTGAATTT+TGG - chr2_2:13032777-13032796 None:intergenic 40.0%
!! TTAATGTTGGTGATGTGGGT+GGG - chr2_2:13032861-13032880 None:intergenic 40.0%
!! GGTGTTAATGTTGGTGATGT+GGG - chr2_2:13032865-13032884 None:intergenic 40.0%
!! TGGTGTTAATGTTGGTGATG+TGG - chr2_2:13032866-13032885 None:intergenic 40.0%
AGTGTGGATAACATGAACAC+TGG - chr2_2:13032886-13032905 None:intergenic 40.0%
! ATAATGGGGGTAATGGTAGA+GGG - chr2_2:13032933-13032952 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG - chr2_2:13033137-13033156 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG - chr2_2:13033138-13033157 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG - chr2_2:13033143-13033162 None:intergenic 40.0%
TGCTCGTAGCAGATATGATT+GGG - chr2_2:13033226-13033245 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG - chr2_2:13033137-13033156 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG - chr2_2:13033138-13033157 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG - chr2_2:13033143-13033162 None:intergenic 40.0%
GTATGCACGTTCAAAATGAG+CGG - chr2_2:13033396-13033415 None:intergenic 40.0%
CACTATGCAGATCGAGAAAA+AGG + chr2_2:13033432-13033451 Msa0239020:CDS 40.0%
ATGAGCTTTCAAAAGACTCG+TGG + chr2_2:13033625-13033644 Msa0239020:CDS 40.0%
TGAGCTTTCAAAAGACTCGT+GGG + chr2_2:13033626-13033645 Msa0239020:CDS 40.0%
TGATTGTCCAGCAAGAAGAA+AGG + chr2_2:13034001-13034020 Msa0239020:CDS 40.0%
TTACCTGTTGTCGAAGAAGT+TGG + chr2_2:13034314-13034333 Msa0239020:CDS 40.0%
CCTGTAACATTCCTACTTTG+TGG - chr2_2:13034401-13034420 None:intergenic 40.0%
CCACAAAGTAGGAATGTTAC+AGG + chr2_2:13034398-13034417 Msa0239020:CDS 40.0%
! AGGAATGTTACAGGTGTTGT+CGG + chr2_2:13034407-13034426 Msa0239020:CDS 40.0%
!! AACCTCCCTTATTCTGAAAC+TGG + chr2_2:13034437-13034456 Msa0239020:CDS 40.0%
TCTGACCAAGCTGTTATGTT+TGG - chr2_2:13034503-13034522 None:intergenic 40.0%
CAAAATGGTGTGACACTTTG+AGG - chr2_2:13032621-13032640 None:intergenic 40.0%
!!! GTGGTGGTGGTATTGAATTT+TGG - chr2_2:13032777-13032796 None:intergenic 40.0%
!! TTAATGTTGGTGATGTGGGT+GGG - chr2_2:13032861-13032880 None:intergenic 40.0%
!! GGTGTTAATGTTGGTGATGT+GGG - chr2_2:13032865-13032884 None:intergenic 40.0%
!! TGGTGTTAATGTTGGTGATG+TGG - chr2_2:13032866-13032885 None:intergenic 40.0%
AGTGTGGATAACATGAACAC+TGG - chr2_2:13032886-13032905 None:intergenic 40.0%
! ATAATGGGGGTAATGGTAGA+GGG - chr2_2:13032933-13032952 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG - chr2_2:13033137-13033156 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG - chr2_2:13033138-13033157 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG - chr2_2:13033143-13033162 None:intergenic 40.0%
TGCTCGTAGCAGATATGATT+GGG - chr2_2:13033226-13033245 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG - chr2_2:13033137-13033156 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG - chr2_2:13033138-13033157 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG - chr2_2:13033143-13033162 None:intergenic 40.0%
GTATGCACGTTCAAAATGAG+CGG - chr2_2:13033396-13033415 None:intergenic 40.0%
CACTATGCAGATCGAGAAAA+AGG + chr2_2:13033432-13033451 Msa0239020:CDS 40.0%
ATGAGCTTTCAAAAGACTCG+TGG + chr2_2:13033625-13033644 Msa0239020:CDS 40.0%
TGAGCTTTCAAAAGACTCGT+GGG + chr2_2:13033626-13033645 Msa0239020:CDS 40.0%
TGATTGTCCAGCAAGAAGAA+AGG + chr2_2:13034001-13034020 Msa0239020:CDS 40.0%
TTACCTGTTGTCGAAGAAGT+TGG + chr2_2:13034314-13034333 Msa0239020:CDS 40.0%
CCTGTAACATTCCTACTTTG+TGG - chr2_2:13034401-13034420 None:intergenic 40.0%
CCACAAAGTAGGAATGTTAC+AGG + chr2_2:13034398-13034417 Msa0239020:CDS 40.0%
! AGGAATGTTACAGGTGTTGT+CGG + chr2_2:13034407-13034426 Msa0239020:CDS 40.0%
!! AACCTCCCTTATTCTGAAAC+TGG + chr2_2:13034437-13034456 Msa0239020:CDS 40.0%
TCTGACCAAGCTGTTATGTT+TGG - chr2_2:13034503-13034522 None:intergenic 40.0%
TTAAGTGGGGCAAAAGAGAC+TGG - chr2_2:13032678-13032697 None:intergenic 45.0%
TTGGCATACTAGTGGTAGCT+GGG - chr2_2:13032758-13032777 None:intergenic 45.0%
TTTGGCATACTAGTGGTAGC+TGG - chr2_2:13032759-13032778 None:intergenic 45.0%
!! TAATGTTGGTGATGTGGGTG+GGG - chr2_2:13032860-13032879 None:intergenic 45.0%
!! GTTAATGTTGGTGATGTGGG+TGG - chr2_2:13032862-13032881 None:intergenic 45.0%
!! GATAATGGGGGTAATGGTAG+AGG - chr2_2:13032934-13032953 None:intergenic 45.0%
! TTGTGGTGGCAGTGATAATG+GGG - chr2_2:13032947-13032966 None:intergenic 45.0%
GTTGTGGTGGCAGTGATAAT+GGG - chr2_2:13032948-13032967 None:intergenic 45.0%
GGTGATTATAGTGGTTGTGG+TGG - chr2_2:13032961-13032980 None:intergenic 45.0%
AACAGATGTGATAGGGGTAG+TGG - chr2_2:13032991-13033010 None:intergenic 45.0%
TGCTCGCAACAGATGTGATA+GGG - chr2_2:13032998-13033017 None:intergenic 45.0%
! AGATATGATTGGGGTAGTGG+TGG - chr2_2:13033216-13033235 None:intergenic 45.0%
AGCAGATATGATTGGGGTAG+TGG - chr2_2:13033219-13033238 None:intergenic 45.0%
GCTCGTAGCAGATATGATTG+GGG - chr2_2:13033225-13033244 None:intergenic 45.0%
GTGCTCGTAGCAGATATGAT+TGG - chr2_2:13033227-13033246 None:intergenic 45.0%
TGTTGTTGTCCAGCGAGTAT+TGG - chr2_2:13033308-13033327 None:intergenic 45.0%
TGCATAGTGCAACTGATGGA+TGG - chr2_2:13033421-13033440 None:intergenic 45.0%
GATCTGCATAGTGCAACTGA+TGG - chr2_2:13033425-13033444 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG + chr2_2:13033676-13033695 Msa0239020:CDS 45.0%
!! TGGCACCGTCGTGTTTTAAA+AGG + chr2_2:13033785-13033804 Msa0239020:intron 45.0%
TTACACTCTGCAGAAGAAGC+TGG + chr2_2:13034152-13034171 Msa0239020:CDS 45.0%
TGATTGATCAGCGAGAACCT+GGG - chr2_2:13034255-13034274 None:intergenic 45.0%
TTGATTGATCAGCGAGAACC+TGG - chr2_2:13034256-13034275 None:intergenic 45.0%
GATCCAACTTCTTCGACAAC+AGG - chr2_2:13034320-13034339 None:intergenic 45.0%
! GGAATGTTACAGGTGTTGTC+GGG + chr2_2:13034408-13034427 Msa0239020:CDS 45.0%
! GAATGTTACAGGTGTTGTCG+GGG + chr2_2:13034409-13034428 Msa0239020:CDS 45.0%
GTCCAGTTTCAGAATAAGGG+AGG - chr2_2:13034442-13034461 None:intergenic 45.0%
ATATAGCACCACCATTGAGG+CGG - chr2_2:13034547-13034566 None:intergenic 45.0%
GGAATATAGCACCACCATTG+AGG - chr2_2:13034550-13034569 None:intergenic 45.0%
TTAAGTGGGGCAAAAGAGAC+TGG - chr2_2:13032678-13032697 None:intergenic 45.0%
TTGGCATACTAGTGGTAGCT+GGG - chr2_2:13032758-13032777 None:intergenic 45.0%
TTTGGCATACTAGTGGTAGC+TGG - chr2_2:13032759-13032778 None:intergenic 45.0%
!! TAATGTTGGTGATGTGGGTG+GGG - chr2_2:13032860-13032879 None:intergenic 45.0%
!! GTTAATGTTGGTGATGTGGG+TGG - chr2_2:13032862-13032881 None:intergenic 45.0%
!! GATAATGGGGGTAATGGTAG+AGG - chr2_2:13032934-13032953 None:intergenic 45.0%
! TTGTGGTGGCAGTGATAATG+GGG - chr2_2:13032947-13032966 None:intergenic 45.0%
GTTGTGGTGGCAGTGATAAT+GGG - chr2_2:13032948-13032967 None:intergenic 45.0%
GGTGATTATAGTGGTTGTGG+TGG - chr2_2:13032961-13032980 None:intergenic 45.0%
AACAGATGTGATAGGGGTAG+TGG - chr2_2:13032991-13033010 None:intergenic 45.0%
TGCTCGCAACAGATGTGATA+GGG - chr2_2:13032998-13033017 None:intergenic 45.0%
! AGATATGATTGGGGTAGTGG+TGG - chr2_2:13033216-13033235 None:intergenic 45.0%
AGCAGATATGATTGGGGTAG+TGG - chr2_2:13033219-13033238 None:intergenic 45.0%
GCTCGTAGCAGATATGATTG+GGG - chr2_2:13033225-13033244 None:intergenic 45.0%
GTGCTCGTAGCAGATATGAT+TGG - chr2_2:13033227-13033246 None:intergenic 45.0%
TGTTGTTGTCCAGCGAGTAT+TGG - chr2_2:13033308-13033327 None:intergenic 45.0%
TGCATAGTGCAACTGATGGA+TGG - chr2_2:13033421-13033440 None:intergenic 45.0%
GATCTGCATAGTGCAACTGA+TGG - chr2_2:13033425-13033444 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG + chr2_2:13033676-13033695 Msa0239020:CDS 45.0%
!! TGGCACCGTCGTGTTTTAAA+AGG + chr2_2:13033785-13033804 Msa0239020:intron 45.0%
TTACACTCTGCAGAAGAAGC+TGG + chr2_2:13034152-13034171 Msa0239020:CDS 45.0%
TGATTGATCAGCGAGAACCT+GGG - chr2_2:13034255-13034274 None:intergenic 45.0%
TTGATTGATCAGCGAGAACC+TGG - chr2_2:13034256-13034275 None:intergenic 45.0%
GATCCAACTTCTTCGACAAC+AGG - chr2_2:13034320-13034339 None:intergenic 45.0%
! GGAATGTTACAGGTGTTGTC+GGG + chr2_2:13034408-13034427 Msa0239020:CDS 45.0%
! GAATGTTACAGGTGTTGTCG+GGG + chr2_2:13034409-13034428 Msa0239020:CDS 45.0%
GTCCAGTTTCAGAATAAGGG+AGG - chr2_2:13034442-13034461 None:intergenic 45.0%
ATATAGCACCACCATTGAGG+CGG - chr2_2:13034547-13034566 None:intergenic 45.0%
GGAATATAGCACCACCATTG+AGG - chr2_2:13034550-13034569 None:intergenic 45.0%
ATACTAGTGGTAGCTGGGGT+GGG - chr2_2:13032753-13032772 None:intergenic 50.0%
TGGCATACTAGTGGTAGCTG+GGG - chr2_2:13032757-13032776 None:intergenic 50.0%
!! TGAGATAGTGTTGGTGGTGC+TGG - chr2_2:13032817-13032836 None:intergenic 50.0%
CAAGGGGGATGAGATAGTGT+TGG - chr2_2:13032826-13032845 None:intergenic 50.0%
GTAATGGTAGAGGGAGTGGT+GGG - chr2_2:13032924-13032943 None:intergenic 50.0%
!! GGCAGTGATAATGGGGGTAA+TGG - chr2_2:13032940-13032959 None:intergenic 50.0%
!! TGTGGTGGCAGTGATAATGG+GGG - chr2_2:13032946-13032965 None:intergenic 50.0%
GGTTGTGGTGGCAGTGATAA+TGG - chr2_2:13032949-13032968 None:intergenic 50.0%
CGGGGTGATTATAGTGGTTG+TGG - chr2_2:13032964-13032983 None:intergenic 50.0%
! AGATGTGATAGGGGTAGTGG+TGG - chr2_2:13032988-13033007 None:intergenic 50.0%
GCTCGCAACAGATGTGATAG+GGG - chr2_2:13032997-13033016 None:intergenic 50.0%
GTGCTCGCAACAGATGTGAT+AGG - chr2_2:13032999-13033018 None:intergenic 50.0%
! ATGATTGGGGTAGTGGTGGT+CGG - chr2_2:13033212-13033231 None:intergenic 50.0%
TTTCAAAAGACTCGTGGGCG+TGG + chr2_2:13033631-13033650 Msa0239020:CDS 50.0%
GCAGAGTGTAATCCAGTCTC+TGG - chr2_2:13034143-13034162 None:intergenic 50.0%
ATGGACTTCAACCGCCTCAA+TGG + chr2_2:13034533-13034552 Msa0239020:CDS 50.0%
ATACTAGTGGTAGCTGGGGT+GGG - chr2_2:13032753-13032772 None:intergenic 50.0%
TGGCATACTAGTGGTAGCTG+GGG - chr2_2:13032757-13032776 None:intergenic 50.0%
!! TGAGATAGTGTTGGTGGTGC+TGG - chr2_2:13032817-13032836 None:intergenic 50.0%
CAAGGGGGATGAGATAGTGT+TGG - chr2_2:13032826-13032845 None:intergenic 50.0%
GTAATGGTAGAGGGAGTGGT+GGG - chr2_2:13032924-13032943 None:intergenic 50.0%
!! GGCAGTGATAATGGGGGTAA+TGG - chr2_2:13032940-13032959 None:intergenic 50.0%
!! TGTGGTGGCAGTGATAATGG+GGG - chr2_2:13032946-13032965 None:intergenic 50.0%
GGTTGTGGTGGCAGTGATAA+TGG - chr2_2:13032949-13032968 None:intergenic 50.0%
CGGGGTGATTATAGTGGTTG+TGG - chr2_2:13032964-13032983 None:intergenic 50.0%
! AGATGTGATAGGGGTAGTGG+TGG - chr2_2:13032988-13033007 None:intergenic 50.0%
GCTCGCAACAGATGTGATAG+GGG - chr2_2:13032997-13033016 None:intergenic 50.0%
GTGCTCGCAACAGATGTGAT+AGG - chr2_2:13032999-13033018 None:intergenic 50.0%
! ATGATTGGGGTAGTGGTGGT+CGG - chr2_2:13033212-13033231 None:intergenic 50.0%
TTTCAAAAGACTCGTGGGCG+TGG + chr2_2:13033631-13033650 Msa0239020:CDS 50.0%
GCAGAGTGTAATCCAGTCTC+TGG - chr2_2:13034143-13034162 None:intergenic 50.0%
ATGGACTTCAACCGCCTCAA+TGG + chr2_2:13034533-13034552 Msa0239020:CDS 50.0%
TACTAGTGGTAGCTGGGGTG+GGG - chr2_2:13032752-13032771 None:intergenic 55.0%
CATACTAGTGGTAGCTGGGG+TGG - chr2_2:13032754-13032773 None:intergenic 55.0%
!! GATAGTGTTGGTGGTGCTGG+TGG - chr2_2:13032814-13032833 None:intergenic 55.0%
! GGGGGATGAGATAGTGTTGG+TGG - chr2_2:13032823-13032842 None:intergenic 55.0%
!! GAGTAGTGATGGTGGGAGTG+TGG - chr2_2:13032902-13032921 None:intergenic 55.0%
! GTGGTGGGAGTAGTGATGGT+GGG - chr2_2:13032909-13032928 None:intergenic 55.0%
! AGTGGTGGGAGTAGTGATGG+TGG - chr2_2:13032910-13032929 None:intergenic 55.0%
! GGTAATGGTAGAGGGAGTGG+TGG - chr2_2:13032925-13032944 None:intergenic 55.0%
GGTGGTCGGGGTGATTATAG+TGG - chr2_2:13032970-13032989 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTC+GGG - chr2_2:13032983-13033002 None:intergenic 55.0%
! GTGATAGGGGTAGTGGTGGT+CGG - chr2_2:13032984-13033003 None:intergenic 55.0%
TCGGGGTGATAGCTGATGGA+TGG - chr2_2:13033193-13033212 None:intergenic 55.0%
! TGATTGGGGTAGTGGTGGTC+GGG - chr2_2:13033211-13033230 None:intergenic 55.0%
TCGTGGGCGTGGAGGAAATA+TGG + chr2_2:13033642-13033661 Msa0239020:CDS 55.0%
! AGTCTCTGGTGACTTGCGCT+GGG - chr2_2:13034129-13034148 None:intergenic 55.0%
GACTTCAACCGCCTCAATGG+TGG + chr2_2:13034536-13034555 Msa0239020:CDS 55.0%
TACTAGTGGTAGCTGGGGTG+GGG - chr2_2:13032752-13032771 None:intergenic 55.0%
CATACTAGTGGTAGCTGGGG+TGG - chr2_2:13032754-13032773 None:intergenic 55.0%
!! GATAGTGTTGGTGGTGCTGG+TGG - chr2_2:13032814-13032833 None:intergenic 55.0%
! GGGGGATGAGATAGTGTTGG+TGG - chr2_2:13032823-13032842 None:intergenic 55.0%
!! GAGTAGTGATGGTGGGAGTG+TGG - chr2_2:13032902-13032921 None:intergenic 55.0%
! GTGGTGGGAGTAGTGATGGT+GGG - chr2_2:13032909-13032928 None:intergenic 55.0%
! AGTGGTGGGAGTAGTGATGG+TGG - chr2_2:13032910-13032929 None:intergenic 55.0%
! GGTAATGGTAGAGGGAGTGG+TGG - chr2_2:13032925-13032944 None:intergenic 55.0%
GGTGGTCGGGGTGATTATAG+TGG - chr2_2:13032970-13032989 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTC+GGG - chr2_2:13032983-13033002 None:intergenic 55.0%
! GTGATAGGGGTAGTGGTGGT+CGG - chr2_2:13032984-13033003 None:intergenic 55.0%
TCGGGGTGATAGCTGATGGA+TGG - chr2_2:13033193-13033212 None:intergenic 55.0%
! TGATTGGGGTAGTGGTGGTC+GGG - chr2_2:13033211-13033230 None:intergenic 55.0%
TCGTGGGCGTGGAGGAAATA+TGG + chr2_2:13033642-13033661 Msa0239020:CDS 55.0%
! AGTCTCTGGTGACTTGCGCT+GGG - chr2_2:13034129-13034148 None:intergenic 55.0%
GACTTCAACCGCCTCAATGG+TGG + chr2_2:13034536-13034555 Msa0239020:CDS 55.0%
!! TTGGTGGTGCTGGTGGTGGT+GGG - chr2_2:13032807-13032826 None:intergenic 60.0%
!! AGTGTTGGTGGTGCTGGTGG+TGG - chr2_2:13032811-13032830 None:intergenic 60.0%
!! TGGGGATGGTGGTGGTCAAG+GGG - chr2_2:13032842-13032861 None:intergenic 60.0%
!! GTGGGGATGGTGGTGGTCAA+GGG - chr2_2:13032843-13032862 None:intergenic 60.0%
!! GTTGGTGATGTGGGTGGGGA+TGG - chr2_2:13032856-13032875 None:intergenic 60.0%
! GGGAGTGGTGGGAGTAGTGA+TGG - chr2_2:13032913-13032932 None:intergenic 60.0%
! GGGGGTAATGGTAGAGGGAG+TGG - chr2_2:13032928-13032947 None:intergenic 60.0%
! GATAGGGGTAGTGGTGGTCG+GGG - chr2_2:13032982-13033001 None:intergenic 60.0%
GTGGTCGGGGTGATAGCTGA+TGG - chr2_2:13033197-13033216 None:intergenic 60.0%
! GATTGGGGTAGTGGTGGTCG+GGG - chr2_2:13033210-13033229 None:intergenic 60.0%
CAAAAGACTCGTGGGCGTGG+AGG + chr2_2:13033634-13033653 Msa0239020:CDS 60.0%
! CAGTCTCTGGTGACTTGCGC+TGG - chr2_2:13034130-13034149 None:intergenic 60.0%
CAGCGCAAGTCACCAGAGAC+TGG + chr2_2:13034128-13034147 Msa0239020:CDS 60.0%
! ACCTGGGCATTGCTGCTCTC+CGG - chr2_2:13034239-13034258 None:intergenic 60.0%
!! TTGGTGGTGCTGGTGGTGGT+GGG - chr2_2:13032807-13032826 None:intergenic 60.0%
!! AGTGTTGGTGGTGCTGGTGG+TGG - chr2_2:13032811-13032830 None:intergenic 60.0%
!! TGGGGATGGTGGTGGTCAAG+GGG - chr2_2:13032842-13032861 None:intergenic 60.0%
!! GTGGGGATGGTGGTGGTCAA+GGG - chr2_2:13032843-13032862 None:intergenic 60.0%
!! GTTGGTGATGTGGGTGGGGA+TGG - chr2_2:13032856-13032875 None:intergenic 60.0%
! GGGAGTGGTGGGAGTAGTGA+TGG - chr2_2:13032913-13032932 None:intergenic 60.0%
! GGGGGTAATGGTAGAGGGAG+TGG - chr2_2:13032928-13032947 None:intergenic 60.0%
! GATAGGGGTAGTGGTGGTCG+GGG - chr2_2:13032982-13033001 None:intergenic 60.0%
GTGGTCGGGGTGATAGCTGA+TGG - chr2_2:13033197-13033216 None:intergenic 60.0%
! GATTGGGGTAGTGGTGGTCG+GGG - chr2_2:13033210-13033229 None:intergenic 60.0%
CAAAAGACTCGTGGGCGTGG+AGG + chr2_2:13033634-13033653 Msa0239020:CDS 60.0%
! CAGTCTCTGGTGACTTGCGC+TGG - chr2_2:13034130-13034149 None:intergenic 60.0%
CAGCGCAAGTCACCAGAGAC+TGG + chr2_2:13034128-13034147 Msa0239020:CDS 60.0%
! ACCTGGGCATTGCTGCTCTC+CGG - chr2_2:13034239-13034258 None:intergenic 60.0%
GTGGTAGCTGGGGTGGGGAT+GGG - chr2_2:13032747-13032766 None:intergenic 65.0%
AGTGGTAGCTGGGGTGGGGA+TGG - chr2_2:13032748-13032767 None:intergenic 65.0%
GGTGGGGGAAGATGTGGTGG+TGG - chr2_2:13032790-13032809 None:intergenic 65.0%
!! GGTGGTGGGGGAAGATGTGG+TGG - chr2_2:13032793-13032812 None:intergenic 65.0%
!! GGTGGTGGTGGGGGAAGATG+TGG - chr2_2:13032796-13032815 None:intergenic 65.0%
!! TGGTGGTGCTGGTGGTGGTG+GGG - chr2_2:13032806-13032825 None:intergenic 65.0%
!! GTTGGTGGTGCTGGTGGTGG+TGG - chr2_2:13032808-13032827 None:intergenic 65.0%
!! GGGGATGGTGGTGGTCAAGG+GGG - chr2_2:13032841-13032860 None:intergenic 65.0%
!! GGTGGGGATGGTGGTGGTCA+AGG - chr2_2:13032844-13032863 None:intergenic 65.0%
! GATGTGGGTGGGGATGGTGG+TGG - chr2_2:13032850-13032869 None:intergenic 65.0%
GGTGATGTGGGTGGGGATGG+TGG - chr2_2:13032853-13032872 None:intergenic 65.0%
! CTCTGGTGACTTGCGCTGGG+AGG - chr2_2:13034126-13034145 None:intergenic 65.0%
TCCGGAGAGCAGCAATGCCC+AGG + chr2_2:13034235-13034254 Msa0239020:CDS 65.0%
GTGGTAGCTGGGGTGGGGAT+GGG - chr2_2:13032747-13032766 None:intergenic 65.0%
AGTGGTAGCTGGGGTGGGGA+TGG - chr2_2:13032748-13032767 None:intergenic 65.0%
GGTGGGGGAAGATGTGGTGG+TGG - chr2_2:13032790-13032809 None:intergenic 65.0%
!! GGTGGTGGGGGAAGATGTGG+TGG - chr2_2:13032793-13032812 None:intergenic 65.0%
!! GGTGGTGGTGGGGGAAGATG+TGG - chr2_2:13032796-13032815 None:intergenic 65.0%
!! TGGTGGTGCTGGTGGTGGTG+GGG - chr2_2:13032806-13032825 None:intergenic 65.0%
!! GTTGGTGGTGCTGGTGGTGG+TGG - chr2_2:13032808-13032827 None:intergenic 65.0%
!! GGGGATGGTGGTGGTCAAGG+GGG - chr2_2:13032841-13032860 None:intergenic 65.0%
!! GGTGGGGATGGTGGTGGTCA+AGG - chr2_2:13032844-13032863 None:intergenic 65.0%
! GATGTGGGTGGGGATGGTGG+TGG - chr2_2:13032850-13032869 None:intergenic 65.0%
GGTGATGTGGGTGGGGATGG+TGG - chr2_2:13032853-13032872 None:intergenic 65.0%
! CTCTGGTGACTTGCGCTGGG+AGG - chr2_2:13034126-13034145 None:intergenic 65.0%
TCCGGAGAGCAGCAATGCCC+AGG + chr2_2:13034235-13034254 Msa0239020:CDS 65.0%
!! GGTGGTGCTGGTGGTGGTGG+GGG - chr2_2:13032805-13032824 None:intergenic 70.0%
!! GGTGGTGCTGGTGGTGGTGG+GGG - chr2_2:13032805-13032824 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 13032588 13034574 13032588 ID=Msa0239020;Name=Msa0239020
chr2_2 mRNA 13032588 13034574 13032588 ID=Msa0239020-mRNA-1;Parent=Msa0239020;Name=Msa0239020-mRNA-1;_AED=0.01;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|527
chr2_2 exon 13032588 13033453 13032588 ID=Msa0239020-mRNA-1:exon:5512;Parent=Msa0239020-mRNA-1
chr2_2 exon 13033581 13033697 13033581 ID=Msa0239020-mRNA-1:exon:5513;Parent=Msa0239020-mRNA-1
chr2_2 exon 13033974 13034574 13033974 ID=Msa0239020-mRNA-1:exon:5514;Parent=Msa0239020-mRNA-1
chr2_2 CDS 13032588 13033453 13032588 ID=Msa0239020-mRNA-1:cds;Parent=Msa0239020-mRNA-1
chr2_2 CDS 13033581 13033697 13033581 ID=Msa0239020-mRNA-1:cds;Parent=Msa0239020-mRNA-1
chr2_2 CDS 13033974 13034574 13033974 ID=Msa0239020-mRNA-1:cds;Parent=Msa0239020-mRNA-1
Gene Sequence

>Msa0239020

ATGAGATTTTCTACCAATAACATCACAATCCCTCAAAGTGTCACACCATTTTGCTCTGATAATCTTACTTTTAACCAAGAAAATAGTCCAGTCTCTTTTGCCCCACTTAAACCAAATGACTTCATAGATCTAGATAAATTGATGATCAATTTCAATCCCATCCCCACCCCAGCTACCACTAGTATGCCAAAATTCAATACCACCACCACATCTTCCCCCACCACCACCAGCACCACCAACACTATCTCATCCCCCTTGACCACCACCATCCCCACCCACATCACCAACATTAACACCAGTGTTCATGTTATCCACACTCCCACCATCACTACTCCCACCACTCCCTCTACCATTACCCCCATTATCACTGCCACCACAACCACTATAATCACCCCGACCACCACTACCCCTATCACATCTGTTGCGAGCACTACCATGACAAACACTAGTGTTCATGAAACCAATCAATATCCCACCAATTATAATTTTCGAATACTTGCTGGACAACAACAGATTCAACAAAACATCAACAATCAAGTGTCTGTTCCCAAACCTGTTGCATGCATTGATATCACACCCACTCATTTTGAATGTGCATACAACCATCCATCAGCTATCACCCCGACCACCACTACCCCAATCATATCTGCTACGAGCACTGCCATGACAAAGACTAGTGTTCATGAAACCAATCAATATCTCACCAAATATAATTTTCCAATACTCGCTGGACAACAACAGATTCAACAAAACATCAACAATCAAGCGTCTGTTCCCAAACCTGTTGCATGCATTGATATCACAACCGCTCATTTTGAACGTGCATACAACCATCCATCAGTTGCACTATGCAGATCGAGAAAAAGAAAACATAATAACCAAATGGCATTGATGTGTTATATGAGGGAGGATGAGCTTTCAAAAGACTCGTGGGCGTGGAGGAAATATGGACAAAAAGCTATTAAAGGGTCTCCACATCCAAGGAGCTATTACAAATGTAGCACTTGGTCTGATTGTCCAGCAAGAAGAAAGGTTGAAAAATGCAAAACTCAAGAGAACACTTATATTGTGACATATGAAGGAGAGCACAATCATGCAAAGCCAACATTTAATAAGAATGTTGTTGTTGGTACCTCCCAGCGCAAGTCACCAGAGACTGGATTACACTCTGCAGAAGAAGCTGGATCATCTACAAACATCACAAATTTAGGTTCGCCTAATATGGTGATGTTACAGATTGATCATCCGGAGAGCAGCAATGCCCAGGTTCTCGCTGATCAATCAAAAATCCTTTATCCGGAAATGGAACTATTAGAGAGTCAATTACCTGTTGTCGAAGAAGTTGGATCATCCTCAAATTTTAGAAACTTGGGTTCACATAACAAAATGATTATGCAATTTGATGAACCACAAAGTAGGAATGTTACAGGTGTTGTCGGGGACTCAAACCTCCCTTATTCTGAAACTGGACTCATTGGAAGCTTTGATGATAATGATGACATTTTGATACCAAACATAACAGCTTGGTCAGAAGATTATTTAATGGACTTCAACCGCCTCAATGGTGGTGCTATATTCCCTTAG
Protein sequence

>Msa0239020

MRFSTNNITIPQSVTPFCSDNLTFNQENSPVSFAPLKPNDFIDLDKLMINFNPIPTPATTSMPKFNTTTTSSPTTTSTTNTISSPLTTTIPTHITNINTSVHVIHTPTITTPTTPSTITPIITATTTTIITPTTTTPITSVASTTMTNTSVHETNQYPTNYNFRILAGQQQIQQNINNQVSVPKPVACIDITPTHFECAYNHPSAITPTTTTPIISATSTAMTKTSVHETNQYLTKYNFPILAGQQQIQQNINNQASVPKPVACIDITTAHFERAYNHPSVALCRSRKRKHNNQMALMCYMREDELSKDSWAWRKYGQKAIKGSPHPRSYYKCSTWSDCPARRKVEKCKTQENTYIVTYEGEHNHAKPTFNKNVVVGTSQRKSPETGLHSAEEAGSSTNITNLGSPNMVMLQIDHPESSNAQVLADQSKILYPEMELLESQLPVVEEVGSSSNFRNLGSHNKMIMQFDEPQSRNVTGVVGDSNLPYSETGLIGSFDDNDDILIPNITAWSEDYLMDFNRLNGGAIFP*