Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241770 | XP_013463082.1 | 100.000 | 131 | 0 | 0 | 2 | 132 | 164 | 294 | 3.95e-91 | 276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241770 | sp|P24923|CDC21_MEDSA | 99.237 | 131 | 1 | 0 | 2 | 132 | 161 | 291 | 1.15e-92 | 272 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241770 | A0A072V5L7 | 100.000 | 131 | 0 | 0 | 2 | 132 | 164 | 294 | 1.89e-91 | 276 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
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PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241770 | MtrunA17_Chr2g0293491 | 100.000 | 131 | 0 | 0 | 2 | 132 | 164 | 294 | 3.64e-95 | 276 |
Msa0241770 | MtrunA17_Chr4g0051261 | 90.076 | 131 | 13 | 0 | 2 | 132 | 164 | 294 | 2.22e-87 | 256 |
Msa0241770 | MtrunA17_Chr4g0002001 | 57.480 | 127 | 53 | 1 | 2 | 128 | 181 | 306 | 1.63e-50 | 162 |
Msa0241770 | MtrunA17_Chr1g0187371 | 55.118 | 127 | 56 | 1 | 2 | 128 | 186 | 311 | 2.48e-50 | 162 |
Msa0241770 | MtrunA17_Chr8g0377071 | 51.095 | 137 | 57 | 2 | 1 | 128 | 544 | 679 | 6.87e-42 | 146 |
Msa0241770 | MtrunA17_Chr4g0057791 | 47.794 | 136 | 61 | 2 | 1 | 127 | 379 | 513 | 8.75e-42 | 144 |
Msa0241770 | MtrunA17_Chr8g0358921 | 51.181 | 127 | 62 | 0 | 2 | 128 | 212 | 338 | 5.99e-41 | 139 |
Msa0241770 | MtrunA17_Chr3g0122781 | 44.079 | 152 | 60 | 2 | 1 | 128 | 575 | 725 | 6.41e-37 | 132 |
Msa0241770 | MtrunA17_Chr3g0093391 | 48.000 | 125 | 64 | 1 | 2 | 125 | 198 | 322 | 3.22e-35 | 126 |
Msa0241770 | MtrunA17_Chr3g0093571 | 48.800 | 125 | 63 | 1 | 2 | 125 | 200 | 324 | 3.25e-35 | 126 |
Msa0241770 | MtrunA17_Chr3g0130781 | 44.681 | 141 | 62 | 4 | 1 | 126 | 190 | 329 | 9.07e-34 | 122 |
Msa0241770 | MtrunA17_Chr4g0030151 | 42.105 | 133 | 73 | 2 | 2 | 131 | 200 | 331 | 1.30e-32 | 117 |
Msa0241770 | MtrunA17_Chr8g0378831 | 43.411 | 129 | 71 | 1 | 2 | 128 | 194 | 322 | 3.44e-32 | 116 |
Msa0241770 | MtrunA17_Chr3g0102571 | 42.969 | 128 | 72 | 1 | 2 | 128 | 242 | 369 | 8.09e-32 | 116 |
Msa0241770 | MtrunA17_Chr8g0369451 | 40.909 | 132 | 77 | 1 | 2 | 132 | 159 | 290 | 2.67e-31 | 115 |
Msa0241770 | MtrunA17_Chr6g0483151 | 44.000 | 125 | 69 | 1 | 1 | 125 | 171 | 294 | 9.71e-31 | 113 |
Msa0241770 | MtrunA17_Chr5g0409421 | 40.909 | 132 | 77 | 1 | 2 | 132 | 159 | 290 | 1.00e-30 | 114 |
Msa0241770 | MtrunA17_Chr7g0248461 | 39.683 | 126 | 74 | 1 | 2 | 125 | 199 | 324 | 1.04e-30 | 112 |
Msa0241770 | MtrunA17_Chr3g0141871 | 41.085 | 129 | 74 | 1 | 2 | 128 | 194 | 322 | 1.20e-29 | 110 |
Msa0241770 | MtrunA17_Chr4g0045841 | 39.844 | 128 | 76 | 1 | 2 | 128 | 216 | 343 | 2.82e-29 | 109 |
Msa0241770 | MtrunA17_Chr5g0396361 | 42.400 | 125 | 70 | 2 | 2 | 125 | 301 | 424 | 7.71e-29 | 109 |
Msa0241770 | MtrunA17_Chr3g0131861 | 41.600 | 125 | 71 | 2 | 2 | 125 | 258 | 381 | 9.32e-29 | 109 |
Msa0241770 | MtrunA17_Chr2g0286421 | 42.400 | 125 | 70 | 2 | 2 | 125 | 263 | 386 | 9.65e-29 | 109 |
Msa0241770 | MtrunA17_Chr4g0030231 | 41.085 | 129 | 74 | 1 | 2 | 128 | 201 | 329 | 1.38e-28 | 107 |
Msa0241770 | MtrunA17_Chr8g0387401 | 40.310 | 129 | 75 | 1 | 2 | 128 | 213 | 341 | 1.79e-28 | 107 |
Msa0241770 | MtrunA17_Chr6g0486031 | 39.062 | 128 | 76 | 2 | 2 | 127 | 275 | 402 | 2.86e-28 | 107 |
Msa0241770 | MtrunA17_Chr4g0040141 | 40.945 | 127 | 69 | 3 | 2 | 125 | 290 | 413 | 2.92e-28 | 108 |
Msa0241770 | MtrunA17_Chr4g0061141 | 42.857 | 126 | 70 | 2 | 2 | 126 | 266 | 390 | 2.96e-28 | 108 |
Msa0241770 | MtrunA17_Chr2g0317501 | 40.800 | 125 | 72 | 2 | 2 | 125 | 295 | 418 | 3.52e-28 | 107 |
Msa0241770 | MtrunA17_Chr8g0348481 | 38.095 | 126 | 76 | 1 | 2 | 125 | 198 | 323 | 3.82e-28 | 105 |
Msa0241770 | MtrunA17_Chr8g0390341 | 38.281 | 128 | 77 | 2 | 2 | 127 | 288 | 415 | 6.81e-28 | 106 |
Msa0241770 | MtrunA17_Chr8g0360761 | 46.281 | 121 | 49 | 2 | 7 | 126 | 80 | 185 | 9.68e-28 | 101 |
Msa0241770 | MtrunA17_Chr5g0397261 | 39.535 | 129 | 76 | 1 | 2 | 128 | 202 | 330 | 1.84e-27 | 104 |
Msa0241770 | MtrunA17_Chr6g0453711 | 40.769 | 130 | 75 | 2 | 2 | 130 | 271 | 399 | 1.95e-27 | 105 |
Msa0241770 | MtrunA17_Chr8g0385971 | 42.400 | 125 | 70 | 2 | 2 | 125 | 251 | 374 | 7.40e-27 | 103 |
Msa0241770 | MtrunA17_Chr7g0218071 | 42.857 | 126 | 69 | 3 | 2 | 125 | 281 | 405 | 7.81e-27 | 103 |
Msa0241770 | MtrunA17_Chr4g0066691 | 40.000 | 125 | 73 | 2 | 2 | 125 | 265 | 388 | 2.83e-26 | 102 |
Msa0241770 | MtrunA17_Chr1g0191221 | 39.200 | 125 | 74 | 2 | 2 | 125 | 283 | 406 | 3.08e-26 | 102 |
Msa0241770 | MtrunA17_Chr2g0324461 | 42.188 | 128 | 66 | 3 | 2 | 125 | 302 | 425 | 3.68e-26 | 102 |
Msa0241770 | MtrunA17_Chr7g0273601 | 38.400 | 125 | 75 | 2 | 2 | 125 | 268 | 391 | 7.47e-26 | 101 |
Msa0241770 | MtrunA17_Chr3g0099951 | 37.903 | 124 | 74 | 2 | 6 | 128 | 178 | 299 | 4.34e-25 | 98.2 |
Msa0241770 | MtrunA17_Chr3g0102601 | 37.705 | 122 | 75 | 1 | 8 | 128 | 86 | 207 | 3.20e-24 | 93.6 |
Msa0241770 | MtrunA17_Chr8g0339221 | 38.806 | 134 | 78 | 2 | 2 | 132 | 159 | 291 | 3.30e-24 | 95.9 |
Msa0241770 | MtrunA17_Chr7g0246591 | 36.154 | 130 | 79 | 3 | 2 | 129 | 302 | 429 | 3.78e-24 | 95.9 |
Msa0241770 | MtrunA17_Chr1g0201571 | 42.520 | 127 | 65 | 2 | 2 | 125 | 287 | 408 | 1.55e-23 | 94.7 |
Msa0241770 | MtrunA17_Chr8g0350311 | 32.857 | 140 | 70 | 2 | 2 | 129 | 300 | 427 | 1.91e-22 | 91.3 |
Msa0241770 | MtrunA17_Chr2g0320011 | 32.308 | 130 | 84 | 3 | 2 | 129 | 249 | 376 | 6.36e-22 | 89.7 |
Msa0241770 | MtrunA17_Chr1g0193081 | 33.846 | 130 | 82 | 3 | 2 | 129 | 236 | 363 | 1.11e-21 | 89.0 |
Msa0241770 | MtrunA17_Chr2g0284091 | 32.308 | 130 | 84 | 3 | 2 | 129 | 201 | 328 | 1.24e-21 | 88.6 |
Msa0241770 | MtrunA17_Chr8g0383451 | 44.531 | 128 | 63 | 3 | 2 | 126 | 159 | 281 | 1.31e-21 | 89.0 |
Msa0241770 | MtrunA17_Chr7g0270371 | 31.538 | 130 | 85 | 3 | 2 | 129 | 236 | 363 | 3.23e-21 | 87.4 |
Msa0241770 | MtrunA17_Chr2g0277011 | 30.657 | 137 | 77 | 2 | 2 | 129 | 251 | 378 | 9.00e-21 | 86.3 |
Msa0241770 | MtrunA17_Chr1g0194201 | 31.538 | 130 | 85 | 3 | 2 | 129 | 236 | 363 | 9.61e-21 | 86.3 |
Msa0241770 | MtrunA17_Chr4g0065851 | 36.641 | 131 | 78 | 3 | 2 | 128 | 190 | 319 | 1.81e-19 | 83.2 |
Msa0241770 | MtrunA17_Chr4g0030241 | 53.968 | 63 | 29 | 0 | 2 | 64 | 62 | 124 | 1.97e-19 | 79.3 |
Msa0241770 | MtrunA17_Chr8g0392811 | 35.938 | 128 | 77 | 3 | 2 | 125 | 282 | 408 | 4.34e-19 | 82.0 |
Msa0241770 | MtrunA17_Chr5g0443351 | 39.695 | 131 | 74 | 3 | 2 | 128 | 187 | 316 | 1.07e-18 | 80.9 |
Msa0241770 | MtrunA17_Chr2g0287271 | 37.313 | 134 | 79 | 3 | 2 | 131 | 190 | 322 | 1.43e-18 | 80.5 |
Msa0241770 | MtrunA17_Chr8g0359091 | 39.695 | 131 | 74 | 3 | 2 | 128 | 191 | 320 | 8.87e-18 | 78.2 |
Msa0241770 | MtrunA17_Chr3g0096631 | 38.168 | 131 | 76 | 3 | 2 | 128 | 190 | 319 | 1.47e-16 | 74.7 |
Msa0241770 | MtrunA17_Chr4g0053821 | 31.159 | 138 | 84 | 3 | 2 | 129 | 242 | 378 | 5.89e-16 | 72.8 |
Msa0241770 | MtrunA17_Chr6g0482681 | 36.567 | 134 | 80 | 3 | 2 | 131 | 254 | 386 | 5.93e-16 | 73.2 |
Msa0241770 | MtrunA17_Chr8g0378871 | 33.673 | 98 | 63 | 1 | 30 | 125 | 6 | 103 | 1.88e-15 | 68.6 |
Msa0241770 | MtrunA17_Chr4g0053951 | 31.159 | 138 | 84 | 4 | 2 | 129 | 273 | 409 | 5.03e-15 | 70.1 |
Msa0241770 | MtrunA17_Chr5g0401371 | 28.986 | 138 | 87 | 4 | 2 | 129 | 268 | 404 | 1.64e-14 | 68.9 |
Msa0241770 | MtrunA17_Chr3g0139371 | 31.507 | 146 | 79 | 4 | 1 | 126 | 255 | 399 | 3.38e-14 | 67.8 |
Msa0241770 | MtrunA17_Chr2g0314321 | 34.211 | 152 | 70 | 4 | 2 | 128 | 190 | 336 | 5.69e-14 | 67.4 |
Msa0241770 | MtrunA17_Chr3g0116701 | 32.432 | 148 | 73 | 6 | 1 | 125 | 276 | 419 | 4.42e-12 | 62.0 |
Msa0241770 | MtrunA17_Chr8g0392821 | 31.429 | 105 | 58 | 2 | 19 | 123 | 47 | 137 | 1.85e-11 | 58.5 |
Msa0241770 | MtrunA17_Chr8g0369241 | 51.852 | 54 | 25 | 1 | 6 | 59 | 307 | 359 | 2.52e-11 | 59.7 |
Msa0241770 | MtrunA17_Chr4g0058241 | 31.757 | 148 | 74 | 6 | 1 | 125 | 280 | 423 | 2.79e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241770 | AT3G48750.1 | 75.573 | 131 | 32 | 0 | 2 | 132 | 164 | 294 | 1.02e-72 | 219 |
Msa0241770 | AT1G20930.1 | 58.268 | 127 | 52 | 1 | 2 | 128 | 184 | 309 | 4.39e-53 | 169 |
Msa0241770 | AT2G38620.4 | 58.268 | 127 | 52 | 1 | 2 | 128 | 119 | 244 | 4.61e-53 | 167 |
Msa0241770 | AT2G38620.2 | 58.268 | 127 | 52 | 1 | 2 | 128 | 181 | 306 | 1.76e-52 | 168 |
Msa0241770 | AT3G54180.1 | 58.268 | 127 | 52 | 1 | 2 | 128 | 179 | 304 | 5.31e-52 | 167 |
Msa0241770 | AT1G76540.1 | 54.331 | 127 | 57 | 1 | 2 | 128 | 182 | 307 | 2.95e-50 | 162 |
Msa0241770 | AT5G63370.2 | 51.471 | 136 | 58 | 1 | 1 | 128 | 327 | 462 | 2.13e-43 | 148 |
Msa0241770 | AT5G63370.3 | 51.471 | 136 | 58 | 1 | 1 | 128 | 327 | 462 | 2.13e-43 | 148 |
Msa0241770 | AT5G63370.7 | 51.471 | 136 | 58 | 1 | 1 | 128 | 461 | 596 | 6.30e-43 | 149 |
Msa0241770 | AT5G63370.8 | 51.471 | 136 | 58 | 1 | 1 | 128 | 461 | 596 | 6.30e-43 | 149 |
Msa0241770 | AT5G63370.4 | 51.471 | 136 | 58 | 1 | 1 | 128 | 461 | 596 | 6.30e-43 | 149 |
Msa0241770 | AT5G63370.6 | 51.471 | 136 | 58 | 1 | 1 | 128 | 461 | 596 | 6.30e-43 | 149 |
Msa0241770 | AT5G63370.1 | 51.471 | 136 | 58 | 1 | 1 | 128 | 461 | 596 | 6.30e-43 | 149 |
Msa0241770 | AT1G67580.1 | 49.635 | 137 | 59 | 2 | 1 | 128 | 565 | 700 | 2.29e-41 | 145 |
Msa0241770 | AT1G67580.2 | 49.635 | 137 | 59 | 2 | 1 | 128 | 565 | 700 | 2.29e-41 | 145 |
Msa0241770 | AT1G18040.1 | 46.400 | 125 | 66 | 1 | 1 | 125 | 169 | 292 | 1.01e-35 | 126 |
Msa0241770 | AT5G63610.1 | 47.143 | 140 | 60 | 3 | 1 | 126 | 195 | 334 | 1.07e-35 | 127 |
Msa0241770 | AT1G66750.1 | 48.000 | 125 | 64 | 1 | 1 | 125 | 170 | 293 | 6.84e-35 | 123 |
Msa0241770 | AT1G73690.1 | 44.800 | 125 | 68 | 1 | 1 | 125 | 168 | 291 | 1.55e-34 | 123 |
Msa0241770 | AT5G63370.9 | 61.446 | 83 | 32 | 0 | 1 | 83 | 327 | 409 | 7.47e-34 | 122 |
Msa0241770 | AT5G10270.1 | 45.600 | 125 | 67 | 1 | 2 | 125 | 201 | 325 | 2.14e-33 | 122 |
Msa0241770 | AT5G63370.5 | 61.446 | 83 | 32 | 0 | 1 | 83 | 461 | 543 | 2.38e-33 | 122 |
Msa0241770 | AT5G63370.10 | 61.446 | 83 | 32 | 0 | 1 | 83 | 461 | 543 | 2.38e-33 | 122 |
Msa0241770 | AT5G64960.2 | 44.000 | 125 | 69 | 1 | 2 | 125 | 148 | 272 | 2.67e-33 | 121 |
Msa0241770 | AT5G64960.1 | 44.000 | 125 | 69 | 1 | 2 | 125 | 201 | 325 | 3.04e-33 | 121 |
Msa0241770 | AT3G45640.1 | 43.077 | 130 | 70 | 2 | 2 | 128 | 199 | 327 | 2.09e-32 | 117 |
Msa0241770 | AT3G59790.1 | 41.985 | 131 | 72 | 2 | 2 | 128 | 221 | 351 | 4.20e-32 | 117 |
Msa0241770 | AT4G19110.3 | 39.394 | 132 | 79 | 1 | 2 | 132 | 103 | 234 | 8.96e-30 | 111 |
Msa0241770 | AT4G19110.2 | 39.394 | 132 | 79 | 1 | 2 | 132 | 159 | 290 | 1.45e-29 | 111 |
Msa0241770 | AT4G19110.1 | 39.394 | 132 | 79 | 1 | 2 | 132 | 159 | 290 | 1.60e-29 | 111 |
Msa0241770 | AT5G45430.1 | 39.394 | 132 | 79 | 1 | 2 | 132 | 159 | 290 | 2.09e-29 | 111 |
Msa0241770 | AT4G13020.7 | 44.800 | 125 | 68 | 1 | 2 | 125 | 159 | 283 | 2.77e-29 | 109 |
Msa0241770 | AT5G45430.2 | 39.394 | 132 | 79 | 1 | 2 | 132 | 159 | 290 | 3.00e-29 | 110 |
Msa0241770 | AT4G13020.8 | 44.800 | 125 | 68 | 1 | 2 | 125 | 168 | 292 | 3.22e-29 | 109 |
Msa0241770 | AT4G13020.6 | 44.800 | 125 | 68 | 1 | 2 | 125 | 159 | 283 | 3.54e-29 | 109 |
Msa0241770 | AT4G13020.4 | 44.800 | 125 | 68 | 1 | 2 | 125 | 159 | 283 | 3.77e-29 | 109 |
Msa0241770 | AT1G09600.1 | 42.400 | 125 | 70 | 2 | 2 | 125 | 324 | 447 | 4.13e-29 | 110 |
Msa0241770 | AT4G13020.5 | 44.800 | 125 | 68 | 1 | 2 | 125 | 168 | 292 | 5.17e-29 | 109 |
Msa0241770 | AT4G13020.2 | 44.800 | 125 | 68 | 1 | 2 | 125 | 167 | 291 | 5.39e-29 | 109 |
Msa0241770 | AT4G13020.3 | 44.800 | 125 | 68 | 1 | 2 | 125 | 167 | 291 | 5.44e-29 | 109 |
Msa0241770 | AT4G13020.1 | 44.800 | 125 | 68 | 1 | 2 | 125 | 159 | 283 | 5.66e-29 | 109 |
Msa0241770 | AT3G01085.1 | 44.800 | 125 | 68 | 1 | 2 | 125 | 276 | 400 | 6.74e-29 | 110 |
Msa0241770 | AT3G01085.2 | 44.800 | 125 | 68 | 1 | 2 | 125 | 276 | 400 | 6.74e-29 | 110 |
Msa0241770 | AT4G10010.1 | 44.000 | 125 | 68 | 2 | 2 | 125 | 137 | 260 | 6.97e-29 | 109 |
Msa0241770 | AT3G01085.3 | 44.800 | 125 | 68 | 1 | 2 | 125 | 276 | 400 | 7.31e-29 | 110 |
Msa0241770 | AT1G03740.1 | 40.458 | 131 | 74 | 2 | 2 | 130 | 374 | 502 | 1.36e-28 | 109 |
Msa0241770 | AT4G11330.1 | 40.476 | 126 | 73 | 1 | 2 | 125 | 204 | 329 | 1.80e-28 | 107 |
Msa0241770 | AT4G10010.2 | 44.000 | 125 | 68 | 2 | 2 | 125 | 317 | 440 | 1.93e-28 | 108 |
Msa0241770 | AT1G03740.2 | 40.152 | 132 | 75 | 2 | 2 | 131 | 374 | 503 | 2.42e-28 | 108 |
Msa0241770 | AT5G39420.1 | 44.000 | 125 | 68 | 2 | 2 | 125 | 266 | 389 | 2.83e-28 | 108 |
Msa0241770 | AT5G44290.7 | 41.221 | 131 | 75 | 2 | 2 | 131 | 298 | 427 | 4.65e-28 | 107 |
Msa0241770 | AT5G44290.2 | 41.538 | 130 | 74 | 2 | 2 | 130 | 298 | 426 | 4.66e-28 | 107 |
Msa0241770 | AT5G44290.5 | 41.538 | 130 | 74 | 2 | 2 | 130 | 298 | 426 | 4.66e-28 | 107 |
Msa0241770 | AT5G44290.4 | 41.538 | 130 | 74 | 2 | 2 | 130 | 298 | 426 | 4.66e-28 | 107 |
Msa0241770 | AT5G44290.1 | 41.538 | 130 | 74 | 2 | 2 | 130 | 298 | 426 | 4.66e-28 | 107 |
Msa0241770 | AT5G44290.3 | 41.538 | 130 | 74 | 2 | 2 | 130 | 298 | 426 | 4.66e-28 | 107 |
Msa0241770 | AT4G01370.1 | 38.889 | 126 | 75 | 1 | 2 | 125 | 204 | 329 | 5.17e-28 | 105 |
Msa0241770 | AT5G44290.6 | 41.221 | 131 | 75 | 2 | 2 | 131 | 298 | 427 | 5.50e-28 | 107 |
Msa0241770 | AT1G71530.1 | 42.400 | 125 | 70 | 2 | 2 | 125 | 308 | 431 | 7.08e-28 | 107 |
Msa0241770 | AT1G59580.2 | 40.476 | 126 | 73 | 1 | 2 | 125 | 194 | 319 | 1.09e-27 | 105 |
Msa0241770 | AT1G59580.1 | 40.476 | 126 | 73 | 1 | 2 | 125 | 194 | 319 | 1.09e-27 | 105 |
Msa0241770 | AT1G01560.2 | 38.889 | 126 | 75 | 1 | 2 | 125 | 201 | 326 | 1.10e-27 | 105 |
Msa0241770 | AT2G43790.1 | 39.062 | 128 | 77 | 1 | 2 | 128 | 224 | 351 | 1.15e-27 | 105 |
Msa0241770 | AT1G71530.2 | 42.400 | 125 | 70 | 2 | 2 | 125 | 308 | 431 | 1.16e-27 | 106 |
Msa0241770 | AT4G28980.3 | 39.844 | 128 | 75 | 2 | 2 | 127 | 293 | 420 | 1.30e-27 | 106 |
Msa0241770 | AT4G28980.1 | 39.844 | 128 | 75 | 2 | 2 | 127 | 293 | 420 | 1.30e-27 | 106 |
Msa0241770 | AT4G28980.2 | 39.844 | 128 | 75 | 2 | 2 | 127 | 293 | 420 | 1.30e-27 | 106 |
Msa0241770 | AT1G10210.2 | 40.476 | 126 | 73 | 1 | 2 | 125 | 194 | 319 | 2.22e-27 | 104 |
Msa0241770 | AT1G10210.3 | 40.476 | 126 | 73 | 1 | 2 | 125 | 194 | 319 | 2.22e-27 | 104 |
Msa0241770 | AT1G10210.1 | 40.476 | 126 | 73 | 1 | 2 | 125 | 194 | 319 | 2.22e-27 | 104 |
Msa0241770 | AT2G18170.1 | 41.270 | 126 | 72 | 1 | 2 | 125 | 194 | 319 | 3.25e-27 | 103 |
Msa0241770 | AT1G54610.1 | 40.945 | 127 | 69 | 3 | 2 | 125 | 279 | 402 | 8.67e-27 | 104 |
Msa0241770 | AT1G54610.3 | 40.945 | 127 | 69 | 3 | 2 | 125 | 279 | 402 | 8.67e-27 | 104 |
Msa0241770 | AT1G54610.2 | 40.945 | 127 | 69 | 3 | 2 | 125 | 279 | 402 | 8.67e-27 | 104 |
Msa0241770 | AT1G74330.2 | 40.769 | 130 | 75 | 2 | 2 | 130 | 284 | 412 | 8.79e-27 | 104 |
Msa0241770 | AT1G74330.1 | 40.769 | 130 | 75 | 2 | 2 | 130 | 284 | 412 | 8.82e-27 | 104 |
Msa0241770 | AT5G50860.2 | 40.800 | 125 | 72 | 2 | 2 | 125 | 275 | 398 | 9.97e-27 | 103 |
Msa0241770 | AT1G01560.3 | 38.655 | 119 | 71 | 1 | 2 | 118 | 201 | 319 | 1.08e-26 | 102 |
Msa0241770 | AT1G74330.3 | 40.769 | 130 | 75 | 2 | 2 | 130 | 284 | 412 | 1.10e-26 | 103 |
Msa0241770 | AT5G50860.1 | 40.800 | 125 | 72 | 2 | 2 | 125 | 275 | 398 | 1.42e-26 | 103 |
Msa0241770 | AT4G36450.1 | 39.706 | 136 | 66 | 2 | 2 | 128 | 191 | 319 | 1.58e-26 | 102 |
Msa0241770 | AT1G71530.3 | 42.276 | 123 | 69 | 2 | 2 | 123 | 308 | 429 | 1.94e-26 | 102 |
Msa0241770 | AT2G46070.1 | 37.302 | 126 | 77 | 1 | 2 | 125 | 202 | 327 | 3.87e-26 | 100 |
Msa0241770 | AT1G53050.2 | 43.651 | 126 | 67 | 3 | 2 | 125 | 295 | 418 | 4.20e-26 | 102 |
Msa0241770 | AT1G53050.1 | 43.651 | 126 | 67 | 3 | 2 | 125 | 295 | 418 | 4.20e-26 | 102 |
Msa0241770 | AT1G07880.2 | 39.683 | 126 | 74 | 1 | 2 | 125 | 194 | 319 | 4.23e-26 | 100 |
Msa0241770 | AT2G38620.3 | 73.684 | 57 | 15 | 0 | 2 | 58 | 181 | 237 | 5.42e-26 | 98.6 |
Msa0241770 | AT2G38620.1 | 73.684 | 57 | 15 | 0 | 2 | 58 | 181 | 237 | 5.42e-26 | 98.6 |
Msa0241770 | AT2G46070.3 | 37.302 | 126 | 77 | 1 | 2 | 125 | 236 | 361 | 6.03e-26 | 100 |
Msa0241770 | AT4G22940.1 | 41.406 | 128 | 69 | 3 | 2 | 126 | 265 | 389 | 7.86e-26 | 100 |
Msa0241770 | AT4G22940.2 | 41.406 | 128 | 69 | 3 | 2 | 126 | 265 | 389 | 1.22e-25 | 100 |
Msa0241770 | AT1G18670.3 | 38.636 | 132 | 77 | 2 | 2 | 130 | 293 | 423 | 6.46e-25 | 99.0 |
Msa0241770 | AT1G18670.1 | 38.636 | 132 | 77 | 2 | 2 | 130 | 293 | 423 | 6.57e-25 | 99.0 |
Msa0241770 | AT1G18670.2 | 38.636 | 132 | 77 | 2 | 2 | 130 | 293 | 423 | 9.37e-25 | 98.6 |
Msa0241770 | AT1G33770.1 | 44.800 | 125 | 67 | 2 | 2 | 125 | 302 | 425 | 2.42e-24 | 97.4 |
Msa0241770 | AT2G46070.2 | 37.931 | 116 | 70 | 1 | 2 | 115 | 202 | 317 | 3.86e-24 | 95.1 |
Msa0241770 | AT3G61160.2 | 34.615 | 130 | 81 | 3 | 2 | 129 | 270 | 397 | 4.56e-23 | 93.2 |
Msa0241770 | AT3G61160.4 | 34.615 | 130 | 81 | 3 | 2 | 129 | 263 | 390 | 4.57e-23 | 93.2 |
Msa0241770 | AT3G61160.1 | 34.615 | 130 | 81 | 3 | 2 | 129 | 263 | 390 | 5.26e-23 | 93.2 |
Msa0241770 | AT1G57700.1 | 41.985 | 131 | 72 | 3 | 2 | 130 | 307 | 435 | 8.11e-23 | 93.2 |
Msa0241770 | AT5G14640.1 | 33.077 | 130 | 83 | 3 | 2 | 129 | 235 | 362 | 4.18e-22 | 90.5 |
Msa0241770 | AT5G14640.2 | 33.077 | 130 | 83 | 3 | 2 | 129 | 235 | 362 | 4.18e-22 | 90.5 |
Msa0241770 | AT4G00720.1 | 34.615 | 130 | 81 | 3 | 2 | 129 | 299 | 426 | 9.18e-22 | 89.7 |
Msa0241770 | AT1G06390.2 | 32.308 | 130 | 84 | 3 | 2 | 129 | 231 | 358 | 4.90e-21 | 87.4 |
Msa0241770 | AT1G06390.1 | 32.308 | 130 | 84 | 3 | 2 | 129 | 231 | 358 | 4.90e-21 | 87.4 |
Msa0241770 | AT4G18710.1 | 31.538 | 130 | 85 | 3 | 2 | 129 | 201 | 328 | 5.31e-21 | 87.0 |
Msa0241770 | AT3G05840.2 | 32.308 | 130 | 84 | 3 | 2 | 129 | 234 | 361 | 5.37e-21 | 87.4 |
Msa0241770 | AT3G05840.1 | 32.308 | 130 | 84 | 3 | 2 | 129 | 234 | 361 | 5.37e-21 | 87.4 |
Msa0241770 | AT2G30980.1 | 32.308 | 130 | 84 | 3 | 2 | 129 | 233 | 360 | 7.00e-21 | 87.0 |
Msa0241770 | AT1G57870.3 | 31.387 | 137 | 76 | 2 | 2 | 129 | 243 | 370 | 7.41e-21 | 87.0 |
Msa0241770 | AT1G09840.11 | 34.615 | 130 | 81 | 3 | 2 | 129 | 117 | 244 | 7.72e-21 | 85.5 |
Msa0241770 | AT1G57870.1 | 31.387 | 137 | 76 | 2 | 2 | 129 | 243 | 370 | 9.07e-21 | 86.7 |
Msa0241770 | AT1G57870.4 | 31.387 | 137 | 76 | 2 | 2 | 129 | 243 | 370 | 9.07e-21 | 86.7 |
Msa0241770 | AT1G57870.2 | 31.387 | 137 | 76 | 2 | 2 | 129 | 243 | 370 | 9.07e-21 | 86.7 |
Msa0241770 | AT5G26751.1 | 32.308 | 130 | 84 | 3 | 2 | 129 | 230 | 357 | 1.46e-20 | 86.3 |
Msa0241770 | AT1G09840.3 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.7 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.10 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.6 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.4 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.1 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.9 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.5 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.8 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT1G09840.2 | 31.387 | 137 | 76 | 2 | 2 | 129 | 244 | 371 | 3.04e-20 | 85.5 |
Msa0241770 | AT3G61160.5 | 35.043 | 117 | 72 | 3 | 2 | 116 | 263 | 377 | 7.32e-20 | 84.0 |
Msa0241770 | AT2G01450.3 | 36.567 | 134 | 80 | 3 | 2 | 131 | 181 | 313 | 9.49e-20 | 84.3 |
Msa0241770 | AT2G01450.1 | 36.567 | 134 | 80 | 3 | 2 | 131 | 181 | 313 | 9.49e-20 | 84.3 |
Msa0241770 | AT2G01450.2 | 36.567 | 134 | 80 | 3 | 2 | 131 | 181 | 313 | 9.49e-20 | 84.3 |
Msa0241770 | AT2G01450.4 | 36.567 | 134 | 80 | 3 | 2 | 131 | 181 | 313 | 9.49e-20 | 84.3 |
Msa0241770 | AT5G19010.1 | 36.641 | 131 | 78 | 3 | 2 | 128 | 190 | 319 | 1.26e-18 | 80.9 |
Msa0241770 | AT2G42880.1 | 39.695 | 131 | 74 | 3 | 2 | 128 | 190 | 319 | 1.51e-18 | 80.9 |
Msa0241770 | AT2G42880.2 | 39.695 | 131 | 74 | 3 | 2 | 128 | 190 | 319 | 1.54e-18 | 80.9 |
Msa0241770 | AT3G05050.3 | 37.209 | 129 | 74 | 3 | 2 | 125 | 299 | 425 | 3.95e-18 | 79.7 |
Msa0241770 | AT3G05050.2 | 37.209 | 129 | 74 | 3 | 2 | 125 | 299 | 425 | 3.95e-18 | 79.7 |
Msa0241770 | AT3G05050.1 | 37.209 | 129 | 74 | 3 | 2 | 125 | 299 | 425 | 3.95e-18 | 79.7 |
Msa0241770 | AT3G14720.2 | 41.538 | 130 | 69 | 4 | 2 | 126 | 190 | 317 | 5.83e-18 | 79.0 |
Msa0241770 | AT3G14720.3 | 41.538 | 130 | 69 | 4 | 2 | 126 | 190 | 317 | 5.83e-18 | 79.0 |
Msa0241770 | AT3G14720.1 | 41.538 | 130 | 69 | 4 | 2 | 126 | 190 | 317 | 1.02e-17 | 78.6 |
Msa0241770 | AT2G23080.1 | 32.117 | 137 | 84 | 3 | 2 | 129 | 187 | 323 | 1.30e-17 | 77.4 |
Msa0241770 | AT1G73670.1 | 36.296 | 135 | 73 | 4 | 2 | 128 | 255 | 384 | 1.31e-17 | 78.2 |
Msa0241770 | AT4G18710.2 | 37.975 | 79 | 45 | 1 | 2 | 76 | 195 | 273 | 1.42e-17 | 76.6 |
Msa0241770 | AT3G61160.3 | 38.824 | 85 | 49 | 2 | 2 | 85 | 263 | 345 | 2.12e-17 | 77.0 |
Msa0241770 | AT3G61160.6 | 38.824 | 85 | 49 | 2 | 2 | 85 | 270 | 352 | 2.32e-17 | 77.0 |
Msa0241770 | AT5G67380.2 | 29.197 | 137 | 88 | 3 | 2 | 129 | 230 | 366 | 3.72e-16 | 73.6 |
Msa0241770 | AT1G53510.1 | 39.259 | 135 | 69 | 4 | 2 | 128 | 190 | 319 | 8.52e-16 | 72.8 |
Msa0241770 | AT3G18040.3 | 36.719 | 128 | 76 | 3 | 2 | 125 | 297 | 423 | 1.13e-15 | 72.8 |
Msa0241770 | AT3G18040.4 | 36.719 | 128 | 76 | 3 | 2 | 125 | 297 | 423 | 1.48e-15 | 72.4 |
Msa0241770 | AT3G18040.5 | 36.719 | 128 | 76 | 3 | 2 | 125 | 183 | 309 | 3.17e-15 | 71.2 |
Msa0241770 | AT3G18040.1 | 36.719 | 128 | 76 | 3 | 2 | 125 | 188 | 314 | 3.30e-15 | 71.2 |
Msa0241770 | AT5G67380.1 | 29.197 | 137 | 88 | 3 | 2 | 129 | 263 | 399 | 4.94e-15 | 70.5 |
Msa0241770 | AT2G23070.1 | 32.374 | 139 | 81 | 5 | 2 | 129 | 285 | 421 | 1.08e-14 | 69.7 |
Msa0241770 | AT1G07880.1 | 56.000 | 50 | 22 | 0 | 2 | 51 | 194 | 243 | 2.01e-14 | 67.8 |
Msa0241770 | AT3G18040.2 | 36.719 | 128 | 76 | 3 | 2 | 125 | 100 | 226 | 2.45e-14 | 68.6 |
Msa0241770 | AT1G01560.4 | 54.000 | 50 | 23 | 0 | 2 | 51 | 201 | 250 | 5.47e-14 | 67.0 |
Msa0241770 | AT1G01560.1 | 54.000 | 50 | 23 | 0 | 2 | 51 | 201 | 250 | 5.47e-14 | 67.0 |
Msa0241770 | AT3G50000.1 | 28.467 | 137 | 89 | 3 | 2 | 129 | 257 | 393 | 7.25e-14 | 67.4 |
Msa0241770 | AT4G24740.10 | 31.544 | 149 | 73 | 6 | 1 | 125 | 74 | 217 | 7.96e-14 | 65.9 |
Msa0241770 | AT4G24740.8 | 31.544 | 149 | 73 | 6 | 1 | 125 | 74 | 217 | 7.96e-14 | 65.9 |
Msa0241770 | AT4G24740.6 | 31.544 | 149 | 73 | 6 | 1 | 125 | 177 | 320 | 1.68e-13 | 65.9 |
Msa0241770 | AT4G24740.9 | 31.544 | 149 | 73 | 6 | 1 | 125 | 177 | 320 | 1.68e-13 | 65.9 |
Msa0241770 | AT4G24740.2 | 31.544 | 149 | 73 | 6 | 1 | 125 | 177 | 320 | 1.68e-13 | 65.9 |
Msa0241770 | AT4G24740.1 | 31.544 | 149 | 73 | 6 | 1 | 125 | 280 | 423 | 2.80e-13 | 65.9 |
Msa0241770 | AT4G24740.7 | 31.544 | 149 | 73 | 6 | 1 | 125 | 242 | 385 | 2.86e-13 | 65.5 |
Msa0241770 | AT3G53570.1 | 32.215 | 149 | 73 | 6 | 1 | 125 | 299 | 443 | 4.15e-13 | 65.1 |
Msa0241770 | AT3G53570.4 | 32.215 | 149 | 73 | 6 | 1 | 125 | 299 | 443 | 4.15e-13 | 65.1 |
Msa0241770 | AT3G53570.2 | 32.215 | 149 | 73 | 6 | 1 | 125 | 299 | 443 | 4.15e-13 | 65.1 |
Msa0241770 | AT3G53570.3 | 32.215 | 149 | 73 | 6 | 1 | 125 | 285 | 429 | 4.37e-13 | 65.1 |
Msa0241770 | AT3G53570.5 | 32.215 | 149 | 73 | 6 | 1 | 125 | 285 | 429 | 4.37e-13 | 65.1 |
Msa0241770 | AT1G18150.3 | 35.878 | 131 | 79 | 3 | 2 | 128 | 269 | 398 | 4.49e-13 | 65.1 |
Msa0241770 | AT1G18150.2 | 35.878 | 131 | 79 | 3 | 2 | 128 | 269 | 398 | 4.49e-13 | 65.1 |
Msa0241770 | AT1G18150.1 | 35.878 | 131 | 79 | 3 | 2 | 128 | 269 | 398 | 4.49e-13 | 65.1 |
Msa0241770 | AT1G71530.4 | 53.191 | 47 | 22 | 0 | 2 | 48 | 308 | 354 | 1.37e-12 | 63.5 |
Msa0241770 | AT5G35980.2 | 50.847 | 59 | 28 | 1 | 6 | 64 | 289 | 346 | 2.96e-12 | 62.8 |
Msa0241770 | AT5G35980.3 | 50.847 | 59 | 28 | 1 | 6 | 64 | 254 | 311 | 4.55e-12 | 62.4 |
Msa0241770 | AT5G35980.1 | 50.847 | 59 | 28 | 1 | 6 | 64 | 289 | 346 | 4.65e-12 | 62.4 |
Msa0241770 | AT4G32660.4 | 30.612 | 147 | 80 | 5 | 1 | 126 | 140 | 285 | 1.46e-11 | 60.5 |
Msa0241770 | AT4G32660.1 | 30.612 | 147 | 80 | 5 | 1 | 126 | 252 | 397 | 2.19e-11 | 60.1 |
Msa0241770 | AT4G32660.3 | 30.612 | 147 | 80 | 5 | 1 | 126 | 244 | 389 | 2.35e-11 | 60.1 |
Msa0241770 | AT4G01595.1 | 50.980 | 51 | 25 | 0 | 19 | 69 | 20 | 70 | 2.48e-11 | 57.8 |
Find 55 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAATATGTGCAGAATTTA+TGG | 0.082765 | 2_2:-17744269 | Msa0241770:three_prime_UTR |
TACCATTAAGATATGGAATT+AGG | 0.166785 | 2_2:+17744303 | None:intergenic |
ACCCTAATTCCATATCTTAA+TGG | 0.213240 | 2_2:-17744305 | Msa0241770:exon |
ATGAGTTATTTAAAATATTC+AGG | 0.233768 | 2_2:-17746231 | Msa0241770:intron |
ACCATTAAGATATGGAATTA+GGG | 0.301458 | 2_2:+17744304 | None:intergenic |
GCTCCTGGCGGTAATTCTTT+TGG | 0.308759 | 2_2:+17744366 | None:intergenic |
CGAGATCCAAGCAATATTTC+CGG | 0.312083 | 2_2:+17746349 | None:intergenic |
AGACATTTACTTACCTTAGA+TGG | 0.318673 | 2_2:+17745391 | None:intergenic |
AGACCAGCTGGCTCAAGATT+TGG | 0.324310 | 2_2:+17745280 | None:intergenic |
GGAAATGTTGATTTAAAATC+AGG | 0.327943 | 2_2:+17745421 | None:intergenic |
CCCACTGACCAAACATCAAC+TGG | 0.335027 | 2_2:+17746313 | None:intergenic |
CCTGGCCATGTATCTTCATT+TGG | 0.339457 | 2_2:+17745457 | None:intergenic |
GTTGAATCTGAAATATTTGT+AGG | 0.346235 | 2_2:+17744164 | None:intergenic |
ATTTCCCAGGTGGCCATCTA+AGG | 0.351155 | 2_2:-17745404 | Msa0241770:intron |
ACACCTTTACCATTAAGATA+TGG | 0.374572 | 2_2:+17744296 | None:intergenic |
TCTTGCAATAATATACGTAT+TGG | 0.380187 | 2_2:+17744040 | None:intergenic |
ATTCTACCCCAGTTGATGTT+TGG | 0.400330 | 2_2:-17746321 | Msa0241770:CDS |
ACTCCAGAGCATGCTTTGCT+TGG | 0.419939 | 2_2:-17744395 | Msa0241770:intron |
TTCATGCTCCACAGCGCTCC+TGG | 0.438802 | 2_2:+17744351 | None:intergenic |
AACCGGCGACCTCTATTCCC+TGG | 0.456187 | 2_2:-17746268 | Msa0241770:CDS |
ATTAAATACGACAGGATCCT+AGG | 0.462050 | 2_2:+17744194 | None:intergenic |
TTTAAATAACTCATCAATCT+CGG | 0.469825 | 2_2:+17746240 | None:intergenic |
CCAGTTGATGTTTGGTCAGT+GGG | 0.471352 | 2_2:-17746313 | Msa0241770:CDS |
TACACTGTGGTACCGAGCTC+CGG | 0.471861 | 2_2:-17746368 | Msa0241770:CDS |
ATTCCATATCTTAATGGTAA+AGG | 0.484447 | 2_2:-17744299 | Msa0241770:three_prime_UTR |
AAGTCTGAATAGCAATATAC+AGG | 0.494695 | 2_2:-17744109 | Msa0241770:three_prime_UTR |
GTTCCAAATCTTGAGCCAGC+TGG | 0.499914 | 2_2:-17745283 | Msa0241770:CDS |
ACCGGCGACCTCTATTCCCT+GGG | 0.504127 | 2_2:-17746267 | Msa0241770:CDS |
TCAGGCAATGAAGTTACTCC+TGG | 0.506307 | 2_2:+17745439 | None:intergenic |
CCCAGTTGATGTTTGGTCAG+TGG | 0.508697 | 2_2:-17746314 | Msa0241770:CDS |
CGAGCTCCGGAAATATTGCT+TGG | 0.517006 | 2_2:-17746355 | Msa0241770:CDS |
TCATCAATCTCGGAATCCCC+AGG | 0.521762 | 2_2:+17746250 | None:intergenic |
GATTTGGAACCACAGTTGCT+AGG | 0.531667 | 2_2:+17745296 | None:intergenic |
GGGATGTATATTTGCAGAGA+TGG | 0.536491 | 2_2:-17746293 | Msa0241770:CDS |
CCACCAAAAGAATTACCGCC+AGG | 0.539007 | 2_2:-17744369 | Msa0241770:CDS |
CCAAATGAAGATACATGGCC+AGG | 0.550637 | 2_2:-17745457 | Msa0241770:CDS |
GACAAAATATTAAATACGAC+AGG | 0.550955 | 2_2:+17744186 | None:intergenic |
TCGGAATCCCCAGGGAATAG+AGG | 0.553263 | 2_2:+17746259 | None:intergenic |
TATTTGCAGAGATGGCAAAC+CGG | 0.559286 | 2_2:-17746285 | Msa0241770:CDS |
TTAAGAAGATCAAGACCAGC+TGG | 0.571432 | 2_2:+17745268 | None:intergenic |
GCTACTTTCTTCAAAGACCT+AGG | 0.572462 | 2_2:-17744211 | Msa0241770:three_prime_UTR |
CAAGCAATATTTCCGGAGCT+CGG | 0.578128 | 2_2:+17746356 | None:intergenic |
CCACTGACCAAACATCAACT+GGG | 0.597741 | 2_2:+17746314 | None:intergenic |
CTTACCTTAGATGGCCACCT+GGG | 0.599601 | 2_2:+17745400 | None:intergenic |
CCCCAGGGAATAGAGGTCGC+CGG | 0.615740 | 2_2:+17746266 | None:intergenic |
ACTTACCTTAGATGGCCACC+TGG | 0.622989 | 2_2:+17745399 | None:intergenic |
GTACACCAAATGAAGATACA+TGG | 0.634052 | 2_2:-17745462 | Msa0241770:CDS |
TTTGCAGGACCTAGCAACTG+TGG | 0.634970 | 2_2:-17745305 | Msa0241770:intron |
TTAAATCAACATTTCCCAGG+TGG | 0.647469 | 2_2:-17745414 | Msa0241770:CDS |
CATCAATCTCGGAATCCCCA+GGG | 0.652311 | 2_2:+17746251 | None:intergenic |
AATTACCGCCAGGAGCGCTG+TGG | 0.662850 | 2_2:-17744359 | Msa0241770:CDS |
ATGCTCCACAGCGCTCCTGG+CGG | 0.706473 | 2_2:+17744354 | None:intergenic |
CACTGACCAAACATCAACTG+GGG | 0.711534 | 2_2:+17746315 | None:intergenic |
GTTTGTAGGTAGTTACACTG+TGG | 0.718192 | 2_2:-17746381 | Msa0241770:intron |
CCGGCGACCTCTATTCCCTG+GGG | 0.735477 | 2_2:-17746266 | Msa0241770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACTTCTTTTTTTTTTTTTA+AGG | - | chr2_2:17745516-17745535 | Msa0241770:intron | 10.0% |
!! | AAAAAAGAAAGAAAATTTAA+TGG | + | chr2_2:17745644-17745663 | None:intergenic | 10.0% |
!!! | TTAAATTTTCTTTCTTTTTT+TGG | - | chr2_2:17745644-17745663 | Msa0241770:intron | 10.0% |
!!! | TACTTCTTTTTTTTTTTTTA+AGG | - | chr2_2:17745516-17745535 | Msa0241770:intron | 10.0% |
!! | AAAAAAGAAAGAAAATTTAA+TGG | + | chr2_2:17745644-17745663 | None:intergenic | 10.0% |
!!! | TTAAATTTTCTTTCTTTTTT+TGG | - | chr2_2:17745644-17745663 | Msa0241770:intron | 10.0% |
!!! | ATGAGTTATTTAAAATATTC+AGG | - | chr2_2:17744240-17744259 | Msa0241770:three_prime_UTR | 15.0% |
!!! | TTTTGACTTTAATATTTACA+AGG | - | chr2_2:17744336-17744355 | Msa0241770:CDS | 15.0% |
!!! | TTTGACTTTAATATTTACAA+GGG | - | chr2_2:17744337-17744356 | Msa0241770:CDS | 15.0% |
!! | AATTGAATTGTTGAATAAAT+TGG | - | chr2_2:17744484-17744503 | Msa0241770:intron | 15.0% |
!! | TGTTAAATAGATTTGAAAAA+CGG | - | chr2_2:17744877-17744896 | Msa0241770:intron | 15.0% |
!!! | GATGAAATATTATTTTTCTT+TGG | - | chr2_2:17745242-17745261 | Msa0241770:intron | 15.0% |
!! | ATATATTGATAAATATTGGA+TGG | - | chr2_2:17745456-17745475 | Msa0241770:CDS | 15.0% |
!! | TTTCTTAATAGAAATAACAA+GGG | - | chr2_2:17745599-17745618 | Msa0241770:intron | 15.0% |
!! | AGTTATCAAATAATGAATTA+GGG | - | chr2_2:17745891-17745910 | Msa0241770:intron | 15.0% |
!!! | ATGAGTTATTTAAAATATTC+AGG | - | chr2_2:17744240-17744259 | Msa0241770:three_prime_UTR | 15.0% |
!!! | TTTTGACTTTAATATTTACA+AGG | - | chr2_2:17744336-17744355 | Msa0241770:CDS | 15.0% |
!!! | TTTGACTTTAATATTTACAA+GGG | - | chr2_2:17744337-17744356 | Msa0241770:CDS | 15.0% |
!! | AATTGAATTGTTGAATAAAT+TGG | - | chr2_2:17744484-17744503 | Msa0241770:intron | 15.0% |
!! | TGTTAAATAGATTTGAAAAA+CGG | - | chr2_2:17744877-17744896 | Msa0241770:intron | 15.0% |
!!! | GATGAAATATTATTTTTCTT+TGG | - | chr2_2:17745242-17745261 | Msa0241770:intron | 15.0% |
!! | ATATATTGATAAATATTGGA+TGG | - | chr2_2:17745456-17745475 | Msa0241770:CDS | 15.0% |
!! | TTTCTTAATAGAAATAACAA+GGG | - | chr2_2:17745599-17745618 | Msa0241770:intron | 15.0% |
!! | AGTTATCAAATAATGAATTA+GGG | - | chr2_2:17745891-17745910 | Msa0241770:intron | 15.0% |
!! | TTTAAATAACTCATCAATCT+CGG | + | chr2_2:17744234-17744253 | None:intergenic | 20.0% |
!!! | GTGAATATTTTTATTTCCAT+AGG | - | chr2_2:17744262-17744281 | Msa0241770:three_prime_UTR | 20.0% |
!!! | TTGCTATTCTTATTTATAAG+TGG | - | chr2_2:17744398-17744417 | Msa0241770:intron | 20.0% |
!!! | AACAAATTTTATATGTCAAC+TGG | + | chr2_2:17744861-17744880 | None:intergenic | 20.0% |
!! | GTTAAATAGATTTGAAAAAC+GGG | - | chr2_2:17744878-17744897 | Msa0241770:intron | 20.0% |
!!! | TTCTTTTTATGAAGAATCTT+GGG | - | chr2_2:17744987-17745006 | Msa0241770:intron | 20.0% |
!! | AGTTTATGTTGTTCTTAATT+AGG | - | chr2_2:17745370-17745389 | Msa0241770:intron | 20.0% |
!!! | TTTTTTTAAGGAAGAAAACA+TGG | - | chr2_2:17745528-17745547 | Msa0241770:intron | 20.0% |
!! | GTTTCTTAATAGAAATAACA+AGG | - | chr2_2:17745598-17745617 | Msa0241770:intron | 20.0% |
!!! | CTAATTCATTATTTGATAAC+TGG | + | chr2_2:17745892-17745911 | None:intergenic | 20.0% |
!! | CAGTTATCAAATAATGAATT+AGG | - | chr2_2:17745890-17745909 | Msa0241770:intron | 20.0% |
!! | CAATTTCCATTAAATTTCTT+TGG | - | chr2_2:17746021-17746040 | Msa0241770:intron | 20.0% |
!! | TTTAAATAACTCATCAATCT+CGG | + | chr2_2:17744234-17744253 | None:intergenic | 20.0% |
!!! | GTGAATATTTTTATTTCCAT+AGG | - | chr2_2:17744262-17744281 | Msa0241770:three_prime_UTR | 20.0% |
!!! | TTGCTATTCTTATTTATAAG+TGG | - | chr2_2:17744398-17744417 | Msa0241770:intron | 20.0% |
!!! | AACAAATTTTATATGTCAAC+TGG | + | chr2_2:17744861-17744880 | None:intergenic | 20.0% |
!! | GTTAAATAGATTTGAAAAAC+GGG | - | chr2_2:17744878-17744897 | Msa0241770:intron | 20.0% |
!!! | TTCTTTTTATGAAGAATCTT+GGG | - | chr2_2:17744987-17745006 | Msa0241770:intron | 20.0% |
!! | AGTTTATGTTGTTCTTAATT+AGG | - | chr2_2:17745370-17745389 | Msa0241770:intron | 20.0% |
!!! | TTTTTTTAAGGAAGAAAACA+TGG | - | chr2_2:17745528-17745547 | Msa0241770:intron | 20.0% |
!! | GTTTCTTAATAGAAATAACA+AGG | - | chr2_2:17745598-17745617 | Msa0241770:intron | 20.0% |
!!! | CTAATTCATTATTTGATAAC+TGG | + | chr2_2:17745892-17745911 | None:intergenic | 20.0% |
!! | CAGTTATCAAATAATGAATT+AGG | - | chr2_2:17745890-17745909 | Msa0241770:intron | 20.0% |
!! | CAATTTCCATTAAATTTCTT+TGG | - | chr2_2:17746021-17746040 | Msa0241770:intron | 20.0% |
! | AACTGGAAAATCTAAATTCA+TGG | + | chr2_2:17744844-17744863 | None:intergenic | 25.0% |
! | AATATTCTTTGCTTTCTAAC+AGG | - | chr2_2:17744912-17744931 | Msa0241770:intron | 25.0% |
! | ATATTCTTTGCTTTCTAACA+GGG | - | chr2_2:17744913-17744932 | Msa0241770:intron | 25.0% |
! | ACGCGTAAATATATAACTAT+AGG | + | chr2_2:17744965-17744984 | None:intergenic | 25.0% |
!! | GTTCTTTTTATGAAGAATCT+TGG | - | chr2_2:17744986-17745005 | Msa0241770:intron | 25.0% |
!!! | GGAAATGTTGATTTAAAATC+AGG | + | chr2_2:17745053-17745072 | None:intergenic | 25.0% |
!! | ATTTTAAATCAACATTTCCC+AGG | - | chr2_2:17745054-17745073 | Msa0241770:intron | 25.0% |
! | TTATGTTGTTCTTAATTAGG+AGG | - | chr2_2:17745373-17745392 | Msa0241770:intron | 25.0% |
! | TGCTTCTAAATATATTTCTC+TGG | + | chr2_2:17745433-17745452 | None:intergenic | 25.0% |
! | AAGAAAGAAAATTTAATGGC+TGG | + | chr2_2:17745640-17745659 | None:intergenic | 25.0% |
! | TTCAATGCAAAAGCAATTAA+AGG | - | chr2_2:17745736-17745755 | Msa0241770:intron | 25.0% |
! | TCAATGCAAAAGCAATTAAA+GGG | - | chr2_2:17745737-17745756 | Msa0241770:intron | 25.0% |
! | GAGGATTATGATTAATACAT+GGG | + | chr2_2:17745917-17745936 | None:intergenic | 25.0% |
! | AGAGGATTATGATTAATACA+TGG | + | chr2_2:17745918-17745937 | None:intergenic | 25.0% |
! | ACCATTAAGATATGGAATTA+GGG | + | chr2_2:17746170-17746189 | None:intergenic | 25.0% |
! | TACCATTAAGATATGGAATT+AGG | + | chr2_2:17746171-17746190 | None:intergenic | 25.0% |
! | ATTCCATATCTTAATGGTAA+AGG | - | chr2_2:17746172-17746191 | Msa0241770:intron | 25.0% |
! | GACAAAATATTAAATACGAC+AGG | + | chr2_2:17746288-17746307 | None:intergenic | 25.0% |
!! | GTTGAATCTGAAATATTTGT+AGG | + | chr2_2:17746310-17746329 | None:intergenic | 25.0% |
! | AACTGGAAAATCTAAATTCA+TGG | + | chr2_2:17744844-17744863 | None:intergenic | 25.0% |
! | AATATTCTTTGCTTTCTAAC+AGG | - | chr2_2:17744912-17744931 | Msa0241770:intron | 25.0% |
! | ATATTCTTTGCTTTCTAACA+GGG | - | chr2_2:17744913-17744932 | Msa0241770:intron | 25.0% |
! | ACGCGTAAATATATAACTAT+AGG | + | chr2_2:17744965-17744984 | None:intergenic | 25.0% |
!! | GTTCTTTTTATGAAGAATCT+TGG | - | chr2_2:17744986-17745005 | Msa0241770:intron | 25.0% |
!!! | GGAAATGTTGATTTAAAATC+AGG | + | chr2_2:17745053-17745072 | None:intergenic | 25.0% |
!! | ATTTTAAATCAACATTTCCC+AGG | - | chr2_2:17745054-17745073 | Msa0241770:intron | 25.0% |
! | TTATGTTGTTCTTAATTAGG+AGG | - | chr2_2:17745373-17745392 | Msa0241770:intron | 25.0% |
! | TGCTTCTAAATATATTTCTC+TGG | + | chr2_2:17745433-17745452 | None:intergenic | 25.0% |
! | AAGAAAGAAAATTTAATGGC+TGG | + | chr2_2:17745640-17745659 | None:intergenic | 25.0% |
! | TTCAATGCAAAAGCAATTAA+AGG | - | chr2_2:17745736-17745755 | Msa0241770:intron | 25.0% |
! | TCAATGCAAAAGCAATTAAA+GGG | - | chr2_2:17745737-17745756 | Msa0241770:intron | 25.0% |
! | GAGGATTATGATTAATACAT+GGG | + | chr2_2:17745917-17745936 | None:intergenic | 25.0% |
! | AGAGGATTATGATTAATACA+TGG | + | chr2_2:17745918-17745937 | None:intergenic | 25.0% |
! | ACCATTAAGATATGGAATTA+GGG | + | chr2_2:17746170-17746189 | None:intergenic | 25.0% |
! | TACCATTAAGATATGGAATT+AGG | + | chr2_2:17746171-17746190 | None:intergenic | 25.0% |
! | ATTCCATATCTTAATGGTAA+AGG | - | chr2_2:17746172-17746191 | Msa0241770:intron | 25.0% |
! | GACAAAATATTAAATACGAC+AGG | + | chr2_2:17746288-17746307 | None:intergenic | 25.0% |
!! | GTTGAATCTGAAATATTTGT+AGG | + | chr2_2:17746310-17746329 | None:intergenic | 25.0% |
! | TGTCATTGATGATTGTTTGT+AGG | - | chr2_2:17744076-17744095 | Msa0241770:three_prime_UTR | 30.0% |
TCCATGTTGATATCATTTGA+TGG | - | chr2_2:17744430-17744449 | Msa0241770:intron | 30.0% | |
GAATTGTTGAATAAATTGGC+TGG | - | chr2_2:17744488-17744507 | Msa0241770:intron | 30.0% | |
! | GCTTGTAGTTACTCAATTTT+GGG | + | chr2_2:17744588-17744607 | None:intergenic | 30.0% |
! | AGCTTGTAGTTACTCAATTT+TGG | + | chr2_2:17744589-17744608 | None:intergenic | 30.0% |
ATAAGTCCATAGAGAAAGTA+TGG | - | chr2_2:17744612-17744631 | Msa0241770:intron | 30.0% | |
CAATAACCATACTTTCTCTA+TGG | + | chr2_2:17744621-17744640 | None:intergenic | 30.0% | |
ATTTATGCCAACTTATGAGT+TGG | - | chr2_2:17744657-17744676 | Msa0241770:intron | 30.0% | |
AAGATAACCAACTCATAAGT+TGG | + | chr2_2:17744667-17744686 | None:intergenic | 30.0% | |
GTTGGTTATCTTTAGTGTTA+TGG | - | chr2_2:17744675-17744694 | Msa0241770:intron | 30.0% | |
AATCTCACTGAAAAACACTT+CGG | + | chr2_2:17744707-17744726 | None:intergenic | 30.0% | |
ATAGCAAAGGAGTTCTTAAT+GGG | - | chr2_2:17744787-17744806 | Msa0241770:intron | 30.0% | |
AGACATTTACTTACCTTAGA+TGG | + | chr2_2:17745083-17745102 | None:intergenic | 30.0% | |
GATCACATCAATTCAGATTA+AGG | + | chr2_2:17745112-17745131 | None:intergenic | 30.0% | |
GTTTGTTTATCCCAATAACA+CGG | + | chr2_2:17745347-17745366 | None:intergenic | 30.0% | |
!! | TTCTAAAGCTATGATCAGTA+TGG | + | chr2_2:17745489-17745508 | None:intergenic | 30.0% |
!! | GATCATAGCTTTAGAAAACA+TGG | - | chr2_2:17745493-17745512 | Msa0241770:intron | 30.0% |
ACAAGTGTTCAAAAAAGACA+CGG | + | chr2_2:17745787-17745806 | None:intergenic | 30.0% | |
GAGGAAAAAAACTGATATAG+AGG | + | chr2_2:17745936-17745955 | None:intergenic | 30.0% | |
CAAGTAATTCATGCAAATTG+AGG | + | chr2_2:17745958-17745977 | None:intergenic | 30.0% | |
TCAGCACCAAAGAAATTTAA+TGG | + | chr2_2:17746030-17746049 | None:intergenic | 30.0% | |
ACCCTAATTCCATATCTTAA+TGG | - | chr2_2:17746166-17746185 | Msa0241770:intron | 30.0% | |
ACACCTTTACCATTAAGATA+TGG | + | chr2_2:17746178-17746197 | None:intergenic | 30.0% | |
AGCAATATGTGCAGAATTTA+TGG | - | chr2_2:17746202-17746221 | Msa0241770:intron | 30.0% | |
!!! | ATTTTGATTGTGCCAGAAAT+GGG | - | chr2_2:17746225-17746244 | Msa0241770:intron | 30.0% |
AAGTCTGAATAGCAATATAC+AGG | - | chr2_2:17746362-17746381 | Msa0241770:CDS | 30.0% | |
! | TGTCATTGATGATTGTTTGT+AGG | - | chr2_2:17744076-17744095 | Msa0241770:three_prime_UTR | 30.0% |
TCCATGTTGATATCATTTGA+TGG | - | chr2_2:17744430-17744449 | Msa0241770:intron | 30.0% | |
GAATTGTTGAATAAATTGGC+TGG | - | chr2_2:17744488-17744507 | Msa0241770:intron | 30.0% | |
! | GCTTGTAGTTACTCAATTTT+GGG | + | chr2_2:17744588-17744607 | None:intergenic | 30.0% |
! | AGCTTGTAGTTACTCAATTT+TGG | + | chr2_2:17744589-17744608 | None:intergenic | 30.0% |
ATAAGTCCATAGAGAAAGTA+TGG | - | chr2_2:17744612-17744631 | Msa0241770:intron | 30.0% | |
CAATAACCATACTTTCTCTA+TGG | + | chr2_2:17744621-17744640 | None:intergenic | 30.0% | |
ATTTATGCCAACTTATGAGT+TGG | - | chr2_2:17744657-17744676 | Msa0241770:intron | 30.0% | |
AAGATAACCAACTCATAAGT+TGG | + | chr2_2:17744667-17744686 | None:intergenic | 30.0% | |
GTTGGTTATCTTTAGTGTTA+TGG | - | chr2_2:17744675-17744694 | Msa0241770:intron | 30.0% | |
AATCTCACTGAAAAACACTT+CGG | + | chr2_2:17744707-17744726 | None:intergenic | 30.0% | |
ATAGCAAAGGAGTTCTTAAT+GGG | - | chr2_2:17744787-17744806 | Msa0241770:intron | 30.0% | |
AGACATTTACTTACCTTAGA+TGG | + | chr2_2:17745083-17745102 | None:intergenic | 30.0% | |
GATCACATCAATTCAGATTA+AGG | + | chr2_2:17745112-17745131 | None:intergenic | 30.0% | |
GTTTGTTTATCCCAATAACA+CGG | + | chr2_2:17745347-17745366 | None:intergenic | 30.0% | |
!! | TTCTAAAGCTATGATCAGTA+TGG | + | chr2_2:17745489-17745508 | None:intergenic | 30.0% |
!! | GATCATAGCTTTAGAAAACA+TGG | - | chr2_2:17745493-17745512 | Msa0241770:intron | 30.0% |
ACAAGTGTTCAAAAAAGACA+CGG | + | chr2_2:17745787-17745806 | None:intergenic | 30.0% | |
GAGGAAAAAAACTGATATAG+AGG | + | chr2_2:17745936-17745955 | None:intergenic | 30.0% | |
CAAGTAATTCATGCAAATTG+AGG | + | chr2_2:17745958-17745977 | None:intergenic | 30.0% | |
TCAGCACCAAAGAAATTTAA+TGG | + | chr2_2:17746030-17746049 | None:intergenic | 30.0% | |
ACCCTAATTCCATATCTTAA+TGG | - | chr2_2:17746166-17746185 | Msa0241770:intron | 30.0% | |
ACACCTTTACCATTAAGATA+TGG | + | chr2_2:17746178-17746197 | None:intergenic | 30.0% | |
AGCAATATGTGCAGAATTTA+TGG | - | chr2_2:17746202-17746221 | Msa0241770:intron | 30.0% | |
!!! | ATTTTGATTGTGCCAGAAAT+GGG | - | chr2_2:17746225-17746244 | Msa0241770:intron | 30.0% |
AAGTCTGAATAGCAATATAC+AGG | - | chr2_2:17746362-17746381 | Msa0241770:CDS | 30.0% | |
GCCATCAAATGATATCAACA+TGG | + | chr2_2:17744434-17744453 | None:intergenic | 35.0% | |
TCGTGAAACTAGCATTCAAA+GGG | + | chr2_2:17744462-17744481 | None:intergenic | 35.0% | |
TTCAGAGAAAGAAAACAAGG+GGG | + | chr2_2:17744547-17744566 | None:intergenic | 35.0% | |
GTTCAGAGAAAGAAAACAAG+GGG | + | chr2_2:17744548-17744567 | None:intergenic | 35.0% | |
GGTTCAGAGAAAGAAAACAA+GGG | + | chr2_2:17744549-17744568 | None:intergenic | 35.0% | |
AGGTTCAGAGAAAGAAAACA+AGG | + | chr2_2:17744550-17744569 | None:intergenic | 35.0% | |
!! | TAGTTACTCAATTTTGGGAG+GGG | + | chr2_2:17744583-17744602 | None:intergenic | 35.0% |
!! | GTAGTTACTCAATTTTGGGA+GGG | + | chr2_2:17744584-17744603 | None:intergenic | 35.0% |
! | TGTAGTTACTCAATTTTGGG+AGG | + | chr2_2:17744585-17744604 | None:intergenic | 35.0% |
TTGGCATAAATATTCTGCTG+AGG | + | chr2_2:17744648-17744667 | None:intergenic | 35.0% | |
CATAGCAAAGGAGTTCTTAA+TGG | - | chr2_2:17744786-17744805 | Msa0241770:intron | 35.0% | |
TAGCAAAGGAGTTCTTAATG+GGG | - | chr2_2:17744788-17744807 | Msa0241770:intron | 35.0% | |
GATTTGAAAAACGGGATCAT+AGG | - | chr2_2:17744886-17744905 | Msa0241770:intron | 35.0% | |
GTACACCAAATGAAGATACA+TGG | - | chr2_2:17745009-17745028 | Msa0241770:intron | 35.0% | |
TTAAATCAACATTTCCCAGG+TGG | - | chr2_2:17745057-17745076 | Msa0241770:intron | 35.0% | |
AACCTTATCTTGTACTTTGC+AGG | - | chr2_2:17745151-17745170 | Msa0241770:intron | 35.0% | |
!! | TTTTTGGTGATTGATTGACG+TGG | - | chr2_2:17745660-17745679 | Msa0241770:intron | 35.0% |
GTAATTCATGCAAATTGAGG+AGG | + | chr2_2:17745955-17745974 | None:intergenic | 35.0% | |
!!! | GATTTTGATTGTGCCAGAAA+TGG | - | chr2_2:17746224-17746243 | Msa0241770:intron | 35.0% |
AAAAATAGCACACCCATTTC+TGG | + | chr2_2:17746240-17746259 | None:intergenic | 35.0% | |
ATTAAATACGACAGGATCCT+AGG | + | chr2_2:17746280-17746299 | None:intergenic | 35.0% | |
TCAGACTTGCACAAAAAAGA+AGG | + | chr2_2:17746350-17746369 | None:intergenic | 35.0% | |
GCCATCAAATGATATCAACA+TGG | + | chr2_2:17744434-17744453 | None:intergenic | 35.0% | |
TCGTGAAACTAGCATTCAAA+GGG | + | chr2_2:17744462-17744481 | None:intergenic | 35.0% | |
TTCAGAGAAAGAAAACAAGG+GGG | + | chr2_2:17744547-17744566 | None:intergenic | 35.0% | |
GTTCAGAGAAAGAAAACAAG+GGG | + | chr2_2:17744548-17744567 | None:intergenic | 35.0% | |
GGTTCAGAGAAAGAAAACAA+GGG | + | chr2_2:17744549-17744568 | None:intergenic | 35.0% | |
AGGTTCAGAGAAAGAAAACA+AGG | + | chr2_2:17744550-17744569 | None:intergenic | 35.0% | |
!! | TAGTTACTCAATTTTGGGAG+GGG | + | chr2_2:17744583-17744602 | None:intergenic | 35.0% |
!! | GTAGTTACTCAATTTTGGGA+GGG | + | chr2_2:17744584-17744603 | None:intergenic | 35.0% |
! | TGTAGTTACTCAATTTTGGG+AGG | + | chr2_2:17744585-17744604 | None:intergenic | 35.0% |
TTGGCATAAATATTCTGCTG+AGG | + | chr2_2:17744648-17744667 | None:intergenic | 35.0% | |
CATAGCAAAGGAGTTCTTAA+TGG | - | chr2_2:17744786-17744805 | Msa0241770:intron | 35.0% | |
TAGCAAAGGAGTTCTTAATG+GGG | - | chr2_2:17744788-17744807 | Msa0241770:intron | 35.0% | |
GATTTGAAAAACGGGATCAT+AGG | - | chr2_2:17744886-17744905 | Msa0241770:intron | 35.0% | |
GTACACCAAATGAAGATACA+TGG | - | chr2_2:17745009-17745028 | Msa0241770:intron | 35.0% | |
TTAAATCAACATTTCCCAGG+TGG | - | chr2_2:17745057-17745076 | Msa0241770:intron | 35.0% | |
AACCTTATCTTGTACTTTGC+AGG | - | chr2_2:17745151-17745170 | Msa0241770:intron | 35.0% | |
!! | TTTTTGGTGATTGATTGACG+TGG | - | chr2_2:17745660-17745679 | Msa0241770:intron | 35.0% |
GTAATTCATGCAAATTGAGG+AGG | + | chr2_2:17745955-17745974 | None:intergenic | 35.0% | |
!!! | GATTTTGATTGTGCCAGAAA+TGG | - | chr2_2:17746224-17746243 | Msa0241770:intron | 35.0% |
AAAAATAGCACACCCATTTC+TGG | + | chr2_2:17746240-17746259 | None:intergenic | 35.0% | |
ATTAAATACGACAGGATCCT+AGG | + | chr2_2:17746280-17746299 | None:intergenic | 35.0% | |
TCAGACTTGCACAAAAAAGA+AGG | + | chr2_2:17746350-17746369 | None:intergenic | 35.0% | |
GTTTGTAGGTAGTTACACTG+TGG | - | chr2_2:17744090-17744109 | Msa0241770:three_prime_UTR | 40.0% | |
CGAGATCCAAGCAATATTTC+CGG | + | chr2_2:17744125-17744144 | None:intergenic | 40.0% | |
! | ATTCTACCCCAGTTGATGTT+TGG | - | chr2_2:17744150-17744169 | Msa0241770:three_prime_UTR | 40.0% |
GGGATGTATATTTGCAGAGA+TGG | - | chr2_2:17744178-17744197 | Msa0241770:three_prime_UTR | 40.0% | |
TATTTGCAGAGATGGCAAAC+CGG | - | chr2_2:17744186-17744205 | Msa0241770:three_prime_UTR | 40.0% | |
TCCATAGGACTTGTACTTCT+TGG | - | chr2_2:17744277-17744296 | Msa0241770:three_prime_UTR | 40.0% | |
! | ACCAAGAAGTACAAGTCCTA+TGG | + | chr2_2:17744281-17744300 | None:intergenic | 40.0% |
AACTAGCATTCAAAGGGTCA+TGG | + | chr2_2:17744456-17744475 | None:intergenic | 40.0% | |
CTCGTGAAACTAGCATTCAA+AGG | + | chr2_2:17744463-17744482 | None:intergenic | 40.0% | |
CTGACTGAAATGCATAGCAA+AGG | - | chr2_2:17744774-17744793 | Msa0241770:intron | 40.0% | |
GTCCTGCAAAGTACAAGATA+AGG | + | chr2_2:17745156-17745175 | None:intergenic | 40.0% | |
TTAAGAAGATCAAGACCAGC+TGG | + | chr2_2:17745206-17745225 | None:intergenic | 40.0% | |
GTTTATACCTCGATTGTTGC+CGG | - | chr2_2:17745288-17745307 | Msa0241770:CDS | 40.0% | |
CAAAAAAGACACGGCAATTG+AGG | + | chr2_2:17745778-17745797 | None:intergenic | 40.0% | |
TGGTTTATGCATCCTCTGTA+TGG | - | chr2_2:17745832-17745851 | Msa0241770:intron | 40.0% | |
CTAATTATCCTGCCATACAG+AGG | + | chr2_2:17745847-17745866 | None:intergenic | 40.0% | |
! | GCTACTTTCTTCAAAGACCT+AGG | - | chr2_2:17746260-17746279 | Msa0241770:CDS | 40.0% |
GTTTGTAGGTAGTTACACTG+TGG | - | chr2_2:17744090-17744109 | Msa0241770:three_prime_UTR | 40.0% | |
CGAGATCCAAGCAATATTTC+CGG | + | chr2_2:17744125-17744144 | None:intergenic | 40.0% | |
! | ATTCTACCCCAGTTGATGTT+TGG | - | chr2_2:17744150-17744169 | Msa0241770:three_prime_UTR | 40.0% |
GGGATGTATATTTGCAGAGA+TGG | - | chr2_2:17744178-17744197 | Msa0241770:three_prime_UTR | 40.0% | |
TATTTGCAGAGATGGCAAAC+CGG | - | chr2_2:17744186-17744205 | Msa0241770:three_prime_UTR | 40.0% | |
TCCATAGGACTTGTACTTCT+TGG | - | chr2_2:17744277-17744296 | Msa0241770:three_prime_UTR | 40.0% | |
! | ACCAAGAAGTACAAGTCCTA+TGG | + | chr2_2:17744281-17744300 | None:intergenic | 40.0% |
AACTAGCATTCAAAGGGTCA+TGG | + | chr2_2:17744456-17744475 | None:intergenic | 40.0% | |
CTCGTGAAACTAGCATTCAA+AGG | + | chr2_2:17744463-17744482 | None:intergenic | 40.0% | |
CTGACTGAAATGCATAGCAA+AGG | - | chr2_2:17744774-17744793 | Msa0241770:intron | 40.0% | |
GTCCTGCAAAGTACAAGATA+AGG | + | chr2_2:17745156-17745175 | None:intergenic | 40.0% | |
TTAAGAAGATCAAGACCAGC+TGG | + | chr2_2:17745206-17745225 | None:intergenic | 40.0% | |
GTTTATACCTCGATTGTTGC+CGG | - | chr2_2:17745288-17745307 | Msa0241770:CDS | 40.0% | |
CAAAAAAGACACGGCAATTG+AGG | + | chr2_2:17745778-17745797 | None:intergenic | 40.0% | |
TGGTTTATGCATCCTCTGTA+TGG | - | chr2_2:17745832-17745851 | Msa0241770:intron | 40.0% | |
CTAATTATCCTGCCATACAG+AGG | + | chr2_2:17745847-17745866 | None:intergenic | 40.0% | |
! | GCTACTTTCTTCAAAGACCT+AGG | - | chr2_2:17746260-17746279 | Msa0241770:CDS | 40.0% |
CAAGCAATATTTCCGGAGCT+CGG | + | chr2_2:17744118-17744137 | None:intergenic | 45.0% | |
CACTGACCAAACATCAACTG+GGG | + | chr2_2:17744159-17744178 | None:intergenic | 45.0% | |
CCACTGACCAAACATCAACT+GGG | + | chr2_2:17744160-17744179 | None:intergenic | 45.0% | |
! | CCAGTTGATGTTTGGTCAGT+GGG | - | chr2_2:17744158-17744177 | Msa0241770:three_prime_UTR | 45.0% |
GAAAACAAGGGGGATTAGAC+AGG | + | chr2_2:17744537-17744556 | None:intergenic | 45.0% | |
! | TTGGGAGGGGTAGAGTTTTA+AGG | + | chr2_2:17744570-17744589 | None:intergenic | 45.0% |
CCTGGCCATGTATCTTCATT+TGG | + | chr2_2:17745017-17745036 | None:intergenic | 45.0% | |
CCAAATGAAGATACATGGCC+AGG | - | chr2_2:17745014-17745033 | Msa0241770:intron | 45.0% | |
TCAGGCAATGAAGTTACTCC+TGG | + | chr2_2:17745035-17745054 | None:intergenic | 45.0% | |
! | GATTTGGAACCACAGTTGCT+AGG | + | chr2_2:17745178-17745197 | None:intergenic | 45.0% |
TCGGTCTGAATCCGTGTTAT+TGG | - | chr2_2:17745333-17745352 | Msa0241770:intron | 45.0% | |
! | CGGTCTGAATCCGTGTTATT+GGG | - | chr2_2:17745334-17745353 | Msa0241770:intron | 45.0% |
TTATGCATCCTCTGTATGGC+AGG | - | chr2_2:17745836-17745855 | Msa0241770:intron | 45.0% | |
! | CTGGCGGTAATTCTTTTGGT+GGG | + | chr2_2:17746104-17746123 | None:intergenic | 45.0% |
CAAGCAATATTTCCGGAGCT+CGG | + | chr2_2:17744118-17744137 | None:intergenic | 45.0% | |
CACTGACCAAACATCAACTG+GGG | + | chr2_2:17744159-17744178 | None:intergenic | 45.0% | |
CCACTGACCAAACATCAACT+GGG | + | chr2_2:17744160-17744179 | None:intergenic | 45.0% | |
! | CCAGTTGATGTTTGGTCAGT+GGG | - | chr2_2:17744158-17744177 | Msa0241770:three_prime_UTR | 45.0% |
GAAAACAAGGGGGATTAGAC+AGG | + | chr2_2:17744537-17744556 | None:intergenic | 45.0% | |
! | TTGGGAGGGGTAGAGTTTTA+AGG | + | chr2_2:17744570-17744589 | None:intergenic | 45.0% |
CCTGGCCATGTATCTTCATT+TGG | + | chr2_2:17745017-17745036 | None:intergenic | 45.0% | |
CCAAATGAAGATACATGGCC+AGG | - | chr2_2:17745014-17745033 | Msa0241770:intron | 45.0% | |
TCAGGCAATGAAGTTACTCC+TGG | + | chr2_2:17745035-17745054 | None:intergenic | 45.0% | |
! | GATTTGGAACCACAGTTGCT+AGG | + | chr2_2:17745178-17745197 | None:intergenic | 45.0% |
TCGGTCTGAATCCGTGTTAT+TGG | - | chr2_2:17745333-17745352 | Msa0241770:intron | 45.0% | |
! | CGGTCTGAATCCGTGTTATT+GGG | - | chr2_2:17745334-17745353 | Msa0241770:intron | 45.0% |
TTATGCATCCTCTGTATGGC+AGG | - | chr2_2:17745836-17745855 | Msa0241770:intron | 45.0% | |
! | CTGGCGGTAATTCTTTTGGT+GGG | + | chr2_2:17746104-17746123 | None:intergenic | 45.0% |
!! | AAAAATATATTGATAAATAT+TGG | - | chr2_2:17745452-17745471 | Msa0241770:CDS | 5.0% |
!! | AAAAATATATTGATAAATAT+TGG | - | chr2_2:17745452-17745471 | Msa0241770:CDS | 5.0% |
CGAGCTCCGGAAATATTGCT+TGG | - | chr2_2:17744116-17744135 | Msa0241770:three_prime_UTR | 50.0% | |
! | CCCAGTTGATGTTTGGTCAG+TGG | - | chr2_2:17744157-17744176 | Msa0241770:three_prime_UTR | 50.0% |
CCCACTGACCAAACATCAAC+TGG | + | chr2_2:17744161-17744180 | None:intergenic | 50.0% | |
CATCAATCTCGGAATCCCCA+GGG | + | chr2_2:17744223-17744242 | None:intergenic | 50.0% | |
TCATCAATCTCGGAATCCCC+AGG | + | chr2_2:17744224-17744243 | None:intergenic | 50.0% | |
CAGGCAGATCAGCAAGAATG+AGG | + | chr2_2:17744518-17744537 | None:intergenic | 50.0% | |
ATTTCCCAGGTGGCCATCTA+AGG | - | chr2_2:17745067-17745086 | Msa0241770:intron | 50.0% | |
CTTACCTTAGATGGCCACCT+GGG | + | chr2_2:17745074-17745093 | None:intergenic | 50.0% | |
ACTTACCTTAGATGGCCACC+TGG | + | chr2_2:17745075-17745094 | None:intergenic | 50.0% | |
TTTGCAGGACCTAGCAACTG+TGG | - | chr2_2:17745166-17745185 | Msa0241770:intron | 50.0% | |
GTTCCAAATCTTGAGCCAGC+TGG | - | chr2_2:17745188-17745207 | Msa0241770:intron | 50.0% | |
! | AGACCAGCTGGCTCAAGATT+TGG | + | chr2_2:17745194-17745213 | None:intergenic | 50.0% |
CCATCCTAAGAGACTGAAGC+CGG | + | chr2_2:17745310-17745329 | None:intergenic | 50.0% | |
CGGCTTCAGTCTCTTAGGAT+GGG | - | chr2_2:17745308-17745327 | Msa0241770:intron | 50.0% | |
CAGTCTCTTAGGATGGGTCT+CGG | - | chr2_2:17745314-17745333 | Msa0241770:intron | 50.0% | |
CCAGCTTGAGATGCAGAAGA+GGG | + | chr2_2:17745815-17745834 | None:intergenic | 50.0% | |
ACCAGCTTGAGATGCAGAAG+AGG | + | chr2_2:17745816-17745835 | None:intergenic | 50.0% | |
ACTCCAGAGCATGCTTTGCT+TGG | - | chr2_2:17746076-17746095 | Msa0241770:intron | 50.0% | |
GATCCAAGCAAAGCATGCTC+TGG | + | chr2_2:17746082-17746101 | None:intergenic | 50.0% | |
! | CCTGGCGGTAATTCTTTTGG+TGG | + | chr2_2:17746105-17746124 | None:intergenic | 50.0% |
CCACCAAAAGAATTACCGCC+AGG | - | chr2_2:17746102-17746121 | Msa0241770:intron | 50.0% | |
! | GCTCCTGGCGGTAATTCTTT+TGG | + | chr2_2:17746108-17746127 | None:intergenic | 50.0% |
CGAGCTCCGGAAATATTGCT+TGG | - | chr2_2:17744116-17744135 | Msa0241770:three_prime_UTR | 50.0% | |
! | CCCAGTTGATGTTTGGTCAG+TGG | - | chr2_2:17744157-17744176 | Msa0241770:three_prime_UTR | 50.0% |
CCCACTGACCAAACATCAAC+TGG | + | chr2_2:17744161-17744180 | None:intergenic | 50.0% | |
CATCAATCTCGGAATCCCCA+GGG | + | chr2_2:17744223-17744242 | None:intergenic | 50.0% | |
TCATCAATCTCGGAATCCCC+AGG | + | chr2_2:17744224-17744243 | None:intergenic | 50.0% | |
CAGGCAGATCAGCAAGAATG+AGG | + | chr2_2:17744518-17744537 | None:intergenic | 50.0% | |
ATTTCCCAGGTGGCCATCTA+AGG | - | chr2_2:17745067-17745086 | Msa0241770:intron | 50.0% | |
CTTACCTTAGATGGCCACCT+GGG | + | chr2_2:17745074-17745093 | None:intergenic | 50.0% | |
ACTTACCTTAGATGGCCACC+TGG | + | chr2_2:17745075-17745094 | None:intergenic | 50.0% | |
TTTGCAGGACCTAGCAACTG+TGG | - | chr2_2:17745166-17745185 | Msa0241770:intron | 50.0% | |
GTTCCAAATCTTGAGCCAGC+TGG | - | chr2_2:17745188-17745207 | Msa0241770:intron | 50.0% | |
! | AGACCAGCTGGCTCAAGATT+TGG | + | chr2_2:17745194-17745213 | None:intergenic | 50.0% |
CCATCCTAAGAGACTGAAGC+CGG | + | chr2_2:17745310-17745329 | None:intergenic | 50.0% | |
CGGCTTCAGTCTCTTAGGAT+GGG | - | chr2_2:17745308-17745327 | Msa0241770:intron | 50.0% | |
CAGTCTCTTAGGATGGGTCT+CGG | - | chr2_2:17745314-17745333 | Msa0241770:intron | 50.0% | |
CCAGCTTGAGATGCAGAAGA+GGG | + | chr2_2:17745815-17745834 | None:intergenic | 50.0% | |
ACCAGCTTGAGATGCAGAAG+AGG | + | chr2_2:17745816-17745835 | None:intergenic | 50.0% | |
ACTCCAGAGCATGCTTTGCT+TGG | - | chr2_2:17746076-17746095 | Msa0241770:intron | 50.0% | |
GATCCAAGCAAAGCATGCTC+TGG | + | chr2_2:17746082-17746101 | None:intergenic | 50.0% | |
! | CCTGGCGGTAATTCTTTTGG+TGG | + | chr2_2:17746105-17746124 | None:intergenic | 50.0% |
CCACCAAAAGAATTACCGCC+AGG | - | chr2_2:17746102-17746121 | Msa0241770:intron | 50.0% | |
! | GCTCCTGGCGGTAATTCTTT+TGG | + | chr2_2:17746108-17746127 | None:intergenic | 50.0% |
! | TACACTGTGGTACCGAGCTC+CGG | - | chr2_2:17744103-17744122 | Msa0241770:three_prime_UTR | 55.0% |
TCGGAATCCCCAGGGAATAG+AGG | + | chr2_2:17744215-17744234 | None:intergenic | 55.0% | |
ACTGAAGCCGGCAACAATCG+AGG | + | chr2_2:17745298-17745317 | None:intergenic | 55.0% | |
!! | GTTGCCGGCTTCAGTCTCTT+AGG | - | chr2_2:17745303-17745322 | Msa0241770:intron | 55.0% |
CCGGCTTCAGTCTCTTAGGA+TGG | - | chr2_2:17745307-17745326 | Msa0241770:intron | 55.0% | |
CCCTCTTCTGCATCTCAAGC+TGG | - | chr2_2:17745812-17745831 | Msa0241770:intron | 55.0% | |
! | TACACTGTGGTACCGAGCTC+CGG | - | chr2_2:17744103-17744122 | Msa0241770:three_prime_UTR | 55.0% |
TCGGAATCCCCAGGGAATAG+AGG | + | chr2_2:17744215-17744234 | None:intergenic | 55.0% | |
ACTGAAGCCGGCAACAATCG+AGG | + | chr2_2:17745298-17745317 | None:intergenic | 55.0% | |
!! | GTTGCCGGCTTCAGTCTCTT+AGG | - | chr2_2:17745303-17745322 | Msa0241770:intron | 55.0% |
CCGGCTTCAGTCTCTTAGGA+TGG | - | chr2_2:17745307-17745326 | Msa0241770:intron | 55.0% | |
CCCTCTTCTGCATCTCAAGC+TGG | - | chr2_2:17745812-17745831 | Msa0241770:intron | 55.0% | |
AACCGGCGACCTCTATTCCC+TGG | - | chr2_2:17744203-17744222 | Msa0241770:three_prime_UTR | 60.0% | |
ACCGGCGACCTCTATTCCCT+GGG | - | chr2_2:17744204-17744223 | Msa0241770:three_prime_UTR | 60.0% | |
!! | AATTACCGCCAGGAGCGCTG+TGG | - | chr2_2:17746112-17746131 | Msa0241770:intron | 60.0% |
TTCATGCTCCACAGCGCTCC+TGG | + | chr2_2:17746123-17746142 | None:intergenic | 60.0% | |
AACCGGCGACCTCTATTCCC+TGG | - | chr2_2:17744203-17744222 | Msa0241770:three_prime_UTR | 60.0% | |
ACCGGCGACCTCTATTCCCT+GGG | - | chr2_2:17744204-17744223 | Msa0241770:three_prime_UTR | 60.0% | |
!! | AATTACCGCCAGGAGCGCTG+TGG | - | chr2_2:17746112-17746131 | Msa0241770:intron | 60.0% |
TTCATGCTCCACAGCGCTCC+TGG | + | chr2_2:17746123-17746142 | None:intergenic | 60.0% | |
CCCCAGGGAATAGAGGTCGC+CGG | + | chr2_2:17744208-17744227 | None:intergenic | 65.0% | |
CCGGCGACCTCTATTCCCTG+GGG | - | chr2_2:17744205-17744224 | Msa0241770:three_prime_UTR | 65.0% | |
ATGCTCCACAGCGCTCCTGG+CGG | + | chr2_2:17746120-17746139 | None:intergenic | 65.0% | |
CCCCAGGGAATAGAGGTCGC+CGG | + | chr2_2:17744208-17744227 | None:intergenic | 65.0% | |
CCGGCGACCTCTATTCCCTG+GGG | - | chr2_2:17744205-17744224 | Msa0241770:three_prime_UTR | 65.0% | |
ATGCTCCACAGCGCTCCTGG+CGG | + | chr2_2:17746120-17746139 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 17744043 | 17746450 | 17744043 | ID=Msa0241770;Name=Msa0241770 |
chr2_2 | mRNA | 17744043 | 17746450 | 17744043 | ID=Msa0241770-mRNA-1;Parent=Msa0241770;Name=Msa0241770-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.75|0.6|0.8|1|1|5|278|132 |
chr2_2 | exon | 17744043 | 17744410 | 17744043 | ID=Msa0241770-mRNA-1:exon:7213;Parent=Msa0241770-mRNA-1 |
chr2_2 | exon | 17745267 | 17745320 | 17745267 | ID=Msa0241770-mRNA-1:exon:7212;Parent=Msa0241770-mRNA-1 |
chr2_2 | exon | 17745405 | 17745492 | 17745405 | ID=Msa0241770-mRNA-1:exon:7211;Parent=Msa0241770-mRNA-1 |
chr2_2 | exon | 17746232 | 17746395 | 17746232 | ID=Msa0241770-mRNA-1:exon:7210;Parent=Msa0241770-mRNA-1 |
chr2_2 | exon | 17746448 | 17746450 | 17746448 | ID=Msa0241770-mRNA-1:exon:7209;Parent=Msa0241770-mRNA-1 |
chr2_2 | CDS | 17746448 | 17746450 | 17746448 | ID=Msa0241770-mRNA-1:cds;Parent=Msa0241770-mRNA-1 |
chr2_2 | CDS | 17746232 | 17746395 | 17746232 | ID=Msa0241770-mRNA-1:cds;Parent=Msa0241770-mRNA-1 |
chr2_2 | CDS | 17745405 | 17745492 | 17745405 | ID=Msa0241770-mRNA-1:cds;Parent=Msa0241770-mRNA-1 |
chr2_2 | CDS | 17745267 | 17745320 | 17745267 | ID=Msa0241770-mRNA-1:cds;Parent=Msa0241770-mRNA-1 |
chr2_2 | CDS | 17744321 | 17744410 | 17744321 | ID=Msa0241770-mRNA-1:cds;Parent=Msa0241770-mRNA-1 |
chr2_2 | three_prime_UTR | 17744043 | 17744320 | 17744043 | ID=Msa0241770-mRNA-1:three_prime_utr;Parent=Msa0241770-mRNA-1 |
Gene Sequence |
Protein sequence |