Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244800 | XP_013464650.1 | 95.052 | 384 | 16 | 1 | 1 | 384 | 1 | 381 | 0.0 | 761 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244800 | sp|O04017|NAC98_ARATH | 51.106 | 407 | 137 | 12 | 4 | 384 | 5 | 375 | 4.72e-119 | 353 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244800 | A0A072VKK5 | 95.052 | 384 | 16 | 1 | 1 | 384 | 1 | 381 | 0.0 | 761 |
Gene ID | Type | Classification |
---|---|---|
Msa0244800 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244800 | MtrunA17_Chr2g0316971 | 95.052 | 384 | 16 | 1 | 1 | 384 | 1 | 381 | 0.0 | 761 |
Msa0244800 | MtrunA17_Chr4g0060931 | 52.922 | 308 | 92 | 9 | 23 | 326 | 17 | 275 | 1.88e-90 | 276 |
Msa0244800 | MtrunA17_Chr3g0091921 | 51.839 | 299 | 90 | 7 | 23 | 315 | 16 | 266 | 6.71e-90 | 273 |
Msa0244800 | MtrunA17_Chr6g0453451 | 49.153 | 295 | 106 | 6 | 22 | 316 | 19 | 269 | 7.38e-86 | 263 |
Msa0244800 | MtrunA17_Chr6g0461661 | 46.918 | 292 | 127 | 7 | 23 | 314 | 18 | 281 | 9.27e-82 | 254 |
Msa0244800 | MtrunA17_Chr7g0253011 | 59.809 | 209 | 65 | 3 | 23 | 229 | 17 | 208 | 1.95e-81 | 254 |
Msa0244800 | MtrunA17_Chr3g0139331 | 58.373 | 209 | 82 | 2 | 23 | 230 | 11 | 215 | 4.66e-81 | 252 |
Msa0244800 | MtrunA17_Chr1g0147421 | 69.461 | 167 | 46 | 2 | 11 | 176 | 15 | 177 | 8.06e-81 | 251 |
Msa0244800 | MtrunA17_Chr6g0484441 | 74.522 | 157 | 34 | 3 | 20 | 176 | 2 | 152 | 8.58e-81 | 250 |
Msa0244800 | MtrunA17_Chr7g0217721 | 53.750 | 240 | 78 | 5 | 8 | 233 | 4 | 224 | 1.11e-75 | 238 |
Msa0244800 | MtrunA17_Chr3g0144271 | 73.944 | 142 | 33 | 2 | 23 | 163 | 23 | 161 | 4.56e-70 | 226 |
Msa0244800 | MtrunA17_Chr2g0312321 | 40.643 | 342 | 147 | 12 | 20 | 354 | 8 | 300 | 7.76e-67 | 214 |
Msa0244800 | MtrunA17_Chr7g0217711 | 68.966 | 145 | 43 | 1 | 8 | 152 | 4 | 146 | 4.68e-66 | 207 |
Msa0244800 | MtrunA17_Chr1g0183741 | 55.556 | 162 | 66 | 1 | 21 | 182 | 8 | 163 | 8.49e-62 | 200 |
Msa0244800 | MtrunA17_Chr4g0017921 | 58.642 | 162 | 57 | 3 | 19 | 177 | 4 | 158 | 2.41e-59 | 196 |
Msa0244800 | MtrunA17_Chr7g0261411 | 56.494 | 154 | 61 | 1 | 21 | 174 | 8 | 155 | 1.00e-58 | 192 |
Msa0244800 | MtrunA17_Chr4g0056541 | 57.485 | 167 | 56 | 5 | 18 | 178 | 2 | 159 | 1.29e-58 | 194 |
Msa0244800 | MtrunA17_Chr4g0018391 | 54.878 | 164 | 65 | 3 | 18 | 178 | 2 | 159 | 2.12e-58 | 193 |
Msa0244800 | MtrunA17_Chr4g0047841 | 51.667 | 180 | 66 | 3 | 22 | 180 | 14 | 193 | 1.98e-57 | 191 |
Msa0244800 | MtrunA17_Chr2g0309891 | 59.615 | 156 | 58 | 3 | 23 | 176 | 6 | 158 | 2.00e-57 | 191 |
Msa0244800 | MtrunA17_Chr2g0309331 | 55.346 | 159 | 63 | 3 | 23 | 178 | 10 | 163 | 2.70e-57 | 190 |
Msa0244800 | MtrunA17_Chr7g0252971 | 51.397 | 179 | 78 | 2 | 22 | 191 | 7 | 185 | 5.56e-57 | 189 |
Msa0244800 | MtrunA17_Chr7g0263931 | 55.488 | 164 | 71 | 1 | 14 | 175 | 2 | 165 | 1.22e-56 | 188 |
Msa0244800 | MtrunA17_Chr5g0405211 | 50.000 | 176 | 73 | 4 | 17 | 186 | 2 | 168 | 1.37e-56 | 189 |
Msa0244800 | MtrunA17_Chr5g0398971 | 54.658 | 161 | 66 | 3 | 18 | 175 | 2 | 158 | 1.54e-56 | 188 |
Msa0244800 | MtrunA17_Chr2g0318101 | 54.217 | 166 | 67 | 2 | 22 | 178 | 14 | 179 | 2.95e-56 | 188 |
Msa0244800 | MtrunA17_Chr5g0417791 | 53.797 | 158 | 69 | 2 | 22 | 177 | 2 | 157 | 2.99e-56 | 185 |
Msa0244800 | MtrunA17_Chr8g0346001 | 51.765 | 170 | 70 | 4 | 18 | 177 | 10 | 177 | 3.01e-56 | 190 |
Msa0244800 | MtrunA17_Chr6g0481091 | 49.738 | 191 | 85 | 5 | 23 | 210 | 6 | 188 | 6.79e-56 | 183 |
Msa0244800 | MtrunA17_Chr5g0433781 | 47.273 | 220 | 103 | 4 | 23 | 240 | 6 | 214 | 6.94e-55 | 191 |
Msa0244800 | MtrunA17_Chr4g0042561 | 52.795 | 161 | 72 | 2 | 21 | 179 | 7 | 165 | 1.31e-54 | 181 |
Msa0244800 | MtrunA17_Chr8g0359921 | 55.000 | 160 | 70 | 1 | 19 | 178 | 10 | 167 | 1.92e-54 | 182 |
Msa0244800 | MtrunA17_Chr3g0124761 | 54.938 | 162 | 67 | 3 | 19 | 178 | 3 | 160 | 3.44e-54 | 181 |
Msa0244800 | MtrunA17_Chr2g0326361 | 55.346 | 159 | 69 | 1 | 19 | 175 | 10 | 168 | 4.90e-54 | 181 |
Msa0244800 | MtrunA17_Chr7g0214071 | 51.462 | 171 | 74 | 3 | 18 | 186 | 10 | 173 | 6.07e-54 | 179 |
Msa0244800 | MtrunA17_Chr8g0372121 | 50.000 | 164 | 73 | 3 | 23 | 183 | 6 | 163 | 4.51e-53 | 178 |
Msa0244800 | MtrunA17_Chr8g0361731 | 37.363 | 273 | 119 | 4 | 25 | 278 | 16 | 255 | 8.47e-53 | 180 |
Msa0244800 | MtrunA17_Chr2g0318081 | 54.321 | 162 | 62 | 3 | 23 | 180 | 16 | 169 | 9.86e-53 | 179 |
Msa0244800 | MtrunA17_Chr5g0400461 | 34.659 | 352 | 168 | 11 | 21 | 347 | 4 | 318 | 1.70e-52 | 177 |
Msa0244800 | MtrunA17_Chr3g0109821 | 57.692 | 156 | 61 | 4 | 23 | 176 | 6 | 158 | 2.47e-52 | 184 |
Msa0244800 | MtrunA17_Chr6g0453131 | 51.515 | 165 | 68 | 3 | 23 | 178 | 15 | 176 | 2.83e-51 | 176 |
Msa0244800 | MtrunA17_Chr8g0384721 | 54.140 | 157 | 63 | 3 | 23 | 175 | 7 | 158 | 2.89e-51 | 173 |
Msa0244800 | MtrunA17_Chr1g0200561 | 50.314 | 159 | 64 | 4 | 23 | 175 | 19 | 168 | 8.93e-51 | 173 |
Msa0244800 | MtrunA17_Chr3g0130731 | 52.532 | 158 | 71 | 2 | 20 | 176 | 4 | 158 | 2.25e-50 | 171 |
Msa0244800 | MtrunA17_Chr3g0113001 | 53.846 | 169 | 58 | 4 | 72 | 239 | 14 | 163 | 3.31e-50 | 171 |
Msa0244800 | MtrunA17_Chr5g0417001 | 48.485 | 165 | 79 | 2 | 20 | 178 | 11 | 175 | 5.12e-50 | 172 |
Msa0244800 | MtrunA17_Chr3g0130101 | 53.165 | 158 | 66 | 4 | 25 | 179 | 9 | 161 | 6.10e-48 | 166 |
Msa0244800 | MtrunA17_Chr4g0054791 | 41.975 | 243 | 109 | 9 | 21 | 239 | 4 | 238 | 1.49e-47 | 164 |
Msa0244800 | MtrunA17_Chr4g0076731 | 51.316 | 152 | 69 | 2 | 25 | 176 | 56 | 202 | 6.60e-47 | 165 |
Msa0244800 | MtrunA17_Chr5g0442771 | 39.815 | 216 | 119 | 4 | 11 | 218 | 6 | 218 | 3.70e-46 | 160 |
Msa0244800 | MtrunA17_Chr1g0201021 | 51.266 | 158 | 69 | 4 | 25 | 179 | 21 | 173 | 8.39e-46 | 165 |
Msa0244800 | MtrunA17_Chr5g0428991 | 46.632 | 193 | 80 | 5 | 23 | 201 | 25 | 208 | 1.39e-45 | 165 |
Msa0244800 | MtrunA17_Chr3g0092671 | 51.875 | 160 | 65 | 5 | 25 | 179 | 7 | 159 | 1.62e-45 | 164 |
Msa0244800 | MtrunA17_Chr3g0128151 | 46.154 | 195 | 82 | 5 | 23 | 203 | 22 | 207 | 4.74e-45 | 163 |
Msa0244800 | MtrunA17_Chr1g0197361 | 49.375 | 160 | 69 | 5 | 25 | 179 | 10 | 162 | 3.20e-44 | 161 |
Msa0244800 | MtrunA17_Chr1g0197351 | 50.920 | 163 | 72 | 3 | 23 | 179 | 42 | 202 | 3.40e-44 | 159 |
Msa0244800 | MtrunA17_Chr8g0364791 | 48.750 | 160 | 74 | 4 | 23 | 179 | 6 | 160 | 7.43e-44 | 157 |
Msa0244800 | MtrunA17_Chr3g0128111 | 47.159 | 176 | 70 | 5 | 26 | 187 | 45 | 211 | 4.44e-43 | 150 |
Msa0244800 | MtrunA17_Chr8g0384201 | 47.799 | 159 | 77 | 3 | 23 | 179 | 6 | 160 | 7.46e-43 | 155 |
Msa0244800 | MtrunA17_Chr2g0311651 | 50.694 | 144 | 67 | 3 | 11 | 150 | 9 | 152 | 1.75e-40 | 145 |
Msa0244800 | MtrunA17_Chr3g0113031 | 50.633 | 158 | 57 | 5 | 84 | 239 | 1 | 139 | 4.56e-40 | 143 |
Msa0244800 | MtrunA17_Chr2g0311661 | 52.206 | 136 | 61 | 3 | 19 | 150 | 16 | 151 | 9.30e-40 | 143 |
Msa0244800 | MtrunA17_Chr4g0038751 | 51.969 | 127 | 60 | 1 | 25 | 150 | 17 | 143 | 2.69e-39 | 142 |
Msa0244800 | MtrunA17_Chr8g0385991 | 41.818 | 165 | 91 | 2 | 18 | 179 | 9 | 171 | 6.04e-39 | 139 |
Msa0244800 | MtrunA17_Chr8g0345671 | 52.482 | 141 | 61 | 4 | 11 | 148 | 1 | 138 | 1.87e-37 | 139 |
Msa0244800 | MtrunA17_Chr3g0131911 | 43.023 | 172 | 88 | 5 | 18 | 181 | 9 | 178 | 1.13e-35 | 130 |
Msa0244800 | MtrunA17_Chr8g0345691 | 50.000 | 130 | 61 | 3 | 22 | 148 | 11 | 139 | 1.97e-34 | 131 |
Msa0244800 | MtrunA17_Chr4g0026141 | 46.970 | 132 | 64 | 3 | 23 | 149 | 5 | 135 | 2.03e-33 | 125 |
Msa0244800 | MtrunA17_Chr2g0321631 | 44.697 | 132 | 66 | 3 | 24 | 149 | 5 | 135 | 1.07e-31 | 120 |
Msa0244800 | MtrunA17_Chr2g0321741 | 45.652 | 138 | 61 | 4 | 42 | 178 | 11 | 135 | 3.21e-31 | 121 |
Msa0244800 | MtrunA17_Chr8g0345711 | 46.512 | 129 | 65 | 3 | 23 | 148 | 12 | 139 | 5.25e-31 | 116 |
Msa0244800 | MtrunA17_Chr7g0266701 | 39.024 | 164 | 90 | 6 | 23 | 177 | 4 | 166 | 1.49e-28 | 112 |
Msa0244800 | MtrunA17_Chr8g0345701 | 44.056 | 143 | 60 | 5 | 23 | 148 | 7 | 146 | 2.09e-28 | 109 |
Msa0244800 | MtrunA17_Chr8g0345731 | 45.038 | 131 | 67 | 4 | 23 | 148 | 24 | 154 | 3.20e-28 | 108 |
Msa0244800 | MtrunA17_Chr4g0050701 | 35.329 | 167 | 93 | 3 | 23 | 182 | 11 | 169 | 3.81e-28 | 109 |
Msa0244800 | MtrunA17_Chr8g0345721 | 38.065 | 155 | 63 | 3 | 26 | 148 | 38 | 191 | 3.60e-25 | 101 |
Msa0244800 | MtrunA17_Chr7g0243371 | 56.000 | 75 | 33 | 0 | 76 | 150 | 17 | 91 | 3.22e-24 | 96.3 |
Msa0244800 | MtrunA17_Chr8g0345741 | 40.678 | 118 | 66 | 3 | 34 | 148 | 2 | 118 | 3.94e-22 | 91.7 |
Msa0244800 | MtrunA17_Chr8g0384351 | 37.267 | 161 | 69 | 6 | 19 | 175 | 6 | 138 | 1.24e-20 | 88.6 |
Msa0244800 | MtrunA17_Chr3g0113011 | 60.000 | 60 | 24 | 0 | 10 | 69 | 6 | 65 | 2.82e-19 | 81.3 |
Msa0244800 | MtrunA17_Chr3g0130321 | 35.583 | 163 | 85 | 7 | 23 | 174 | 7 | 160 | 7.68e-19 | 84.3 |
Msa0244800 | MtrunA17_Chr7g0251661 | 33.835 | 133 | 82 | 5 | 18 | 148 | 5 | 133 | 1.13e-18 | 82.4 |
Msa0244800 | MtrunA17_Chr3g0113041 | 54.839 | 62 | 28 | 0 | 8 | 69 | 4 | 65 | 2.41e-17 | 75.9 |
Msa0244800 | MtrunA17_Chr7g0251671 | 32.624 | 141 | 85 | 5 | 18 | 154 | 5 | 139 | 1.28e-16 | 76.6 |
Msa0244800 | MtrunA17_Chr7g0251651 | 34.375 | 128 | 78 | 5 | 23 | 148 | 18 | 141 | 2.11e-16 | 77.0 |
Msa0244800 | MtrunA17_Chr4g0040541 | 32.877 | 146 | 76 | 6 | 23 | 150 | 48 | 189 | 3.05e-12 | 66.6 |
Msa0244800 | MtrunA17_Chr2g0282871 | 29.412 | 204 | 114 | 10 | 23 | 207 | 53 | 245 | 9.11e-12 | 65.5 |
Msa0244800 | MtrunA17_Chr8g0367761 | 31.944 | 144 | 79 | 5 | 23 | 150 | 68 | 208 | 6.24e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244800 | AT5G53950.1 | 51.106 | 407 | 137 | 12 | 4 | 384 | 5 | 375 | 4.79e-120 | 353 |
Msa0244800 | AT3G15170.1 | 77.914 | 163 | 36 | 0 | 23 | 185 | 20 | 182 | 1.26e-91 | 278 |
Msa0244800 | AT5G61430.1 | 61.633 | 245 | 65 | 6 | 23 | 265 | 16 | 233 | 1.07e-90 | 276 |
Msa0244800 | AT5G07680.1 | 48.457 | 324 | 113 | 6 | 1 | 324 | 1 | 270 | 2.02e-90 | 275 |
Msa0244800 | AT5G07680.2 | 50.662 | 302 | 101 | 5 | 23 | 324 | 3 | 256 | 1.52e-89 | 273 |
Msa0244800 | AT5G18270.2 | 61.353 | 207 | 68 | 3 | 23 | 229 | 21 | 215 | 6.24e-84 | 259 |
Msa0244800 | AT5G18270.1 | 60.870 | 207 | 69 | 3 | 23 | 229 | 21 | 215 | 9.20e-84 | 259 |
Msa0244800 | AT3G29035.1 | 55.894 | 263 | 67 | 7 | 23 | 274 | 24 | 248 | 4.24e-83 | 256 |
Msa0244800 | AT5G39610.1 | 76.433 | 157 | 35 | 1 | 23 | 179 | 20 | 174 | 5.60e-82 | 252 |
Msa0244800 | AT2G24430.2 | 69.277 | 166 | 46 | 2 | 12 | 176 | 5 | 166 | 2.15e-80 | 249 |
Msa0244800 | AT2G24430.1 | 69.277 | 166 | 46 | 2 | 12 | 176 | 5 | 166 | 2.15e-80 | 249 |
Msa0244800 | AT3G04060.1 | 58.605 | 215 | 72 | 4 | 13 | 227 | 10 | 207 | 3.36e-79 | 247 |
Msa0244800 | AT3G18400.1 | 52.191 | 251 | 85 | 4 | 20 | 270 | 2 | 217 | 4.85e-79 | 246 |
Msa0244800 | AT1G76420.1 | 52.361 | 233 | 102 | 2 | 23 | 255 | 22 | 245 | 5.40e-77 | 241 |
Msa0244800 | AT3G12977.1 | 54.444 | 180 | 77 | 3 | 12 | 190 | 7 | 182 | 9.91e-67 | 213 |
Msa0244800 | AT1G56010.2 | 44.615 | 260 | 106 | 8 | 11 | 267 | 7 | 231 | 2.50e-62 | 203 |
Msa0244800 | AT4G10350.1 | 51.256 | 199 | 78 | 5 | 19 | 210 | 5 | 191 | 2.08e-60 | 199 |
Msa0244800 | AT5G61430.2 | 62.651 | 166 | 40 | 4 | 72 | 237 | 2 | 145 | 4.83e-59 | 193 |
Msa0244800 | AT1G12260.1 | 56.522 | 161 | 61 | 3 | 18 | 175 | 2 | 156 | 4.29e-58 | 194 |
Msa0244800 | AT1G12260.2 | 56.522 | 161 | 61 | 3 | 18 | 175 | 2 | 156 | 4.76e-58 | 192 |
Msa0244800 | AT1G33280.1 | 55.556 | 162 | 62 | 3 | 19 | 177 | 4 | 158 | 7.11e-58 | 191 |
Msa0244800 | AT2G46770.1 | 47.549 | 204 | 89 | 5 | 18 | 205 | 11 | 212 | 1.13e-57 | 192 |
Msa0244800 | AT4G28530.1 | 44.444 | 225 | 91 | 4 | 23 | 231 | 10 | 216 | 4.65e-57 | 190 |
Msa0244800 | AT1G62700.1 | 56.098 | 164 | 57 | 4 | 18 | 175 | 2 | 156 | 1.80e-56 | 190 |
Msa0244800 | AT1G62700.2 | 56.098 | 164 | 57 | 4 | 18 | 175 | 2 | 156 | 1.80e-56 | 190 |
Msa0244800 | AT2G18060.3 | 50.877 | 171 | 75 | 3 | 23 | 190 | 9 | 173 | 2.17e-56 | 189 |
Msa0244800 | AT2G18060.1 | 50.877 | 171 | 75 | 3 | 23 | 190 | 9 | 173 | 2.17e-56 | 189 |
Msa0244800 | AT3G04070.2 | 51.705 | 176 | 77 | 2 | 23 | 190 | 10 | 185 | 3.89e-56 | 187 |
Msa0244800 | AT5G62380.2 | 47.087 | 206 | 91 | 5 | 21 | 217 | 5 | 201 | 9.44e-56 | 187 |
Msa0244800 | AT5G62380.1 | 47.087 | 206 | 91 | 5 | 21 | 217 | 5 | 201 | 9.44e-56 | 187 |
Msa0244800 | AT3G04070.1 | 50.000 | 192 | 72 | 3 | 23 | 190 | 10 | 201 | 1.04e-55 | 187 |
Msa0244800 | AT1G65910.1 | 51.832 | 191 | 81 | 5 | 23 | 211 | 6 | 187 | 6.60e-55 | 191 |
Msa0244800 | AT1G79580.3 | 56.024 | 166 | 56 | 5 | 23 | 181 | 17 | 172 | 1.10e-54 | 184 |
Msa0244800 | AT1G79580.5 | 56.024 | 166 | 56 | 5 | 23 | 181 | 17 | 172 | 1.10e-54 | 184 |
Msa0244800 | AT1G79580.4 | 56.024 | 166 | 56 | 5 | 23 | 181 | 17 | 172 | 1.10e-54 | 184 |
Msa0244800 | AT1G79580.2 | 56.024 | 166 | 56 | 5 | 23 | 181 | 17 | 172 | 1.10e-54 | 184 |
Msa0244800 | AT1G79580.1 | 56.024 | 166 | 56 | 5 | 23 | 181 | 17 | 172 | 1.10e-54 | 184 |
Msa0244800 | AT5G08790.1 | 55.422 | 166 | 64 | 3 | 18 | 178 | 2 | 162 | 1.16e-54 | 182 |
Msa0244800 | AT3G61910.1 | 47.753 | 178 | 77 | 4 | 14 | 177 | 2 | 177 | 1.40e-54 | 183 |
Msa0244800 | AT1G61110.1 | 50.562 | 178 | 77 | 4 | 11 | 178 | 4 | 180 | 2.71e-54 | 182 |
Msa0244800 | AT5G66300.1 | 54.375 | 160 | 63 | 4 | 23 | 178 | 12 | 165 | 3.40e-54 | 181 |
Msa0244800 | AT1G01720.1 | 47.739 | 199 | 95 | 3 | 22 | 218 | 6 | 197 | 7.73e-54 | 180 |
Msa0244800 | AT4G36160.1 | 50.581 | 172 | 75 | 4 | 23 | 190 | 10 | 175 | 8.69e-54 | 182 |
Msa0244800 | AT4G36160.3 | 50.581 | 172 | 75 | 4 | 23 | 190 | 10 | 175 | 8.69e-54 | 182 |
Msa0244800 | AT4G36160.2 | 50.581 | 172 | 75 | 4 | 23 | 190 | 14 | 179 | 1.09e-53 | 182 |
Msa0244800 | AT1G71930.2 | 51.923 | 156 | 66 | 3 | 23 | 175 | 9 | 158 | 1.36e-53 | 180 |
Msa0244800 | AT1G71930.1 | 51.923 | 156 | 66 | 3 | 23 | 175 | 9 | 158 | 1.36e-53 | 180 |
Msa0244800 | AT3G17730.1 | 54.839 | 155 | 64 | 3 | 23 | 175 | 6 | 156 | 1.45e-53 | 178 |
Msa0244800 | AT1G69490.1 | 46.970 | 198 | 89 | 5 | 19 | 207 | 5 | 195 | 2.09e-53 | 178 |
Msa0244800 | AT4G27410.2 | 52.381 | 168 | 75 | 3 | 23 | 190 | 14 | 176 | 2.36e-53 | 179 |
Msa0244800 | AT5G63790.2 | 54.545 | 165 | 65 | 3 | 19 | 178 | 56 | 215 | 2.95e-53 | 179 |
Msa0244800 | AT5G63790.1 | 54.545 | 165 | 65 | 3 | 19 | 178 | 46 | 205 | 3.49e-53 | 179 |
Msa0244800 | AT3G03200.1 | 57.419 | 155 | 61 | 3 | 23 | 175 | 6 | 157 | 1.21e-52 | 182 |
Msa0244800 | AT1G77450.1 | 50.000 | 180 | 76 | 4 | 19 | 188 | 6 | 181 | 1.22e-52 | 176 |
Msa0244800 | AT5G39820.1 | 47.619 | 189 | 77 | 3 | 11 | 177 | 5 | 193 | 1.39e-52 | 178 |
Msa0244800 | AT5G04410.1 | 54.717 | 159 | 66 | 3 | 23 | 179 | 9 | 163 | 1.74e-52 | 183 |
Msa0244800 | AT1G54330.1 | 59.355 | 155 | 54 | 3 | 23 | 175 | 6 | 153 | 1.77e-52 | 177 |
Msa0244800 | AT3G15500.1 | 52.326 | 172 | 72 | 3 | 23 | 191 | 14 | 178 | 1.78e-52 | 177 |
Msa0244800 | AT3G10500.1 | 53.374 | 163 | 62 | 4 | 23 | 179 | 9 | 163 | 2.54e-52 | 182 |
Msa0244800 | AT1G32770.1 | 50.581 | 172 | 70 | 4 | 18 | 177 | 11 | 179 | 2.93e-52 | 178 |
Msa0244800 | AT5G46590.1 | 55.484 | 155 | 65 | 3 | 23 | 175 | 6 | 158 | 6.08e-52 | 175 |
Msa0244800 | AT5G46590.2 | 60.769 | 130 | 48 | 2 | 23 | 150 | 6 | 134 | 7.47e-52 | 174 |
Msa0244800 | AT1G52890.1 | 54.717 | 159 | 62 | 3 | 23 | 178 | 14 | 165 | 1.30e-51 | 175 |
Msa0244800 | AT1G26870.1 | 48.851 | 174 | 82 | 1 | 12 | 178 | 5 | 178 | 3.46e-51 | 177 |
Msa0244800 | AT3G15510.1 | 52.795 | 161 | 67 | 3 | 27 | 178 | 21 | 181 | 6.42e-51 | 174 |
Msa0244800 | AT5G17260.1 | 56.129 | 155 | 63 | 3 | 23 | 175 | 6 | 157 | 7.19e-51 | 177 |
Msa0244800 | AT3G10480.1 | 55.901 | 161 | 62 | 4 | 23 | 179 | 27 | 182 | 2.13e-50 | 175 |
Msa0244800 | AT3G10490.1 | 54.088 | 159 | 68 | 3 | 23 | 179 | 27 | 182 | 4.80e-50 | 168 |
Msa0244800 | AT3G10480.2 | 56.250 | 160 | 62 | 4 | 23 | 179 | 27 | 181 | 5.02e-50 | 174 |
Msa0244800 | AT4G27410.3 | 47.568 | 185 | 75 | 4 | 23 | 190 | 14 | 193 | 4.90e-49 | 168 |
Msa0244800 | AT4G17980.1 | 52.258 | 155 | 72 | 1 | 23 | 175 | 6 | 160 | 5.08e-49 | 167 |
Msa0244800 | AT4G17980.2 | 52.258 | 155 | 72 | 1 | 23 | 175 | 6 | 160 | 6.00e-49 | 167 |
Msa0244800 | AT4G35580.1 | 47.368 | 209 | 88 | 6 | 23 | 223 | 9 | 203 | 9.95e-49 | 172 |
Msa0244800 | AT4G35580.3 | 47.368 | 209 | 88 | 6 | 23 | 223 | 9 | 203 | 1.28e-48 | 172 |
Msa0244800 | AT4G35580.2 | 47.368 | 209 | 88 | 6 | 23 | 223 | 9 | 203 | 1.43e-48 | 172 |
Msa0244800 | AT5G13180.1 | 48.466 | 163 | 78 | 2 | 18 | 180 | 9 | 165 | 2.36e-48 | 164 |
Msa0244800 | AT3G10490.2 | 54.088 | 159 | 68 | 3 | 23 | 179 | 27 | 182 | 2.92e-48 | 170 |
Msa0244800 | AT1G33060.2 | 60.150 | 133 | 49 | 2 | 23 | 153 | 24 | 154 | 4.49e-48 | 173 |
Msa0244800 | AT1G33060.1 | 60.150 | 133 | 49 | 2 | 23 | 153 | 24 | 154 | 4.80e-48 | 173 |
Msa0244800 | AT1G52880.1 | 51.875 | 160 | 69 | 2 | 27 | 178 | 21 | 180 | 1.41e-47 | 164 |
Msa0244800 | AT2G02450.1 | 52.980 | 151 | 66 | 2 | 25 | 175 | 53 | 198 | 1.81e-47 | 166 |
Msa0244800 | AT2G02450.2 | 52.980 | 151 | 66 | 2 | 25 | 175 | 53 | 198 | 2.33e-47 | 166 |
Msa0244800 | AT5G24590.2 | 47.486 | 179 | 79 | 4 | 11 | 182 | 1 | 171 | 9.03e-47 | 166 |
Msa0244800 | AT2G33480.1 | 49.398 | 166 | 77 | 3 | 17 | 182 | 9 | 167 | 4.36e-46 | 159 |
Msa0244800 | AT2G33480.2 | 49.398 | 166 | 75 | 3 | 17 | 182 | 9 | 165 | 7.39e-46 | 158 |
Msa0244800 | AT3G10480.3 | 46.907 | 194 | 61 | 4 | 23 | 179 | 27 | 215 | 9.54e-46 | 164 |
Msa0244800 | AT2G43000.1 | 37.500 | 224 | 121 | 5 | 25 | 240 | 20 | 232 | 2.00e-45 | 157 |
Msa0244800 | AT1G34180.3 | 48.734 | 158 | 73 | 4 | 25 | 179 | 18 | 170 | 4.67e-45 | 161 |
Msa0244800 | AT1G32870.2 | 52.830 | 159 | 69 | 3 | 23 | 179 | 10 | 164 | 4.86e-45 | 162 |
Msa0244800 | AT1G32870.1 | 52.830 | 159 | 69 | 3 | 23 | 179 | 10 | 164 | 4.90e-45 | 162 |
Msa0244800 | AT3G49530.2 | 53.901 | 141 | 62 | 2 | 11 | 149 | 1 | 140 | 8.98e-45 | 159 |
Msa0244800 | AT1G32870.3 | 52.830 | 159 | 69 | 3 | 23 | 179 | 46 | 200 | 1.45e-44 | 162 |
Msa0244800 | AT3G49530.1 | 53.901 | 141 | 62 | 2 | 11 | 149 | 1 | 140 | 1.66e-44 | 160 |
Msa0244800 | AT1G34190.1 | 48.734 | 158 | 73 | 4 | 25 | 179 | 18 | 170 | 1.84e-44 | 162 |
Msa0244800 | AT1G34180.1 | 48.734 | 158 | 73 | 4 | 25 | 179 | 18 | 170 | 1.85e-44 | 162 |
Msa0244800 | AT5G64060.1 | 45.342 | 161 | 80 | 4 | 22 | 179 | 5 | 160 | 1.61e-43 | 155 |
Msa0244800 | AT1G34180.4 | 45.294 | 170 | 73 | 4 | 25 | 179 | 18 | 182 | 2.97e-43 | 156 |
Msa0244800 | AT5G09330.5 | 45.625 | 160 | 81 | 3 | 22 | 179 | 5 | 160 | 3.34e-43 | 157 |
Msa0244800 | AT5G09330.2 | 45.625 | 160 | 81 | 3 | 22 | 179 | 5 | 160 | 3.34e-43 | 157 |
Msa0244800 | AT5G09330.4 | 45.625 | 160 | 81 | 3 | 22 | 179 | 5 | 160 | 3.34e-43 | 157 |
Msa0244800 | AT5G09330.3 | 45.625 | 160 | 81 | 3 | 22 | 179 | 5 | 160 | 3.34e-43 | 157 |
Msa0244800 | AT5G09330.1 | 45.625 | 160 | 81 | 3 | 22 | 179 | 5 | 160 | 3.34e-43 | 157 |
Msa0244800 | AT1G34180.2 | 45.294 | 170 | 73 | 4 | 25 | 179 | 18 | 182 | 1.00e-42 | 157 |
Msa0244800 | AT1G32510.1 | 42.079 | 202 | 89 | 5 | 23 | 211 | 6 | 192 | 2.44e-42 | 150 |
Msa0244800 | AT3G12977.2 | 59.016 | 122 | 45 | 3 | 70 | 190 | 12 | 129 | 3.56e-42 | 147 |
Msa0244800 | AT2G27300.1 | 52.672 | 131 | 59 | 2 | 23 | 152 | 14 | 142 | 1.37e-41 | 149 |
Msa0244800 | AT2G17040.1 | 52.756 | 127 | 59 | 1 | 25 | 150 | 8 | 134 | 6.98e-41 | 145 |
Msa0244800 | AT1G56010.1 | 43.434 | 198 | 75 | 7 | 72 | 267 | 2 | 164 | 6.42e-40 | 142 |
Msa0244800 | AT3G12910.1 | 48.592 | 142 | 69 | 3 | 12 | 150 | 10 | 150 | 1.03e-38 | 140 |
Msa0244800 | AT5G22290.1 | 38.251 | 183 | 102 | 3 | 25 | 206 | 23 | 195 | 6.11e-38 | 139 |
Msa0244800 | AT4G10350.2 | 48.667 | 150 | 58 | 5 | 68 | 210 | 7 | 144 | 9.86e-37 | 135 |
Msa0244800 | AT4G28530.2 | 50.000 | 128 | 48 | 1 | 23 | 134 | 10 | 137 | 2.56e-36 | 135 |
Msa0244800 | AT3G44290.2 | 43.478 | 161 | 78 | 4 | 25 | 184 | 16 | 164 | 2.96e-36 | 132 |
Msa0244800 | AT3G44290.1 | 43.478 | 161 | 78 | 4 | 25 | 184 | 16 | 164 | 1.81e-35 | 133 |
Msa0244800 | AT5G04395.1 | 45.638 | 149 | 67 | 2 | 16 | 150 | 21 | 169 | 3.09e-35 | 128 |
Msa0244800 | AT2G33480.3 | 50.467 | 107 | 49 | 2 | 76 | 182 | 8 | 110 | 7.43e-27 | 106 |
Msa0244800 | AT5G64530.2 | 41.406 | 128 | 63 | 2 | 23 | 150 | 3 | 118 | 7.04e-26 | 102 |
Msa0244800 | AT4G01550.1 | 38.994 | 159 | 86 | 5 | 26 | 180 | 7 | 158 | 9.70e-26 | 108 |
Msa0244800 | AT5G64530.1 | 35.758 | 165 | 82 | 3 | 23 | 175 | 3 | 155 | 2.02e-25 | 102 |
Msa0244800 | AT3G04420.2 | 41.860 | 129 | 69 | 3 | 24 | 148 | 4 | 130 | 2.36e-25 | 104 |
Msa0244800 | AT3G04420.1 | 41.860 | 129 | 69 | 3 | 24 | 148 | 4 | 130 | 5.32e-25 | 104 |
Msa0244800 | AT1G02230.1 | 38.028 | 142 | 80 | 4 | 24 | 160 | 4 | 142 | 9.49e-25 | 104 |
Msa0244800 | AT4G01520.1 | 40.152 | 132 | 74 | 4 | 24 | 150 | 5 | 136 | 5.22e-24 | 101 |
Msa0244800 | AT3G44350.2 | 34.568 | 162 | 99 | 4 | 22 | 178 | 4 | 163 | 1.15e-23 | 99.0 |
Msa0244800 | AT5G22380.1 | 40.310 | 129 | 70 | 3 | 26 | 148 | 8 | 135 | 1.54e-23 | 98.2 |
Msa0244800 | AT3G44350.1 | 38.346 | 133 | 76 | 3 | 22 | 149 | 4 | 135 | 2.75e-23 | 95.5 |
Msa0244800 | AT4G01540.3 | 40.769 | 130 | 72 | 4 | 26 | 150 | 7 | 136 | 5.69e-23 | 100 |
Msa0244800 | AT4G01540.4 | 40.769 | 130 | 72 | 4 | 26 | 150 | 7 | 136 | 5.87e-23 | 99.8 |
Msa0244800 | AT4G01540.2 | 40.769 | 130 | 72 | 4 | 26 | 150 | 7 | 136 | 1.28e-22 | 99.0 |
Msa0244800 | AT4G01540.1 | 40.769 | 130 | 72 | 4 | 26 | 150 | 7 | 136 | 1.35e-22 | 99.4 |
Msa0244800 | AT1G02250.1 | 39.231 | 130 | 71 | 4 | 24 | 148 | 4 | 130 | 2.85e-22 | 97.4 |
Msa0244800 | AT3G10490.4 | 55.952 | 84 | 34 | 2 | 96 | 179 | 2 | 82 | 4.24e-21 | 94.0 |
Msa0244800 | AT3G10490.3 | 55.952 | 84 | 34 | 2 | 96 | 179 | 2 | 82 | 4.24e-21 | 94.0 |
Msa0244800 | AT2G18060.2 | 49.462 | 93 | 35 | 4 | 101 | 190 | 2 | 85 | 1.49e-20 | 90.9 |
Msa0244800 | AT1G02220.1 | 39.535 | 129 | 69 | 4 | 24 | 148 | 4 | 127 | 1.57e-20 | 92.8 |
Msa0244800 | AT2G43000.2 | 33.803 | 142 | 83 | 4 | 84 | 217 | 1 | 139 | 3.86e-18 | 82.4 |
Msa0244800 | AT1G01010.1 | 35.152 | 165 | 88 | 7 | 26 | 180 | 6 | 161 | 1.05e-17 | 84.7 |
Msa0244800 | AT5G14000.1 | 33.537 | 164 | 96 | 5 | 18 | 178 | 10 | 163 | 5.07e-17 | 79.3 |
Msa0244800 | AT5G14000.2 | 36.232 | 138 | 80 | 4 | 18 | 152 | 10 | 142 | 5.25e-16 | 75.1 |
Msa0244800 | AT5G50820.1 | 34.483 | 145 | 67 | 6 | 17 | 150 | 11 | 138 | 3.95e-15 | 73.9 |
Msa0244800 | AT5G22290.2 | 36.190 | 105 | 57 | 2 | 102 | 206 | 2 | 96 | 2.59e-14 | 72.4 |
Msa0244800 | AT1G28470.1 | 34.054 | 185 | 92 | 10 | 8 | 173 | 61 | 234 | 7.04e-14 | 72.4 |
Msa0244800 | AT3G56530.1 | 32.576 | 132 | 84 | 3 | 23 | 151 | 52 | 181 | 1.25e-13 | 71.6 |
Msa0244800 | AT3G04430.1 | 33.835 | 133 | 74 | 5 | 29 | 149 | 6 | 136 | 1.34e-12 | 66.6 |
Msa0244800 | AT3G01600.1 | 34.000 | 150 | 77 | 6 | 23 | 153 | 55 | 201 | 1.60e-11 | 65.5 |
Find 87 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTGAGTTTGAGGCTATTT+TGG | 0.142515 | 2_2:+23582430 | None:intergenic |
GACTGCATGTGGAACTATTA+AGG | 0.264534 | 2_2:-23581882 | None:intergenic |
GAGCAACAGAAGCTGGTTAT+TGG | 0.282927 | 2_2:-23583342 | Msa0244800:CDS |
CTTTAGATCAGTGTTGTTGC+TGG | 0.285167 | 2_2:+23582268 | None:intergenic |
GGTCTTAGCATTGGAGGATT+AGG | 0.299647 | 2_2:-23581918 | Msa0244800:CDS |
GTGGTGATATTCTTGGTGGC+TGG | 0.323001 | 2_2:-23581986 | Msa0244800:CDS |
AAGACTCATGCTGTTGTTGC+TGG | 0.361273 | 2_2:+23582409 | None:intergenic |
GGTGGTGGTGGTGATATTCT+TGG | 0.370018 | 2_2:-23581993 | Msa0244800:CDS |
GCTGGTTATTGGAAAGCAAC+TGG | 0.387538 | 2_2:-23583331 | Msa0244800:CDS |
CAAAAGAGTAACACTGGAAA+TGG | 0.388031 | 2_2:-23582497 | Msa0244800:CDS |
TGGTGATATTCTTGGTGGCT+GGG | 0.390544 | 2_2:-23581985 | Msa0244800:CDS |
TTGAATTCATGAAGGATGAA+TGG | 0.403950 | 2_2:-23582538 | Msa0244800:intron |
TTTAACAGAGAAAGCTAAGA+TGG | 0.415039 | 2_2:-23583431 | Msa0244800:intron |
CTGTTGAAGTTGTTATGAAC+AGG | 0.422669 | 2_2:+23582197 | None:intergenic |
AGGCTGCGCCGCAGCCGCCG+AGG | 0.437536 | 2_2:+23582028 | None:intergenic |
GGTGATATTCTTGGTGGCTG+GGG | 0.437635 | 2_2:-23581984 | Msa0244800:CDS |
TTTCCCGGTGGTGGTGGTGG+TGG | 0.440456 | 2_2:-23582005 | Msa0244800:CDS |
CCACCACCACCACCGGGAAA+AGG | 0.440619 | 2_2:+23582008 | None:intergenic |
GAAGAAGGTGAACTTGGTTC+AGG | 0.444043 | 2_2:+23582383 | None:intergenic |
ACCTTCAATGACTGCAACAA+TGG | 0.444390 | 2_2:-23582144 | Msa0244800:CDS |
GTGGTGGTTGACAGTGGTGG+TGG | 0.451556 | 2_2:-23581939 | Msa0244800:CDS |
GGATGCCGGCGGAGGAGCAA+AGG | 0.452173 | 2_2:-23581962 | Msa0244800:CDS |
GTGGTGCTAGCGGCAGTGTA+AGG | 0.457152 | 2_2:+23582329 | None:intergenic |
TGTTCATGTGATGGTGGTAA+TGG | 0.458137 | 2_2:+23583719 | None:intergenic |
TGTAGATGTTGTGGAGAAAC+AGG | 0.459674 | 2_2:+23582235 | None:intergenic |
TGAATTCATGAAGGATGAAT+GGG | 0.460212 | 2_2:-23582537 | Msa0244800:intron |
GGCGGAGGAGCAAAGGGTGG+TGG | 0.469260 | 2_2:-23581955 | Msa0244800:CDS |
GCTAGGTTTCAGAGGAATGT+TGG | 0.470321 | 2_2:-23582113 | Msa0244800:CDS |
TACTGTTGTTGTTCATGTGA+TGG | 0.472131 | 2_2:+23583710 | None:intergenic |
TCCATTGTTGCAGTCATTGA+AGG | 0.473861 | 2_2:+23582143 | None:intergenic |
GTTGTTGCTGGCTGAGTTTG+AGG | 0.477482 | 2_2:+23582421 | None:intergenic |
CGTGATAGAAAGTATCCAAC+TGG | 0.482620 | 2_2:-23583379 | Msa0244800:CDS |
GATGCCGGCGGAGGAGCAAA+GGG | 0.483796 | 2_2:-23581961 | Msa0244800:CDS |
TAAACTGAAGAAGGTGAACT+TGG | 0.484767 | 2_2:+23582377 | None:intergenic |
CTCTTCCTCTATAGAAAACA+AGG | 0.487943 | 2_2:+23583251 | None:intergenic |
TTCCTCTGAAACCTAGCAAA+AGG | 0.489285 | 2_2:+23582119 | None:intergenic |
ACCACTTGTGGTGGCTGTCA+CGG | 0.492729 | 2_2:+23582466 | None:intergenic |
CAGCAACAACACTGATCTAA+AGG | 0.495202 | 2_2:-23582267 | Msa0244800:CDS |
ATGCATGAATACCGTCTTGA+AGG | 0.495598 | 2_2:-23583199 | Msa0244800:CDS |
GGTGGTGGTCTTAGCATTGG+AGG | 0.500448 | 2_2:-23581924 | Msa0244800:CDS |
GGTGGAAGATAAACTGAAGA+AGG | 0.500960 | 2_2:+23582368 | None:intergenic |
CTTCTGAGCTTGACTGCATG+TGG | 0.509536 | 2_2:-23581893 | Msa0244800:CDS |
GTGATATTCTTGGTGGCTGG+GGG | 0.509670 | 2_2:-23581983 | Msa0244800:CDS |
GGAGATGAATCAAGAAGAGG+TGG | 0.516437 | 2_2:+23582350 | None:intergenic |
ACAAATAGAGCAACAGAAGC+TGG | 0.519833 | 2_2:-23583349 | Msa0244800:CDS |
GTTGAGATCAACTTCAGCTA+TGG | 0.539738 | 2_2:+23583573 | None:intergenic |
GTGATGAGTTCTTCATCAGT+TGG | 0.540059 | 2_2:+23583643 | None:intergenic |
ACCACCCTTTGCTCCTCCGC+CGG | 0.540834 | 2_2:+23581957 | None:intergenic |
GGTGGTGGTGATATTCTTGG+TGG | 0.546301 | 2_2:-23581990 | Msa0244800:CDS |
AGTGGTGGTGGTCTTAGCAT+TGG | 0.549411 | 2_2:-23581927 | Msa0244800:CDS |
ATTTGATGTTGTAGATGTTG+TGG | 0.550821 | 2_2:+23582226 | None:intergenic |
TGATGAGTTCTTCATCAGTT+GGG | 0.552779 | 2_2:+23583644 | None:intergenic |
TCTTGTAGTGACCTCAAGCT+AGG | 0.554276 | 2_2:+23582077 | None:intergenic |
TAGTTACCAGGTAGCTCCCA+TGG | 0.554498 | 2_2:+23583541 | None:intergenic |
CTGGTTATTGGAAAGCAACT+GGG | 0.564046 | 2_2:-23583330 | Msa0244800:CDS |
CTATTTGTACGCAAACCAGT+TGG | 0.564828 | 2_2:+23583364 | None:intergenic |
TTAACAGAGAAAGCTAAGAT+GGG | 0.570864 | 2_2:-23583430 | Msa0244800:intron |
TGTTGTTGTTCATGTGATGG+TGG | 0.571410 | 2_2:+23583713 | None:intergenic |
TATGGCTCTTGCAGTGAAAG+TGG | 0.573657 | 2_2:+23583591 | None:intergenic |
TAAGGAGATGAATCAAGAAG+AGG | 0.574988 | 2_2:+23582347 | None:intergenic |
GCTAGCACCACCGCATTCAA+CGG | 0.575873 | 2_2:-23582317 | Msa0244800:CDS |
TGTGAACCATGGGAGCTACC+TGG | 0.581438 | 2_2:-23583547 | Msa0244800:intron |
CTAAGATGGGTGAGAAAGAG+TGG | 0.584550 | 2_2:-23583417 | Msa0244800:CDS |
TATAGAGGAAGAGCTCCTAA+AGG | 0.593763 | 2_2:-23583241 | Msa0244800:CDS |
GTTGAATGCGGTGGTGCTAG+CGG | 0.597155 | 2_2:+23582319 | None:intergenic |
AGTGATGCACATTTACCACC+TGG | 0.600350 | 2_2:-23583679 | Msa0244800:CDS |
TCTCAACAAGTGTGAACCAT+GGG | 0.603575 | 2_2:-23583557 | Msa0244800:CDS |
AGGGTGGTGGTTGACAGTGG+TGG | 0.606408 | 2_2:-23581942 | Msa0244800:CDS |
CAAAGGGTGGTGGTTGACAG+TGG | 0.611515 | 2_2:-23581945 | Msa0244800:CDS |
TGAGTTCTTCATCAGTTGGG+TGG | 0.612148 | 2_2:+23583647 | None:intergenic |
GTGTTTCAAAAGAGTAACAC+TGG | 0.613580 | 2_2:-23582503 | Msa0244800:CDS |
ACCGTGACAGCCACCACAAG+TGG | 0.620040 | 2_2:-23582467 | Msa0244800:CDS |
GCCGGCGGAGGAGCAAAGGG+TGG | 0.622038 | 2_2:-23581958 | Msa0244800:CDS |
AAGCAAATTTGCCTTCAAGA+CGG | 0.624374 | 2_2:+23583188 | None:intergenic |
AACTTCAACAGCAACAACAA+TGG | 0.624816 | 2_2:-23582185 | Msa0244800:CDS |
GTACCTTGGAGTTTCTAGAG+AGG | 0.626435 | 2_2:+23583158 | None:intergenic |
GTTGGGTGGAAACGAAAACC+AGG | 0.626802 | 2_2:+23583661 | None:intergenic |
CTTCCTCTCTAGAAACTCCA+AGG | 0.629367 | 2_2:-23583161 | Msa0244800:intron |
CATTTGACCACCGTTGAATG+CGG | 0.634084 | 2_2:+23582307 | None:intergenic |
ACTTGTGGTGGCTGTCACGG+TGG | 0.643257 | 2_2:+23582469 | None:intergenic |
ATCTCAACAAGTGTGAACCA+TGG | 0.644661 | 2_2:-23583558 | Msa0244800:CDS |
GTGACAGCCACCACAAGTGG+TGG | 0.646314 | 2_2:-23582464 | Msa0244800:CDS |
TCTTCCTCTATAGAAAACAA+GGG | 0.657078 | 2_2:+23583252 | None:intergenic |
TTGACCACCGTTGAATGCGG+TGG | 0.662275 | 2_2:+23582310 | None:intergenic |
AGCACCACCGCATTCAACGG+TGG | 0.679955 | 2_2:-23582314 | Msa0244800:CDS |
TGTTGAAGTTGTTATGAACA+GGG | 0.693459 | 2_2:+23582198 | None:intergenic |
GGGTGGAAACGAAAACCAGG+TGG | 0.779261 | 2_2:+23583664 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCATAAAGAAAAATAAAAA+GGG | + | chr2_2:23582126-23582145 | None:intergenic | 10.0% |
!! | ATTCATAAAGAAAAATAAAA+AGG | + | chr2_2:23582127-23582146 | None:intergenic | 10.0% |
!!! | TTAGAAAATTTAACTTTATA+TGG | + | chr2_2:23582150-23582169 | None:intergenic | 10.0% |
!! | TTCATAAAGAAAAATAAAAA+GGG | + | chr2_2:23582126-23582145 | None:intergenic | 10.0% |
!! | ATTCATAAAGAAAAATAAAA+AGG | + | chr2_2:23582127-23582146 | None:intergenic | 10.0% |
!!! | TTAGAAAATTTAACTTTATA+TGG | + | chr2_2:23582150-23582169 | None:intergenic | 10.0% |
!!! | TTTTGAAAAATTAATGTGAA+TGG | + | chr2_2:23582855-23582874 | None:intergenic | 15.0% |
!!! | TTTTGAAAAATTAATGTGAA+TGG | + | chr2_2:23582855-23582874 | None:intergenic | 15.0% |
!!! | AAATTTTCTAACACTTTGTT+TGG | - | chr2_2:23582159-23582178 | Msa0244800:CDS | 20.0% |
!! | AAAATTAATGTGAATGGTTA+TGG | + | chr2_2:23582849-23582868 | None:intergenic | 20.0% |
!!! | ATGTATTTTTGAATTCATGA+AGG | - | chr2_2:23583071-23583090 | Msa0244800:intron | 20.0% |
!!! | AAATTTTCTAACACTTTGTT+TGG | - | chr2_2:23582159-23582178 | Msa0244800:CDS | 20.0% |
!! | AAAATTAATGTGAATGGTTA+TGG | + | chr2_2:23582849-23582868 | None:intergenic | 20.0% |
!!! | ATGTATTTTTGAATTCATGA+AGG | - | chr2_2:23583071-23583090 | Msa0244800:intron | 20.0% |
! | TAAAGGTGAAAAAAGTAACT+GGG | - | chr2_2:23582393-23582412 | Msa0244800:CDS | 25.0% |
! | TGAAAGAAAAATTAGTACCT+TGG | + | chr2_2:23582476-23582495 | None:intergenic | 25.0% |
!!! | GGAATCTTGTTTTTCTTAAT+AGG | - | chr2_2:23582626-23582645 | Msa0244800:intron | 25.0% |
!! | CTGTTTATAAAGTGAGATTT+TGG | + | chr2_2:23582992-23583011 | None:intergenic | 25.0% |
! | TAAAGGTGAAAAAAGTAACT+GGG | - | chr2_2:23582393-23582412 | Msa0244800:CDS | 25.0% |
! | TGAAAGAAAAATTAGTACCT+TGG | + | chr2_2:23582476-23582495 | None:intergenic | 25.0% |
!!! | GGAATCTTGTTTTTCTTAAT+AGG | - | chr2_2:23582626-23582645 | Msa0244800:intron | 25.0% |
!! | CTGTTTATAAAGTGAGATTT+TGG | + | chr2_2:23582992-23583011 | None:intergenic | 25.0% |
!!! | TGTCAAGAACTTTTTTGAGA+AGG | + | chr2_2:23582006-23582025 | None:intergenic | 30.0% |
! | TTGATGATAAGTTAGTTACC+AGG | + | chr2_2:23582091-23582110 | None:intergenic | 30.0% |
TTTAACAGAGAAAGCTAAGA+TGG | - | chr2_2:23582186-23582205 | Msa0244800:CDS | 30.0% | |
TTAACAGAGAAAGCTAAGAT+GGG | - | chr2_2:23582187-23582206 | Msa0244800:CDS | 30.0% | |
TCAAAAACTTACTCTCTTGT+TGG | - | chr2_2:23582331-23582350 | Msa0244800:CDS | 30.0% | |
!!! | AAAACCCTTGTTTTCTATAG+AGG | - | chr2_2:23582361-23582380 | Msa0244800:CDS | 30.0% |
TCTTCCTCTATAGAAAACAA+GGG | + | chr2_2:23582368-23582387 | None:intergenic | 30.0% | |
!!! | CAGTTACTTTTTTCACCTTT+AGG | + | chr2_2:23582394-23582413 | None:intergenic | 30.0% |
CTAAAGGTGAAAAAAGTAAC+TGG | - | chr2_2:23582392-23582411 | Msa0244800:CDS | 30.0% | |
!! | CTTTTGAAAGGATCAAAATG+CGG | + | chr2_2:23582591-23582610 | None:intergenic | 30.0% |
!! | TATCTCTCTAGTCTTTTGAA+AGG | + | chr2_2:23582603-23582622 | None:intergenic | 30.0% |
TTTCAAAAGACTAGAGAGAT+AGG | - | chr2_2:23582602-23582621 | Msa0244800:intron | 30.0% | |
TAATAGGCTTCTATATGCAT+TGG | - | chr2_2:23582642-23582661 | Msa0244800:intron | 30.0% | |
!! | GTTGATGATTTATCTCGATT+AGG | - | chr2_2:23582679-23582698 | Msa0244800:intron | 30.0% |
TGTTAATGGTTATTACCCTA+TGG | - | chr2_2:23582769-23582788 | Msa0244800:intron | 30.0% | |
CAAAATGAAACTGGTGAAAA+TGG | + | chr2_2:23582919-23582938 | None:intergenic | 30.0% | |
TTGAATTCATGAAGGATGAA+TGG | - | chr2_2:23583079-23583098 | Msa0244800:intron | 30.0% | |
TGAATTCATGAAGGATGAAT+GGG | - | chr2_2:23583080-23583099 | Msa0244800:intron | 30.0% | |
ATTTGATGTTGTAGATGTTG+TGG | + | chr2_2:23583394-23583413 | None:intergenic | 30.0% | |
TGTTGAAGTTGTTATGAACA+GGG | + | chr2_2:23583422-23583441 | None:intergenic | 30.0% | |
!!! | TGTCAAGAACTTTTTTGAGA+AGG | + | chr2_2:23582006-23582025 | None:intergenic | 30.0% |
! | TTGATGATAAGTTAGTTACC+AGG | + | chr2_2:23582091-23582110 | None:intergenic | 30.0% |
TTTAACAGAGAAAGCTAAGA+TGG | - | chr2_2:23582186-23582205 | Msa0244800:CDS | 30.0% | |
TTAACAGAGAAAGCTAAGAT+GGG | - | chr2_2:23582187-23582206 | Msa0244800:CDS | 30.0% | |
TCAAAAACTTACTCTCTTGT+TGG | - | chr2_2:23582331-23582350 | Msa0244800:CDS | 30.0% | |
!!! | AAAACCCTTGTTTTCTATAG+AGG | - | chr2_2:23582361-23582380 | Msa0244800:CDS | 30.0% |
TCTTCCTCTATAGAAAACAA+GGG | + | chr2_2:23582368-23582387 | None:intergenic | 30.0% | |
!!! | CAGTTACTTTTTTCACCTTT+AGG | + | chr2_2:23582394-23582413 | None:intergenic | 30.0% |
CTAAAGGTGAAAAAAGTAAC+TGG | - | chr2_2:23582392-23582411 | Msa0244800:CDS | 30.0% | |
!! | CTTTTGAAAGGATCAAAATG+CGG | + | chr2_2:23582591-23582610 | None:intergenic | 30.0% |
!! | TATCTCTCTAGTCTTTTGAA+AGG | + | chr2_2:23582603-23582622 | None:intergenic | 30.0% |
TTTCAAAAGACTAGAGAGAT+AGG | - | chr2_2:23582602-23582621 | Msa0244800:intron | 30.0% | |
TAATAGGCTTCTATATGCAT+TGG | - | chr2_2:23582642-23582661 | Msa0244800:intron | 30.0% | |
!! | GTTGATGATTTATCTCGATT+AGG | - | chr2_2:23582679-23582698 | Msa0244800:intron | 30.0% |
TGTTAATGGTTATTACCCTA+TGG | - | chr2_2:23582769-23582788 | Msa0244800:intron | 30.0% | |
CAAAATGAAACTGGTGAAAA+TGG | + | chr2_2:23582919-23582938 | None:intergenic | 30.0% | |
TTGAATTCATGAAGGATGAA+TGG | - | chr2_2:23583079-23583098 | Msa0244800:intron | 30.0% | |
TGAATTCATGAAGGATGAAT+GGG | - | chr2_2:23583080-23583099 | Msa0244800:intron | 30.0% | |
ATTTGATGTTGTAGATGTTG+TGG | + | chr2_2:23583394-23583413 | None:intergenic | 30.0% | |
TGTTGAAGTTGTTATGAACA+GGG | + | chr2_2:23583422-23583441 | None:intergenic | 30.0% | |
! | TACTGTTGTTGTTCATGTGA+TGG | + | chr2_2:23581910-23581929 | None:intergenic | 35.0% |
TGATGAGTTCTTCATCAGTT+GGG | + | chr2_2:23581976-23581995 | None:intergenic | 35.0% | |
CTCTTCCTCTATAGAAAACA+AGG | + | chr2_2:23582369-23582388 | None:intergenic | 35.0% | |
AAGCAAATTTGCCTTCAAGA+CGG | + | chr2_2:23582432-23582451 | None:intergenic | 35.0% | |
ACGCATCGTTTACATGTTAA+TGG | - | chr2_2:23582755-23582774 | Msa0244800:intron | 35.0% | |
AAACTCTTACATGCACCATA+GGG | + | chr2_2:23582787-23582806 | None:intergenic | 35.0% | |
TGTGAATACATGAGTTTGCA+TGG | - | chr2_2:23582820-23582839 | Msa0244800:intron | 35.0% | |
GTGAATACATGAGTTTGCAT+GGG | - | chr2_2:23582821-23582840 | Msa0244800:intron | 35.0% | |
! | TCACCAGTTTCATTTTGCAT+AGG | - | chr2_2:23582922-23582941 | Msa0244800:intron | 35.0% |
! | CACCAGTTTCATTTTGCATA+GGG | - | chr2_2:23582923-23582942 | Msa0244800:intron | 35.0% |
AACCCTATGCAAAATGAAAC+TGG | + | chr2_2:23582928-23582947 | None:intergenic | 35.0% | |
!! | TTGGTAGAAAAAAGCACTGT+TGG | + | chr2_2:23582973-23582992 | None:intergenic | 35.0% |
GTGTTTCAAAAGAGTAACAC+TGG | - | chr2_2:23583114-23583133 | Msa0244800:intron | 35.0% | |
CAAAAGAGTAACACTGGAAA+TGG | - | chr2_2:23583120-23583139 | Msa0244800:intron | 35.0% | |
TAAACTGAAGAAGGTGAACT+TGG | + | chr2_2:23583243-23583262 | None:intergenic | 35.0% | |
TAAGGAGATGAATCAAGAAG+AGG | + | chr2_2:23583273-23583292 | None:intergenic | 35.0% | |
CTGTTGAAGTTGTTATGAAC+AGG | + | chr2_2:23583423-23583442 | None:intergenic | 35.0% | |
AACTTCAACAGCAACAACAA+TGG | - | chr2_2:23583432-23583451 | Msa0244800:intron | 35.0% | |
! | TACTGTTGTTGTTCATGTGA+TGG | + | chr2_2:23581910-23581929 | None:intergenic | 35.0% |
TGATGAGTTCTTCATCAGTT+GGG | + | chr2_2:23581976-23581995 | None:intergenic | 35.0% | |
CTCTTCCTCTATAGAAAACA+AGG | + | chr2_2:23582369-23582388 | None:intergenic | 35.0% | |
AAGCAAATTTGCCTTCAAGA+CGG | + | chr2_2:23582432-23582451 | None:intergenic | 35.0% | |
ACGCATCGTTTACATGTTAA+TGG | - | chr2_2:23582755-23582774 | Msa0244800:intron | 35.0% | |
AAACTCTTACATGCACCATA+GGG | + | chr2_2:23582787-23582806 | None:intergenic | 35.0% | |
TGTGAATACATGAGTTTGCA+TGG | - | chr2_2:23582820-23582839 | Msa0244800:intron | 35.0% | |
GTGAATACATGAGTTTGCAT+GGG | - | chr2_2:23582821-23582840 | Msa0244800:intron | 35.0% | |
! | TCACCAGTTTCATTTTGCAT+AGG | - | chr2_2:23582922-23582941 | Msa0244800:intron | 35.0% |
! | CACCAGTTTCATTTTGCATA+GGG | - | chr2_2:23582923-23582942 | Msa0244800:intron | 35.0% |
AACCCTATGCAAAATGAAAC+TGG | + | chr2_2:23582928-23582947 | None:intergenic | 35.0% | |
!! | TTGGTAGAAAAAAGCACTGT+TGG | + | chr2_2:23582973-23582992 | None:intergenic | 35.0% |
GTGTTTCAAAAGAGTAACAC+TGG | - | chr2_2:23583114-23583133 | Msa0244800:intron | 35.0% | |
CAAAAGAGTAACACTGGAAA+TGG | - | chr2_2:23583120-23583139 | Msa0244800:intron | 35.0% | |
TAAACTGAAGAAGGTGAACT+TGG | + | chr2_2:23583243-23583262 | None:intergenic | 35.0% | |
TAAGGAGATGAATCAAGAAG+AGG | + | chr2_2:23583273-23583292 | None:intergenic | 35.0% | |
CTGTTGAAGTTGTTATGAAC+AGG | + | chr2_2:23583423-23583442 | None:intergenic | 35.0% | |
AACTTCAACAGCAACAACAA+TGG | - | chr2_2:23583432-23583451 | Msa0244800:intron | 35.0% | |
!! | TGTTCATGTGATGGTGGTAA+TGG | + | chr2_2:23581901-23581920 | None:intergenic | 40.0% |
! | TGTTGTTGTTCATGTGATGG+TGG | + | chr2_2:23581907-23581926 | None:intergenic | 40.0% |
GTGATGAGTTCTTCATCAGT+TGG | + | chr2_2:23581977-23581996 | None:intergenic | 40.0% | |
GTTGAGATCAACTTCAGCTA+TGG | + | chr2_2:23582047-23582066 | None:intergenic | 40.0% | |
ATCTCAACAAGTGTGAACCA+TGG | - | chr2_2:23582059-23582078 | Msa0244800:CDS | 40.0% | |
TCTCAACAAGTGTGAACCAT+GGG | - | chr2_2:23582060-23582079 | Msa0244800:CDS | 40.0% | |
!! | CGTGATAGAAAGTATCCAAC+TGG | - | chr2_2:23582238-23582257 | Msa0244800:CDS | 40.0% |
CTATTTGTACGCAAACCAGT+TGG | + | chr2_2:23582256-23582275 | None:intergenic | 40.0% | |
ACAAATAGAGCAACAGAAGC+TGG | - | chr2_2:23582268-23582287 | Msa0244800:CDS | 40.0% | |
CTGGTTATTGGAAAGCAACT+GGG | - | chr2_2:23582287-23582306 | Msa0244800:CDS | 40.0% | |
TATAGAGGAAGAGCTCCTAA+AGG | - | chr2_2:23582376-23582395 | Msa0244800:CDS | 40.0% | |
ATGCATGAATACCGTCTTGA+AGG | - | chr2_2:23582418-23582437 | Msa0244800:CDS | 40.0% | |
CAAAAGACTAGAGAGATAGG+TGG | - | chr2_2:23582605-23582624 | Msa0244800:intron | 40.0% | |
GAAACTCTTACATGCACCAT+AGG | + | chr2_2:23582788-23582807 | None:intergenic | 40.0% | |
GGTGGAAGATAAACTGAAGA+AGG | + | chr2_2:23583252-23583271 | None:intergenic | 40.0% | |
! | CTTTAGATCAGTGTTGTTGC+TGG | + | chr2_2:23583352-23583371 | None:intergenic | 40.0% |
CAGCAACAACACTGATCTAA+AGG | - | chr2_2:23583350-23583369 | Msa0244800:CDS | 40.0% | |
TGTAGATGTTGTGGAGAAAC+AGG | + | chr2_2:23583385-23583404 | None:intergenic | 40.0% | |
ACCTTCAATGACTGCAACAA+TGG | - | chr2_2:23583473-23583492 | Msa0244800:intron | 40.0% | |
TCCATTGTTGCAGTCATTGA+AGG | + | chr2_2:23583477-23583496 | None:intergenic | 40.0% | |
! | CAACAATGGATCCTTTTGCT+AGG | - | chr2_2:23583487-23583506 | Msa0244800:intron | 40.0% |
! | ATCCTTTTGCTAGGTTTCAG+AGG | - | chr2_2:23583496-23583515 | Msa0244800:intron | 40.0% |
!! | TTCCTCTGAAACCTAGCAAA+AGG | + | chr2_2:23583501-23583520 | None:intergenic | 40.0% |
!! | TTTCTGCTTTTCCTAGCTTG+AGG | - | chr2_2:23583529-23583548 | Msa0244800:intron | 40.0% |
! | GCTTCCTTTCTTTTTCTCCT+CGG | - | chr2_2:23583572-23583591 | Msa0244800:CDS | 40.0% |
!! | TGTTCATGTGATGGTGGTAA+TGG | + | chr2_2:23581901-23581920 | None:intergenic | 40.0% |
! | TGTTGTTGTTCATGTGATGG+TGG | + | chr2_2:23581907-23581926 | None:intergenic | 40.0% |
GTGATGAGTTCTTCATCAGT+TGG | + | chr2_2:23581977-23581996 | None:intergenic | 40.0% | |
GTTGAGATCAACTTCAGCTA+TGG | + | chr2_2:23582047-23582066 | None:intergenic | 40.0% | |
ATCTCAACAAGTGTGAACCA+TGG | - | chr2_2:23582059-23582078 | Msa0244800:CDS | 40.0% | |
TCTCAACAAGTGTGAACCAT+GGG | - | chr2_2:23582060-23582079 | Msa0244800:CDS | 40.0% | |
!! | CGTGATAGAAAGTATCCAAC+TGG | - | chr2_2:23582238-23582257 | Msa0244800:CDS | 40.0% |
CTATTTGTACGCAAACCAGT+TGG | + | chr2_2:23582256-23582275 | None:intergenic | 40.0% | |
ACAAATAGAGCAACAGAAGC+TGG | - | chr2_2:23582268-23582287 | Msa0244800:CDS | 40.0% | |
CTGGTTATTGGAAAGCAACT+GGG | - | chr2_2:23582287-23582306 | Msa0244800:CDS | 40.0% | |
TATAGAGGAAGAGCTCCTAA+AGG | - | chr2_2:23582376-23582395 | Msa0244800:CDS | 40.0% | |
ATGCATGAATACCGTCTTGA+AGG | - | chr2_2:23582418-23582437 | Msa0244800:CDS | 40.0% | |
CAAAAGACTAGAGAGATAGG+TGG | - | chr2_2:23582605-23582624 | Msa0244800:intron | 40.0% | |
GAAACTCTTACATGCACCAT+AGG | + | chr2_2:23582788-23582807 | None:intergenic | 40.0% | |
GGTGGAAGATAAACTGAAGA+AGG | + | chr2_2:23583252-23583271 | None:intergenic | 40.0% | |
! | CTTTAGATCAGTGTTGTTGC+TGG | + | chr2_2:23583352-23583371 | None:intergenic | 40.0% |
CAGCAACAACACTGATCTAA+AGG | - | chr2_2:23583350-23583369 | Msa0244800:CDS | 40.0% | |
TGTAGATGTTGTGGAGAAAC+AGG | + | chr2_2:23583385-23583404 | None:intergenic | 40.0% | |
ACCTTCAATGACTGCAACAA+TGG | - | chr2_2:23583473-23583492 | Msa0244800:intron | 40.0% | |
TCCATTGTTGCAGTCATTGA+AGG | + | chr2_2:23583477-23583496 | None:intergenic | 40.0% | |
! | CAACAATGGATCCTTTTGCT+AGG | - | chr2_2:23583487-23583506 | Msa0244800:intron | 40.0% |
! | ATCCTTTTGCTAGGTTTCAG+AGG | - | chr2_2:23583496-23583515 | Msa0244800:intron | 40.0% |
!! | TTCCTCTGAAACCTAGCAAA+AGG | + | chr2_2:23583501-23583520 | None:intergenic | 40.0% |
!! | TTTCTGCTTTTCCTAGCTTG+AGG | - | chr2_2:23583529-23583548 | Msa0244800:intron | 40.0% |
! | GCTTCCTTTCTTTTTCTCCT+CGG | - | chr2_2:23583572-23583591 | Msa0244800:CDS | 40.0% |
AGTGATGCACATTTACCACC+TGG | - | chr2_2:23581938-23581957 | Msa0244800:CDS | 45.0% | |
TGAGTTCTTCATCAGTTGGG+TGG | + | chr2_2:23581973-23581992 | None:intergenic | 45.0% | |
TATGGCTCTTGCAGTGAAAG+TGG | + | chr2_2:23582029-23582048 | None:intergenic | 45.0% | |
CTAAGATGGGTGAGAAAGAG+TGG | - | chr2_2:23582200-23582219 | Msa0244800:CDS | 45.0% | |
GAGCAACAGAAGCTGGTTAT+TGG | - | chr2_2:23582275-23582294 | Msa0244800:CDS | 45.0% | |
GCTGGTTATTGGAAAGCAAC+TGG | - | chr2_2:23582286-23582305 | Msa0244800:CDS | 45.0% | |
! | CTTCCTCTCTAGAAACTCCA+AGG | - | chr2_2:23582456-23582475 | Msa0244800:CDS | 45.0% |
! | GTACCTTGGAGTTTCTAGAG+AGG | + | chr2_2:23582462-23582481 | None:intergenic | 45.0% |
!!! | CTTTTTTGCACCACCACTTG+TGG | + | chr2_2:23583166-23583185 | None:intergenic | 45.0% |
!! | GGCTGAGTTTGAGGCTATTT+TGG | + | chr2_2:23583190-23583209 | None:intergenic | 45.0% |
AAGACTCATGCTGTTGTTGC+TGG | + | chr2_2:23583211-23583230 | None:intergenic | 45.0% | |
GAAGAAGGTGAACTTGGTTC+AGG | + | chr2_2:23583237-23583256 | None:intergenic | 45.0% | |
GGAGATGAATCAAGAAGAGG+TGG | + | chr2_2:23583270-23583289 | None:intergenic | 45.0% | |
CATTTGACCACCGTTGAATG+CGG | + | chr2_2:23583313-23583332 | None:intergenic | 45.0% | |
GCTAGGTTTCAGAGGAATGT+TGG | - | chr2_2:23583504-23583523 | Msa0244800:intron | 45.0% | |
TCTTGTAGTGACCTCAAGCT+AGG | + | chr2_2:23583543-23583562 | None:intergenic | 45.0% | |
! | TCCTTTCTTTTTCTCCTCGG+CGG | - | chr2_2:23583575-23583594 | Msa0244800:CDS | 45.0% |
! | TGGTGATATTCTTGGTGGCT+GGG | - | chr2_2:23583632-23583651 | Msa0244800:CDS | 45.0% |
! | GGTCTTAGCATTGGAGGATT+AGG | - | chr2_2:23583699-23583718 | Msa0244800:CDS | 45.0% |
AGTGATGCACATTTACCACC+TGG | - | chr2_2:23581938-23581957 | Msa0244800:CDS | 45.0% | |
TGAGTTCTTCATCAGTTGGG+TGG | + | chr2_2:23581973-23581992 | None:intergenic | 45.0% | |
TATGGCTCTTGCAGTGAAAG+TGG | + | chr2_2:23582029-23582048 | None:intergenic | 45.0% | |
CTAAGATGGGTGAGAAAGAG+TGG | - | chr2_2:23582200-23582219 | Msa0244800:CDS | 45.0% | |
GAGCAACAGAAGCTGGTTAT+TGG | - | chr2_2:23582275-23582294 | Msa0244800:CDS | 45.0% | |
GCTGGTTATTGGAAAGCAAC+TGG | - | chr2_2:23582286-23582305 | Msa0244800:CDS | 45.0% | |
! | CTTCCTCTCTAGAAACTCCA+AGG | - | chr2_2:23582456-23582475 | Msa0244800:CDS | 45.0% |
! | GTACCTTGGAGTTTCTAGAG+AGG | + | chr2_2:23582462-23582481 | None:intergenic | 45.0% |
!!! | CTTTTTTGCACCACCACTTG+TGG | + | chr2_2:23583166-23583185 | None:intergenic | 45.0% |
!! | GGCTGAGTTTGAGGCTATTT+TGG | + | chr2_2:23583190-23583209 | None:intergenic | 45.0% |
AAGACTCATGCTGTTGTTGC+TGG | + | chr2_2:23583211-23583230 | None:intergenic | 45.0% | |
GAAGAAGGTGAACTTGGTTC+AGG | + | chr2_2:23583237-23583256 | None:intergenic | 45.0% | |
GGAGATGAATCAAGAAGAGG+TGG | + | chr2_2:23583270-23583289 | None:intergenic | 45.0% | |
CATTTGACCACCGTTGAATG+CGG | + | chr2_2:23583313-23583332 | None:intergenic | 45.0% | |
GCTAGGTTTCAGAGGAATGT+TGG | - | chr2_2:23583504-23583523 | Msa0244800:intron | 45.0% | |
TCTTGTAGTGACCTCAAGCT+AGG | + | chr2_2:23583543-23583562 | None:intergenic | 45.0% | |
! | TCCTTTCTTTTTCTCCTCGG+CGG | - | chr2_2:23583575-23583594 | Msa0244800:CDS | 45.0% |
! | TGGTGATATTCTTGGTGGCT+GGG | - | chr2_2:23583632-23583651 | Msa0244800:CDS | 45.0% |
! | GGTCTTAGCATTGGAGGATT+AGG | - | chr2_2:23583699-23583718 | Msa0244800:CDS | 45.0% |
GTTGGGTGGAAACGAAAACC+AGG | + | chr2_2:23581959-23581978 | None:intergenic | 50.0% | |
TAGTTACCAGGTAGCTCCCA+TGG | + | chr2_2:23582079-23582098 | None:intergenic | 50.0% | |
! | TTTTGCACCACCACTTGTGG+TGG | + | chr2_2:23583163-23583182 | None:intergenic | 50.0% |
! | GTTGTTGCTGGCTGAGTTTG+AGG | + | chr2_2:23583199-23583218 | None:intergenic | 50.0% |
!! | GGTGGTGGTGGTGATATTCT+TGG | - | chr2_2:23583624-23583643 | Msa0244800:CDS | 50.0% |
! | GGTGGTGGTGATATTCTTGG+TGG | - | chr2_2:23583627-23583646 | Msa0244800:CDS | 50.0% |
! | GTGGTGATATTCTTGGTGGC+TGG | - | chr2_2:23583631-23583650 | Msa0244800:CDS | 50.0% |
! | GGTGATATTCTTGGTGGCTG+GGG | - | chr2_2:23583633-23583652 | Msa0244800:CDS | 50.0% |
! | GTGATATTCTTGGTGGCTGG+GGG | - | chr2_2:23583634-23583653 | Msa0244800:CDS | 50.0% |
!! | AGTGGTGGTGGTCTTAGCAT+TGG | - | chr2_2:23583690-23583709 | Msa0244800:CDS | 50.0% |
CTTCTGAGCTTGACTGCATG+TGG | - | chr2_2:23583724-23583743 | Msa0244800:CDS | 50.0% | |
GTTGGGTGGAAACGAAAACC+AGG | + | chr2_2:23581959-23581978 | None:intergenic | 50.0% | |
TAGTTACCAGGTAGCTCCCA+TGG | + | chr2_2:23582079-23582098 | None:intergenic | 50.0% | |
! | TTTTGCACCACCACTTGTGG+TGG | + | chr2_2:23583163-23583182 | None:intergenic | 50.0% |
! | GTTGTTGCTGGCTGAGTTTG+AGG | + | chr2_2:23583199-23583218 | None:intergenic | 50.0% |
!! | GGTGGTGGTGGTGATATTCT+TGG | - | chr2_2:23583624-23583643 | Msa0244800:CDS | 50.0% |
! | GGTGGTGGTGATATTCTTGG+TGG | - | chr2_2:23583627-23583646 | Msa0244800:CDS | 50.0% |
! | GTGGTGATATTCTTGGTGGC+TGG | - | chr2_2:23583631-23583650 | Msa0244800:CDS | 50.0% |
! | GGTGATATTCTTGGTGGCTG+GGG | - | chr2_2:23583633-23583652 | Msa0244800:CDS | 50.0% |
! | GTGATATTCTTGGTGGCTGG+GGG | - | chr2_2:23583634-23583653 | Msa0244800:CDS | 50.0% |
!! | AGTGGTGGTGGTCTTAGCAT+TGG | - | chr2_2:23583690-23583709 | Msa0244800:CDS | 50.0% |
CTTCTGAGCTTGACTGCATG+TGG | - | chr2_2:23583724-23583743 | Msa0244800:CDS | 50.0% | |
GGGTGGAAACGAAAACCAGG+TGG | + | chr2_2:23581956-23581975 | None:intergenic | 55.0% | |
TGTGAACCATGGGAGCTACC+TGG | - | chr2_2:23582070-23582089 | Msa0244800:CDS | 55.0% | |
ACCACTTGTGGTGGCTGTCA+CGG | + | chr2_2:23583154-23583173 | None:intergenic | 55.0% | |
! | GTTGAATGCGGTGGTGCTAG+CGG | + | chr2_2:23583301-23583320 | None:intergenic | 55.0% |
GCTAGCACCACCGCATTCAA+CGG | - | chr2_2:23583300-23583319 | Msa0244800:CDS | 55.0% | |
TTGACCACCGTTGAATGCGG+TGG | + | chr2_2:23583310-23583329 | None:intergenic | 55.0% | |
GCCGCCGAGGAGAAAAAGAA+AGG | + | chr2_2:23583579-23583598 | None:intergenic | 55.0% | |
! | CAAAGGGTGGTGGTTGACAG+TGG | - | chr2_2:23583672-23583691 | Msa0244800:CDS | 55.0% |
! | GGTGGTGGTCTTAGCATTGG+AGG | - | chr2_2:23583693-23583712 | Msa0244800:CDS | 55.0% |
GGGTGGAAACGAAAACCAGG+TGG | + | chr2_2:23581956-23581975 | None:intergenic | 55.0% | |
TGTGAACCATGGGAGCTACC+TGG | - | chr2_2:23582070-23582089 | Msa0244800:CDS | 55.0% | |
ACCACTTGTGGTGGCTGTCA+CGG | + | chr2_2:23583154-23583173 | None:intergenic | 55.0% | |
! | GTTGAATGCGGTGGTGCTAG+CGG | + | chr2_2:23583301-23583320 | None:intergenic | 55.0% |
GCTAGCACCACCGCATTCAA+CGG | - | chr2_2:23583300-23583319 | Msa0244800:CDS | 55.0% | |
TTGACCACCGTTGAATGCGG+TGG | + | chr2_2:23583310-23583329 | None:intergenic | 55.0% | |
GCCGCCGAGGAGAAAAAGAA+AGG | + | chr2_2:23583579-23583598 | None:intergenic | 55.0% | |
! | CAAAGGGTGGTGGTTGACAG+TGG | - | chr2_2:23583672-23583691 | Msa0244800:CDS | 55.0% |
! | GGTGGTGGTCTTAGCATTGG+AGG | - | chr2_2:23583693-23583712 | Msa0244800:CDS | 55.0% |
ACTTGTGGTGGCTGTCACGG+TGG | + | chr2_2:23583151-23583170 | None:intergenic | 60.0% | |
ACCGTGACAGCCACCACAAG+TGG | - | chr2_2:23583150-23583169 | Msa0244800:intron | 60.0% | |
GTGACAGCCACCACAAGTGG+TGG | - | chr2_2:23583153-23583172 | Msa0244800:intron | 60.0% | |
! | GTGGTGCTAGCGGCAGTGTA+AGG | + | chr2_2:23583291-23583310 | None:intergenic | 60.0% |
AGCACCACCGCATTCAACGG+TGG | - | chr2_2:23583303-23583322 | Msa0244800:CDS | 60.0% | |
! | CTTTTTCTCCTCGGCGGCTG+CGG | - | chr2_2:23583581-23583600 | Msa0244800:CDS | 60.0% |
ATCACCACCACCACCACCAC+CGG | + | chr2_2:23583619-23583638 | None:intergenic | 60.0% | |
! | AGGGTGGTGGTTGACAGTGG+TGG | - | chr2_2:23583675-23583694 | Msa0244800:CDS | 60.0% |
GTGGTGGTTGACAGTGGTGG+TGG | - | chr2_2:23583678-23583697 | Msa0244800:CDS | 60.0% | |
ACTTGTGGTGGCTGTCACGG+TGG | + | chr2_2:23583151-23583170 | None:intergenic | 60.0% | |
ACCGTGACAGCCACCACAAG+TGG | - | chr2_2:23583150-23583169 | Msa0244800:intron | 60.0% | |
GTGACAGCCACCACAAGTGG+TGG | - | chr2_2:23583153-23583172 | Msa0244800:intron | 60.0% | |
! | GTGGTGCTAGCGGCAGTGTA+AGG | + | chr2_2:23583291-23583310 | None:intergenic | 60.0% |
AGCACCACCGCATTCAACGG+TGG | - | chr2_2:23583303-23583322 | Msa0244800:CDS | 60.0% | |
! | CTTTTTCTCCTCGGCGGCTG+CGG | - | chr2_2:23583581-23583600 | Msa0244800:CDS | 60.0% |
ATCACCACCACCACCACCAC+CGG | + | chr2_2:23583619-23583638 | None:intergenic | 60.0% | |
! | AGGGTGGTGGTTGACAGTGG+TGG | - | chr2_2:23583675-23583694 | Msa0244800:CDS | 60.0% |
GTGGTGGTTGACAGTGGTGG+TGG | - | chr2_2:23583678-23583697 | Msa0244800:CDS | 60.0% | |
!! | CAGCCTTTTCCCGGTGGTGG+TGG | - | chr2_2:23583606-23583625 | Msa0244800:CDS | 65.0% |
CCACCACCACCACCGGGAAA+AGG | + | chr2_2:23583612-23583631 | None:intergenic | 65.0% | |
!!! | CCTTTTCCCGGTGGTGGTGG+TGG | - | chr2_2:23583609-23583628 | Msa0244800:CDS | 65.0% |
!! | TTTCCCGGTGGTGGTGGTGG+TGG | - | chr2_2:23583612-23583631 | Msa0244800:CDS | 65.0% |
TCACCACCACCACCACCACC+GGG | + | chr2_2:23583618-23583637 | None:intergenic | 65.0% | |
! | TCTTGGTGGCTGGGGGATGC+CGG | - | chr2_2:23583641-23583660 | Msa0244800:CDS | 65.0% |
GATGCCGGCGGAGGAGCAAA+GGG | - | chr2_2:23583656-23583675 | Msa0244800:CDS | 65.0% | |
ACCACCCTTTGCTCCTCCGC+CGG | + | chr2_2:23583663-23583682 | None:intergenic | 65.0% | |
!! | CAGCCTTTTCCCGGTGGTGG+TGG | - | chr2_2:23583606-23583625 | Msa0244800:CDS | 65.0% |
CCACCACCACCACCGGGAAA+AGG | + | chr2_2:23583612-23583631 | None:intergenic | 65.0% | |
!!! | CCTTTTCCCGGTGGTGGTGG+TGG | - | chr2_2:23583609-23583628 | Msa0244800:CDS | 65.0% |
!! | TTTCCCGGTGGTGGTGGTGG+TGG | - | chr2_2:23583612-23583631 | Msa0244800:CDS | 65.0% |
TCACCACCACCACCACCACC+GGG | + | chr2_2:23583618-23583637 | None:intergenic | 65.0% | |
! | TCTTGGTGGCTGGGGGATGC+CGG | - | chr2_2:23583641-23583660 | Msa0244800:CDS | 65.0% |
GATGCCGGCGGAGGAGCAAA+GGG | - | chr2_2:23583656-23583675 | Msa0244800:CDS | 65.0% | |
ACCACCCTTTGCTCCTCCGC+CGG | + | chr2_2:23583663-23583682 | None:intergenic | 65.0% | |
! | GCTGCGGCGCAGCCTTTTCC+CGG | - | chr2_2:23583597-23583616 | Msa0244800:CDS | 70.0% |
! | GCGCAGCCTTTTCCCGGTGG+TGG | - | chr2_2:23583603-23583622 | Msa0244800:CDS | 70.0% |
GGATGCCGGCGGAGGAGCAA+AGG | - | chr2_2:23583655-23583674 | Msa0244800:CDS | 70.0% | |
GGCGGAGGAGCAAAGGGTGG+TGG | - | chr2_2:23583662-23583681 | Msa0244800:CDS | 70.0% | |
! | GCTGCGGCGCAGCCTTTTCC+CGG | - | chr2_2:23583597-23583616 | Msa0244800:CDS | 70.0% |
! | GCGCAGCCTTTTCCCGGTGG+TGG | - | chr2_2:23583603-23583622 | Msa0244800:CDS | 70.0% |
GGATGCCGGCGGAGGAGCAA+AGG | - | chr2_2:23583655-23583674 | Msa0244800:CDS | 70.0% | |
GGCGGAGGAGCAAAGGGTGG+TGG | - | chr2_2:23583662-23583681 | Msa0244800:CDS | 70.0% | |
! | GCGGCGCAGCCTTTTCCCGG+TGG | - | chr2_2:23583600-23583619 | Msa0244800:CDS | 75.0% |
TGGTGGCTGGGGGATGCCGG+CGG | - | chr2_2:23583644-23583663 | Msa0244800:CDS | 75.0% | |
GCCGGCGGAGGAGCAAAGGG+TGG | - | chr2_2:23583659-23583678 | Msa0244800:CDS | 75.0% | |
! | GCGGCGCAGCCTTTTCCCGG+TGG | - | chr2_2:23583600-23583619 | Msa0244800:CDS | 75.0% |
TGGTGGCTGGGGGATGCCGG+CGG | - | chr2_2:23583644-23583663 | Msa0244800:CDS | 75.0% | |
GCCGGCGGAGGAGCAAAGGG+TGG | - | chr2_2:23583659-23583678 | Msa0244800:CDS | 75.0% | |
! | TGGCTGGGGGATGCCGGCGG+AGG | - | chr2_2:23583647-23583666 | Msa0244800:CDS | 80.0% |
! | TGGCTGGGGGATGCCGGCGG+AGG | - | chr2_2:23583647-23583666 | Msa0244800:CDS | 80.0% |
! | AGGCTGCGCCGCAGCCGCCG+AGG | + | chr2_2:23583592-23583611 | None:intergenic | 85.0% |
! | AGGCTGCGCCGCAGCCGCCG+AGG | + | chr2_2:23583592-23583611 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 23581884 | 23583755 | 23581884 | ID=Msa0244800;Name=Msa0244800 |
chr2_2 | mRNA | 23581884 | 23583755 | 23581884 | ID=Msa0244800-mRNA-1;Parent=Msa0244800;Name=Msa0244800-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0|1|1|1|3|0|384 |
chr2_2 | exon | 23583548 | 23583755 | 23583548 | ID=Msa0244800-mRNA-1:exon:9020;Parent=Msa0244800-mRNA-1 |
chr2_2 | exon | 23583162 | 23583445 | 23583162 | ID=Msa0244800-mRNA-1:exon:9019;Parent=Msa0244800-mRNA-1 |
chr2_2 | exon | 23581884 | 23582546 | 23581884 | ID=Msa0244800-mRNA-1:exon:9018;Parent=Msa0244800-mRNA-1 |
chr2_2 | CDS | 23583548 | 23583755 | 23583548 | ID=Msa0244800-mRNA-1:cds;Parent=Msa0244800-mRNA-1 |
chr2_2 | CDS | 23583162 | 23583445 | 23583162 | ID=Msa0244800-mRNA-1:cds;Parent=Msa0244800-mRNA-1 |
chr2_2 | CDS | 23581884 | 23582546 | 23581884 | ID=Msa0244800-mRNA-1:cds;Parent=Msa0244800-mRNA-1 |
Gene Sequence |
Protein sequence |