Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245520 | QOV03064.1 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245520 | sp|Q5D0W8|NPR1_ORYSI | 57.401 | 554 | 199 | 8 | 50 | 576 | 36 | 579 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245520 | A0A7U3NJF6 | 100.000 | 586 | 0 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1210 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0245520 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245520 | MtrunA17_Chr2g0299621 | 94.369 | 586 | 31 | 1 | 1 | 586 | 1 | 584 | 0.0 | 1084 |
| Msa0245520 | MtrunA17_Chr2g0291741 | 42.934 | 559 | 286 | 11 | 18 | 558 | 21 | 564 | 2.48e-143 | 427 |
| Msa0245520 | MtrunA17_Chr5g0442661 | 40.113 | 531 | 292 | 9 | 50 | 563 | 50 | 571 | 5.81e-123 | 375 |
| Msa0245520 | MtrunA17_Chr1g0171771 | 31.452 | 372 | 211 | 9 | 67 | 402 | 24 | 387 | 4.59e-39 | 149 |
| Msa0245520 | MtrunA17_Chr7g0256321 | 30.645 | 372 | 215 | 7 | 67 | 402 | 24 | 388 | 8.72e-38 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245520 | AT1G64280.1 | 51.664 | 571 | 243 | 9 | 7 | 558 | 7 | 563 | 0.0 | 548 |
| Msa0245520 | AT4G26120.2 | 49.739 | 575 | 255 | 10 | 12 | 569 | 16 | 573 | 2.10e-177 | 515 |
| Msa0245520 | AT4G26120.1 | 49.739 | 575 | 255 | 10 | 12 | 569 | 15 | 572 | 2.34e-177 | 515 |
| Msa0245520 | AT4G19660.1 | 40.619 | 549 | 283 | 12 | 31 | 555 | 22 | 551 | 3.12e-122 | 373 |
| Msa0245520 | AT5G45110.1 | 42.424 | 528 | 272 | 11 | 50 | 556 | 43 | 559 | 5.62e-122 | 372 |
| Msa0245520 | AT4G19660.2 | 38.889 | 576 | 282 | 13 | 31 | 555 | 22 | 578 | 6.59e-117 | 360 |
| Msa0245520 | AT5G45110.2 | 41.615 | 483 | 250 | 11 | 50 | 514 | 43 | 511 | 9.76e-108 | 333 |
| Msa0245520 | AT3G57130.1 | 31.522 | 368 | 213 | 7 | 67 | 402 | 26 | 386 | 2.35e-40 | 153 |
| Msa0245520 | AT2G41370.1 | 29.648 | 398 | 224 | 9 | 54 | 402 | 3 | 393 | 7.51e-37 | 144 |
Find 96 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAATTTACTCCGAATT+TGG | 0.080716 | 2_2:-25281552 | Msa0245520:CDS |
| TGCGAGGAGTAGTTTCTTTA+AGG | 0.142531 | 2_2:-25283073 | Msa0245520:CDS |
| GCGCTTCACTTGTCGATCTT+CGG | 0.290085 | 2_2:+25281063 | None:intergenic |
| TGAATTGCTTGCTCTTTATC+AGG | 0.291540 | 2_2:-25282806 | Msa0245520:intron |
| ACTAGACATTCTTGACAAAA+TGG | 0.299539 | 2_2:-25282503 | Msa0245520:CDS |
| ATGTTTGTCTAGAAGATTTA+CGG | 0.318420 | 2_2:+25282285 | None:intergenic |
| ATCTAAAGCTCTATGTATTC+TGG | 0.325893 | 2_2:+25282258 | None:intergenic |
| CGCTTCACTTGTCGATCTTC+GGG | 0.329375 | 2_2:+25281064 | None:intergenic |
| GCTACAAGAAGTTCTTAATA+AGG | 0.338445 | 2_2:-25281026 | Msa0245520:CDS |
| ACTACTGAGCTTCTTGATCT+TGG | 0.343475 | 2_2:-25282130 | Msa0245520:CDS |
| TCGATTGTGTATCGAGATAT+TGG | 0.362910 | 2_2:-25281888 | Msa0245520:CDS |
| TCTGAATTTACTCCGAATTT+GGG | 0.369283 | 2_2:-25281551 | Msa0245520:CDS |
| TCATCTTGAGCAGTGGAGTT+GGG | 0.376033 | 2_2:-25281178 | Msa0245520:intron |
| AATTCAGATGTGCCATCAAT+TGG | 0.381830 | 2_2:+25281566 | None:intergenic |
| AAAGAGGAGTTTGATAAATC+TGG | 0.386748 | 2_2:-25280989 | Msa0245520:CDS |
| GAAGTAGTGATAGCTGAATT+TGG | 0.388122 | 2_2:+25283246 | None:intergenic |
| ATTGTTTACACTTTGGTTGT+TGG | 0.395598 | 2_2:-25282885 | Msa0245520:CDS |
| GTTCTGCGTTATTTGTATAG+TGG | 0.398609 | 2_2:-25282964 | Msa0245520:CDS |
| TCATCCTCATCCACGTCAAT+AGG | 0.401640 | 2_2:-25280956 | Msa0245520:CDS |
| CTCTGGCAACCACCCAAATT+CGG | 0.404385 | 2_2:+25281539 | None:intergenic |
| CAAACTCCTCTTTGTCCTCA+TGG | 0.421934 | 2_2:+25280999 | None:intergenic |
| GTGGCTAAGGATTATGATGT+TGG | 0.425431 | 2_2:-25283006 | Msa0245520:CDS |
| AGAAACTTCTCGACCATCTC+TGG | 0.426255 | 2_2:+25283116 | None:intergenic |
| TAAAAGAGGAGCATCTAATT+CGG | 0.429046 | 2_2:-25281481 | Msa0245520:CDS |
| TCTCTTTCTCTTGCTAAGGC+AGG | 0.429539 | 2_2:-25281827 | Msa0245520:CDS |
| CAGATGATGTAGAATTAGTA+AGG | 0.438766 | 2_2:-25282234 | Msa0245520:CDS |
| CTCTTTCTCTTGCTAAGGCA+GGG | 0.442710 | 2_2:-25281826 | Msa0245520:CDS |
| TTCTGCGTTATTTGTATAGT+GGG | 0.448053 | 2_2:-25282963 | Msa0245520:CDS |
| GTCATCTTGAGCAGTGGAGT+TGG | 0.451507 | 2_2:-25281179 | Msa0245520:intron |
| TATATTACTTGTTTCACTAC+AGG | 0.453006 | 2_2:+25282343 | None:intergenic |
| GGCATCTCTTTCTCTTGCTA+AGG | 0.467473 | 2_2:-25281831 | Msa0245520:CDS |
| CCTATCGCAGCTTGCATGCA+TGG | 0.468067 | 2_2:-25281098 | Msa0245520:CDS |
| ATGGATATCAATCCAATTGA+TGG | 0.475189 | 2_2:-25281578 | Msa0245520:CDS |
| TGGCTAAGGATTATGATGTT+GGG | 0.476464 | 2_2:-25283005 | Msa0245520:CDS |
| TGAAGCATGAAATCAACAAC+AGG | 0.485589 | 2_2:+25282862 | None:intergenic |
| TGGTTGCCAGAGGACAACTA+TGG | 0.504234 | 2_2:-25281528 | Msa0245520:CDS |
| ATCACAACCTTTGCTTCCAT+CGG | 0.509584 | 2_2:+25281599 | None:intergenic |
| GAGCAGTGGAGTTGGGGAAA+CGG | 0.514130 | 2_2:-25281171 | Msa0245520:intron |
| CTTTCCTATTGACGTGGATG+AGG | 0.515811 | 2_2:+25280952 | None:intergenic |
| AGAAGTGTTGAACAAGATCA+TGG | 0.517746 | 2_2:-25281131 | Msa0245520:CDS |
| TCTTTCTCTTGCTAAGGCAG+GGG | 0.519191 | 2_2:-25281825 | Msa0245520:CDS |
| ATTGGAGCAAGCTGAGAGAA+GGG | 0.524671 | 2_2:-25281870 | Msa0245520:CDS |
| GATGATGATTGTTTACACTT+TGG | 0.524715 | 2_2:-25282892 | Msa0245520:CDS |
| ATTGTATCTTTGTTAACGAA+GGG | 0.525145 | 2_2:-25282028 | Msa0245520:CDS |
| GTCGAGAAGTTTCTGTGCAC+CGG | 0.525175 | 2_2:-25283107 | Msa0245520:CDS |
| TCAAGTCCATAGTTGTCCTC+TGG | 0.532702 | 2_2:+25281522 | None:intergenic |
| GTAATGATGTACTTGAGAAG+TGG | 0.540852 | 2_2:-25283339 | Msa0245520:CDS |
| TATTGGAGCAAGCTGAGAGA+AGG | 0.543360 | 2_2:-25281871 | Msa0245520:CDS |
| TATTATAAATCTACTGAGGA+AGG | 0.543578 | 2_2:-25281929 | Msa0245520:CDS |
| ATGAAGGCGTTGTCTAGAGC+AGG | 0.543907 | 2_2:-25281458 | Msa0245520:intron |
| CATCTTGAGCAGTGGAGTTG+GGG | 0.545384 | 2_2:-25281177 | Msa0245520:intron |
| GCAACTGAAGGAAGTGGCTA+AGG | 0.548393 | 2_2:-25283019 | Msa0245520:CDS |
| TAAATCTACTGAGGAAGGAA+AGG | 0.549862 | 2_2:-25281924 | Msa0245520:CDS |
| GGCACCATTTAAAATAAAAG+AGG | 0.551112 | 2_2:-25281495 | Msa0245520:CDS |
| TATTGTATCTTTGTTAACGA+AGG | 0.551812 | 2_2:-25282029 | Msa0245520:CDS |
| ACTTGTTTCACTACAGGTTG+AGG | 0.554485 | 2_2:+25282349 | None:intergenic |
| CCTTCTGAACTCACTTTCGA+TGG | 0.555532 | 2_2:-25281998 | Msa0245520:CDS |
| AGAAACGACGCTGCAACTGA+AGG | 0.556254 | 2_2:-25283031 | Msa0245520:CDS |
| CCTTGACTTTCCTATTGACG+TGG | 0.557026 | 2_2:+25280946 | None:intergenic |
| GGAGCATCTAATTCGGATGA+AGG | 0.559886 | 2_2:-25281474 | Msa0245520:CDS |
| TGCAAGCTGCGATAGGTCAT+CGG | 0.560452 | 2_2:+25281105 | None:intergenic |
| CTATCGCAGCTTGCATGCAT+GGG | 0.560772 | 2_2:-25281097 | Msa0245520:CDS |
| GCAAAGATCATTGCCAGAGA+TGG | 0.562499 | 2_2:-25283129 | Msa0245520:CDS |
| CCATGCATGCAAGCTGCGAT+AGG | 0.568643 | 2_2:+25281098 | None:intergenic |
| AGAGATGCCTCACCATGTAA+AGG | 0.569360 | 2_2:+25281845 | None:intergenic |
| GAGAGAAGGGAGCCTTTACA+TGG | 0.569857 | 2_2:-25281857 | Msa0245520:CDS |
| CCATCGAAAGTGAGTTCAGA+AGG | 0.573318 | 2_2:+25281998 | None:intergenic |
| TAAAGATGTTTGTGTTTGTG+TGG | 0.576566 | 2_2:-25282914 | Msa0245520:CDS |
| TTTGTTTCCGATGGAAGCAA+AGG | 0.576921 | 2_2:-25281606 | Msa0245520:CDS |
| AAGCAATTCAGAAATTTGAA+AGG | 0.578420 | 2_2:+25282819 | None:intergenic |
| GACAACTATGGACTTGAATG+AGG | 0.586182 | 2_2:-25281516 | Msa0245520:CDS |
| TCTGGCAATGATCTTTGCAT+CGG | 0.586644 | 2_2:+25283134 | None:intergenic |
| AAGCTATATTGTCTGATAGA+CGG | 0.587341 | 2_2:+25283190 | None:intergenic |
| GACGCTGCAACTGAAGGAAG+TGG | 0.587989 | 2_2:-25283025 | Msa0245520:CDS |
| CGAATTTGGGTGGTTGCCAG+AGG | 0.588649 | 2_2:-25281538 | Msa0245520:CDS |
| GAATTTACTCCGAATTTGGG+TGG | 0.588904 | 2_2:-25281548 | Msa0245520:CDS |
| GATGGAAGCAAAGGTTGTGA+TGG | 0.592814 | 2_2:-25281597 | Msa0245520:CDS |
| CCACGTCAATAGGAAAGTCA+AGG | 0.595019 | 2_2:-25280946 | Msa0245520:CDS |
| GGCAATAGATGACATGTTGG+TGG | 0.595976 | 2_2:-25282482 | Msa0245520:CDS |
| TCCTCGCAGACAAAATGCAC+CGG | 0.610061 | 2_2:+25283088 | None:intergenic |
| AATGAAATCAGCAACAACAC+TGG | 0.615518 | 2_2:-25283300 | Msa0245520:CDS |
| AAAGCGTAGTACGAAAGCTG+TGG | 0.616351 | 2_2:-25281954 | Msa0245520:CDS |
| AAGGGAGCCTTTACATGGTG+AGG | 0.619314 | 2_2:-25281852 | Msa0245520:CDS |
| CACGTCAATAGGAAAGTCAA+GGG | 0.630823 | 2_2:-25280945 | Msa0245520:CDS |
| ATATTGTCTGATAGACGGAT+CGG | 0.631580 | 2_2:+25283195 | None:intergenic |
| AAGATCAAGAAGCTCAGTAG+TGG | 0.633228 | 2_2:+25282132 | None:intergenic |
| GGTCTTCCATGAGGACAAAG+AGG | 0.638424 | 2_2:-25281005 | Msa0245520:CDS |
| AGTGAAGCGCAGACGATACG+CGG | 0.639553 | 2_2:-25281050 | Msa0245520:CDS |
| AATGGCAATAGATGACATGT+TGG | 0.639924 | 2_2:-25282485 | Msa0245520:CDS |
| ATATACAAACGCAAACAACT+CGG | 0.651687 | 2_2:-25282325 | Msa0245520:CDS |
| AGGACACACTACTCTAGATG+AGG | 0.655016 | 2_2:-25282197 | Msa0245520:CDS |
| TTGTCTGATAGACGGATCGG+TGG | 0.664514 | 2_2:+25283198 | None:intergenic |
| TCTTAATAAGGTCTTCCATG+AGG | 0.672788 | 2_2:-25281014 | Msa0245520:CDS |
| GGATTATTATAAATCTACTG+AGG | 0.714422 | 2_2:-25281933 | Msa0245520:CDS |
| TTCAACACTTCTGAGCAACG+AGG | 0.719258 | 2_2:+25281142 | None:intergenic |
| TTGTTGTACCTAGAAAACCG+AGG | 0.809311 | 2_2:-25281785 | Msa0245520:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_2:25281514-25281533 | Msa0245520:CDS | 15.0% |
| !! | ATGAAATTAAATTAACTGAA+AGG | + | chr2_2:25281660-25281679 | None:intergenic | 15.0% |
| !!! | AAGATTTTTATGATTTACAT+CGG | + | chr2_2:25282150-25282169 | None:intergenic | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_2:25282150-25282169 | Msa0245520:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_2:25282151-25282170 | Msa0245520:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_2:25282215-25282234 | None:intergenic | 15.0% |
| !! | TCAACATTTATTATGAAATT+CGG | + | chr2_2:25282581-25282600 | None:intergenic | 15.0% |
| !!! | TTTTAGAGATTTAAATACAA+TGG | + | chr2_2:25282896-25282915 | None:intergenic | 15.0% |
| !! | AGCAAAATTTAACAAATAAA+TGG | + | chr2_2:25283020-25283039 | None:intergenic | 15.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_2:25281514-25281533 | Msa0245520:CDS | 15.0% |
| !! | ATGAAATTAAATTAACTGAA+AGG | + | chr2_2:25281660-25281679 | None:intergenic | 15.0% |
| !!! | AAGATTTTTATGATTTACAT+CGG | + | chr2_2:25282150-25282169 | None:intergenic | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_2:25282150-25282169 | Msa0245520:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_2:25282151-25282170 | Msa0245520:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_2:25282215-25282234 | None:intergenic | 15.0% |
| !! | TCAACATTTATTATGAAATT+CGG | + | chr2_2:25282581-25282600 | None:intergenic | 15.0% |
| !!! | TTTTAGAGATTTAAATACAA+TGG | + | chr2_2:25282896-25282915 | None:intergenic | 15.0% |
| !! | AGCAAAATTTAACAAATAAA+TGG | + | chr2_2:25283020-25283039 | None:intergenic | 15.0% |
| !!! | TTTCTTTAAGGATGTTTTTA+AGG | - | chr2_2:25281188-25281207 | Msa0245520:intron | 20.0% |
| !!! | TTCTTTAAGGATGTTTTTAA+GGG | - | chr2_2:25281189-25281208 | Msa0245520:intron | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_2:25281513-25281532 | Msa0245520:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_2:25281515-25281534 | Msa0245520:CDS | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_2:25282152-25282171 | Msa0245520:CDS | 20.0% |
| !! | CAACATTTATTATGAAATTC+GGG | + | chr2_2:25282580-25282599 | None:intergenic | 20.0% |
| !! | TTATTTGAGAACTTTCTTAA+AGG | - | chr2_2:25282843-25282862 | Msa0245520:CDS | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_2:25282924-25282943 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_2:25282991-25283010 | Msa0245520:CDS | 20.0% |
| !!! | TTTCTTTAAGGATGTTTTTA+AGG | - | chr2_2:25281188-25281207 | Msa0245520:intron | 20.0% |
| !!! | TTCTTTAAGGATGTTTTTAA+GGG | - | chr2_2:25281189-25281208 | Msa0245520:intron | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_2:25281513-25281532 | Msa0245520:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_2:25281515-25281534 | Msa0245520:CDS | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_2:25282152-25282171 | Msa0245520:CDS | 20.0% |
| !! | CAACATTTATTATGAAATTC+GGG | + | chr2_2:25282580-25282599 | None:intergenic | 20.0% |
| !! | TTATTTGAGAACTTTCTTAA+AGG | - | chr2_2:25282843-25282862 | Msa0245520:CDS | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_2:25282924-25282943 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_2:25282991-25283010 | Msa0245520:CDS | 20.0% |
| ! | AAGCAATTCAGAAATTTGAA+AGG | + | chr2_2:25281433-25281452 | None:intergenic | 25.0% |
| ! | TATATTACTTGTTTCACTAC+AGG | + | chr2_2:25281909-25281928 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_2:25281967-25281986 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_2:25282220-25282239 | Msa0245520:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_2:25282221-25282240 | Msa0245520:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_2:25282316-25282335 | Msa0245520:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_2:25282320-25282339 | Msa0245520:CDS | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_2:25282761-25282780 | None:intergenic | 25.0% |
| ! | TCTCAAATAAAACGAAAGAT+CGG | + | chr2_2:25282833-25282852 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_2:25282935-25282954 | Msa0245520:CDS | 25.0% |
| ! | GTTCGAAAACAATTGATATA+GGG | - | chr2_2:25282962-25282981 | Msa0245520:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_2:25282989-25283008 | None:intergenic | 25.0% |
| ! | AAGCAATTCAGAAATTTGAA+AGG | + | chr2_2:25281433-25281452 | None:intergenic | 25.0% |
| ! | TATATTACTTGTTTCACTAC+AGG | + | chr2_2:25281909-25281928 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_2:25281967-25281986 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_2:25282220-25282239 | Msa0245520:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_2:25282221-25282240 | Msa0245520:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_2:25282316-25282335 | Msa0245520:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_2:25282320-25282339 | Msa0245520:CDS | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_2:25282761-25282780 | None:intergenic | 25.0% |
| ! | TCTCAAATAAAACGAAAGAT+CGG | + | chr2_2:25282833-25282852 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_2:25282935-25282954 | Msa0245520:CDS | 25.0% |
| ! | GTTCGAAAACAATTGATATA+GGG | - | chr2_2:25282962-25282981 | Msa0245520:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_2:25282989-25283008 | None:intergenic | 25.0% |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_2:25281062-25281081 | None:intergenic | 30.0% | |
| TTCTGCGTTATTTGTATAGT+GGG | - | chr2_2:25281286-25281305 | Msa0245520:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_2:25281335-25281354 | Msa0245520:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_2:25281357-25281376 | Msa0245520:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_2:25281364-25281383 | Msa0245520:intron | 30.0% | |
| ACTAGACATTCTTGACAAAA+TGG | - | chr2_2:25281746-25281765 | Msa0245520:intron | 30.0% | |
| ! | TTTTCTATGGCAAACATTTG+TGG | - | chr2_2:25281792-25281811 | Msa0245520:CDS | 30.0% |
| ATATACAAACGCAAACAACT+CGG | - | chr2_2:25281924-25281943 | Msa0245520:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_2:25281994-25282013 | None:intergenic | 30.0% |
| CAGATGATGTAGAATTAGTA+AGG | - | chr2_2:25282015-25282034 | Msa0245520:CDS | 30.0% | |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_2:25282484-25282503 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_2:25282608-25282627 | Msa0245520:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_2:25282671-25282690 | Msa0245520:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_2:25282697-25282716 | Msa0245520:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_2:25282698-25282717 | Msa0245520:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_2:25282754-25282773 | Msa0245520:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_2:25282768-25282787 | Msa0245520:intron | 30.0% |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_2:25282940-25282959 | Msa0245520:CDS | 30.0% | |
| GGTTCGAAAACAATTGATAT+AGG | - | chr2_2:25282961-25282980 | Msa0245520:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_2:25283223-25283242 | Msa0245520:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_2:25283260-25283279 | Msa0245520:CDS | 30.0% | |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_2:25281062-25281081 | None:intergenic | 30.0% | |
| TTCTGCGTTATTTGTATAGT+GGG | - | chr2_2:25281286-25281305 | Msa0245520:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_2:25281335-25281354 | Msa0245520:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_2:25281357-25281376 | Msa0245520:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_2:25281364-25281383 | Msa0245520:intron | 30.0% | |
| ACTAGACATTCTTGACAAAA+TGG | - | chr2_2:25281746-25281765 | Msa0245520:intron | 30.0% | |
| ! | TTTTCTATGGCAAACATTTG+TGG | - | chr2_2:25281792-25281811 | Msa0245520:CDS | 30.0% |
| ATATACAAACGCAAACAACT+CGG | - | chr2_2:25281924-25281943 | Msa0245520:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_2:25281994-25282013 | None:intergenic | 30.0% |
| CAGATGATGTAGAATTAGTA+AGG | - | chr2_2:25282015-25282034 | Msa0245520:CDS | 30.0% | |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_2:25282484-25282503 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_2:25282608-25282627 | Msa0245520:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_2:25282671-25282690 | Msa0245520:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_2:25282697-25282716 | Msa0245520:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_2:25282698-25282717 | Msa0245520:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_2:25282754-25282773 | Msa0245520:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_2:25282768-25282787 | Msa0245520:intron | 30.0% |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_2:25282940-25282959 | Msa0245520:CDS | 30.0% | |
| GGTTCGAAAACAATTGATAT+AGG | - | chr2_2:25282961-25282980 | Msa0245520:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_2:25283223-25283242 | Msa0245520:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_2:25283260-25283279 | Msa0245520:CDS | 30.0% | |
| AATGAAATCAGCAACAACAC+TGG | - | chr2_2:25280949-25280968 | Msa0245520:CDS | 35.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_2:25281006-25281025 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_2:25281057-25281076 | None:intergenic | 35.0% | |
| TGGCTAAGGATTATGATGTT+GGG | - | chr2_2:25281244-25281263 | Msa0245520:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+TGG | - | chr2_2:25281285-25281304 | Msa0245520:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+AGG | + | chr2_2:25281390-25281409 | None:intergenic | 35.0% | |
| TGAATTGCTTGCTCTTTATC+AGG | - | chr2_2:25281443-25281462 | Msa0245520:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_2:25281583-25281602 | Msa0245520:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_2:25281609-25281628 | Msa0245520:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_2:25281614-25281633 | None:intergenic | 35.0% | |
| !! | CAGTTGATTTGATTACTTGC+AGG | - | chr2_2:25281716-25281735 | Msa0245520:intron | 35.0% |
| AATGGCAATAGATGACATGT+TGG | - | chr2_2:25281764-25281783 | Msa0245520:intron | 35.0% | |
| !!! | CATGTTGGTGGTTTTTTCTA+TGG | - | chr2_2:25281779-25281798 | Msa0245520:intron | 35.0% |
| !!! | GTAAGGTTGCTTTTGAAAGA+AGG | - | chr2_2:25282032-25282051 | Msa0245520:CDS | 35.0% |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_2:25282325-25282344 | Msa0245520:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_2:25282361-25282380 | Msa0245520:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_2:25282475-25282494 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_2:25282634-25282653 | Msa0245520:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_2:25282686-25282705 | None:intergenic | 35.0% | |
| AGAACTTTCTTAAAGGTCGA+AGG | - | chr2_2:25282850-25282869 | Msa0245520:CDS | 35.0% | |
| ! | ATTTTTGTCATCTTGAGCAG+TGG | - | chr2_2:25283064-25283083 | Msa0245520:CDS | 35.0% |
| !! | AGAAGTGTTGAACAAGATCA+TGG | - | chr2_2:25283118-25283137 | Msa0245520:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_2:25283235-25283254 | Msa0245520:CDS | 35.0% | |
| AATGAAATCAGCAACAACAC+TGG | - | chr2_2:25280949-25280968 | Msa0245520:CDS | 35.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_2:25281006-25281025 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_2:25281057-25281076 | None:intergenic | 35.0% | |
| TGGCTAAGGATTATGATGTT+GGG | - | chr2_2:25281244-25281263 | Msa0245520:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+TGG | - | chr2_2:25281285-25281304 | Msa0245520:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+AGG | + | chr2_2:25281390-25281409 | None:intergenic | 35.0% | |
| TGAATTGCTTGCTCTTTATC+AGG | - | chr2_2:25281443-25281462 | Msa0245520:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_2:25281583-25281602 | Msa0245520:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_2:25281609-25281628 | Msa0245520:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_2:25281614-25281633 | None:intergenic | 35.0% | |
| !! | CAGTTGATTTGATTACTTGC+AGG | - | chr2_2:25281716-25281735 | Msa0245520:intron | 35.0% |
| AATGGCAATAGATGACATGT+TGG | - | chr2_2:25281764-25281783 | Msa0245520:intron | 35.0% | |
| !!! | CATGTTGGTGGTTTTTTCTA+TGG | - | chr2_2:25281779-25281798 | Msa0245520:intron | 35.0% |
| !!! | GTAAGGTTGCTTTTGAAAGA+AGG | - | chr2_2:25282032-25282051 | Msa0245520:CDS | 35.0% |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_2:25282325-25282344 | Msa0245520:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_2:25282361-25282380 | Msa0245520:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_2:25282475-25282494 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_2:25282634-25282653 | Msa0245520:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_2:25282686-25282705 | None:intergenic | 35.0% | |
| AGAACTTTCTTAAAGGTCGA+AGG | - | chr2_2:25282850-25282869 | Msa0245520:CDS | 35.0% | |
| ! | ATTTTTGTCATCTTGAGCAG+TGG | - | chr2_2:25283064-25283083 | Msa0245520:CDS | 35.0% |
| !! | AGAAGTGTTGAACAAGATCA+TGG | - | chr2_2:25283118-25283137 | Msa0245520:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_2:25283235-25283254 | Msa0245520:CDS | 35.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_2:25281118-25281137 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_2:25281176-25281195 | Msa0245520:intron | 40.0% | |
| GTGGCTAAGGATTATGATGT+TGG | - | chr2_2:25281243-25281262 | Msa0245520:intron | 40.0% | |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_2:25281586-25281605 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_2:25281615-25281634 | None:intergenic | 40.0% | |
| !!! | AGGCAGTGATTTTTCAAGAG+TGG | + | chr2_2:25281883-25281902 | None:intergenic | 40.0% |
| ACTTGTTTCACTACAGGTTG+AGG | + | chr2_2:25281903-25281922 | None:intergenic | 40.0% | |
| AAGATCAAGAAGCTCAGTAG+TGG | + | chr2_2:25282120-25282139 | None:intergenic | 40.0% | |
| ACTACTGAGCTTCTTGATCT+TGG | - | chr2_2:25282119-25282138 | Msa0245520:CDS | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_2:25282464-25282483 | Msa0245520:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+GGG | + | chr2_2:25282563-25282582 | None:intergenic | 40.0% | |
| ATTCGGGAGTAACATATGTC+AGG | + | chr2_2:25282564-25282583 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_2:25282643-25282662 | Msa0245520:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_2:25282653-25282672 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_2:25282701-25282720 | Msa0245520:intron | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_2:25282733-25282752 | Msa0245520:intron | 40.0% | |
| CACGTCAATAGGAAAGTCAA+GGG | - | chr2_2:25283304-25283323 | Msa0245520:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_2:25281118-25281137 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_2:25281176-25281195 | Msa0245520:intron | 40.0% | |
| GTGGCTAAGGATTATGATGT+TGG | - | chr2_2:25281243-25281262 | Msa0245520:intron | 40.0% | |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_2:25281586-25281605 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_2:25281615-25281634 | None:intergenic | 40.0% | |
| !!! | AGGCAGTGATTTTTCAAGAG+TGG | + | chr2_2:25281883-25281902 | None:intergenic | 40.0% |
| ACTTGTTTCACTACAGGTTG+AGG | + | chr2_2:25281903-25281922 | None:intergenic | 40.0% | |
| AAGATCAAGAAGCTCAGTAG+TGG | + | chr2_2:25282120-25282139 | None:intergenic | 40.0% | |
| ACTACTGAGCTTCTTGATCT+TGG | - | chr2_2:25282119-25282138 | Msa0245520:CDS | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_2:25282464-25282483 | Msa0245520:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+GGG | + | chr2_2:25282563-25282582 | None:intergenic | 40.0% | |
| ATTCGGGAGTAACATATGTC+AGG | + | chr2_2:25282564-25282583 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_2:25282643-25282662 | Msa0245520:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_2:25282653-25282672 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_2:25282701-25282720 | Msa0245520:intron | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_2:25282733-25282752 | Msa0245520:intron | 40.0% | |
| CACGTCAATAGGAAAGTCAA+GGG | - | chr2_2:25283304-25283323 | Msa0245520:CDS | 40.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_2:25281120-25281139 | Msa0245520:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_2:25281136-25281155 | None:intergenic | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_2:25281767-25281786 | Msa0245520:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_2:25282052-25282071 | Msa0245520:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_2:25282254-25282273 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_2:25282251-25282270 | Msa0245520:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_2:25282295-25282314 | Msa0245520:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_2:25282378-25282397 | Msa0245520:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_2:25282379-25282398 | Msa0245520:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_2:25282407-25282426 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_2:25282418-25282437 | Msa0245520:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_2:25282422-25282441 | Msa0245520:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_2:25282423-25282442 | Msa0245520:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_2:25282424-25282443 | Msa0245520:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_2:25282652-25282671 | Msa0245520:intron | 45.0% | |
| TCAAGTCCATAGTTGTCCTC+TGG | + | chr2_2:25282730-25282749 | None:intergenic | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_2:25282775-25282794 | Msa0245520:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_2:25283071-25283090 | Msa0245520:CDS | 45.0% | |
| TTCAACACTTCTGAGCAACG+AGG | + | chr2_2:25283110-25283129 | None:intergenic | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_2:25283253-25283272 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_2:25283293-25283312 | Msa0245520:CDS | 45.0% | |
| CTTTCCTATTGACGTGGATG+AGG | + | chr2_2:25283300-25283319 | None:intergenic | 45.0% | |
| CCTTGACTTTCCTATTGACG+TGG | + | chr2_2:25283306-25283325 | None:intergenic | 45.0% | |
| CCACGTCAATAGGAAAGTCA+AGG | - | chr2_2:25283303-25283322 | Msa0245520:CDS | 45.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_2:25281120-25281139 | Msa0245520:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_2:25281136-25281155 | None:intergenic | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_2:25281767-25281786 | Msa0245520:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_2:25282052-25282071 | Msa0245520:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_2:25282254-25282273 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_2:25282251-25282270 | Msa0245520:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_2:25282295-25282314 | Msa0245520:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_2:25282378-25282397 | Msa0245520:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_2:25282379-25282398 | Msa0245520:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_2:25282407-25282426 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_2:25282418-25282437 | Msa0245520:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_2:25282422-25282441 | Msa0245520:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_2:25282423-25282442 | Msa0245520:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_2:25282424-25282443 | Msa0245520:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_2:25282652-25282671 | Msa0245520:intron | 45.0% | |
| TCAAGTCCATAGTTGTCCTC+TGG | + | chr2_2:25282730-25282749 | None:intergenic | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_2:25282775-25282794 | Msa0245520:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_2:25283071-25283090 | Msa0245520:CDS | 45.0% | |
| TTCAACACTTCTGAGCAACG+AGG | + | chr2_2:25283110-25283129 | None:intergenic | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_2:25283253-25283272 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_2:25283293-25283312 | Msa0245520:CDS | 45.0% | |
| CTTTCCTATTGACGTGGATG+AGG | + | chr2_2:25283300-25283319 | None:intergenic | 45.0% | |
| CCTTGACTTTCCTATTGACG+TGG | + | chr2_2:25283306-25283325 | None:intergenic | 45.0% | |
| CCACGTCAATAGGAAAGTCA+AGG | - | chr2_2:25283303-25283322 | Msa0245520:CDS | 45.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_2:25281054-25281073 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_2:25281142-25281161 | Msa0245520:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_2:25281164-25281183 | None:intergenic | 50.0% | |
| AGAAACGACGCTGCAACTGA+AGG | - | chr2_2:25281218-25281237 | Msa0245520:intron | 50.0% | |
| GCAACTGAAGGAAGTGGCTA+AGG | - | chr2_2:25281230-25281249 | Msa0245520:intron | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_2:25281544-25281563 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_2:25281545-25281564 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_2:25281546-25281565 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_2:25281543-25281562 | Msa0245520:CDS | 50.0% | |
| AAAATGGTGAGACCCCATGC+AGG | + | chr2_2:25281570-25281589 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_2:25282392-25282411 | Msa0245520:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_2:25282397-25282416 | Msa0245520:CDS | 50.0% | |
| CTCTGGCAACCACCCAAATT+CGG | + | chr2_2:25282713-25282732 | None:intergenic | 50.0% | |
| TGGTTGCCAGAGGACAACTA+TGG | - | chr2_2:25282721-25282740 | Msa0245520:intron | 50.0% | |
| !! | ATGAAGGCGTTGTCTAGAGC+AGG | - | chr2_2:25282791-25282810 | Msa0245520:intron | 50.0% |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_2:25283070-25283089 | Msa0245520:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_2:25283072-25283091 | Msa0245520:CDS | 50.0% | |
| TGCAAGCTGCGATAGGTCAT+CGG | + | chr2_2:25283147-25283166 | None:intergenic | 50.0% | |
| CTATCGCAGCTTGCATGCAT+GGG | - | chr2_2:25283152-25283171 | Msa0245520:CDS | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_2:25283188-25283207 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_2:25283189-25283208 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_2:25283244-25283263 | Msa0245520:CDS | 50.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_2:25281054-25281073 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_2:25281142-25281161 | Msa0245520:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_2:25281164-25281183 | None:intergenic | 50.0% | |
| AGAAACGACGCTGCAACTGA+AGG | - | chr2_2:25281218-25281237 | Msa0245520:intron | 50.0% | |
| GCAACTGAAGGAAGTGGCTA+AGG | - | chr2_2:25281230-25281249 | Msa0245520:intron | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_2:25281544-25281563 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_2:25281545-25281564 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_2:25281546-25281565 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_2:25281543-25281562 | Msa0245520:CDS | 50.0% | |
| AAAATGGTGAGACCCCATGC+AGG | + | chr2_2:25281570-25281589 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_2:25282392-25282411 | Msa0245520:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_2:25282397-25282416 | Msa0245520:CDS | 50.0% | |
| CTCTGGCAACCACCCAAATT+CGG | + | chr2_2:25282713-25282732 | None:intergenic | 50.0% | |
| TGGTTGCCAGAGGACAACTA+TGG | - | chr2_2:25282721-25282740 | Msa0245520:intron | 50.0% | |
| !! | ATGAAGGCGTTGTCTAGAGC+AGG | - | chr2_2:25282791-25282810 | Msa0245520:intron | 50.0% |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_2:25283070-25283089 | Msa0245520:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_2:25283072-25283091 | Msa0245520:CDS | 50.0% | |
| TGCAAGCTGCGATAGGTCAT+CGG | + | chr2_2:25283147-25283166 | None:intergenic | 50.0% | |
| CTATCGCAGCTTGCATGCAT+GGG | - | chr2_2:25283152-25283171 | Msa0245520:CDS | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_2:25283188-25283207 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_2:25283189-25283208 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_2:25283244-25283263 | Msa0245520:CDS | 50.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_2:25281160-25281179 | Msa0245520:CDS | 55.0% |
| GACGCTGCAACTGAAGGAAG+TGG | - | chr2_2:25281224-25281243 | Msa0245520:intron | 55.0% | |
| CTGCCCCGTGCACTAAAACT+AGG | - | chr2_2:25281538-25281557 | Msa0245520:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_2:25281542-25281561 | Msa0245520:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+TGG | - | chr2_2:25281553-25281572 | Msa0245520:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAT+GGG | - | chr2_2:25281554-25281573 | Msa0245520:CDS | 55.0% | |
| CGAATTTGGGTGGTTGCCAG+AGG | - | chr2_2:25282711-25282730 | Msa0245520:intron | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_2:25283078-25283097 | Msa0245520:CDS | 55.0% | |
| CCATGCATGCAAGCTGCGAT+AGG | + | chr2_2:25283154-25283173 | None:intergenic | 55.0% | |
| CCTATCGCAGCTTGCATGCA+TGG | - | chr2_2:25283151-25283170 | Msa0245520:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_2:25283199-25283218 | Msa0245520:CDS | 55.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_2:25281160-25281179 | Msa0245520:CDS | 55.0% |
| GACGCTGCAACTGAAGGAAG+TGG | - | chr2_2:25281224-25281243 | Msa0245520:intron | 55.0% | |
| CTGCCCCGTGCACTAAAACT+AGG | - | chr2_2:25281538-25281557 | Msa0245520:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_2:25281542-25281561 | Msa0245520:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+TGG | - | chr2_2:25281553-25281572 | Msa0245520:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAT+GGG | - | chr2_2:25281554-25281573 | Msa0245520:CDS | 55.0% | |
| CGAATTTGGGTGGTTGCCAG+AGG | - | chr2_2:25282711-25282730 | Msa0245520:intron | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_2:25283078-25283097 | Msa0245520:CDS | 55.0% | |
| CCATGCATGCAAGCTGCGAT+AGG | + | chr2_2:25283154-25283173 | None:intergenic | 55.0% | |
| CCTATCGCAGCTTGCATGCA+TGG | - | chr2_2:25283151-25283170 | Msa0245520:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_2:25283199-25283218 | Msa0245520:CDS | 55.0% | |
| ACTAGGCAGGGTCCTGCATG+GGG | - | chr2_2:25281555-25281574 | Msa0245520:CDS | 60.0% | |
| ACTAGGCAGGGTCCTGCATG+GGG | - | chr2_2:25281555-25281574 | Msa0245520:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 25280913 | 25283358 | 25280913 | ID=Msa0245520;Name=Msa0245520 |
| chr2_2 | mRNA | 25280913 | 25283358 | 25280913 | ID=Msa0245520-mRNA-1;Parent=Msa0245520;Name=Msa0245520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|586 |
| chr2_2 | exon | 25282807 | 25283358 | 25282807 | ID=Msa0245520-mRNA-1:exon:9516;Parent=Msa0245520-mRNA-1 |
| chr2_2 | exon | 25281786 | 25282533 | 25281786 | ID=Msa0245520-mRNA-1:exon:9515;Parent=Msa0245520-mRNA-1 |
| chr2_2 | exon | 25281459 | 25281644 | 25281459 | ID=Msa0245520-mRNA-1:exon:9514;Parent=Msa0245520-mRNA-1 |
| chr2_2 | exon | 25280913 | 25281187 | 25280913 | ID=Msa0245520-mRNA-1:exon:9513;Parent=Msa0245520-mRNA-1 |
| chr2_2 | CDS | 25282807 | 25283358 | 25282807 | ID=Msa0245520-mRNA-1:cds;Parent=Msa0245520-mRNA-1 |
| chr2_2 | CDS | 25281786 | 25282533 | 25281786 | ID=Msa0245520-mRNA-1:cds;Parent=Msa0245520-mRNA-1 |
| chr2_2 | CDS | 25281459 | 25281644 | 25281459 | ID=Msa0245520-mRNA-1:cds;Parent=Msa0245520-mRNA-1 |
| chr2_2 | CDS | 25280913 | 25281187 | 25280913 | ID=Msa0245520-mRNA-1:cds;Parent=Msa0245520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
