AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241320 MtrunA17_Chr2g0292761 50.547 548 214 9 131 628 2 542 2.50e-174 506
Msa0241320 MtrunA17_Chr6g0481041 32.068 711 367 19 1 626 44 723 2.11e-109 345
Msa0241320 MtrunA17_Chr2g0292731 36.832 505 250 11 192 628 47 550 3.03e-90 290
Msa0241320 MtrunA17_Chr4g0024351 31.662 698 362 21 1 626 75 729 4.38e-90 295
Msa0241320 MtrunA17_Chr2g0292741 36.581 503 249 14 192 628 39 537 2.05e-86 280
Msa0241320 MtrunA17_Chr7g0246631 31.230 634 316 20 99 622 139 762 4.31e-80 269
Msa0241320 MtrunA17_Chr7g0246631 39.623 106 58 3 4 107 109 210 1.61e-14 77.0
Msa0241320 MtrunA17_Chr8g0350321 31.612 639 315 18 99 622 163 794 8.85e-80 269
Msa0241320 MtrunA17_Chr8g0350321 38.679 106 59 3 4 107 133 234 3.87e-14 75.9
Msa0241320 MtrunA17_Chr5g0410711 30.551 635 346 18 1 574 104 704 1.58e-78 265
Msa0241320 MtrunA17_Chr2g0322731 30.658 623 332 15 99 626 148 765 1.14e-77 262
Msa0241320 MtrunA17_Chr2g0322731 42.202 109 57 3 1 107 115 219 3.27e-18 89.0
Msa0241320 MtrunA17_Chr2g0331581 28.409 704 358 25 1 626 154 789 1.21e-72 249
Msa0241320 MtrunA17_Chr6g0472471 28.638 646 367 18 1 581 84 700 1.01e-71 246
Msa0241320 MtrunA17_Chr5g0394111 30.016 623 327 16 84 627 55 647 4.22e-68 234
Msa0241320 MtrunA17_Chr5g0394111 38.333 120 57 4 1 112 48 158 9.06e-14 74.7
Msa0241320 MtrunA17_Chr7g0224451 38.764 356 186 9 96 436 61 399 7.45e-68 228
Msa0241320 MtrunA17_Chr7g0224451 37.209 129 64 3 1 127 31 144 2.62e-18 88.2
Msa0241320 MtrunA17_Chr1g0203671 26.859 659 355 17 91 626 135 789 4.16e-64 226
Msa0241320 MtrunA17_Chr1g0203671 43.396 106 54 3 4 107 113 214 3.38e-17 85.9
Msa0241320 MtrunA17_Chr7g0224481 38.225 293 149 9 99 376 64 339 7.29e-51 179
Msa0241320 MtrunA17_Chr7g0224481 37.209 129 64 3 1 127 31 144 1.22e-18 87.8
Msa0241320 MtrunA17_Chr2g0304191 46.970 132 65 1 218 344 2 133 1.63e-29 113
Msa0241320 MtrunA17_Chr7g0224491 29.801 302 145 10 381 626 3 293 1.70e-22 98.2
Msa0241320 MtrunA17_Chr2g0319671 33.505 194 112 5 259 444 105 289 4.98e-22 97.4
Msa0241320 MtrunA17_Chr2g0292771 42.742 124 66 3 510 628 2 125 4.16e-21 89.7
Msa0241320 MtrunA17_Chr5g0419821 39.048 105 62 1 4 108 52 154 3.89e-14 70.9
Msa0241320 MtrunA17_Chr7g0224431 39.130 92 51 2 232 318 1 92 7.41e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241320 AT1G73360.1 32.328 696 364 15 5 626 51 713 2.87e-107 340
Msa0241320 AT1G17920.2 31.268 678 374 15 5 626 40 681 4.07e-99 317
Msa0241320 AT1G17920.1 31.268 678 374 15 5 626 40 681 4.07e-99 317
Msa0241320 AT3G03260.1 30.202 692 374 18 5 626 42 694 1.63e-91 298
Msa0241320 AT3G61150.1 31.384 701 362 22 4 622 128 791 4.48e-89 294
Msa0241320 AT4G21750.2 29.562 707 385 15 4 626 80 757 9.24e-85 281
Msa0241320 AT4G21750.1 29.562 707 385 15 4 626 80 757 9.24e-85 281
Msa0241320 AT4G21750.3 29.562 707 385 15 4 626 80 757 9.24e-85 281
Msa0241320 AT4G21750.4 29.562 707 385 15 4 626 80 757 9.24e-85 281
Msa0241320 AT4G04890.2 30.422 664 359 17 4 601 80 706 1.88e-84 280
Msa0241320 AT4G04890.1 30.422 664 359 17 4 601 80 706 1.88e-84 280
Msa0241320 AT1G05230.3 30.312 673 369 17 1 622 79 702 2.69e-82 274
Msa0241320 AT1G05230.8 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.4 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.9 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.10 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.7 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.11 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.2 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.6 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.5 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT1G05230.1 30.267 674 370 17 1 622 79 704 1.19e-81 272
Msa0241320 AT5G17320.1 30.168 653 326 20 96 626 71 715 9.44e-75 254
Msa0241320 AT4G00730.1 30.128 624 333 15 99 626 182 798 1.77e-74 254
Msa0241320 AT4G00730.1 39.623 106 58 3 4 107 152 253 2.36e-14 77.0
Msa0241320 AT3G03260.2 35.185 432 235 11 1 425 38 431 5.13e-74 247
Msa0241320 AT2G32370.1 28.198 688 378 19 1 624 83 718 1.91e-72 248
Msa0241320 AT1G34650.1 30.806 620 305 17 99 602 64 675 4.04e-72 246
Msa0241320 AT1G05230.12 30.335 567 302 14 1 518 79 601 9.86e-69 235
Msa0241320 AT1G79840.3 27.778 702 356 23 1 626 58 684 1.46e-62 220
Msa0241320 AT1G79840.6 27.778 702 356 23 1 626 58 684 1.46e-62 220
Msa0241320 AT5G46880.3 28.169 710 401 22 1 628 126 808 2.20e-62 222
Msa0241320 AT5G46880.1 28.169 710 401 22 1 628 126 808 2.20e-62 222
Msa0241320 AT5G46880.2 28.169 710 401 22 1 628 126 808 2.20e-62 222
Msa0241320 AT1G79840.1 27.778 702 356 23 1 626 116 742 4.69e-62 219
Msa0241320 AT1G79840.2 27.778 702 356 23 1 626 145 771 6.60e-62 219
Msa0241320 AT5G52170.3 28.235 595 339 15 99 626 105 678 2.09e-60 214
Msa0241320 AT5G52170.3 40.566 106 57 3 4 107 75 176 1.32e-15 80.9
Msa0241320 AT5G52170.1 28.235 595 339 15 99 626 105 678 2.09e-60 214
Msa0241320 AT5G52170.1 40.566 106 57 3 4 107 75 176 1.32e-15 80.9
Msa0241320 AT4G17710.1 28.934 591 338 19 99 628 136 705 8.13e-59 210
Msa0241320 AT4G17710.1 30.526 190 102 7 1 174 103 278 9.99e-12 68.6
Msa0241320 AT5G52170.2 28.167 600 338 18 99 626 105 683 2.62e-58 208
Msa0241320 AT5G52170.2 40.566 106 57 3 4 107 75 176 1.34e-15 80.9
Msa0241320 AT1G79840.4 28.125 576 283 18 1 516 116 620 6.23e-55 197
Msa0241320 AT4G00730.2 33.333 363 201 9 99 425 182 539 3.09e-53 192
Msa0241320 AT4G00730.2 39.623 106 58 3 4 107 152 253 3.49e-14 76.3
Msa0241320 AT4G25530.1 25.778 675 387 17 10 626 64 682 9.26e-52 190
Msa0241320 AT1G79840.5 29.519 437 224 13 1 424 116 481 1.58e-48 177
Msa0241320 AT5G07260.2 25.094 534 314 17 141 626 37 532 3.51e-24 107
Msa0241320 AT5G07260.1 24.861 539 314 17 141 626 37 537 3.62e-23 104
Msa0241320 AT4G26920.1 27.811 169 110 5 219 383 74 234 2.17e-13 73.2

Find 103 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGAAGGTTTACCATTAA+TGG 0.136704 2_2:-16799624 None:intergenic
AACCAAAACTTCACTTGATT+TGG 0.218865 2_2:-16792544 None:intergenic
CAATTATATTTCAATTATTC+AGG 0.219672 2_2:+16798859 Msa0241320:CDS
TGAATTATCACCGCACCTTT+TGG 0.226505 2_2:-16799530 None:intergenic
TTAAAATCCGGTATATTTAA+AGG 0.243162 2_2:-16799596 None:intergenic
TCCACTTGGATGTTTCCTTC+TGG 0.250199 2_2:+16796643 Msa0241320:CDS
CCTGATGTTGTTGATGGTTT+TGG 0.260108 2_2:-16799804 None:intergenic
TCTTCATGATTCTTACAATA+TGG 0.264773 2_2:-16793790 None:intergenic
TAAGAACCAATGATCCCTTA+TGG 0.268122 2_2:+16795278 Msa0241320:CDS
TGGAGCAGAAAGATTGCTTT+TGG 0.273244 2_2:+16797300 Msa0241320:CDS
ACATCCAAATTCACTCCTTC+TGG 0.276992 2_2:-16799761 None:intergenic
AATTTCTAATGAATATTCTA+AGG 0.277550 2_2:+16796681 Msa0241320:CDS
AATATTCATTAGAAATTTGA+TGG 0.280982 2_2:-16796675 None:intergenic
ATCCAAATCAAGTGAAGTTT+TGG 0.286140 2_2:+16792542 Msa0241320:CDS
TGTTTCGGATGAAAATATTT+TGG 0.290522 2_2:+16795168 Msa0241320:CDS
TCTTCAATTCCTCTTTCATT+TGG 0.310977 2_2:-16792807 None:intergenic
TCTTCAATTCCTCTTTCATT+TGG 0.310977 2_2:-16793747 None:intergenic
AGAAGATTCAACTCTTGTTT+TGG 0.315969 2_2:-16795386 None:intergenic
TAGTCCAGAAGGAGTGAATT+TGG 0.335626 2_2:+16799757 Msa0241320:CDS
GTCGATCACACAATTGCATT+TGG 0.340096 2_2:+16797280 Msa0241320:CDS
TCACATCTTTGCTTGTCGTT+TGG 0.348151 2_2:-16792496 None:intergenic
CTCTATACAGACAGTGTGTT+TGG 0.351748 2_2:-16797252 None:intergenic
AGATCCTGCAGGACGTATTC+AGG 0.356366 2_2:+16798225 Msa0241320:CDS
GGAGAAAATTCCTGTTGTTT+CGG 0.362562 2_2:+16795153 Msa0241320:CDS
AAAATTTATTGCTACACATA+TGG 0.374508 2_2:+16795132 Msa0241320:CDS
CCGTTGAAATGATCAATAAT+AGG 0.379183 2_2:-16795361 None:intergenic
GGTTCTTCAGAAAATCAAAA+TGG 0.382926 2_2:+16796361 Msa0241320:CDS
AAGAACCAATGATCCCTTAT+GGG 0.382977 2_2:+16795279 Msa0241320:CDS
ACAATGTCACTTCTTTCATC+TGG 0.389220 2_2:+16799647 Msa0241320:CDS
CTTAACCCATAAGGGATCAT+TGG 0.393215 2_2:-16795284 None:intergenic
AGAATCCCTGATGTTGTTGA+TGG 0.401806 2_2:-16799810 None:intergenic
AGAATGCTTCATAGATCCTC+TGG 0.408780 2_2:+16799553 Msa0241320:CDS
GTGATATAGCCACGGAGCTT+GGG 0.423366 2_2:+16792515 Msa0241320:CDS
AACATGCAGAAGAACAGAAA+TGG 0.430765 2_2:+16795198 Msa0241320:CDS
TAGATTTAAAGCAAGCCATT+TGG 0.434363 2_2:+16795426 Msa0241320:CDS
CCAAAACCATCAACAACATC+AGG 0.441289 2_2:+16799804 Msa0241320:CDS
ATAAAAGTGCCATTGTTGTT+TGG 0.449365 2_2:-16798145 None:intergenic
CTTGTTCACAATAGCGTAGA+AGG 0.453227 2_2:-16796552 None:intergenic
GAGATTGCACACATTTCAAC+TGG 0.456031 2_2:+16798824 Msa0241320:CDS
ATTTCTGTTCTTCTGCATGT+TGG 0.465349 2_2:-16795196 None:intergenic
AACAAGTTGAAGCTGGTACT+TGG 0.466646 2_2:+16796569 Msa0241320:CDS
GAAACATCCAAGTGGAAGAA+TGG 0.468632 2_2:-16796636 None:intergenic
TCTTCATCAGAAAATTTATG+AGG 0.468658 2_2:+16795330 Msa0241320:intron
AATTCTCGAGATGGTACAAA+AGG 0.474312 2_2:-16796526 None:intergenic
TGTGATATAGCCACGGAGCT+TGG 0.475429 2_2:+16792514 Msa0241320:CDS
AGTTGCAATTTCTGCTAAAG+AGG 0.476885 2_2:+16795240 Msa0241320:CDS
ACAATTGAAGTGCTTGAAGA+AGG 0.478953 2_2:+16796340 Msa0241320:CDS
CACTTCGCGCGGAGAATGAA+AGG 0.480846 2_2:+16793707 Msa0241320:CDS
AATGTGAGACTTAACCCATA+AGG 0.489274 2_2:-16795293 None:intergenic
ATGTGAGACTTAACCCATAA+GGG 0.491613 2_2:-16795292 None:intergenic
AAACAAAAGGAGTCAACAAA+AGG 0.492314 2_2:+16792570 Msa0241320:CDS
CTAAAAGCAACTTAACCAAA+TGG 0.494670 2_2:-16795441 None:intergenic
TAACATCAGCTATGGATTGT+GGG 0.496344 2_2:-16798072 None:intergenic
AGAAGTGACATTGTTGATGA+AGG 0.500012 2_2:-16799638 None:intergenic
CCCAACTATTGTTACAAAAG+CGG 0.502689 2_2:+16796315 Msa0241320:CDS
CACTTCGAGCGGAGAATGAA+AGG 0.507621 2_2:+16792767 Msa0241320:CDS
CAAGAACAACCAAATGAAAG+AGG 0.509196 2_2:+16793738 Msa0241320:CDS
ATCATATGATTACTCAAAAG+AGG 0.511798 2_2:+16796606 Msa0241320:CDS
ACGATAGTCAATCTCATTCG+AGG 0.514712 2_2:+16799684 Msa0241320:CDS
CCTATTATTGATCATTTCAA+CGG 0.522352 2_2:+16795361 Msa0241320:CDS
TTAATGGAATCCTTAAAATC+CGG 0.522496 2_2:-16799608 None:intergenic
GCTATCATTAACATCAGCTA+TGG 0.529012 2_2:-16798080 None:intergenic
TTCATTCTCCGCTCGAAGTG+CGG 0.534827 2_2:-16792764 None:intergenic
TTAACATCAGCTATGGATTG+TGG 0.536288 2_2:-16798073 None:intergenic
CGAATGAGATTGACTATCGT+TGG 0.536682 2_2:-16799681 None:intergenic
AAGTCAAACAGCATCTGAGA+TGG 0.540298 2_2:-16798196 None:intergenic
TGAGAACAACCAAATGAAAG+AGG 0.542081 2_2:+16792798 Msa0241320:CDS
AACAAGCTCCGCACTTCGAG+CGG 0.542911 2_2:+16792756 Msa0241320:CDS
TAGTGGGATGATAATTATCA+AGG 0.543064 2_2:+16798788 Msa0241320:intron
ATGGACTCCATTCTTCCACT+TGG 0.544255 2_2:+16796629 Msa0241320:CDS
TTCAAGTTGAAGTTGTTGCA+TGG 0.545091 2_2:-16792884 None:intergenic
TTCAAGTTGAAGTTGTTGCA+TGG 0.545091 2_2:-16793824 None:intergenic
GGAACCTGAATACGTCCTGC+AGG 0.552134 2_2:-16798229 None:intergenic
CTATCGATGTCTAGTCCAGA+AGG 0.560750 2_2:+16799746 Msa0241320:CDS
GACTTCTTAAGAGATCCTGC+AGG 0.565690 2_2:+16798214 Msa0241320:CDS
AGTCAAACAGCATCTGAGAT+GGG 0.566724 2_2:-16798195 None:intergenic
TAAAGGAGAAAACACAACAT+AGG 0.568052 2_2:-16799579 None:intergenic
TATGATTACTCAAAAGAGGA+TGG 0.568227 2_2:+16796610 Msa0241320:CDS
AACTAGCTCTGCACTTCGCG+CGG 0.583586 2_2:+16793696 Msa0241320:CDS
GGTTTCATGGGTTGAACATG+TGG 0.586718 2_2:+16797213 Msa0241320:intron
ACAAGTTGAAGCTGGTACTT+GGG 0.588116 2_2:+16796570 Msa0241320:CDS
AGAAGGTAAAATTCTCGAGA+TGG 0.590134 2_2:-16796535 None:intergenic
ATGTGTGCAATCTCATGCAT+TGG 0.597886 2_2:-16798815 None:intergenic
TATAGCCACGGAGCTTGGGA+TGG 0.601253 2_2:+16792519 Msa0241320:CDS
AAATGCTCGTCTCAAAGAAG+AGG 0.602513 2_2:+16793846 Msa0241320:CDS
GAATGCTTCATAGATCCTCT+GGG 0.604427 2_2:+16799554 Msa0241320:CDS
TGATGGATCAAGCATCCAGA+AGG 0.609676 2_2:-16796658 None:intergenic
TATTGTGAACAAGTTGAAGC+TGG 0.610611 2_2:+16796562 Msa0241320:CDS
AAGAAGTTCTTTGTTGACCG+TGG 0.617944 2_2:+16799715 Msa0241320:CDS
AACAGCATCTGAGATGGGAA+AGG 0.626469 2_2:-16798190 None:intergenic
CTCTTTCAACCAAACAACAA+TGG 0.632185 2_2:+16798136 Msa0241320:CDS
CATCGATAGTTGAAAAGCCA+CGG 0.634954 2_2:-16799732 None:intergenic
TGAAAATGCTCGTCTCAAAG+AGG 0.637885 2_2:+16792903 Msa0241320:CDS
AAGAATAAGATATCATGCAG+TGG 0.648893 2_2:+16792826 Msa0241320:CDS
AAGAATAAGATATCATGCAG+TGG 0.648893 2_2:+16793766 Msa0241320:CDS
GCAAAGATGTGATATAGCCA+CGG 0.659016 2_2:+16792507 Msa0241320:CDS
CAAAACCATCAACAACATCA+GGG 0.661282 2_2:+16799805 Msa0241320:CDS
AAATGCTCGTCTCAAAGAGG+AGG 0.665650 2_2:+16792906 Msa0241320:CDS
ATTGCACACATTTCAACTGG+TGG 0.679678 2_2:+16798827 Msa0241320:CDS
TCCAGAAGGAAACATCCAAG+TGG 0.683818 2_2:-16796644 None:intergenic
TGGATCCATCCCAAGCTCCG+TGG 0.704130 2_2:-16792524 None:intergenic
AACACAACATAGGATCCCAG+AGG 0.760672 2_2:-16799569 None:intergenic
TGGGAAAGGAAGCAACACTG+AGG 0.770808 2_2:-16798176 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATTAATTTATATTACT+TGG - chr2_2:16792663-16792682 None:intergenic 10.0%
!!! AATATAAATATTTTTCTTGT+AGG + chr2_2:16797192-16797211 Msa0241320:intron 10.0%
!!! TTAGTTTATTTAAAATTTAG+AGG + chr2_2:16798269-16798288 Msa0241320:intron 10.0%
!!! TAATTGCTAAAATATTTTTA+AGG - chr2_2:16798902-16798921 None:intergenic 10.0%
!! TAAATATTTGACTAAATACA+CGG - chr2_2:16791921-16791940 None:intergenic 15.0%
!! TCAATTCTTGTAAAAAAAAA+AGG + chr2_2:16791998-16792017 Msa0241320:intron 15.0%
!! TCAAAATCATCATTAAAAAA+GGG - chr2_2:16792247-16792266 None:intergenic 15.0%
!! TTCAAAATCATCATTAAAAA+AGG - chr2_2:16792248-16792267 None:intergenic 15.0%
!!! AATAATATGTGTAATTTGTT+AGG + chr2_2:16792944-16792963 Msa0241320:intron 15.0%
!! AACCATCAATATATAAATAT+TGG + chr2_2:16794725-16794744 Msa0241320:intron 15.0%
!! ATCCAATATTTATATATTGA+TGG - chr2_2:16794730-16794749 None:intergenic 15.0%
!!! TAATTTTCATCTATCAATAT+AGG + chr2_2:16796273-16796292 Msa0241320:intron 15.0%
!! AATATTCATTAGAAATTTGA+TGG - chr2_2:16796678-16796697 None:intergenic 15.0%
!! AATTTCTAATGAATATTCTA+AGG + chr2_2:16796681-16796700 Msa0241320:CDS 15.0%
!! AAATTAGTTATCAAAATTAG+AGG + chr2_2:16796814-16796833 Msa0241320:intron 15.0%
!! AATTAGTTATCAAAATTAGA+GGG + chr2_2:16796815-16796834 Msa0241320:intron 15.0%
!!! AATATTTTTTTTGTAGATGT+GGG + chr2_2:16797082-16797101 Msa0241320:intron 15.0%
!!! CACTAAATTAACATATTTTT+TGG + chr2_2:16797417-16797436 Msa0241320:intron 15.0%
!! AACATATATTGAAATTGATT+TGG - chr2_2:16797596-16797615 None:intergenic 15.0%
!! AAATCAATTTCAATATATGT+TGG + chr2_2:16797595-16797614 Msa0241320:intron 15.0%
!! TAAAGAGAATAAATTATTTC+TGG - chr2_2:16797745-16797764 None:intergenic 15.0%
!! AAATTAACTCACAATTAATA+AGG - chr2_2:16797931-16797950 None:intergenic 15.0%
!!! ATTTGATTTAGTTTTAGATT+AGG + chr2_2:16798535-16798554 Msa0241320:intron 15.0%
!!! ATCACTTTTAAAACTTTTAT+CGG - chr2_2:16798635-16798654 None:intergenic 15.0%
!! CAATTATATTTCAATTATTC+AGG + chr2_2:16798859-16798878 Msa0241320:CDS 15.0%
!!! ATATTTTTAAGGAAGAAAAA+TGG - chr2_2:16798891-16798910 None:intergenic 15.0%
!! TTATGATAATAAAAACATCA+AGG + chr2_2:16798974-16798993 Msa0241320:intron 15.0%
!! ATCTCTCAAAAAATATAAGA+GGG - chr2_2:16792196-16792215 None:intergenic 20.0%
!! AATCTCTCAAAAAATATAAG+AGG - chr2_2:16792197-16792216 None:intergenic 20.0%
!! CAAAATCATCATTAAAAAAG+GGG - chr2_2:16792246-16792265 None:intergenic 20.0%
!!! AATATTCTTTATTTCAGAAG+GGG - chr2_2:16792460-16792479 None:intergenic 20.0%
!!! GAATATTCTTTATTTCAGAA+GGG - chr2_2:16792461-16792480 None:intergenic 20.0%
!!! TGAATATTCTTTATTTCAGA+AGG - chr2_2:16792462-16792481 None:intergenic 20.0%
!!! CATTAAAAGTTGATTTTGTA+GGG - chr2_2:16793010-16793029 None:intergenic 20.0%
!!! ACATTAAAAGTTGATTTTGT+AGG - chr2_2:16793011-16793030 None:intergenic 20.0%
!!! ACATTAAAAATTGGTTTTGT+AGG - chr2_2:16793951-16793970 None:intergenic 20.0%
!!! TGTTGAATGATAAGTATTTT+AGG + chr2_2:16794190-16794209 Msa0241320:intron 20.0%
!!! GTTGAATGATAAGTATTTTA+GGG + chr2_2:16794191-16794210 Msa0241320:intron 20.0%
!! AGTATTTATAGAGTATGTTT+AGG + chr2_2:16794250-16794269 Msa0241320:intron 20.0%
!! GTATTTATAGAGTATGTTTA+GGG + chr2_2:16794251-16794270 Msa0241320:intron 20.0%
!! TAAATATTGGATAGAAATTG+TGG + chr2_2:16794682-16794701 Msa0241320:intron 20.0%
!! CAAAATCTTAAAACATTATG+TGG - chr2_2:16794769-16794788 None:intergenic 20.0%
!! TATATTTGCATAGTATTTCT+TGG - chr2_2:16794825-16794844 None:intergenic 20.0%
!! AAGAAATACTATGCAAATAT+AGG + chr2_2:16794824-16794843 Msa0241320:intron 20.0%
!! AAAATTTATTGCTACACATA+TGG + chr2_2:16795132-16795151 Msa0241320:CDS 20.0%
!! TAAATTATTGACCATACAAA+GGG - chr2_2:16795525-16795544 None:intergenic 20.0%
!! TTAAATTATTGACCATACAA+AGG - chr2_2:16795526-16795545 None:intergenic 20.0%
!! TTTGTATGGTCAATAATTTA+AGG + chr2_2:16795525-16795544 Msa0241320:intron 20.0%
!! TTGTATGGTCAATAATTTAA+GGG + chr2_2:16795526-16795545 Msa0241320:intron 20.0%
!!! TGACTCAAAATTTTCTTTTT+TGG - chr2_2:16795601-16795620 None:intergenic 20.0%
!! ACAATGGCTATTTAAATTAT+GGG - chr2_2:16795730-16795749 None:intergenic 20.0%
!!! AGCTAAATTTGCTTATATTT+AGG - chr2_2:16796091-16796110 None:intergenic 20.0%
!!! ATAAGCAAATTTGACTTTTT+AGG - chr2_2:16796184-16796203 None:intergenic 20.0%
!!! AGTCAAATTTGCTTATATTT+AGG + chr2_2:16796188-16796207 Msa0241320:intron 20.0%
!! ATCTATCAATATAGGAAAAA+TGG + chr2_2:16796281-16796300 Msa0241320:intron 20.0%
!! AGTTATTATAAAAAGAGCTA+GGG - chr2_2:16796420-16796439 None:intergenic 20.0%
!! AAGTTATTATAAAAAGAGCT+AGG - chr2_2:16796421-16796440 None:intergenic 20.0%
!!! TGATTTTGATTTTTGCTAAA+TGG + chr2_2:16796459-16796478 Msa0241320:intron 20.0%
!!! CAATATTTTTTTTGTAGATG+TGG + chr2_2:16797081-16797100 Msa0241320:intron 20.0%
!!! AATAGATATGTTTTTTAGTC+TGG - chr2_2:16797353-16797372 None:intergenic 20.0%
!! AACATATCTATTTATGATAG+CGG + chr2_2:16797361-16797380 Msa0241320:intron 20.0%
!! CTTAAATGTCTCTTATAAAT+AGG - chr2_2:16797638-16797657 None:intergenic 20.0%
!! ATCATTGATCAAAATTTATG+TGG - chr2_2:16797852-16797871 None:intergenic 20.0%
!!! TTATTCTATTCATTTTTCAG+TGG + chr2_2:16797952-16797971 Msa0241320:intron 20.0%
!!! TTAAAATACTGTTTAGCTTT+AGG - chr2_2:16798404-16798423 None:intergenic 20.0%
!!! GACTTTTAAGTTTTAACATT+TGG - chr2_2:16798952-16798971 None:intergenic 20.0%
!! GCATATATATGTTGAATATA+GGG - chr2_2:16799278-16799297 None:intergenic 20.0%
!! ATATTATGATTGTCAAGATT+GGG - chr2_2:16799381-16799400 None:intergenic 20.0%
!! TTAAAATCCGGTATATTTAA+AGG - chr2_2:16799599-16799618 None:intergenic 20.0%
!!! TTTAAATATACCGGATTTTA+AGG + chr2_2:16799598-16799617 Msa0241320:CDS 20.0%
! AAATCGCTCAAAAAAAAAGA+GGG - chr2_2:16792298-16792317 None:intergenic 25.0%
! AAAATCGCTCAAAAAAAAAG+AGG - chr2_2:16792297-16792316 None:intergenic 25.0%
! TCTCTCAAAAAATATAAGAG+GGG - chr2_2:16792195-16792214 None:intergenic 25.0%
!! GATTTTGAACAAAACACAAT+TGG + chr2_2:16792259-16792278 Msa0241320:intron 25.0%
! AAAATCGCTCAAAAAAAAAG+AGG + chr2_2:16792297-16792316 Msa0241320:intron 25.0%
! AAATCGCTCAAAAAAAAAGA+GGG + chr2_2:16792298-16792317 Msa0241320:intron 25.0%
!!! AGTTTTGGTTTCAAAACAAA+AGG + chr2_2:16792557-16792576 Msa0241320:CDS 25.0%
!!! TTTTTTCTATGGAACAATGA+GGG + chr2_2:16793176-16793195 Msa0241320:intron 25.0%
! ACTCTATAAATACTAACTCA+TGG - chr2_2:16793295-16793314 None:intergenic 25.0%
! TGAGTTAGTATTTATAGAGT+AGG + chr2_2:16793295-16793314 Msa0241320:intron 25.0%
! AGTATTTATAGAGTAGGTTT+AGG + chr2_2:16793301-16793320 Msa0241320:intron 25.0%
! GTATTTATAGAGTAGGTTTA+GGG + chr2_2:16793302-16793321 Msa0241320:intron 25.0%
! TCTTCATGATTCTTACAATA+TGG - chr2_2:16793793-16793812 None:intergenic 25.0%
!!! TTTTTTTCTTTGGAACAATG+AGG + chr2_2:16794116-16794135 Msa0241320:intron 25.0%
!!! TTTTTTCTTTGGAACAATGA+GGG + chr2_2:16794117-16794136 Msa0241320:intron 25.0%
! TTGATTATCATAATGTATGC+AGG - chr2_2:16794150-16794169 None:intergenic 25.0%
! AATACTAACTCATGAACATT+GGG - chr2_2:16794236-16794255 None:intergenic 25.0%
! AAATACTAACTCATGAACAT+TGG - chr2_2:16794237-16794256 None:intergenic 25.0%
!!! AACTTAACATAAGTTCTAAG+AGG - chr2_2:16794461-16794480 None:intergenic 25.0%
! TCTTAGAACTTATGTTAAGT+TGG + chr2_2:16794460-16794479 Msa0241320:intron 25.0%
!! TTATATATTGATGGTTGATG+TGG - chr2_2:16794721-16794740 None:intergenic 25.0%
! ACTATGCAAATATAGGAAAT+TGG + chr2_2:16794831-16794850 Msa0241320:intron 25.0%
! CAATCAAAATCTTAGGTTAT+TGG - chr2_2:16794955-16794974 None:intergenic 25.0%
!!! CAATAACCTAAGATTTTGAT+TGG + chr2_2:16794953-16794972 Msa0241320:intron 25.0%
! GTGATGTATTAATCTCTTAA+TGG + chr2_2:16794980-16794999 Msa0241320:intron 25.0%
! AATGGTCCTTGATTATTAAT+TGG + chr2_2:16794998-16795017 Msa0241320:intron 25.0%
! GATACTCCAATTAATAATCA+AGG - chr2_2:16795007-16795026 None:intergenic 25.0%
!! TGTTTCGGATGAAAATATTT+TGG + chr2_2:16795168-16795187 Msa0241320:CDS 25.0%
! AATGGAAAAAACAATGATGT+TGG + chr2_2:16795216-16795235 Msa0241320:CDS 25.0%
! TCTTCATCAGAAAATTTATG+AGG + chr2_2:16795330-16795349 Msa0241320:intron 25.0%
! CCTATTATTGATCATTTCAA+CGG + chr2_2:16795361-16795380 Msa0241320:CDS 25.0%
! TAATTAGGTAAATCATTGTG+GGG - chr2_2:16795495-16795514 None:intergenic 25.0%
! GTAATTAGGTAAATCATTGT+GGG - chr2_2:16795496-16795515 None:intergenic 25.0%
! AGTAATTAGGTAAATCATTG+TGG - chr2_2:16795497-16795516 None:intergenic 25.0%
! CACAATGGCTATTTAAATTA+TGG - chr2_2:16795731-16795750 None:intergenic 25.0%
! CATAATTTAAATAGCCATTG+TGG + chr2_2:16795729-16795748 Msa0241320:intron 25.0%
! ATCTAAAAACCGACTAATTT+AGG + chr2_2:16795905-16795924 Msa0241320:intron 25.0%
! CTTAGTATTCCTAAATTAGT+CGG - chr2_2:16795917-16795936 None:intergenic 25.0%
! GACTAATTTAGGAATACTAA+GGG + chr2_2:16795916-16795935 Msa0241320:intron 25.0%
!! AATTTGCTTATATTTAGGAC+CGG - chr2_2:16796193-16796212 None:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG + chr2_2:16796120-16796139 Msa0241320:intron 25.0%
! CATTCAATTAATGATGTATG+TGG - chr2_2:16796120-16796139 None:intergenic 25.0%
!! AATTTGCTTATATTTAGGAC+CGG + chr2_2:16796193-16796212 Msa0241320:intron 25.0%
! ATCATATGATTACTCAAAAG+AGG + chr2_2:16796606-16796625 Msa0241320:CDS 25.0%
!!! TCTAATGAATATTCTAAGGT+TGG + chr2_2:16796685-16796704 Msa0241320:intron 25.0%
! ATTTATGAGTAGAGTCAATA+TGG + chr2_2:16796769-16796788 Msa0241320:intron 25.0%
! ATTGTTTAAGCATTCAAAAG+TGG + chr2_2:16796994-16797013 Msa0241320:intron 25.0%
!! TATTTTTCTTGTAGGTTTCA+TGG + chr2_2:16797200-16797219 Msa0241320:intron 25.0%
!! ATTTTTCTTGTAGGTTTCAT+GGG + chr2_2:16797201-16797220 Msa0241320:intron 25.0%
! AAAATACATGTAACATGAGA+TGG - chr2_2:16797474-16797493 None:intergenic 25.0%
! CAACAAAAAATTGAGATATG+TGG - chr2_2:16797697-16797716 None:intergenic 25.0%
!! CTTGTTTATAAGTGACTTTT+AGG - chr2_2:16797721-16797740 None:intergenic 25.0%
!!! TATCATCTGATAGCTTTATA+TGG + chr2_2:16797763-16797782 Msa0241320:intron 25.0%
!!! ATCATCTGATAGCTTTATAT+GGG + chr2_2:16797764-16797783 Msa0241320:intron 25.0%
!!! CTAAAAAACTGTTTAGCTTT+AGG - chr2_2:16798253-16798272 None:intergenic 25.0%
!!! CTTTTAAAACTTTTATCGGT+TGG - chr2_2:16798631-16798650 None:intergenic 25.0%
!!! ACTCATTATTTTTCTTGTAG+TGG + chr2_2:16798771-16798790 Msa0241320:intron 25.0%
!!! CTCATTATTTTTCTTGTAGT+GGG + chr2_2:16798772-16798791 Msa0241320:intron 25.0%
!! ATAACAAACACTTTTGAACT+CGG + chr2_2:16799113-16799132 Msa0241320:intron 25.0%
! CATACAATATATTTGCAAGT+TGG - chr2_2:16799247-16799266 None:intergenic 25.0%
! TATATGTTGAATATAGGGAA+AGG - chr2_2:16799273-16799292 None:intergenic 25.0%
! GGCATATATATGTTGAATAT+AGG - chr2_2:16799279-16799298 None:intergenic 25.0%
! CATATTATGATTGTCAAGAT+TGG - chr2_2:16799382-16799401 None:intergenic 25.0%
! TGGCAATCAAGTTAATAATA+GGG - chr2_2:16799475-16799494 None:intergenic 25.0%
! TTGGCAATCAAGTTAATAAT+AGG - chr2_2:16799476-16799495 None:intergenic 25.0%
!! GTTTTCTCCTTTAAATATAC+CGG + chr2_2:16799589-16799608 Msa0241320:CDS 25.0%
! TTAATGGAATCCTTAAAATC+CGG - chr2_2:16799611-16799630 None:intergenic 25.0%
!!! GATTTTAAGGATTCCATTAA+TGG + chr2_2:16799611-16799630 Msa0241320:CDS 25.0%
GCACAATTAACAAAAGATAG+GGG - chr2_2:16792039-16792058 None:intergenic 30.0%
CGCACAATTAACAAAAGATA+GGG - chr2_2:16792040-16792059 None:intergenic 30.0%
TCGCACAATTAACAAAAGAT+AGG - chr2_2:16792041-16792060 None:intergenic 30.0%
AATCGCTCAAAAAAAAAGAG+GGG - chr2_2:16792299-16792318 None:intergenic 30.0%
GTTTCATCTAACCAGAAATT+GGG - chr2_2:16792113-16792132 None:intergenic 30.0%
AGTTTCATCTAACCAGAAAT+TGG - chr2_2:16792114-16792133 None:intergenic 30.0%
CTCTCAAAAAATATAAGAGG+GGG - chr2_2:16792194-16792213 None:intergenic 30.0%
ATCATTAAAAAAGGGGAAAG+GGG - chr2_2:16792239-16792258 None:intergenic 30.0%
CATCATTAAAAAAGGGGAAA+GGG - chr2_2:16792240-16792259 None:intergenic 30.0%
TCATCATTAAAAAAGGGGAA+AGG - chr2_2:16792241-16792260 None:intergenic 30.0%
AAAACACAATTGGCAAAAGA+TGG + chr2_2:16792269-16792288 Msa0241320:intron 30.0%
AAACACAATTGGCAAAAGAT+GGG + chr2_2:16792270-16792289 Msa0241320:intron 30.0%
AATCGCTCAAAAAAAAAGAG+GGG + chr2_2:16792299-16792318 Msa0241320:intron 30.0%
TATATACTTTCTCACCTGAT+TGG + chr2_2:16792423-16792442 Msa0241320:intron 30.0%
! ATCCAAATCAAGTGAAGTTT+TGG + chr2_2:16792542-16792561 Msa0241320:CDS 30.0%
AACCAAAACTTCACTTGATT+TGG - chr2_2:16792547-16792566 None:intergenic 30.0%
AAACAAAAGGAGTCAACAAA+AGG + chr2_2:16792570-16792589 Msa0241320:CDS 30.0%
TCTTCAATTCCTCTTTCATT+TGG - chr2_2:16792810-16792829 None:intergenic 30.0%
AAGAATAAGATATCATGCAG+TGG + chr2_2:16792826-16792845 Msa0241320:CDS 30.0%
!!! TGAGCAGTAACTTTTTTCTA+TGG + chr2_2:16793165-16793184 Msa0241320:intron 30.0%
!!! CTTTTTTCTATGGAACAATG+AGG + chr2_2:16793175-16793194 Msa0241320:intron 30.0%
! GTGGAATGATAGGTATTTTA+TGG + chr2_2:16793242-16793261 Msa0241320:intron 30.0%
AATACTAACTCATGGACATT+GGG - chr2_2:16793287-16793306 None:intergenic 30.0%
AAATACTAACTCATGGACAT+TGG - chr2_2:16793288-16793307 None:intergenic 30.0%
TCTTCAATTCCTCTTTCATT+TGG - chr2_2:16792810-16792829 None:intergenic 30.0%
AAGAATAAGATATCATGCAG+TGG + chr2_2:16792826-16792845 Msa0241320:CDS 30.0%
AAGTTGTTGCTCACATAAAT+AGG - chr2_2:16794098-16794117 None:intergenic 30.0%
!!! GAGCAACAACTTTTTTTCTT+TGG + chr2_2:16794106-16794125 Msa0241320:intron 30.0%
!! ATAGAGTATGTTTAGGGTTT+TGG + chr2_2:16794257-16794276 Msa0241320:intron 30.0%
AAGGACATATGTATAGGTAA+AGG - chr2_2:16794291-16794310 None:intergenic 30.0%
TACCTATACATATGTCCTTA+AGG + chr2_2:16794292-16794311 Msa0241320:intron 30.0%
ACCTATACATATGTCCTTAA+GGG + chr2_2:16794293-16794312 Msa0241320:intron 30.0%
ATTCATAGTTGTTCCAGTAT+GGG - chr2_2:16794492-16794511 None:intergenic 30.0%
! TAATGTCTCCAGATTTTAAG+AGG + chr2_2:16794521-16794540 Msa0241320:intron 30.0%
TCATATCTCCTCTTAAAATC+TGG - chr2_2:16794532-16794551 None:intergenic 30.0%
!! GATTTTAAGAGGAGATATGA+TGG + chr2_2:16794532-16794551 Msa0241320:intron 30.0%
GTCAGAATGACATTTATACA+AGG - chr2_2:16794632-16794651 None:intergenic 30.0%
!! GTTTCGTTGGTTCTAAATAT+TGG + chr2_2:16794669-16794688 Msa0241320:intron 30.0%
GAATTGTGGATATATAAGAG+AGG + chr2_2:16794918-16794937 Msa0241320:intron 30.0%
ACATCTCCAATCAAAATCTT+AGG - chr2_2:16794962-16794981 None:intergenic 30.0%
! ATATTTTCATCCGAAACAAC+AGG - chr2_2:16795166-16795185 None:intergenic 30.0%
CCGTTGAAATGATCAATAAT+AGG - chr2_2:16795364-16795383 None:intergenic 30.0%
!! AGAAGATTCAACTCTTGTTT+TGG - chr2_2:16795389-16795408 None:intergenic 30.0%
! TAGATTTAAAGCAAGCCATT+TGG + chr2_2:16795426-16795445 Msa0241320:CDS 30.0%
CTAAAAGCAACTTAACCAAA+TGG - chr2_2:16795444-16795463 None:intergenic 30.0%
!!! GGTTAAGTTGCTTTTAGATT+CGG + chr2_2:16795447-16795466 Msa0241320:CDS 30.0%
ACAAAGGGTAAACAGTAATT+AGG - chr2_2:16795510-16795529 None:intergenic 30.0%
ATTACTGTTTACCCTTTGTA+TGG + chr2_2:16795511-16795530 Msa0241320:intron 30.0%
GATTTCAAAAGTCTAGACTT+AGG + chr2_2:16795793-16795812 Msa0241320:intron 30.0%
TAACATCCAATATTTCTCGA+TGG + chr2_2:16795822-16795841 Msa0241320:intron 30.0%
TCTTAACCATCGAGAAATAT+TGG - chr2_2:16795831-16795850 None:intergenic 30.0%
CGACTAATTTAGGAATACTA+AGG + chr2_2:16795915-16795934 Msa0241320:intron 30.0%
TGACACTTGAGTAACTAATA+GGG + chr2_2:16795994-16796013 Msa0241320:intron 30.0%
GATGTATGTGGTTCATAATA+TGG - chr2_2:16796147-16796166 None:intergenic 30.0%
TATTAAAATTGTACTCCCTC+CGG - chr2_2:16796215-16796234 None:intergenic 30.0%
GGTTCTTCAGAAAATCAAAA+TGG + chr2_2:16796361-16796380 Msa0241320:CDS 30.0%
! TCAAAATGGAGTTTTGCAAT+TGG + chr2_2:16796375-16796394 Msa0241320:CDS 30.0%
!!! AAAGAGCTAGGGTTTTAATT+AGG - chr2_2:16796409-16796428 None:intergenic 30.0%
TATGATTACTCAAAAGAGGA+TGG + chr2_2:16796610-16796629 Msa0241320:CDS 30.0%
ATGCTTAAACAATGTCCTAA+GGG - chr2_2:16796987-16797006 None:intergenic 30.0%
AATGCTTAAACAATGTCCTA+AGG - chr2_2:16796988-16797007 None:intergenic 30.0%
CTTCTTAAACAATACCCTTA+GGG + chr2_2:16797105-16797124 Msa0241320:intron 30.0%
!! ATATCTATTTATGATAGCGG+AGG + chr2_2:16797364-16797383 Msa0241320:intron 30.0%
! ATTTGGGTCAATTTTCTATG+TGG - chr2_2:16797816-16797835 None:intergenic 30.0%
! TCAGTGGTTACTTTACTTAA+AGG + chr2_2:16797968-16797987 Msa0241320:intron 30.0%
!! ATGCTTGCTATTAGAAAAAG+TGG + chr2_2:16798109-16798128 Msa0241320:CDS 30.0%
!! TGCTTGCTATTAGAAAAAGT+GGG + chr2_2:16798110-16798129 Msa0241320:CDS 30.0%
!! ATAAAAGTGCCATTGTTGTT+TGG - chr2_2:16798148-16798167 None:intergenic 30.0%
AAAACTGAAAACTGTTTAGC+AGG - chr2_2:16798375-16798394 None:intergenic 30.0%
! CTAAACAGTTTTCAGTTTTC+AGG + chr2_2:16798376-16798395 Msa0241320:intron 30.0%
!! AAACTTTTATCGGTTGGTTA+CGG - chr2_2:16798625-16798644 None:intergenic 30.0%
TAGTGGGATGATAATTATCA+AGG + chr2_2:16798788-16798807 Msa0241320:intron 30.0%
! TGTACTTTTCAACCTAATGT+TGG + chr2_2:16799191-16799210 Msa0241320:intron 30.0%
TAAGTAAATGATGCCAATGT+TGG - chr2_2:16799311-16799330 None:intergenic 30.0%
!! GGGAAAGCATTTACAATAAA+GGG - chr2_2:16799455-16799474 None:intergenic 30.0%
!! AGGGAAAGCATTTACAATAA+AGG - chr2_2:16799456-16799475 None:intergenic 30.0%
TAAAGGAGAAAACACAACAT+AGG - chr2_2:16799582-16799601 None:intergenic 30.0%
TGATGAAGGTTTACCATTAA+TGG - chr2_2:16799627-16799646 None:intergenic 30.0%
ATCGCTCAAAAAAAAAGAGG+GGG - chr2_2:16792300-16792319 None:intergenic 35.0%
AGAAATTGGGCAAAAAGATG+GGG - chr2_2:16792100-16792119 None:intergenic 35.0%
CAGAAATTGGGCAAAAAGAT+GGG - chr2_2:16792101-16792120 None:intergenic 35.0%
ACAATTGGCAAAAAGATAGG+GGG - chr2_2:16792160-16792179 None:intergenic 35.0%
CACAATTGGCAAAAAGATAG+GGG - chr2_2:16792161-16792180 None:intergenic 35.0%
GCACAATTGGCAAAAAGATA+GGG - chr2_2:16792162-16792181 None:intergenic 35.0%
TCATTAAAAAAGGGGAAAGG+GGG - chr2_2:16792238-16792257 None:intergenic 35.0%
AACACAATTGGCAAAAGATG+GGG + chr2_2:16792271-16792290 Msa0241320:intron 35.0%
ATCGCTCAAAAAAAAAGAGG+GGG + chr2_2:16792300-16792319 Msa0241320:intron 35.0%
GGGAAAAAAAAGATCCAATC+AGG - chr2_2:16792440-16792459 None:intergenic 35.0%
TGAGAACAACCAAATGAAAG+AGG + chr2_2:16792798-16792817 Msa0241320:CDS 35.0%
!! TTCAAGTTGAAGTTGTTGCA+TGG - chr2_2:16792887-16792906 None:intergenic 35.0%
AGTAAGTGATGTGGAATGAT+AGG + chr2_2:16793232-16793251 Msa0241320:intron 35.0%
AAGGACAATTGTCTAGGTAA+AGG - chr2_2:16793342-16793361 None:intergenic 35.0%
TACCTAGACAATTGTCCTTA+AGG + chr2_2:16793343-16793362 Msa0241320:intron 35.0%
ACCTAGACAATTGTCCTTAA+GGG + chr2_2:16793344-16793363 Msa0241320:intron 35.0%
CTACTCATTGTTATCACTTG+AGG - chr2_2:16793381-16793400 None:intergenic 35.0%
AGATAATGAGATGATGACCT+TGG + chr2_2:16793399-16793418 Msa0241320:intron 35.0%
GATAATGAGATGATGACCTT+GGG + chr2_2:16793400-16793419 Msa0241320:intron 35.0%
AACATGAGAATAATGACCCT+TGG - chr2_2:16793452-16793471 None:intergenic 35.0%
TTCTCATGTTGTCTATACCA+TGG + chr2_2:16793462-16793481 Msa0241320:intron 35.0%
TGTGACATTCATAGTTGCTA+CGG - chr2_2:16793549-16793568 None:intergenic 35.0%
CAAGAACAACCAAATGAAAG+AGG + chr2_2:16793738-16793757 Msa0241320:CDS 35.0%
!! TTCAAGTTGAAGTTGTTGCA+TGG - chr2_2:16792887-16792906 None:intergenic 35.0%
TATGTATAGGTAAAGGTCCA+AGG - chr2_2:16794284-16794303 None:intergenic 35.0%
TCCCTTAAGGACATATGTAT+AGG - chr2_2:16794297-16794316 None:intergenic 35.0%
CATTCATAGTTGTTCCAGTA+TGG - chr2_2:16794493-16794512 None:intergenic 35.0%
ATGATGGTATGATCTCTTAG+TGG + chr2_2:16794548-16794567 Msa0241320:intron 35.0%
ATGTCATTCTGACATTACTC+AGG + chr2_2:16794639-16794658 Msa0241320:intron 35.0%
ACACTTGAGGAAGAAATTGT+TGG + chr2_2:16794860-16794879 Msa0241320:intron 35.0%
TTGAGGAAGAAATTGTTGGT+CGG + chr2_2:16794864-16794883 Msa0241320:intron 35.0%
AAAACGTTAGTTAGTCCACA+TGG + chr2_2:16794890-16794909 Msa0241320:intron 35.0%
!! GAACTTGTTTTCAGTATGAG+AGG + chr2_2:16795104-16795123 Msa0241320:intron 35.0%
! GGAGAAAATTCCTGTTGTTT+CGG + chr2_2:16795153-16795172 Msa0241320:CDS 35.0%
ATTTCTGTTCTTCTGCATGT+TGG - chr2_2:16795199-16795218 None:intergenic 35.0%
AACATGCAGAAGAACAGAAA+TGG + chr2_2:16795198-16795217 Msa0241320:CDS 35.0%
AGTTGCAATTTCTGCTAAAG+AGG + chr2_2:16795240-16795259 Msa0241320:CDS 35.0%
TAAGAACCAATGATCCCTTA+TGG + chr2_2:16795278-16795297 Msa0241320:CDS 35.0%
AAGAACCAATGATCCCTTAT+GGG + chr2_2:16795279-16795298 Msa0241320:CDS 35.0%
ATGTGAGACTTAACCCATAA+GGG - chr2_2:16795295-16795314 None:intergenic 35.0%
AATGTGAGACTTAACCCATA+AGG - chr2_2:16795296-16795315 None:intergenic 35.0%
! TTTGGCTTCCTTAATCAGTA+CGG - chr2_2:16795583-16795602 None:intergenic 35.0%
TCATCTCAATCCAATAGCTT+AGG - chr2_2:16795763-16795782 None:intergenic 35.0%
GTGACACTTGAGTAACTAAT+AGG + chr2_2:16795993-16796012 Msa0241320:intron 35.0%
TAACATTATCTTACTCCCTC+CGG + chr2_2:16796064-16796083 Msa0241320:intron 35.0%
!! CCGCTTTTGTAACAATAGTT+GGG - chr2_2:16796318-16796337 None:intergenic 35.0%
CCCAACTATTGTTACAAAAG+CGG + chr2_2:16796315-16796334 Msa0241320:CDS 35.0%
!! TCCGCTTTTGTAACAATAGT+TGG - chr2_2:16796319-16796338 None:intergenic 35.0%
! ACAATTGAAGTGCTTGAAGA+AGG + chr2_2:16796340-16796359 Msa0241320:CDS 35.0%
AATTCTCGAGATGGTACAAA+AGG - chr2_2:16796529-16796548 None:intergenic 35.0%
AGAAGGTAAAATTCTCGAGA+TGG - chr2_2:16796538-16796557 None:intergenic 35.0%
! TATTGTGAACAAGTTGAAGC+TGG + chr2_2:16796562-16796581 Msa0241320:CDS 35.0%
GCTTCTTAAACAATACCCTT+AGG + chr2_2:16797104-16797123 Msa0241320:intron 35.0%
ACTTAAAGGAAAGAAGAGTG+TGG + chr2_2:16797982-16798001 Msa0241320:intron 35.0%
!! GATGTTTGACTTGCTTAACA+AGG - chr2_2:16798053-16798072 None:intergenic 35.0%
! TAACATCAGCTATGGATTGT+GGG - chr2_2:16798075-16798094 None:intergenic 35.0%
! TTAACATCAGCTATGGATTG+TGG - chr2_2:16798076-16798095 None:intergenic 35.0%
GCTATCATTAACATCAGCTA+TGG - chr2_2:16798083-16798102 None:intergenic 35.0%
!! GCTTGCTATTAGAAAAAGTG+GGG + chr2_2:16798111-16798130 Msa0241320:CDS 35.0%
CTCTTTCAACCAAACAACAA+TGG + chr2_2:16798136-16798155 Msa0241320:CDS 35.0%
!! AACTTTTATCGGTTGGTTAC+GGG - chr2_2:16798624-16798643 None:intergenic 35.0%
TCTCACATAGATCTCTTGTA+TGG - chr2_2:16799029-16799048 None:intergenic 35.0%
ATACAAGAGATCTATGTGAG+AGG + chr2_2:16799028-16799047 Msa0241320:intron 35.0%
GAAGATAACAAACACTTGAG+AGG + chr2_2:16799137-16799156 Msa0241320:intron 35.0%
CATTACTGCTTACTCTTTAG+AGG - chr2_2:16799173-16799192 None:intergenic 35.0%
TGTTAATGGCATCCAACATT+AGG - chr2_2:16799206-16799225 None:intergenic 35.0%
! TTTGCAAGTTGGAAATGCAT+GGG - chr2_2:16799236-16799255 None:intergenic 35.0%
! ATTTGCAAGTTGGAAATGCA+TGG - chr2_2:16799237-16799256 None:intergenic 35.0%
TGCCTGAAAATAACCAACAT+TGG + chr2_2:16799295-16799314 Msa0241320:intron 35.0%
!! TGCCAATGTTGGTTATTTTC+AGG - chr2_2:16799300-16799319 None:intergenic 35.0%
! AGAAGTGACATTGTTGATGA+AGG - chr2_2:16799641-16799660 None:intergenic 35.0%
! ACAATGTCACTTCTTTCATC+TGG + chr2_2:16799647-16799666 Msa0241320:CDS 35.0%
CAAAACCATCAACAACATCA+GGG + chr2_2:16799805-16799824 Msa0241320:CDS 35.0%
CCAGAAATTGGGCAAAAAGA+TGG - chr2_2:16792102-16792121 None:intergenic 40.0%
! CCATCTTTTTGCCCAATTTC+TGG + chr2_2:16792099-16792118 Msa0241320:intron 40.0%
CGCACAATTGGCAAAAAGAT+AGG - chr2_2:16792163-16792182 None:intergenic 40.0%
TCGCACATTTGGCAAAAGAT+AGG + chr2_2:16792330-16792349 Msa0241320:intron 40.0%
CGCACATTTGGCAAAAGATA+GGG + chr2_2:16792331-16792350 Msa0241320:intron 40.0%
GCACATTTGGCAAAAGATAG+GGG + chr2_2:16792332-16792351 Msa0241320:intron 40.0%
CACATTTGGCAAAAGATAGG+GGG + chr2_2:16792333-16792352 Msa0241320:intron 40.0%
TCACATCTTTGCTTGTCGTT+TGG - chr2_2:16792499-16792518 None:intergenic 40.0%
GCAAAGATGTGATATAGCCA+CGG + chr2_2:16792507-16792526 Msa0241320:CDS 40.0%
TGAAAATGCTCGTCTCAAAG+AGG + chr2_2:16792903-16792922 Msa0241320:CDS 40.0%
CTTTGAGTGACGATGTTGAA+TGG + chr2_2:16793121-16793140 Msa0241320:intron 40.0%
TTTCTATGGAACAATGAGGG+TGG + chr2_2:16793179-16793198 Msa0241320:intron 40.0%
GATCAAGCAAGTAAGTGATG+TGG + chr2_2:16793223-16793242 Msa0241320:intron 40.0%
TCCCTTAAGGACAATTGTCT+AGG - chr2_2:16793348-16793367 None:intergenic 40.0%
AGGACTACAATTGTCCCTTA+AGG - chr2_2:16793361-16793380 None:intergenic 40.0%
GCAATTTGGATCCTTTAGCT+CGG - chr2_2:16793427-16793446 None:intergenic 40.0%
AAGGATCCAAATTGCTTCCA+AGG + chr2_2:16793432-16793451 Msa0241320:intron 40.0%
AGGATCCAAATTGCTTCCAA+GGG + chr2_2:16793433-16793452 Msa0241320:intron 40.0%
AATGACCCTTGGAAGCAATT+TGG - chr2_2:16793441-16793460 None:intergenic 40.0%
TGTCTATACCATGGTAGTTG+CGG + chr2_2:16793471-16793490 Msa0241320:intron 40.0%
TCTAAGTGGCTCTTTGTACA+AGG - chr2_2:16793498-16793517 None:intergenic 40.0%
ATTCATAGTTGCTACGGTCT+GGG - chr2_2:16793543-16793562 None:intergenic 40.0%
AAATGCTCGTCTCAAAGAAG+AGG + chr2_2:16793846-16793865 Msa0241320:CDS 40.0%
CATCGTCACTCAAAGATCAT+AGG - chr2_2:16794056-16794075 None:intergenic 40.0%
!! TTTCTTTGGAACAATGAGGG+TGG + chr2_2:16794120-16794139 Msa0241320:intron 40.0%
TAACTCATGAACATTGGGTC+AGG - chr2_2:16794231-16794250 None:intergenic 40.0%
!! ATGTTTAGGGTTTTGGTCCT+TGG + chr2_2:16794264-16794283 Msa0241320:intron 40.0%
AAGACTACAATCGTCCCTTA+AGG - chr2_2:16794310-16794329 None:intergenic 40.0%
TTTCCATGAGGTCTATACCA+TGG + chr2_2:16794411-16794430 Msa0241320:intron 40.0%
CTCTTTGTACAAGGCTCTTA+AGG - chr2_2:16794438-16794457 None:intergenic 40.0%
TCTAAGAGGCTCTTTGTACA+AGG - chr2_2:16794447-16794466 None:intergenic 40.0%
! TTTAGAGCCTTAGTTCAGCT+TGG + chr2_2:16794572-16794591 Msa0241320:intron 40.0%
TTCTGACATTACTCAGGAGT+TGG + chr2_2:16794645-16794664 Msa0241320:intron 40.0%
! GTGTTGTCCTGATCTTTTGA+TGG + chr2_2:16794798-16794817 Msa0241320:intron 40.0%
TCTTGGACCATCAAAAGATC+AGG - chr2_2:16794808-16794827 None:intergenic 40.0%
AAATTGGACACTCACACTTG+AGG + chr2_2:16794847-16794866 Msa0241320:intron 40.0%
! TCCACATGGACTATGAATTG+TGG + chr2_2:16794904-16794923 Msa0241320:intron 40.0%
TCCACAATTCATAGTCCATG+TGG - chr2_2:16794908-16794927 None:intergenic 40.0%
CTTAACCCATAAGGGATCAT+TGG - chr2_2:16795287-16795306 None:intergenic 40.0%
CTTCCTTAATCAGTACGGTA+CGG - chr2_2:16795578-16795597 None:intergenic 40.0%
AAATGTTAATCAGTGCCTCC+GGG - chr2_2:16795707-16795726 None:intergenic 40.0%
GAAATGTTAATCAGTGCCTC+CGG - chr2_2:16795708-16795727 None:intergenic 40.0%
TGGATTGAGATGATTCACAC+TGG + chr2_2:16795770-16795789 Msa0241320:intron 40.0%
GGATTGAGATGATTCACACT+GGG + chr2_2:16795771-16795790 Msa0241320:intron 40.0%
! TGCTTATATTTAGGACCGGA+GGG - chr2_2:16796197-16796216 None:intergenic 40.0%
! TTGCTTATATTTAGGACCGG+AGG - chr2_2:16796196-16796215 None:intergenic 40.0%
! TTGCTTATATTTAGGACCGG+AGG + chr2_2:16796196-16796215 Msa0241320:intron 40.0%
! TGCTTATATTTAGGACCGGA+GGG + chr2_2:16796197-16796216 Msa0241320:intron 40.0%
CTTGTTCACAATAGCGTAGA+AGG - chr2_2:16796555-16796574 None:intergenic 40.0%
! AACAAGTTGAAGCTGGTACT+TGG + chr2_2:16796569-16796588 Msa0241320:CDS 40.0%
! ACAAGTTGAAGCTGGTACTT+GGG + chr2_2:16796570-16796589 Msa0241320:CDS 40.0%
GAAACATCCAAGTGGAAGAA+TGG - chr2_2:16796639-16796658 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG + chr2_2:16796969-16796988 Msa0241320:intron 40.0%
CTCTATACAGACAGTGTGTT+TGG - chr2_2:16797255-16797274 None:intergenic 40.0%
GTCGATCACACAATTGCATT+TGG + chr2_2:16797280-16797299 Msa0241320:CDS 40.0%
! TGGAGCAGAAAGATTGCTTT+TGG + chr2_2:16797300-16797319 Msa0241320:CDS 40.0%
! GGGTCAATTTTCTATGTGGT+GGG - chr2_2:16797812-16797831 None:intergenic 40.0%
! TGGGTCAATTTTCTATGTGG+TGG - chr2_2:16797813-16797832 None:intergenic 40.0%
TTGACCCAAATAGATCAGTG+TGG + chr2_2:16797825-16797844 Msa0241320:intron 40.0%
TGGACCACACTGATCTATTT+GGG - chr2_2:16797832-16797851 None:intergenic 40.0%
TCTCTCTCATCGAATGGTTA+AGG + chr2_2:16798009-16798028 Msa0241320:intron 40.0%
! AGTCAAACAGCATCTGAGAT+GGG - chr2_2:16798198-16798217 None:intergenic 40.0%
AAGTCAAACAGCATCTGAGA+TGG - chr2_2:16798199-16798218 None:intergenic 40.0%
! AGTCAAACAGCATCTGAGAT+AGG - chr2_2:16798198-16798217 None:intergenic 40.0%
ATGTGTGCAATCTCATGCAT+TGG - chr2_2:16798818-16798837 None:intergenic 40.0%
GAGATTGCACACATTTCAAC+TGG + chr2_2:16798824-16798843 Msa0241320:CDS 40.0%
ATTGCACACATTTCAACTGG+TGG + chr2_2:16798827-16798846 Msa0241320:CDS 40.0%
! GCATGGGTTGTAGATGTTAA+TGG - chr2_2:16799220-16799239 None:intergenic 40.0%
AGGCTGCTCACATGAATTAT+TGG - chr2_2:16799495-16799514 None:intergenic 40.0%
TAATTCATGTGAGCAGCCTA+TGG + chr2_2:16799496-16799515 Msa0241320:intron 40.0%
! AATTATCACCGCACCTTTTG+GGG - chr2_2:16799531-16799550 None:intergenic 40.0%
! GAATTATCACCGCACCTTTT+GGG - chr2_2:16799532-16799551 None:intergenic 40.0%
! TGAATTATCACCGCACCTTT+TGG - chr2_2:16799533-16799552 None:intergenic 40.0%
AGAATGCTTCATAGATCCTC+TGG + chr2_2:16799553-16799572 Msa0241320:CDS 40.0%
GAATGCTTCATAGATCCTCT+GGG + chr2_2:16799554-16799573 Msa0241320:CDS 40.0%
CGAATGAGATTGACTATCGT+TGG - chr2_2:16799684-16799703 None:intergenic 40.0%
ACGATAGTCAATCTCATTCG+AGG + chr2_2:16799684-16799703 Msa0241320:CDS 40.0%
AAGAAGTTCTTTGTTGACCG+TGG + chr2_2:16799715-16799734 Msa0241320:CDS 40.0%
CATCGATAGTTGAAAAGCCA+CGG - chr2_2:16799735-16799754 None:intergenic 40.0%
TAGTCCAGAAGGAGTGAATT+TGG + chr2_2:16799757-16799776 Msa0241320:CDS 40.0%
ACATCCAAATTCACTCCTTC+TGG - chr2_2:16799764-16799783 None:intergenic 40.0%
!!! CCTGATGTTGTTGATGGTTT+TGG - chr2_2:16799807-16799826 None:intergenic 40.0%
CCAAAACCATCAACAACATC+AGG + chr2_2:16799804-16799823 Msa0241320:CDS 40.0%
AGAATCCCTGATGTTGTTGA+TGG - chr2_2:16799813-16799832 None:intergenic 40.0%
TTGGCAAAAGATAGGGGGAA+AGG + chr2_2:16792338-16792357 Msa0241320:intron 45.0%
AAATGCTCGTCTCAAAGAGG+AGG + chr2_2:16792906-16792925 Msa0241320:CDS 45.0%
CATCGTCACTCAAAGATCTC+AGG - chr2_2:16793116-16793135 None:intergenic 45.0%
TAACTCATGGACATTGGGTC+AGG - chr2_2:16793282-16793301 None:intergenic 45.0%
GTCTATACCATGGTAGTTGC+GGG + chr2_2:16793472-16793491 Msa0241320:intron 45.0%
AGCCACTTAGAGCACATGTT+GGG + chr2_2:16793507-16793526 Msa0241320:intron 45.0%
! AACCCAACATGTGCTCTAAG+TGG - chr2_2:16793512-16793531 None:intergenic 45.0%
ACTTAGAGCACATGTTGGGT+TGG + chr2_2:16793511-16793530 Msa0241320:intron 45.0%
CATTCATAGTTGCTACGGTC+TGG - chr2_2:16793544-16793563 None:intergenic 45.0%
AGGGACGATTGTAGTCTTCA+AGG + chr2_2:16794312-16794331 Msa0241320:intron 45.0%
GGGACGATTGTAGTCTTCAA+GGG + chr2_2:16794313-16794332 Msa0241320:intron 45.0%
GTGAGTAGATCATGAGACGA+TGG + chr2_2:16794342-16794361 Msa0241320:intron 45.0%
AAGGGTCCAAATTGCTTCCA+GGG + chr2_2:16794381-16794400 Msa0241320:intron 45.0%
AATGACCCCTGGAAGCAATT+TGG - chr2_2:16794390-16794409 None:intergenic 45.0%
CTCATGGAAATAATGACCCC+TGG - chr2_2:16794401-16794420 None:intergenic 45.0%
CAGGGGTCATTATTTCCATG+AGG + chr2_2:16794399-16794418 Msa0241320:intron 45.0%
TACAAGGCTCTTAAGGACCA+TGG - chr2_2:16794431-16794450 None:intergenic 45.0%
TTGATTCCTTAACCAGTGCC+CGG + chr2_2:16795686-16795705 Msa0241320:intron 45.0%
CTTAGGTCGTTTGACCACAA+TGG - chr2_2:16795746-16795765 None:intergenic 45.0%
GGTCAAACGACCTAAGCTAT+TGG + chr2_2:16795750-16795769 Msa0241320:intron 45.0%
ATGGACTCCATTCTTCCACT+TGG + chr2_2:16796629-16796648 Msa0241320:CDS 45.0%
TCCACTTGGATGTTTCCTTC+TGG + chr2_2:16796643-16796662 Msa0241320:CDS 45.0%
TCCAGAAGGAAACATCCAAG+TGG - chr2_2:16796647-16796666 None:intergenic 45.0%
! TGATGGATCAAGCATCCAGA+AGG - chr2_2:16796661-16796680 None:intergenic 45.0%
CTTGCTAACAAGTGCCCTAA+GGG - chr2_2:16797122-16797141 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTA+AGG - chr2_2:16797123-16797142 None:intergenic 45.0%
! GGTTTCATGGGTTGAACATG+TGG + chr2_2:16797213-16797232 Msa0241320:intron 45.0%
GTGGACCACACTGATCTATT+TGG - chr2_2:16797833-16797852 None:intergenic 45.0%
! AACAGCATCTGAGATGGGAA+AGG - chr2_2:16798193-16798212 None:intergenic 45.0%
GACTTCTTAAGAGATCCTGC+AGG + chr2_2:16798214-16798233 Msa0241320:CDS 45.0%
! ATTATCACCGCACCTTTTGG+GGG - chr2_2:16799530-16799549 None:intergenic 45.0%
AACACAACATAGGATCCCAG+AGG - chr2_2:16799572-16799591 None:intergenic 45.0%
CTATCGATGTCTAGTCCAGA+AGG + chr2_2:16799746-16799765 Msa0241320:CDS 45.0%
!! TATTATTAAATTAAATTACT+TGG - chr2_2:16793632-16793651 None:intergenic 5.0%
!!! ATAATTTTTACATTAAAAAT+TGG - chr2_2:16793960-16793979 None:intergenic 5.0%
!! ATATAAATATTATTTCAATT+AGG - chr2_2:16795041-16795060 None:intergenic 5.0%
!!! TAATTATTATCATATATTTT+TGG + chr2_2:16795949-16795968 Msa0241320:intron 5.0%
!!! TTTTTTTATTAACTTATTTT+TGG - chr2_2:16796796-16796815 None:intergenic 5.0%
!! TAATAAATATTCAAAAAAAA+AGG - chr2_2:16798477-16798496 None:intergenic 5.0%
GGGGTGCAAAATCGCACAAT+TGG - chr2_2:16792052-16792071 None:intergenic 50.0%
GGAAAGGGGGCAAAAAGATG+GGG - chr2_2:16792225-16792244 None:intergenic 50.0%
GGGAAAGGGGGCAAAAAGAT+GGG - chr2_2:16792226-16792245 None:intergenic 50.0%
GGGGTGCAAAATCGCACATT+TGG + chr2_2:16792319-16792338 Msa0241320:intron 50.0%
TGTGATATAGCCACGGAGCT+TGG + chr2_2:16792514-16792533 Msa0241320:CDS 50.0%
GTGATATAGCCACGGAGCTT+GGG + chr2_2:16792515-16792534 Msa0241320:CDS 50.0%
TTCATTCTCCGCTCGAAGTG+CGG - chr2_2:16792767-16792786 None:intergenic 50.0%
CACTTCGAGCGGAGAATGAA+AGG + chr2_2:16792767-16792786 Msa0241320:CDS 50.0%
GAGCCACTTAGAGCACATGT+TGG + chr2_2:16793506-16793525 Msa0241320:intron 50.0%
AGATCATGAGACGATGGCCT+TGG + chr2_2:16794348-16794367 Msa0241320:intron 50.0%
GAAGGGTCCAAATTGCTTCC+AGG + chr2_2:16794380-16794399 Msa0241320:intron 50.0%
AGGGTCCAAATTGCTTCCAG+GGG + chr2_2:16794382-16794401 Msa0241320:intron 50.0%
GGACCATGGTATAGACCTCA+TGG - chr2_2:16794417-16794436 None:intergenic 50.0%
TAGTTGTTCCAGTATGGGCG+AGG - chr2_2:16794487-16794506 None:intergenic 50.0%
AGAGCCTTAGTTCAGCTTGG+TGG + chr2_2:16794575-16794594 Msa0241320:intron 50.0%
GAGCCTTAGTTCAGCTTGGT+GGG + chr2_2:16794576-16794595 Msa0241320:intron 50.0%
TCACCCACCAAGCTGAACTA+AGG - chr2_2:16794582-16794601 None:intergenic 50.0%
!! CTCAGGAGTTGGTGTTTCGT+TGG + chr2_2:16794656-16794675 Msa0241320:intron 50.0%
!! GCACCGTACCGTACTGATTA+AGG + chr2_2:16795572-16795591 Msa0241320:intron 50.0%
GGTGCATCTCTCTCATCGAA+TGG + chr2_2:16798003-16798022 Msa0241320:intron 50.0%
TGGGAAAGGAAGCAACACTG+AGG - chr2_2:16798179-16798198 None:intergenic 50.0%
AGATCCTGCAGGACGTATTC+AGG + chr2_2:16798225-16798244 Msa0241320:CDS 50.0%
GGGGAAAGGGGGCAAAAAGA+TGG - chr2_2:16792227-16792246 None:intergenic 55.0%
TATAGCCACGGAGCTTGGGA+TGG + chr2_2:16792519-16792538 Msa0241320:CDS 55.0%
AACAAGCTCCGCACTTCGAG+CGG + chr2_2:16792756-16792775 Msa0241320:CDS 55.0%
TGACCTTGGGTCCGAGCTAA+AGG + chr2_2:16793413-16793432 Msa0241320:intron 55.0%
! GATCCTTTAGCTCGGACCCA+AGG - chr2_2:16793419-16793438 None:intergenic 55.0%
TACAAGGCCCGCAACTACCA+TGG - chr2_2:16793482-16793501 None:intergenic 55.0%
!! AACTAGCTCTGCACTTCGCG+CGG + chr2_2:16793696-16793715 Msa0241320:CDS 55.0%
CACTTCGCGCGGAGAATGAA+AGG + chr2_2:16793707-16793726 Msa0241320:CDS 55.0%
GCAATTTGGACCCTTCTGCC+TGG - chr2_2:16794376-16794395 None:intergenic 55.0%
AAGTTGGACCTCGCCCATAC+TGG + chr2_2:16794476-16794495 Msa0241320:intron 55.0%
GTCATGCTAACCAGTGTCCC+AGG + chr2_2:16795548-16795567 Msa0241320:intron 55.0%
ATTCCTTAACCAGTGCCCGG+AGG + chr2_2:16795689-16795708 Msa0241320:intron 55.0%
GGAACCTGAATACGTCCTGC+AGG - chr2_2:16798232-16798251 None:intergenic 55.0%
TTTGGGGGAGGAGGTTCCAT+AGG - chr2_2:16799515-16799534 None:intergenic 55.0%
ATGGAACCTCCTCCCCCAAA+AGG + chr2_2:16799515-16799534 Msa0241320:CDS 55.0%
TGGATCCATCCCAAGCTCCG+TGG - chr2_2:16792527-16792546 None:intergenic 60.0%
TAGTTGCTACGGTCTGGGCG+AGG - chr2_2:16793538-16793557 None:intergenic 60.0%
! GAGACGATGGCCTTGGATCC+AGG + chr2_2:16794355-16794374 Msa0241320:intron 60.0%
! TGGCCTTGGATCCAGGCAGA+AGG + chr2_2:16794362-16794381 Msa0241320:intron 60.0%
GGCCTTGGATCCAGGCAGAA+GGG + chr2_2:16794363-16794382 Msa0241320:intron 60.0%
GACCCTTCTGCCTGGATCCA+AGG - chr2_2:16794368-16794387 None:intergenic 60.0%
CAGTACGGTACGGTGCACCT+GGG - chr2_2:16795568-16795587 None:intergenic 60.0%
TCAGTACGGTACGGTGCACC+TGG - chr2_2:16795569-16795588 None:intergenic 60.0%
TAATCAGTGCCTCCGGGCAC+TGG - chr2_2:16795701-16795720 None:intergenic 60.0%
ACCTCCTCCCCCAAAAGGTG+CGG + chr2_2:16799520-16799539 Msa0241320:CDS 60.0%
!! ATCACCGCACCTTTTGGGGG+AGG - chr2_2:16799527-16799546 None:intergenic 60.0%
GTACGGTGCACCTGGGACAC+TGG - chr2_2:16795561-16795580 None:intergenic 65.0%
!! GTGCCTCCGGGCACTGGTTA+AGG - chr2_2:16795695-16795714 None:intergenic 65.0%
!! ACCGCACCTTTTGGGGGAGG+AGG - chr2_2:16799524-16799543 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 16791914 16799847 16791914 ID=Msa0241320;Name=Msa0241320
chr2_2 mRNA 16791914 16799847 16791914 ID=Msa0241320-mRNA-1;Parent=Msa0241320;Name=Msa0241320-mRNA-1;_AED=0.43;_eAED=0.44;_QI=0|0|0|0.92|0.66|0.69|13|0|629
chr2_2 exon 16791914 16791921 16791914 ID=Msa0241320-mRNA-1:exon:6983;Parent=Msa0241320-mRNA-1
chr2_2 exon 16792474 16792591 16792474 ID=Msa0241320-mRNA-1:exon:6984;Parent=Msa0241320-mRNA-1
chr2_2 exon 16792637 16792642 16792637 ID=Msa0241320-mRNA-1:exon:6985;Parent=Msa0241320-mRNA-1
chr2_2 exon 16792739 16792927 16792739 ID=Msa0241320-mRNA-1:exon:6986;Parent=Msa0241320-mRNA-1
chr2_2 exon 16793679 16793867 16793679 ID=Msa0241320-mRNA-1:exon:6987;Parent=Msa0241320-mRNA-1
chr2_2 exon 16795118 16795327 16795118 ID=Msa0241320-mRNA-1:exon:6988;Parent=Msa0241320-mRNA-1
chr2_2 exon 16795340 16795468 16795340 ID=Msa0241320-mRNA-1:exon:6989;Parent=Msa0241320-mRNA-1
chr2_2 exon 16796295 16796396 16796295 ID=Msa0241320-mRNA-1:exon:6990;Parent=Msa0241320-mRNA-1
chr2_2 exon 16796499 16796702 16796499 ID=Msa0241320-mRNA-1:exon:6991;Parent=Msa0241320-mRNA-1
chr2_2 exon 16797214 16797335 16797214 ID=Msa0241320-mRNA-1:exon:6992;Parent=Msa0241320-mRNA-1
chr2_2 exon 16798060 16798246 16798060 ID=Msa0241320-mRNA-1:exon:6993;Parent=Msa0241320-mRNA-1
chr2_2 exon 16798791 16798880 16798791 ID=Msa0241320-mRNA-1:exon:6994;Parent=Msa0241320-mRNA-1
chr2_2 exon 16799512 16799847 16799512 ID=Msa0241320-mRNA-1:exon:6995;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16791914 16791921 16791914 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16792474 16792591 16792474 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16792637 16792642 16792637 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16792739 16792927 16792739 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16793679 16793867 16793679 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16795118 16795327 16795118 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16795340 16795468 16795340 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16796295 16796396 16796295 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16796499 16796702 16796499 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16797214 16797335 16797214 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16798060 16798246 16798060 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16798791 16798880 16798791 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
chr2_2 CDS 16799512 16799847 16799512 ID=Msa0241320-mRNA-1:cds;Parent=Msa0241320-mRNA-1
Gene Sequence

>Msa0241320

ATGACCGTAATATTCACGACAGTCACACATCCAAACGACAAGCAAAGATGTGATATAGCCACGGAGCTTGGGATGGATCCAAATCAAGTGAAGTTTTGGTTTCAAAACAAAAGGAGTCAACAAAAGACAAAAACTCAAAATGAGAAAGCAACAAGCTCCGCACTTCGAGCGGAGAATGAAAGGCTTCTTAATGAGAACAACCAAATGAAAGAGGAATTGAAGAATAAGATATCATGCAGTGGTTCATACTGTAAGAATCATGAAGATTATGAAAACTCCATGCAACAACTTCAACTTGAAAATGCTCGTCTCAAAGAGGAGACTCAAAATGAGAAATCAACTAGCTCTGCACTTCGCGCGGAGAATGAAAGGCTTCTCAACAAGAACAACCAAATGAAAGAGGAATTGAAGAATAAGATATCATGCAGTGGTCCATATTGTAAGAATCATGAAGATTATGAAAACTCCATGCAACAACTTCAACTTGAAAATGCTCGTCTCAAAGAAGAGTATGAGAGGATGTCAAAATTTATTGCTACACATATGGAGAAAATTCCTGTTGTTTCGGATGAAAATATTTTGGTCAAACCAACATGCAGAAGAACAGAAATGGAAAAAACAATGATGTTGGAAGTTGCAATTTCTGCTAAAGAGGAGTTACTTAAGCTCTTAAGAACCAATGATCCCTTATGGGTTAAGTCTCACATTGATCAAAGACTTAAAATTTATGAGGATGTATTTCCTATTATTGATCATTTCAACGGCGCCAAAACAAGAGTTGAATCTTCTAATGATTCAAAAACAGTTAGATTTAAAGCAAGCCATTTGGTTAAGTTGCTTTTAGATTCGGAAAAATGGAAAACTCTTTTCCCAACTATTGTTACAAAAGCGGAAACAATTGAAGTGCTTGAAGAAGGTTCTTCAGAAAATCAAAATGGAGTTTTGCAATTGATGTATGAAGAGATGCATGTTCTTTCGCCTTTTGTACCATCTCGAGAATTTTACCTTCTACGCTATTGTGAACAAGTTGAAGCTGGTACTTGGGTGATAGCTAATGTATCATATGATTACTCAAAAGAGGATGGACTCCATTCTTCCACTTGGATGTTTCCTTCTGGATGCTTGATCCATCAAATTTCTAATGAATATTCTAAGGTTTCATGGGTTGAACATGTGGAAGTCATTGACAAGATCCAAACACACTGTCTGTATAGAGATGTTGTCGATCACACAATTGCATTTGGAGCAGAAAGATTGCTTTTGGATCTTCAAAGAACCAAGTCAAACATCCCACAATCCATAGCTGATGTTAATGATAGCAAGATTATGCTTGCTATTAGAAAAAGTGGGGTACTCTTTCAACCAAACAACAATGGCACTTTTATTGTTGCTACCTCAGTGTTGCTTCCTTTCCCATCTCAGATGCTGTTTGACTTCTTAAGAGATCCTGCAGGACGTATTCAGTGGGATGATAATTATCAAGGAAATCCAATGCATGAGATTGCACACATTTCAACTGGTGGTGACTCAAACAATTATATTTCAATTATTCAGCCTATGGAACCTCCTCCCCCAAAAGGTGCGGTGATAATTCAAGAATGCTTCATAGATCCTCTGGGATCCTATGTTGTGTTTTCTCCTTTAAATATACCGGATTTTAAGGATTCCATTAATGGTAAACCTTCATCAACAATGTCACTTCTTTCATCTGGCTTTGTCATCTCCAACGATAGTCAATCTCATTCGAGGAAAAATGCAAGAAGTTCTTTGTTGACCGTGGCTTTTCAACTATCGATGTCTAGTCCAGAAGGAGTGAATTTGGATGTTGTTGCTAAATCATTCGTGACCAAAACCATCAACAACATCAGGGATTCTTTAATCAATGTCTAA
Protein sequence

>Msa0241320

MTVIFTTVTHPNDKQRCDIATELGMDPNQVKFWFQNKRSQQKTKTQNEKATSSALRAENERLLNENNQMKEELKNKISCSGSYCKNHEDYENSMQQLQLENARLKEETQNEKSTSSALRAENERLLNKNNQMKEELKNKISCSGPYCKNHEDYENSMQQLQLENARLKEEYERMSKFIATHMEKIPVVSDENILVKPTCRRTEMEKTMMLEVAISAKEELLKLLRTNDPLWVKSHIDQRLKIYEDVFPIIDHFNGAKTRVESSNDSKTVRFKASHLVKLLLDSEKWKTLFPTIVTKAETIEVLEEGSSENQNGVLQLMYEEMHVLSPFVPSREFYLLRYCEQVEAGTWVIANVSYDYSKEDGLHSSTWMFPSGCLIHQISNEYSKVSWVEHVEVIDKIQTHCLYRDVVDHTIAFGAERLLLDLQRTKSNIPQSIADVNDSKIMLAIRKSGVLFQPNNNGTFIVATSVLLPFPSQMLFDFLRDPAGRIQWDDNYQGNPMHEIAHISTGGDSNNYISIIQPMEPPPPKGAVIIQECFIDPLGSYVVFSPLNIPDFKDSINGKPSSTMSLLSSGFVISNDSQSHSRKNARSSLLTVAFQLSMSSPEGVNLDVVAKSFVTKTINNIRDSLINV*