Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245590 | XP_003595230.1 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245590 | sp|P42158|CKL1_ARATH | 83.891 | 329 | 53 | 0 | 1 | 329 | 1 | 329 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245590 | A2Q686 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245590 | MtrunA17_Chr2g0299661 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 689 |
| Msa0245590 | MtrunA17_Chr4g0071031 | 88.450 | 329 | 38 | 0 | 1 | 329 | 1 | 329 | 0.0 | 622 |
| Msa0245590 | MtrunA17_Chr2g0329981 | 85.015 | 327 | 49 | 0 | 1 | 327 | 1 | 327 | 0.0 | 603 |
| Msa0245590 | MtrunA17_Chr8g0342821 | 84.049 | 326 | 51 | 1 | 1 | 326 | 1 | 325 | 0.0 | 591 |
| Msa0245590 | MtrunA17_Chr1g0166821 | 73.502 | 317 | 82 | 1 | 1 | 315 | 2 | 318 | 7.61e-179 | 503 |
| Msa0245590 | MtrunA17_Chr1g0183631 | 75.168 | 298 | 74 | 0 | 1 | 298 | 1 | 298 | 1.57e-178 | 501 |
| Msa0245590 | MtrunA17_Chr7g0261501 | 69.419 | 327 | 96 | 1 | 1 | 323 | 1 | 327 | 2.13e-177 | 499 |
| Msa0245590 | MtrunA17_Chr1g0187571 | 69.811 | 318 | 92 | 2 | 1 | 315 | 2 | 318 | 1.12e-172 | 487 |
| Msa0245590 | MtrunA17_Chr6g0486611 | 73.579 | 299 | 79 | 0 | 1 | 299 | 1 | 299 | 3.14e-171 | 482 |
| Msa0245590 | MtrunA17_Chr8g0390211 | 68.278 | 331 | 90 | 2 | 1 | 329 | 1 | 318 | 6.83e-171 | 481 |
| Msa0245590 | MtrunA17_Chr1g0146151 | 67.188 | 320 | 98 | 1 | 1 | 313 | 1 | 320 | 8.64e-164 | 463 |
| Msa0245590 | MtrunA17_Chr3g0140071 | 70.847 | 295 | 86 | 0 | 1 | 295 | 1 | 295 | 9.81e-162 | 458 |
| Msa0245590 | MtrunA17_Chr1g0167261 | 67.434 | 304 | 97 | 1 | 1 | 302 | 2 | 305 | 2.27e-156 | 441 |
| Msa0245590 | MtrunA17_Chr7g0214531 | 37.809 | 283 | 159 | 5 | 9 | 277 | 37 | 316 | 5.73e-61 | 204 |
| Msa0245590 | MtrunA17_Chr3g0140431 | 39.194 | 273 | 155 | 5 | 9 | 273 | 38 | 307 | 9.94e-60 | 201 |
| Msa0245590 | MtrunA17_Chr1g0146301 | 38.462 | 273 | 157 | 5 | 9 | 273 | 124 | 393 | 1.75e-58 | 199 |
| Msa0245590 | MtrunA17_Chr1g0213321 | 37.410 | 278 | 162 | 5 | 9 | 277 | 119 | 393 | 1.91e-57 | 196 |
| Msa0245590 | MtrunA17_Chr7g0253211 | 37.847 | 288 | 161 | 6 | 4 | 276 | 317 | 601 | 2.99e-57 | 198 |
| Msa0245590 | MtrunA17_Chr8g0340491 | 36.429 | 280 | 160 | 6 | 9 | 273 | 128 | 404 | 2.06e-52 | 183 |
| Msa0245590 | MtrunA17_Chr5g0405421 | 25.792 | 221 | 144 | 7 | 2 | 213 | 92 | 301 | 1.22e-13 | 71.6 |
| Msa0245590 | MtrunA17_Chr7g0245031 | 28.968 | 252 | 154 | 12 | 3 | 243 | 141 | 378 | 1.98e-13 | 70.9 |
| Msa0245590 | MtrunA17_Chr4g0075541 | 26.316 | 285 | 176 | 10 | 11 | 282 | 89 | 352 | 2.12e-13 | 70.5 |
| Msa0245590 | MtrunA17_Chr2g0333821 | 29.091 | 220 | 130 | 10 | 7 | 215 | 12 | 216 | 1.93e-12 | 67.8 |
| Msa0245590 | MtrunA17_Chr7g0274941 | 24.766 | 214 | 145 | 5 | 8 | 215 | 15 | 218 | 2.29e-12 | 66.6 |
| Msa0245590 | MtrunA17_Chr1g0205931 | 26.364 | 220 | 135 | 8 | 8 | 213 | 54 | 260 | 2.68e-12 | 67.8 |
| Msa0245590 | MtrunA17_Chr3g0107011 | 28.972 | 214 | 134 | 8 | 8 | 214 | 13 | 215 | 3.34e-12 | 67.0 |
| Msa0245590 | MtrunA17_Chr5g0432471 | 29.787 | 235 | 134 | 12 | 8 | 230 | 11 | 226 | 5.75e-12 | 66.2 |
| Msa0245590 | MtrunA17_Chr3g0127571 | 28.755 | 233 | 122 | 12 | 3 | 213 | 132 | 342 | 1.38e-11 | 65.5 |
| Msa0245590 | MtrunA17_Chr8g0387671 | 31.628 | 215 | 123 | 10 | 9 | 213 | 66 | 266 | 2.83e-11 | 64.3 |
| Msa0245590 | MtrunA17_Chr1g0203881 | 24.891 | 229 | 151 | 7 | 7 | 228 | 39 | 253 | 3.04e-11 | 64.3 |
| Msa0245590 | MtrunA17_Chr8g0374701 | 26.068 | 234 | 130 | 8 | 3 | 213 | 119 | 332 | 7.55e-11 | 63.2 |
| Msa0245590 | MtrunA17_Chr1g0173541 | 26.638 | 229 | 128 | 9 | 3 | 213 | 46 | 252 | 8.97e-11 | 62.8 |
| Msa0245590 | MtrunA17_Chr3g0140631 | 25.106 | 235 | 146 | 9 | 3 | 228 | 31 | 244 | 9.14e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245590 | AT4G26100.1 | 83.891 | 329 | 53 | 0 | 1 | 329 | 1 | 329 | 0.0 | 600 |
| Msa0245590 | AT1G72710.1 | 83.180 | 327 | 54 | 1 | 1 | 327 | 1 | 326 | 0.0 | 583 |
| Msa0245590 | AT5G57015.1 | 81.459 | 329 | 60 | 1 | 1 | 328 | 1 | 329 | 0.0 | 581 |
| Msa0245590 | AT2G19470.1 | 76.453 | 327 | 77 | 0 | 1 | 327 | 1 | 327 | 0.0 | 545 |
| Msa0245590 | AT5G44100.1 | 75.758 | 297 | 72 | 0 | 1 | 297 | 1 | 297 | 1.12e-178 | 503 |
| Msa0245590 | AT5G44100.2 | 75.758 | 297 | 72 | 0 | 1 | 297 | 1 | 297 | 1.12e-178 | 503 |
| Msa0245590 | AT1G03930.1 | 74.747 | 297 | 75 | 0 | 1 | 297 | 1 | 297 | 1.33e-177 | 500 |
| Msa0245590 | AT3G23340.1 | 73.355 | 304 | 81 | 0 | 1 | 304 | 1 | 304 | 3.75e-177 | 498 |
| Msa0245590 | AT4G28540.1 | 66.366 | 333 | 105 | 1 | 1 | 326 | 5 | 337 | 3.42e-172 | 487 |
| Msa0245590 | AT4G14340.2 | 72.727 | 297 | 81 | 0 | 1 | 297 | 7 | 303 | 3.26e-171 | 480 |
| Msa0245590 | AT4G14340.1 | 72.727 | 297 | 81 | 0 | 1 | 297 | 7 | 303 | 5.73e-171 | 483 |
| Msa0245590 | AT1G04440.1 | 73.401 | 297 | 79 | 0 | 1 | 297 | 1 | 297 | 1.63e-170 | 482 |
| Msa0245590 | AT4G28880.3 | 72.910 | 299 | 81 | 0 | 1 | 299 | 1 | 299 | 3.40e-170 | 479 |
| Msa0245590 | AT4G28880.2 | 72.910 | 299 | 81 | 0 | 1 | 299 | 1 | 299 | 3.40e-170 | 479 |
| Msa0245590 | AT4G28880.1 | 72.910 | 299 | 81 | 0 | 1 | 299 | 1 | 299 | 3.40e-170 | 479 |
| Msa0245590 | AT4G28880.4 | 72.910 | 299 | 81 | 0 | 1 | 299 | 1 | 299 | 3.40e-170 | 479 |
| Msa0245590 | AT4G28860.2 | 67.791 | 326 | 102 | 1 | 1 | 326 | 1 | 323 | 1.12e-169 | 476 |
| Msa0245590 | AT5G43320.1 | 72.391 | 297 | 82 | 0 | 1 | 297 | 1 | 297 | 2.74e-169 | 479 |
| Msa0245590 | AT4G28860.1 | 67.791 | 326 | 102 | 1 | 1 | 326 | 1 | 323 | 7.33e-169 | 476 |
| Msa0245590 | AT5G43320.2 | 72.391 | 297 | 82 | 0 | 1 | 297 | 1 | 297 | 1.65e-168 | 473 |
| Msa0245590 | AT5G43320.3 | 72.391 | 297 | 82 | 0 | 1 | 297 | 1 | 297 | 1.65e-168 | 473 |
| Msa0245590 | AT3G23340.2 | 73.592 | 284 | 75 | 0 | 21 | 304 | 7 | 290 | 1.49e-164 | 466 |
| Msa0245590 | AT4G08800.1 | 65.677 | 303 | 72 | 2 | 1 | 303 | 1 | 271 | 6.02e-148 | 418 |
| Msa0245590 | AT2G25760.2 | 38.676 | 287 | 159 | 5 | 4 | 273 | 100 | 386 | 8.78e-62 | 208 |
| Msa0245590 | AT2G25760.1 | 38.676 | 287 | 156 | 6 | 4 | 273 | 100 | 383 | 3.52e-60 | 204 |
| Msa0245590 | AT5G18190.2 | 38.062 | 289 | 161 | 6 | 4 | 277 | 123 | 408 | 4.49e-58 | 199 |
| Msa0245590 | AT5G18190.1 | 38.062 | 289 | 161 | 6 | 4 | 277 | 123 | 408 | 4.49e-58 | 199 |
| Msa0245590 | AT3G03940.1 | 38.408 | 289 | 160 | 6 | 4 | 277 | 133 | 418 | 5.02e-58 | 199 |
| Msa0245590 | AT3G13670.1 | 36.749 | 283 | 162 | 5 | 9 | 277 | 137 | 416 | 9.73e-58 | 198 |
| Msa0245590 | AT2G25090.1 | 29.018 | 224 | 130 | 10 | 7 | 213 | 13 | 224 | 2.03e-12 | 68.2 |
| Msa0245590 | AT1G61950.1 | 25.000 | 300 | 194 | 13 | 5 | 293 | 94 | 373 | 3.18e-12 | 67.8 |
| Msa0245590 | AT1G62400.1 | 25.614 | 285 | 178 | 10 | 11 | 282 | 88 | 351 | 6.72e-12 | 66.2 |
| Msa0245590 | AT1G12580.1 | 24.686 | 239 | 159 | 7 | 7 | 238 | 42 | 266 | 1.02e-11 | 66.2 |
| Msa0245590 | AT2G17890.1 | 24.766 | 214 | 145 | 7 | 7 | 213 | 106 | 310 | 1.18e-11 | 65.9 |
| Msa0245590 | AT5G25110.1 | 27.854 | 219 | 130 | 10 | 8 | 214 | 42 | 244 | 1.69e-11 | 65.5 |
| Msa0245590 | AT2G25880.4 | 25.738 | 237 | 148 | 9 | 2 | 230 | 31 | 247 | 1.77e-11 | 64.3 |
| Msa0245590 | AT4G23650.1 | 30.531 | 226 | 115 | 12 | 9 | 215 | 78 | 280 | 2.89e-11 | 64.7 |
| Msa0245590 | AT3G06030.1 | 26.818 | 220 | 134 | 9 | 8 | 213 | 67 | 273 | 2.95e-11 | 64.7 |
| Msa0245590 | AT2G25880.1 | 25.738 | 237 | 148 | 9 | 2 | 230 | 18 | 234 | 2.97e-11 | 63.5 |
| Msa0245590 | AT5G58950.1 | 24.399 | 291 | 183 | 11 | 7 | 281 | 205 | 474 | 3.01e-11 | 64.7 |
| Msa0245590 | AT2G25880.3 | 25.738 | 237 | 148 | 9 | 2 | 230 | 79 | 295 | 3.08e-11 | 63.9 |
| Msa0245590 | AT5G58380.1 | 30.000 | 220 | 126 | 11 | 7 | 214 | 10 | 213 | 3.81e-11 | 64.3 |
| Msa0245590 | AT2G17290.1 | 27.753 | 227 | 125 | 8 | 9 | 217 | 85 | 290 | 3.82e-11 | 64.3 |
| Msa0245590 | AT2G17290.2 | 27.753 | 227 | 125 | 8 | 9 | 217 | 85 | 290 | 3.82e-11 | 64.3 |
| Msa0245590 | AT2G38910.1 | 26.400 | 250 | 155 | 10 | 9 | 242 | 134 | 370 | 5.70e-11 | 63.9 |
| Msa0245590 | AT3G50530.1 | 25.652 | 230 | 133 | 7 | 3 | 213 | 142 | 352 | 7.20e-11 | 63.5 |
| Msa0245590 | AT5G50180.1 | 24.382 | 283 | 186 | 11 | 11 | 281 | 22 | 288 | 7.47e-11 | 62.8 |
Find 78 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCCAAACCATTTAATATT+TGG | 0.121812 | 2_2:+25367322 | None:intergenic |
| CTGGGATTCCAAATATTAAA+TGG | 0.220549 | 2_2:-25367330 | Msa0245590:CDS |
| TGTTAAGAATTTGAAGAAAA+AGG | 0.235802 | 2_2:+25370470 | None:intergenic |
| TCATTCGGAGAGATCTATTT+AGG | 0.249141 | 2_2:-25370255 | Msa0245590:intron |
| TCCATTATTGCCGGTCATTA+AGG | 0.259862 | 2_2:-25364926 | Msa0245590:CDS |
| TAGGTTTACTGTATTGATTT+TGG | 0.282532 | 2_2:-25366894 | Msa0245590:CDS |
| ACCTTAATGACCGGCAATAA+TGG | 0.283364 | 2_2:+25364925 | None:intergenic |
| GATCAATGAACACAATTTCT+TGG | 0.291367 | 2_2:-25370418 | Msa0245590:five_prime_UTR |
| CTTAATGCTGGAACTAGTTC+TGG | 0.302221 | 2_2:-25364540 | Msa0245590:CDS |
| ATTCCAAATATTAAATGGTT+TGG | 0.317069 | 2_2:-25367325 | Msa0245590:CDS |
| CCCATCAACACATTCCTTAC+AGG | 0.339922 | 2_2:-25366842 | Msa0245590:intron |
| ATGTCTTGATGTACTTCCTC+AGG | 0.377055 | 2_2:-25365263 | Msa0245590:CDS |
| GATAATTTCCTCATGGGCTT+GGG | 0.378614 | 2_2:-25367017 | Msa0245590:CDS |
| AGATAATTTCCTCATGGGCT+TGG | 0.386906 | 2_2:-25367018 | Msa0245590:CDS |
| AGTCTGATTACATCTTTGAT+TGG | 0.394143 | 2_2:-25364702 | Msa0245590:CDS |
| GGTCATTAAGGTTTGATGAT+AGG | 0.395299 | 2_2:-25364914 | Msa0245590:CDS |
| AAGCCCATGAGGAAATTATC+TGG | 0.401745 | 2_2:+25367020 | None:intergenic |
| TTTGAATGGAACGTCGCGTT+GGG | 0.404069 | 2_2:-25370314 | Msa0245590:exon |
| CATCATACTTCCATTATTGC+CGG | 0.415822 | 2_2:-25364935 | Msa0245590:CDS |
| TCAAACCTTCACGAATAAAC+AGG | 0.424318 | 2_2:+25364856 | None:intergenic |
| AAGAAATTGTGTTCATTGAT+CGG | 0.445249 | 2_2:+25370420 | None:intergenic |
| CTTGGGAAAGCGGGAAAACC+AGG | 0.448025 | 2_2:-25367000 | Msa0245590:intron |
| ATTCTAAATCGCTTCTCCAC+CGG | 0.454371 | 2_2:-25367052 | Msa0245590:CDS |
| TTCTAAATCGCTTCTCCACC+GGG | 0.469845 | 2_2:-25367051 | Msa0245590:CDS |
| AAGATCGGTAGTGGCTCATT+CGG | 0.470396 | 2_2:-25370270 | Msa0245590:CDS |
| TTCTGGAATCCCTCCTGCTA+TGG | 0.472854 | 2_2:-25364523 | Msa0245590:CDS |
| ATATGCAGTCTTCCTTGGCA+AGG | 0.473214 | 2_2:-25365144 | Msa0245590:intron |
| CCTCATGGGCTTGGGAAAGC+GGG | 0.474186 | 2_2:-25367009 | Msa0245590:CDS |
| TCTCATGCTTGCTGAGCAAA+TGG | 0.476304 | 2_2:-25367203 | Msa0245590:intron |
| GAAGGTTTCTACTTCGATTG+AGG | 0.478929 | 2_2:-25365073 | Msa0245590:intron |
| ACCTGTAAGGAATGTGTTGA+TGG | 0.480755 | 2_2:+25366841 | None:intergenic |
| CGAGAAAATCAGTGAAAAGA+AGG | 0.488049 | 2_2:-25365091 | Msa0245590:CDS |
| TATTAAATGGTTTGGAGTGG+AGG | 0.500434 | 2_2:-25367317 | Msa0245590:CDS |
| AATTATCTGGTTTAATATCC+CGG | 0.500662 | 2_2:+25367033 | None:intergenic |
| ACTAAATCATCATACCTGTA+AGG | 0.509141 | 2_2:+25366828 | None:intergenic |
| TATGCAGTCTTCCTTGGCAA+GGG | 0.512407 | 2_2:-25365143 | Msa0245590:intron |
| AAACCAGATAATTTCCTCAT+GGG | 0.512524 | 2_2:-25367023 | Msa0245590:CDS |
| CGAGACCTGTTTATTCGTGA+AGG | 0.514655 | 2_2:-25364861 | Msa0245590:intron |
| TAAACCAGATAATTTCCTCA+TGG | 0.520433 | 2_2:-25367024 | Msa0245590:CDS |
| TAAGCGTTGAAATTAGCGTA+AGG | 0.521507 | 2_2:-25370345 | Msa0245590:five_prime_UTR |
| AGAGATGATTTAGAGTCTGT+TGG | 0.523766 | 2_2:-25365288 | Msa0245590:CDS |
| TCCTCATGGGCTTGGGAAAG+CGG | 0.524897 | 2_2:-25367010 | Msa0245590:CDS |
| ATGAATACCCACCTTGGCAT+TGG | 0.525454 | 2_2:-25365429 | Msa0245590:intron |
| ATTAAATGGTTTGGAGTGGA+GGG | 0.526860 | 2_2:-25367316 | Msa0245590:CDS |
| AATCAAAGATGTAATCAGAC+TGG | 0.530027 | 2_2:+25364704 | None:intergenic |
| TTGCAGCATTCTGTACAACT+TGG | 0.530609 | 2_2:+25367492 | None:intergenic |
| TTTCGTGTTGGTCGTAAGAT+CGG | 0.535668 | 2_2:-25370285 | Msa0245590:CDS |
| CTATTAGCATTAGCCATAGC+AGG | 0.539572 | 2_2:+25364510 | None:intergenic |
| GTTGGTCGTAAGATCGGTAG+TGG | 0.549271 | 2_2:-25370279 | Msa0245590:CDS |
| GTTGGGAATAAGTTTCGTGT+TGG | 0.550273 | 2_2:-25370297 | Msa0245590:CDS |
| AAATATTAAATGGTTTGGAG+TGG | 0.550968 | 2_2:-25367320 | Msa0245590:CDS |
| AAGCGTTGAAATTAGCGTAA+GGG | 0.552261 | 2_2:-25370344 | Msa0245590:five_prime_UTR |
| TGTCTTGATGTACTTCCTCA+GGG | 0.554527 | 2_2:-25365262 | Msa0245590:CDS |
| AGATTACAATGTTCTAGTAA+TGG | 0.562002 | 2_2:-25367293 | Msa0245590:CDS |
| GTTCTAGTAATGGATCTGCT+TGG | 0.563049 | 2_2:-25367283 | Msa0245590:CDS |
| TATCATCAAACCTTAATGAC+CGG | 0.570464 | 2_2:+25364916 | None:intergenic |
| CGTATATACCAATGCCAAGG+TGG | 0.570539 | 2_2:+25365421 | None:intergenic |
| CGTGCTTGAAGCCCTTGCCA+AGG | 0.576416 | 2_2:+25365132 | None:intergenic |
| AAGTATGATGCAAACTCTGT+TGG | 0.578562 | 2_2:+25364948 | None:intergenic |
| TTAAACATCTCTTCAAGACT+AGG | 0.585069 | 2_2:+25367259 | None:intergenic |
| CCACTTACGATAGCACGTGC+TGG | 0.587245 | 2_2:+25364640 | None:intergenic |
| CCCGCTTTCCCAAGCCCATG+AGG | 0.590879 | 2_2:+25367009 | None:intergenic |
| GTATTCCAGGCCTTGTGTCG+AGG | 0.592620 | 2_2:-25364975 | Msa0245590:intron |
| TGATGTACTTCCTCAGGGGA+AGG | 0.612571 | 2_2:-25365257 | Msa0245590:intron |
| TGTTGGATAACCTCGACACA+AGG | 0.638443 | 2_2:+25364965 | None:intergenic |
| TTAGCATTAGCCATAGCAGG+AGG | 0.649368 | 2_2:+25364513 | None:intergenic |
| GTATATACCAATGCCAAGGT+GGG | 0.649447 | 2_2:+25365422 | None:intergenic |
| GCTAGCATGAATACCCACCT+TGG | 0.649536 | 2_2:-25365435 | Msa0245590:CDS |
| GATCGTATATACCAATGCCA+AGG | 0.650591 | 2_2:+25365418 | None:intergenic |
| TAGCATTAGCCATAGCAGGA+GGG | 0.651919 | 2_2:+25364514 | None:intergenic |
| GCTAATGCTAATAGACACAC+AGG | 0.661257 | 2_2:-25364501 | None:intergenic |
| TTGGACTCATACAGCAACTG+AGG | 0.668956 | 2_2:+25367511 | None:intergenic |
| CCTGTAAGGAATGTGTTGAT+GGG | 0.670053 | 2_2:+25366842 | None:intergenic |
| GTCTTGATGTACTTCCTCAG+GGG | 0.674830 | 2_2:-25365261 | Msa0245590:CDS |
| CTTACGATAGCACGTGCTGG+AGG | 0.677704 | 2_2:+25364643 | None:intergenic |
| AAGTTGTACAGAATGCTGCA+AGG | 0.682633 | 2_2:-25367490 | Msa0245590:CDS |
| GTAATAATCACCTTCCCCTG+AGG | 0.710232 | 2_2:+25365247 | None:intergenic |
| TATCTGGTTTAATATCCCGG+TGG | 0.734033 | 2_2:+25367036 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATCATTGTATAAAT+AGG | + | chr2_2:25367834-25367853 | None:intergenic | 10.0% |
| !!! | TAAAATAAAAAATACCATTT+TGG | - | chr2_2:25369110-25369129 | Msa0245590:intron | 10.0% |
| !!! | AATTTGTTAGATTTTTGTAT+TGG | - | chr2_2:25364996-25365015 | Msa0245590:intron | 15.0% |
| !!! | TTTTCAAGCATTAAAAAAAA+AGG | - | chr2_2:25366254-25366273 | Msa0245590:intron | 15.0% |
| !! | GGTAATAATTAATTAATTGT+TGG | + | chr2_2:25366594-25366613 | None:intergenic | 15.0% |
| !!! | TATAAGAATTTTGAATAGAA+AGG | + | chr2_2:25366881-25366900 | None:intergenic | 15.0% |
| !!! | TAACAAAAGTTTATTTTCTT+TGG | + | chr2_2:25366999-25367018 | None:intergenic | 15.0% |
| !! | TTCATTATTTAATCACTTAA+AGG | - | chr2_2:25367046-25367065 | Msa0245590:CDS | 15.0% |
| !!! | ACTCAATTTTAATAATTTTG+CGG | + | chr2_2:25367288-25367307 | None:intergenic | 15.0% |
| !! | TATATTCATGTTCATATATT+AGG | - | chr2_2:25368064-25368083 | Msa0245590:intron | 15.0% |
| !! | ATTAGGCATTTATTATATAT+TGG | - | chr2_2:25368081-25368100 | Msa0245590:intron | 15.0% |
| !!! | TTATATATTGGTTTATATGT+AGG | - | chr2_2:25368093-25368112 | Msa0245590:intron | 15.0% |
| !!! | TTTTTGTAAATATCAAATAG+AGG | - | chr2_2:25369148-25369167 | Msa0245590:intron | 15.0% |
| !!! | TAATCTCTTATAGTTTTTAT+AGG | + | chr2_2:25369196-25369215 | None:intergenic | 15.0% |
| !! | ATAAATATATGATATATGAG+AGG | - | chr2_2:25369243-25369262 | Msa0245590:intron | 15.0% |
| !!! | AAATTGATTCATTATCATAT+TGG | - | chr2_2:25370264-25370283 | Msa0245590:CDS | 15.0% |
| !! | TGTTAAGAATTTGAAGAAAA+AGG | + | chr2_2:25364539-25364558 | None:intergenic | 20.0% |
| !! | AATTTGAACTATGAAGAAAA+GGG | - | chr2_2:25364971-25364990 | Msa0245590:intron | 20.0% |
| !! | TACAAATTATTGTGAAATAG+CGG | - | chr2_2:25365556-25365575 | Msa0245590:intron | 20.0% |
| !!! | ATTTTTAGACTCAAAGTTTT+TGG | + | chr2_2:25365728-25365747 | None:intergenic | 20.0% |
| !!! | TTTTAAGGTGAAATAGTAAA+AGG | + | chr2_2:25366733-25366752 | None:intergenic | 20.0% |
| !! | TTGATTAATTGTAATATGCA+TGG | + | chr2_2:25366831-25366850 | None:intergenic | 20.0% |
| !! | ATGAATAAATTAGAGAAACT+CGG | + | chr2_2:25367031-25367050 | None:intergenic | 20.0% |
| !!! | TACATTATTTTGTTAGAAAC+TGG | + | chr2_2:25367166-25367185 | None:intergenic | 20.0% |
| !! | AAGTTATATGCTTATGAAAA+CGG | + | chr2_2:25367554-25367573 | None:intergenic | 20.0% |
| !! | ATTCCAAATATTAAATGGTT+TGG | - | chr2_2:25367681-25367700 | Msa0245590:intron | 20.0% |
| !! | TTAACTTACTATTAGTTCAA+TGG | + | chr2_2:25367876-25367895 | None:intergenic | 20.0% |
| !! | TGAATATACAATACATTAGA+AGG | + | chr2_2:25368052-25368071 | None:intergenic | 20.0% |
| !! | TTAAAATGTTACAGCTATAT+TGG | + | chr2_2:25368298-25368317 | None:intergenic | 20.0% |
| !!! | AGTTTTCTTTATAAGTCAAA+AGG | + | chr2_2:25368826-25368845 | None:intergenic | 20.0% |
| !! | TATATTGAAAAAGACTAATG+AGG | - | chr2_2:25368845-25368864 | Msa0245590:intron | 20.0% |
| !!! | AAGATTTTGAATGAATGTTT+TGG | - | chr2_2:25368962-25368981 | Msa0245590:intron | 20.0% |
| !! | TATTCAACTTATTAATCTCT+AGG | + | chr2_2:25369226-25369245 | None:intergenic | 20.0% |
| !! | ATAAAATTAGGGTCTAAATA+TGG | + | chr2_2:25369436-25369455 | None:intergenic | 20.0% |
| !! | AACTAGGCTATATAAAATTA+GGG | + | chr2_2:25369447-25369466 | None:intergenic | 20.0% |
| !! | AAACTAGGCTATATAAAATT+AGG | + | chr2_2:25369448-25369467 | None:intergenic | 20.0% |
| !!! | TAATTTTATATAGCCTAGTT+TGG | - | chr2_2:25369447-25369466 | Msa0245590:intron | 20.0% |
| !!! | TATTTCATTTTGAAACAACA+GGG | - | chr2_2:25369516-25369535 | Msa0245590:intron | 20.0% |
| !! | AAAATGAAAATCAATCCAAT+GGG | + | chr2_2:25369842-25369861 | None:intergenic | 20.0% |
| !! | TAAAATGAAAATCAATCCAA+TGG | + | chr2_2:25369843-25369862 | None:intergenic | 20.0% |
| !!! | TTTATTTTATATATGCTTGC+AGG | - | chr2_2:25370217-25370236 | Msa0245590:intron | 20.0% |
| ! | AAGAAATTGTGTTCATTGAT+CGG | + | chr2_2:25364589-25364608 | None:intergenic | 25.0% |
| !!! | TCTTGTTTTATTGATCATGT+TGG | - | chr2_2:25364835-25364854 | Msa0245590:intron | 25.0% |
| !!! | TGTTTTTTGTTTTGAATTGC+AGG | - | chr2_2:25364858-25364877 | Msa0245590:intron | 25.0% |
| ! | GAATTTGAACTATGAAGAAA+AGG | - | chr2_2:25364970-25364989 | Msa0245590:intron | 25.0% |
| ! | ATTTGAACTATGAAGAAAAG+GGG | - | chr2_2:25364972-25364991 | Msa0245590:intron | 25.0% |
| ! | AGTTGTTTATTGTTTAGCTA+TGG | - | chr2_2:25365024-25365043 | Msa0245590:intron | 25.0% |
| ! | TGATTGCATATACATCAATT+TGG | + | chr2_2:25365095-25365114 | None:intergenic | 25.0% |
| ! | TGTGAAGAGAATATTTGAAA+TGG | - | chr2_2:25365657-25365676 | Msa0245590:intron | 25.0% |
| !! | GTGAAGAGAATATTTGAAAT+GGG | - | chr2_2:25365658-25365677 | Msa0245590:intron | 25.0% |
| !! | CAAGTTAGAATCAATTTTAG+AGG | - | chr2_2:25365782-25365801 | Msa0245590:intron | 25.0% |
| !!! | AAATTTTTGGAAAACCAGTA+TGG | - | chr2_2:25365905-25365924 | Msa0245590:intron | 25.0% |
| !!! | TTTTGACTGTAAAAAAGAAG+TGG | - | chr2_2:25366454-25366473 | Msa0245590:intron | 25.0% |
| !!! | AAATTTTATGTGGCATTGAA+TGG | - | chr2_2:25366485-25366504 | Msa0245590:intron | 25.0% |
| ! | ATGGTATGTTTCAAATATCT+GGG | + | chr2_2:25366812-25366831 | None:intergenic | 25.0% |
| !! | AATATGCCAATATTTTTCTG+AGG | + | chr2_2:25366858-25366877 | None:intergenic | 25.0% |
| ! | GGAGAAAGATTATTAATTAC+AGG | + | chr2_2:25366964-25366983 | None:intergenic | 25.0% |
| !!! | AAGTTTATTTTCTTTGGTTC+AGG | + | chr2_2:25366993-25367012 | None:intergenic | 25.0% |
| ! | TGAATAAATTAGAGAAACTC+GGG | + | chr2_2:25367030-25367049 | None:intergenic | 25.0% |
| !! | TTTTATAGTTGAAAACGAAG+CGG | - | chr2_2:25367109-25367128 | Msa0245590:intron | 25.0% |
| ! | CAAAATAATGTATGCTTCAT+TGG | - | chr2_2:25367174-25367193 | Msa0245590:intron | 25.0% |
| ! | GATGATTCATTTCACATATA+AGG | + | chr2_2:25367242-25367261 | None:intergenic | 25.0% |
| !! | TTTTTAATCAGGAAAATGTC+AGG | - | chr2_2:25367463-25367482 | Msa0245590:intron | 25.0% |
| ! | ACTCCAAACCATTTAATATT+TGG | + | chr2_2:25367687-25367706 | None:intergenic | 25.0% |
| !! | AAATATTAAATGGTTTGGAG+TGG | - | chr2_2:25367686-25367705 | Msa0245590:intron | 25.0% |
| ! | AGATTACAATGTTCTAGTAA+TGG | - | chr2_2:25367713-25367732 | Msa0245590:intron | 25.0% |
| !! | AATTATCTGGTTTAATATCC+CGG | + | chr2_2:25367976-25367995 | None:intergenic | 25.0% |
| !!! | TAGGTTTACTGTATTGATTT+TGG | - | chr2_2:25368112-25368131 | Msa0245590:intron | 25.0% |
| ! | TTAGCAATGTATATACATGA+GGG | - | chr2_2:25368366-25368385 | Msa0245590:intron | 25.0% |
| !! | ACCTTACAAATAGATTTTGT+GGG | - | chr2_2:25368657-25368676 | Msa0245590:intron | 25.0% |
| !!! | TATTGAATTTTGGAGGATAA+AGG | - | chr2_2:25368876-25368895 | Msa0245590:intron | 25.0% |
| !!! | ATTGAATTTTGGAGGATAAA+GGG | - | chr2_2:25368877-25368896 | Msa0245590:intron | 25.0% |
| ! | TGATATAGTTCTTATATCAC+CGG | + | chr2_2:25369320-25369339 | None:intergenic | 25.0% |
| !!! | TCATCAAAACTTTGTTTTTC+AGG | - | chr2_2:25369378-25369397 | Msa0245590:intron | 25.0% |
| !!! | GTATTTCATTTTGAAACAAC+AGG | - | chr2_2:25369515-25369534 | Msa0245590:intron | 25.0% |
| ! | AGGGAAAATAAAAATTTGAC+TGG | - | chr2_2:25369535-25369554 | Msa0245590:intron | 25.0% |
| AGAAAAAGGAGCTGAAAAAA+TGG | + | chr2_2:25364525-25364544 | None:intergenic | 30.0% | |
| GATCAATGAACACAATTTCT+TGG | - | chr2_2:25364588-25364607 | Msa0245590:intron | 30.0% | |
| ! | GTAAGGGTTTGAATTTTGAA+TGG | - | chr2_2:25364678-25364697 | Msa0245590:CDS | 30.0% |
| ! | CTCTCTCTTATGATTTTGTT+TGG | - | chr2_2:25364787-25364806 | Msa0245590:intron | 30.0% |
| AAATCAACGTTGTTAAACAG+CGG | - | chr2_2:25365467-25365486 | Msa0245590:CDS | 30.0% | |
| GTTATAACAATGTTGTCTAG+CGG | - | chr2_2:25365580-25365599 | Msa0245590:intron | 30.0% | |
| TTGTGGATCACAAATAATAG+TGG | + | chr2_2:25365618-25365637 | None:intergenic | 30.0% | |
| ! | AGAATATTTGAAATGGGTAG+AGG | - | chr2_2:25365664-25365683 | Msa0245590:intron | 30.0% |
| ! | GAATATTTGAAATGGGTAGA+GGG | - | chr2_2:25365665-25365684 | Msa0245590:intron | 30.0% |
| TTGAGTCTAAAAATCACATG+TGG | - | chr2_2:25365734-25365753 | Msa0245590:intron | 30.0% | |
| ! | TGTTGCACTTTCTTATCTTT+TGG | - | chr2_2:25366195-25366214 | Msa0245590:intron | 30.0% |
| ! | GTTGCACTTTCTTATCTTTT+GGG | - | chr2_2:25366196-25366215 | Msa0245590:intron | 30.0% |
| ! | TTGCACTTTCTTATCTTTTG+GGG | - | chr2_2:25366197-25366216 | Msa0245590:intron | 30.0% |
| TCTGTTTATGCAGTATTAGT+AGG | - | chr2_2:25366317-25366336 | Msa0245590:intron | 30.0% | |
| ATGCCACATAAAATTTACAC+TGG | + | chr2_2:25366481-25366500 | None:intergenic | 30.0% | |
| TTTCAAAGAGGTCATTCATA+TGG | - | chr2_2:25366694-25366713 | Msa0245590:intron | 30.0% | |
| CATGGTATGTTTCAAATATC+TGG | + | chr2_2:25366813-25366832 | None:intergenic | 30.0% | |
| AAGTCTCCTCAGAAAAATAT+TGG | - | chr2_2:25366849-25366868 | Msa0245590:CDS | 30.0% | |
| TATGTTAATCTCAGAGTCTA+TGG | - | chr2_2:25366899-25366918 | Msa0245590:intron | 30.0% | |
| !! | TATTTTCTTTGGTTCAGGAA+GGG | + | chr2_2:25366988-25367007 | None:intergenic | 30.0% |
| !! | TTATTTTCTTTGGTTCAGGA+AGG | + | chr2_2:25366989-25367008 | None:intergenic | 30.0% |
| ATGTCTACTTTCTACACATA+TGG | + | chr2_2:25367076-25367095 | None:intergenic | 30.0% | |
| ! | GGTTCTGTTACTTCTATTAA+TGG | + | chr2_2:25367145-25367164 | None:intergenic | 30.0% |
| TACAGAGTAGAGAATATATC+AGG | + | chr2_2:25367321-25367340 | None:intergenic | 30.0% | |
| ! | TTGAACTTTGCTGGTAATTT+TGG | - | chr2_2:25367342-25367361 | Msa0245590:intron | 30.0% |
| ! | TGAACTTTGCTGGTAATTTT+GGG | - | chr2_2:25367343-25367362 | Msa0245590:intron | 30.0% |
| !! | ATACCCTGCTTTTGAATAAT+TGG | - | chr2_2:25367604-25367623 | Msa0245590:intron | 30.0% |
| AGACCAATTATTCAAAAGCA+GGG | + | chr2_2:25367610-25367629 | None:intergenic | 30.0% | |
| AAGACCAATTATTCAAAAGC+AGG | + | chr2_2:25367611-25367630 | None:intergenic | 30.0% | |
| !! | CTCTAACTCAAGTTTTATCT+TGG | - | chr2_2:25367650-25367669 | Msa0245590:intron | 30.0% |
| CTGGGATTCCAAATATTAAA+TGG | - | chr2_2:25367676-25367695 | Msa0245590:intron | 30.0% | |
| TTAAACATCTCTTCAAGACT+AGG | + | chr2_2:25367750-25367769 | None:intergenic | 30.0% | |
| CTTACTATTAGTTCAATGGT+AGG | + | chr2_2:25367872-25367891 | None:intergenic | 30.0% | |
| TAAACCAGATAATTTCCTCA+TGG | - | chr2_2:25367982-25368001 | Msa0245590:intron | 30.0% | |
| AAACCAGATAATTTCCTCAT+GGG | - | chr2_2:25367983-25368002 | Msa0245590:intron | 30.0% | |
| ACTAAATCATCATACCTGTA+AGG | + | chr2_2:25368181-25368200 | None:intergenic | 30.0% | |
| TACAGGTATGATGATTTAGT+TGG | - | chr2_2:25368181-25368200 | Msa0245590:intron | 30.0% | |
| CTTAGCAATGTATATACATG+AGG | - | chr2_2:25368365-25368384 | Msa0245590:intron | 30.0% | |
| TCATTAGACGATACTTTAGA+AGG | - | chr2_2:25368568-25368587 | Msa0245590:intron | 30.0% | |
| ! | CATTAGACGATACTTTAGAA+GGG | - | chr2_2:25368569-25368588 | Msa0245590:intron | 30.0% |
| ! | CACCTTACAAATAGATTTTG+TGG | - | chr2_2:25368656-25368675 | Msa0245590:intron | 30.0% |
| ! | CCTTACAAATAGATTTTGTG+GGG | - | chr2_2:25368658-25368677 | Msa0245590:intron | 30.0% |
| CTTATTCATCACTTTGTATG+AGG | + | chr2_2:25368720-25368739 | None:intergenic | 30.0% | |
| CAAAGTGATGAATAAGTAGT+AGG | - | chr2_2:25368724-25368743 | Msa0245590:intron | 30.0% | |
| CTAAATCTTGAATTCAAGCT+GGG | - | chr2_2:25368751-25368770 | Msa0245590:intron | 30.0% | |
| !!! | TTTGAGGTATTGAATTTTGG+AGG | - | chr2_2:25368869-25368888 | Msa0245590:intron | 30.0% |
| TGTGTCAATAAGATCCAAAA+TGG | + | chr2_2:25369127-25369146 | None:intergenic | 30.0% | |
| TGATATATGAGAGGACATTA+TGG | - | chr2_2:25369252-25369271 | Msa0245590:intron | 30.0% | |
| CCTATAAAACAACAACAATC+AGG | + | chr2_2:25369297-25369316 | None:intergenic | 30.0% | |
| !!! | CCTGATTGTTGTTGTTTTAT+AGG | - | chr2_2:25369294-25369313 | Msa0245590:intron | 30.0% |
| !!! | ATTGTTGTTGTTTTATAGGC+CGG | - | chr2_2:25369298-25369317 | Msa0245590:intron | 30.0% |
| CTTTGCTCTATAGTAATGAT+CGG | + | chr2_2:25369694-25369713 | None:intergenic | 30.0% | |
| ! | ATTTTATATGCAGTCTTCCT+TGG | - | chr2_2:25369857-25369876 | Msa0245590:intron | 30.0% |
| AGTGCATATTACGTATTCAA+AGG | + | chr2_2:25369981-25370000 | None:intergenic | 30.0% | |
| TATCATCAAACCTTAATGAC+CGG | + | chr2_2:25370093-25370112 | None:intergenic | 30.0% | |
| CTCATAAAAAAACACCTCTT+TGG | - | chr2_2:25370180-25370199 | Msa0245590:intron | 30.0% | |
| TATCATATTGGCATTTGAAC+AGG | - | chr2_2:25370276-25370295 | Msa0245590:CDS | 30.0% | |
| ATCATATTGGCATTTGAACA+GGG | - | chr2_2:25370277-25370296 | Msa0245590:CDS | 30.0% | |
| AATCAAAGATGTAATCAGAC+TGG | + | chr2_2:25370305-25370324 | None:intergenic | 30.0% | |
| AGTCTGATTACATCTTTGAT+TGG | - | chr2_2:25370304-25370323 | Msa0245590:CDS | 30.0% | |
| ! | AGATCTTTTCCATTAGCAAT+GGG | - | chr2_2:25370415-25370434 | Msa0245590:five_prime_UTR | 30.0% |
| !! | TAAGCGTTGAAATTAGCGTA+AGG | - | chr2_2:25364661-25364680 | Msa0245590:CDS | 35.0% |
| !! | AAGCGTTGAAATTAGCGTAA+GGG | - | chr2_2:25364662-25364681 | Msa0245590:CDS | 35.0% |
| TCATTCGGAGAGATCTATTT+AGG | - | chr2_2:25364751-25364770 | Msa0245590:intron | 35.0% | |
| AAAACAGGGTTTAGGAAAAG+TGG | - | chr2_2:25365054-25365073 | Msa0245590:intron | 35.0% | |
| ATATAAGAAGCCTTCTGACA+CGG | - | chr2_2:25365127-25365146 | Msa0245590:CDS | 35.0% | |
| GAGATTAGAGTAGACTCAAT+AGG | - | chr2_2:25365189-25365208 | Msa0245590:intron | 35.0% | |
| CACCTTTATATAAAGGATCC+CGG | - | chr2_2:25365266-25365285 | Msa0245590:CDS | 35.0% | |
| TTATCGACAGTCATGATTGA+TGG | - | chr2_2:25365342-25365361 | Msa0245590:intron | 35.0% | |
| AGGATTATAGGTTATTGGAC+CGG | - | chr2_2:25365425-25365444 | Msa0245590:intron | 35.0% | |
| !! | TAGAGTTCTGGAGACAAAAT+TGG | + | chr2_2:25365848-25365867 | None:intergenic | 35.0% |
| ! | GTTTTCCAAAAATTTGCCAC+CGG | + | chr2_2:25365900-25365919 | None:intergenic | 35.0% |
| CTATACATCAAACAGCATGT+CGG | - | chr2_2:25365953-25365972 | Msa0245590:intron | 35.0% | |
| TCAAATAATTACCAGTGCCA+AGG | - | chr2_2:25366098-25366117 | Msa0245590:intron | 35.0% | |
| !! | GCTAGTTCTATTCTGAACAA+TGG | + | chr2_2:25366372-25366391 | None:intergenic | 35.0% |
| AGAATAGAACTAGCACTTTG+TGG | - | chr2_2:25366378-25366397 | Msa0245590:intron | 35.0% | |
| ! | GGACCAGTGTAAATTTTATG+TGG | - | chr2_2:25366475-25366494 | Msa0245590:intron | 35.0% |
| !! | CTTGTTTTTCTCAGTCAGTA+TGG | + | chr2_2:25366544-25366563 | None:intergenic | 35.0% |
| TATTACCTCTATGACATGCA+TGG | - | chr2_2:25366607-25366626 | Msa0245590:intron | 35.0% | |
| !! | ACCTCTTTGAAACATGTTAG+AGG | + | chr2_2:25366686-25366705 | None:intergenic | 35.0% |
| ! | TTACACGCACAAGCATTTTA+AGG | + | chr2_2:25366748-25366767 | None:intergenic | 35.0% |
| TTAATCTCAGAGTCTATGGT+TGG | - | chr2_2:25366903-25366922 | Msa0245590:intron | 35.0% | |
| TAATCTCAGAGTCTATGGTT+GGG | - | chr2_2:25366904-25366923 | Msa0245590:intron | 35.0% | |
| TGTAGCTAGTTACTAGATTC+TGG | - | chr2_2:25367377-25367396 | Msa0245590:intron | 35.0% | |
| TAAAAAGAGCAGCAAAGAAC+AGG | + | chr2_2:25367449-25367468 | None:intergenic | 35.0% | |
| ! | CTTTGCTGCTCTTTTTAATC+AGG | - | chr2_2:25367452-25367471 | Msa0245590:intron | 35.0% |
| ! | TATTAAATGGTTTGGAGTGG+AGG | - | chr2_2:25367689-25367708 | Msa0245590:intron | 35.0% |
| ! | ATTAAATGGTTTGGAGTGGA+GGG | - | chr2_2:25367690-25367709 | Msa0245590:intron | 35.0% |
| TGTGAATGCCTTAGTAAACT+AGG | - | chr2_2:25368206-25368225 | Msa0245590:intron | 35.0% | |
| AGGAATAGCCTAGTTTACTA+AGG | + | chr2_2:25368217-25368236 | None:intergenic | 35.0% | |
| TCCTAATTGTTAGACCTTGA+TGG | - | chr2_2:25368233-25368252 | Msa0245590:intron | 35.0% | |
| CAATGTATATACATGAGGGA+CGG | - | chr2_2:25368370-25368389 | Msa0245590:intron | 35.0% | |
| ATAGACAAGCAAAGCATGAT+TGG | + | chr2_2:25368480-25368499 | None:intergenic | 35.0% | |
| GTCAAAAACAGACATTGAGT+GGG | + | chr2_2:25368517-25368536 | None:intergenic | 35.0% | |
| AGTCAAAAACAGACATTGAG+TGG | + | chr2_2:25368518-25368537 | None:intergenic | 35.0% | |
| TGTAAGGTGAAGATTGTCAA+AGG | + | chr2_2:25368645-25368664 | None:intergenic | 35.0% | |
| CCCCACAAAATCTATTTGTA+AGG | + | chr2_2:25368661-25368680 | None:intergenic | 35.0% | |
| CCAGCTTGAATTCAAGATTT+AGG | + | chr2_2:25368753-25368772 | None:intergenic | 35.0% | |
| CCTAAATCTTGAATTCAAGC+TGG | - | chr2_2:25368750-25368769 | Msa0245590:intron | 35.0% | |
| ACATTCCACATAACTCCTAA+AGG | + | chr2_2:25368796-25368815 | None:intergenic | 35.0% | |
| AAAAGACTAATGAGGCTTTG+AGG | - | chr2_2:25368853-25368872 | Msa0245590:intron | 35.0% | |
| !!! | GGCTTTGAGGTATTGAATTT+TGG | - | chr2_2:25368866-25368885 | Msa0245590:intron | 35.0% |
| AACCATGTGTAGAATGCTTA+CGG | - | chr2_2:25369345-25369364 | Msa0245590:intron | 35.0% | |
| GGACAAATTGTGATTCTTCT+CGG | - | chr2_2:25369399-25369418 | Msa0245590:intron | 35.0% | |
| TTGCTTAATGTGCATCAAAG+TGG | - | chr2_2:25369630-25369649 | Msa0245590:intron | 35.0% | |
| ! | AGAGATGATTTAGAGTCTGT+TGG | - | chr2_2:25369718-25369737 | Msa0245590:intron | 35.0% |
| CACTAGAAGAAAACAATGCA+AGG | + | chr2_2:25369808-25369827 | None:intergenic | 35.0% | |
| ! | TTTCTCGTACTTTTCTCTCT+TGG | + | chr2_2:25369902-25369921 | None:intergenic | 35.0% |
| CGAGAAAATCAGTGAAAAGA+AGG | - | chr2_2:25369915-25369934 | Msa0245590:intron | 35.0% | |
| GTGGGTAGGTTTGATATAAT+TGG | - | chr2_2:25369955-25369974 | Msa0245590:intron | 35.0% | |
| TGGAATACATAACAAGGCAT+TGG | + | chr2_2:25370019-25370038 | None:intergenic | 35.0% | |
| ! | AATGCCTTGTTATGTATTCC+AGG | - | chr2_2:25370018-25370037 | Msa0245590:intron | 35.0% |
| AAGTATGATGCAAACTCTGT+TGG | + | chr2_2:25370061-25370080 | None:intergenic | 35.0% | |
| CATCATACTTCCATTATTGC+CGG | - | chr2_2:25370071-25370090 | Msa0245590:intron | 35.0% | |
| ! | GGTCATTAAGGTTTGATGAT+AGG | - | chr2_2:25370092-25370111 | Msa0245590:intron | 35.0% |
| !!! | CTTTTGAGGTATGCATAATC+TGG | + | chr2_2:25370118-25370137 | None:intergenic | 35.0% |
| ! | GGTCTCGAAATATTCTTTTG+AGG | + | chr2_2:25370132-25370151 | None:intergenic | 35.0% |
| TCAAACCTTCACGAATAAAC+AGG | + | chr2_2:25370153-25370172 | None:intergenic | 35.0% | |
| ! | GAGATCTTTTCCATTAGCAA+TGG | - | chr2_2:25370414-25370433 | Msa0245590:five_prime_UTR | 35.0% |
| AGAATTCTACCCATTGCTAA+TGG | + | chr2_2:25370427-25370446 | None:intergenic | 35.0% | |
| ! | AATTCTCATGCCTGTGTTTT+AGG | - | chr2_2:25370441-25370460 | Msa0245590:five_prime_UTR | 35.0% |
| ! | ATTCTCATGCCTGTGTTTTA+GGG | - | chr2_2:25370442-25370461 | Msa0245590:five_prime_UTR | 35.0% |
| GTTGGGAATAAGTTTCGTGT+TGG | - | chr2_2:25364709-25364728 | Msa0245590:CDS | 40.0% | |
| ! | TTTCGTGTTGGTCGTAAGAT+CGG | - | chr2_2:25364721-25364740 | Msa0245590:intron | 40.0% |
| ! | AGCTATGGTTGATGCAAAAC+AGG | - | chr2_2:25365039-25365058 | Msa0245590:intron | 40.0% |
| ! | GCTATGGTTGATGCAAAACA+GGG | - | chr2_2:25365040-25365059 | Msa0245590:intron | 40.0% |
| GTTGATGCAAAACAGGGTTT+AGG | - | chr2_2:25365046-25365065 | Msa0245590:intron | 40.0% | |
| AGTAGACTCAATAGGAGAGT+CGG | - | chr2_2:25365197-25365216 | Msa0245590:intron | 40.0% | |
| GCGAAGCCACCTTTATATAA+AGG | - | chr2_2:25365259-25365278 | Msa0245590:CDS | 40.0% | |
| CGGGATCCTTTATATAAAGG+TGG | + | chr2_2:25365268-25365287 | None:intergenic | 40.0% | |
| AGCCGGGATCCTTTATATAA+AGG | + | chr2_2:25365271-25365290 | None:intergenic | 40.0% | |
| AACCATGCTCCTATGGTATA+AGG | - | chr2_2:25365365-25365384 | Msa0245590:intron | 40.0% | |
| TCATGTGGTCCTTATACCAT+AGG | + | chr2_2:25365377-25365396 | None:intergenic | 40.0% | |
| GCATGACAGAAAACTTCATG+TGG | + | chr2_2:25365392-25365411 | None:intergenic | 40.0% | |
| ! | TTTTCTGTCATGCCTCAAGT+GGG | - | chr2_2:25365399-25365418 | Msa0245590:intron | 40.0% |
| GGATTATAGGTTATTGGACC+GGG | - | chr2_2:25365426-25365445 | Msa0245590:intron | 40.0% | |
| TGATCCACAATTGACAACAC+TGG | - | chr2_2:25365628-25365647 | Msa0245590:intron | 40.0% | |
| GATCCACAATTGACAACACT+GGG | - | chr2_2:25365629-25365648 | Msa0245590:intron | 40.0% | |
| TAACCCAGTGTTGTCAATTG+TGG | + | chr2_2:25365635-25365654 | None:intergenic | 40.0% | |
| TCAATTCTACCCGAGAACAT+CGG | - | chr2_2:25365810-25365829 | Msa0245590:intron | 40.0% | |
| TTGTCATGTTCCGATGTTCT+CGG | + | chr2_2:25365823-25365842 | None:intergenic | 40.0% | |
| TGGCCAATTTGTGAAGGAAA+TGG | - | chr2_2:25365925-25365944 | Msa0245590:intron | 40.0% | |
| CCACCATTTCCTTCACAAAT+TGG | + | chr2_2:25365931-25365950 | None:intergenic | 40.0% | |
| CCAATTTGTGAAGGAAATGG+TGG | - | chr2_2:25365928-25365947 | Msa0245590:intron | 40.0% | |
| ! | CAAACAGCATGTCGGATTTT+TGG | - | chr2_2:25365961-25365980 | Msa0245590:intron | 40.0% |
| ! | TCACACACATGGATCTGTTT+TGG | + | chr2_2:25366054-25366073 | None:intergenic | 40.0% |
| TTGCTTGTGAATCACACACA+TGG | + | chr2_2:25366065-25366084 | None:intergenic | 40.0% | |
| AGCAAAGATACGGTCAAAGA+TGG | + | chr2_2:25366170-25366189 | None:intergenic | 40.0% | |
| CAACAAGCTCAGCAAAGATA+CGG | + | chr2_2:25366180-25366199 | None:intergenic | 40.0% | |
| !! | TATCTTTTGGGGAATGTGAC+AGG | - | chr2_2:25366208-25366227 | Msa0245590:intron | 40.0% |
| !! | ATCTTTTGGGGAATGTGACA+GGG | - | chr2_2:25366209-25366228 | Msa0245590:intron | 40.0% |
| !! | AAACCCTTTTGTTGTGAGTG+AGG | - | chr2_2:25366290-25366309 | Msa0245590:intron | 40.0% |
| AGTCCTCACTCACAACAAAA+GGG | + | chr2_2:25366296-25366315 | None:intergenic | 40.0% | |
| AAGTCCTCACTCACAACAAA+AGG | + | chr2_2:25366297-25366316 | None:intergenic | 40.0% | |
| GCCTCTAACATGTTTCAAAG+AGG | - | chr2_2:25366682-25366701 | Msa0245590:intron | 40.0% | |
| !! | TCTATGGTTGGGTATTGGAT+TGG | - | chr2_2:25366915-25366934 | Msa0245590:intron | 40.0% |
| ACTCTGTACTTGAACTTTGC+TGG | - | chr2_2:25367333-25367352 | Msa0245590:CDS | 40.0% | |
| TTGCAGCATTCTGTACAACT+TGG | + | chr2_2:25367517-25367536 | None:intergenic | 40.0% | |
| AAGTTGTACAGAATGCTGCA+AGG | - | chr2_2:25367516-25367535 | Msa0245590:CDS | 40.0% | |
| !! | TCAAGTTTTATCTTGGCAGC+TGG | - | chr2_2:25367657-25367676 | Msa0245590:intron | 40.0% |
| !! | CAAGTTTTATCTTGGCAGCT+GGG | - | chr2_2:25367658-25367677 | Msa0245590:intron | 40.0% |
| !! | GTTCTAGTAATGGATCTGCT+TGG | - | chr2_2:25367723-25367742 | Msa0245590:intron | 40.0% |
| GGCATAGGCAAAAAAACAGA+AGG | + | chr2_2:25367910-25367929 | None:intergenic | 40.0% | |
| CAAACTCAACACGTTTGATC+TGG | + | chr2_2:25367931-25367950 | None:intergenic | 40.0% | |
| ATTCTAAATCGCTTCTCCAC+CGG | - | chr2_2:25367954-25367973 | Msa0245590:intron | 40.0% | |
| ! | TATCTGGTTTAATATCCCGG+TGG | + | chr2_2:25367973-25367992 | None:intergenic | 40.0% |
| AAGCCCATGAGGAAATTATC+TGG | + | chr2_2:25367989-25368008 | None:intergenic | 40.0% | |
| AGATAATTTCCTCATGGGCT+TGG | - | chr2_2:25367988-25368007 | Msa0245590:intron | 40.0% | |
| GATAATTTCCTCATGGGCTT+GGG | - | chr2_2:25367989-25368008 | Msa0245590:intron | 40.0% | |
| ! | CCTGTAAGGAATGTGTTGAT+GGG | + | chr2_2:25368167-25368186 | None:intergenic | 40.0% |
| ACCTGTAAGGAATGTGTTGA+TGG | + | chr2_2:25368168-25368187 | None:intergenic | 40.0% | |
| GCCATCAAGGTCTAACAATT+AGG | + | chr2_2:25368237-25368256 | None:intergenic | 40.0% | |
| TCAATTCCACTATGCCATCA+AGG | + | chr2_2:25368250-25368269 | None:intergenic | 40.0% | |
| ! | GACGATACTTTAGAAGGGTT+TGG | - | chr2_2:25368574-25368593 | Msa0245590:intron | 40.0% |
| ! | GATACTTTAGAAGGGTTTGG+AGG | - | chr2_2:25368577-25368596 | Msa0245590:intron | 40.0% |
| TGCAATGGCTAGAGATTTGA+AGG | - | chr2_2:25368608-25368627 | Msa0245590:intron | 40.0% | |
| AATCTTGAATTCAAGCTGGG+CGG | - | chr2_2:25368754-25368773 | Msa0245590:intron | 40.0% | |
| TTTAAGTGGAGCGATCCTTT+AGG | - | chr2_2:25368778-25368797 | Msa0245590:intron | 40.0% | |
| ! | TACCACGCTATTGATAACTG+TGG | + | chr2_2:25369012-25369031 | None:intergenic | 40.0% |
| TTTGAAAAACTAGTCACCGG+AGG | + | chr2_2:25369051-25369070 | None:intergenic | 40.0% | |
| CCGTTTGAAAAACTAGTCAC+CGG | + | chr2_2:25369054-25369073 | None:intergenic | 40.0% | |
| !!! | CCGGTGACTAGTTTTTCAAA+CGG | - | chr2_2:25369051-25369070 | Msa0245590:intron | 40.0% |
| !!! | CGGTGACTAGTTTTTCAAAC+GGG | - | chr2_2:25369052-25369071 | Msa0245590:intron | 40.0% |
| !! | GACATTATGGCGTTGATTGT+GGG | - | chr2_2:25369265-25369284 | Msa0245590:intron | 40.0% |
| AAAACAACAGCAGCCAAACT+AGG | + | chr2_2:25369463-25369482 | None:intergenic | 40.0% | |
| GTATATACCAATGCCAAGGT+GGG | + | chr2_2:25369587-25369606 | None:intergenic | 40.0% | |
| GATCGTATATACCAATGCCA+AGG | + | chr2_2:25369591-25369610 | None:intergenic | 40.0% | |
| ATGTCTTGATGTACTTCCTC+AGG | - | chr2_2:25369743-25369762 | Msa0245590:intron | 40.0% | |
| TGTCTTGATGTACTTCCTCA+GGG | - | chr2_2:25369744-25369763 | Msa0245590:intron | 40.0% | |
| ! | AGTGCTTTGTTGAAACCCAT+TGG | - | chr2_2:25369824-25369843 | Msa0245590:intron | 40.0% |
| GAAGGTTTCTACTTCGATTG+AGG | - | chr2_2:25369933-25369952 | Msa0245590:intron | 40.0% | |
| GTTTCTACTTCGATTGAGGT+GGG | - | chr2_2:25369937-25369956 | Msa0245590:intron | 40.0% | |
| AAGGCCTGGAATACATAACA+AGG | + | chr2_2:25370025-25370044 | None:intergenic | 40.0% | |
| TCCATTATTGCCGGTCATTA+AGG | - | chr2_2:25370080-25370099 | Msa0245590:intron | 40.0% | |
| ACCTTAATGACCGGCAATAA+TGG | + | chr2_2:25370084-25370103 | None:intergenic | 40.0% | |
| !! | TTCTCATGCCTGTGTTTTAG+GGG | - | chr2_2:25370443-25370462 | Msa0245590:five_prime_UTR | 40.0% |
| CTTAATGCTGGAACTAGTTC+TGG | - | chr2_2:25370466-25370485 | Msa0245590:five_prime_UTR | 40.0% | |
| CTATTAGCATTAGCCATAGC+AGG | + | chr2_2:25370499-25370518 | None:intergenic | 40.0% | |
| ! | TTTTGAATGGAACGTCGCGT+TGG | - | chr2_2:25364691-25364710 | Msa0245590:CDS | 45.0% |
| TTTGAATGGAACGTCGCGTT+GGG | - | chr2_2:25364692-25364711 | Msa0245590:CDS | 45.0% | |
| ! | AAGATCGGTAGTGGCTCATT+CGG | - | chr2_2:25364736-25364755 | Msa0245590:intron | 45.0% |
| TTCATGGAGTCAGTTACAGC+CGG | + | chr2_2:25365288-25365307 | None:intergenic | 45.0% | |
| TTGATGGAACCATGCTCCTA+TGG | - | chr2_2:25365358-25365377 | Msa0245590:intron | 45.0% | |
| GTCCTTATACCATAGGAGCA+TGG | + | chr2_2:25365370-25365389 | None:intergenic | 45.0% | |
| ! | GTTTTCTGTCATGCCTCAAG+TGG | - | chr2_2:25365398-25365417 | Msa0245590:intron | 45.0% |
| TTTCTGTCATGCCTCAAGTG+GGG | - | chr2_2:25365400-25365419 | Msa0245590:intron | 45.0% | |
| GGGCGAGGATTATAGGTTAT+TGG | - | chr2_2:25365420-25365439 | Msa0245590:intron | 45.0% | |
| GCTATAGCGCTATTGCATAG+CGG | - | chr2_2:25365491-25365510 | Msa0245590:intron | 45.0% | |
| TGTCATGTTCCGATGTTCTC+GGG | + | chr2_2:25365822-25365841 | None:intergenic | 45.0% | |
| ATCCGCCATTTGACAACACA+GGG | + | chr2_2:25365876-25365895 | None:intergenic | 45.0% | |
| TATCCGCCATTTGACAACAC+AGG | + | chr2_2:25365877-25365896 | None:intergenic | 45.0% | |
| !! | TGTTGTCAAATGGCGGATAC+CGG | - | chr2_2:25365878-25365897 | Msa0245590:intron | 45.0% |
| ! | GGATACCGGTGGCAAATTTT+TGG | - | chr2_2:25365892-25365911 | Msa0245590:intron | 45.0% |
| CCTTCACAAATTGGCCATAC+TGG | + | chr2_2:25365922-25365941 | None:intergenic | 45.0% | |
| CCAGTATGGCCAATTTGTGA+AGG | - | chr2_2:25365919-25365938 | Msa0245590:intron | 45.0% | |
| TCAATGCTACCAATGGCTGA+TGG | + | chr2_2:25365994-25366013 | None:intergenic | 45.0% | |
| ! | ACGCCTTCAATCAGAAGTGT+CGG | + | chr2_2:25366022-25366041 | None:intergenic | 45.0% |
| ! | CTTCTGATTGAAGGCGTGTT+TGG | - | chr2_2:25366025-25366044 | Msa0245590:intron | 45.0% |
| !! | AAACTATGAAGCGCTGACAC+AGG | + | chr2_2:25366138-25366157 | None:intergenic | 45.0% |
| TTCTCAGTCAGTATGGTGTC+AGG | + | chr2_2:25366537-25366556 | None:intergenic | 45.0% | |
| CTACAGTCTGCATGTCATAG+AGG | + | chr2_2:25366615-25366634 | None:intergenic | 45.0% | |
| TAGAGCCATGCATGTCATAG+AGG | + | chr2_2:25366661-25366680 | None:intergenic | 45.0% | |
| CAGAGTCTATGGTTGGGTAT+TGG | - | chr2_2:25366910-25366929 | Msa0245590:intron | 45.0% | |
| ! | TTTCTTTGGTTCAGGAAGGG+AGG | + | chr2_2:25366985-25367004 | None:intergenic | 45.0% |
| TTGGACTCATACAGCAACTG+AGG | + | chr2_2:25367498-25367517 | None:intergenic | 45.0% | |
| GCAGGGTATGTTGCAAAAAG+TGG | + | chr2_2:25367593-25367612 | None:intergenic | 45.0% | |
| ! | TCTCATGCTTGCTGAGCAAA+TGG | - | chr2_2:25367803-25367822 | Msa0245590:intron | 45.0% |
| ! | ATGCTTGCTGAGCAAATGGT+AGG | - | chr2_2:25367807-25367826 | Msa0245590:intron | 45.0% |
| CAACACGTTTGATCTGGCAT+AGG | + | chr2_2:25367925-25367944 | None:intergenic | 45.0% | |
| TTCTAAATCGCTTCTCCACC+GGG | - | chr2_2:25367955-25367974 | Msa0245590:intron | 45.0% | |
| ACGTAAACAACTTAGCCACC+TGG | + | chr2_2:25368027-25368046 | None:intergenic | 45.0% | |
| AGGTGGCTAAGTTGTTTACG+TGG | - | chr2_2:25368026-25368045 | Msa0245590:intron | 45.0% | |
| CCCATCAACACATTCCTTAC+AGG | - | chr2_2:25368164-25368183 | Msa0245590:intron | 45.0% | |
| ! | GTTAGACCTTGATGGCATAG+TGG | - | chr2_2:25368241-25368260 | Msa0245590:intron | 45.0% |
| ! | GCGATCCTTTAGGAGTTATG+TGG | - | chr2_2:25368788-25368807 | Msa0245590:intron | 45.0% |
| TGCCACAGTTATCAATAGCG+TGG | - | chr2_2:25369007-25369026 | Msa0245590:intron | 45.0% | |
| AGAGGTAGTCAAATCGCTAG+AGG | - | chr2_2:25369166-25369185 | Msa0245590:intron | 45.0% | |
| !! | GGACATTATGGCGTTGATTG+TGG | - | chr2_2:25369264-25369283 | Msa0245590:intron | 45.0% |
| !! | ATGGCGTTGATTGTGGGATA+AGG | - | chr2_2:25369271-25369290 | Msa0245590:intron | 45.0% |
| TGCCGTAAGCATTCTACACA+TGG | + | chr2_2:25369350-25369369 | None:intergenic | 45.0% | |
| ATGAATACCCACCTTGGCAT+TGG | - | chr2_2:25369577-25369596 | Msa0245590:intron | 45.0% | |
| CGTATATACCAATGCCAAGG+TGG | + | chr2_2:25369588-25369607 | None:intergenic | 45.0% | |
| GTCTTGATGTACTTCCTCAG+GGG | - | chr2_2:25369745-25369764 | Msa0245590:intron | 45.0% | |
| GTAATAATCACCTTCCCCTG+AGG | + | chr2_2:25369762-25369781 | None:intergenic | 45.0% | |
| GCAAGGTTGACAACAATGCA+AGG | + | chr2_2:25369791-25369810 | None:intergenic | 45.0% | |
| ATATGCAGTCTTCCTTGGCA+AGG | - | chr2_2:25369862-25369881 | Msa0245590:intron | 45.0% | |
| TATGCAGTCTTCCTTGGCAA+GGG | - | chr2_2:25369863-25369882 | Msa0245590:intron | 45.0% | |
| GGTTTCTACTTCGATTGAGG+TGG | - | chr2_2:25369936-25369955 | Msa0245590:intron | 45.0% | |
| TGTTGGATAACCTCGACACA+AGG | + | chr2_2:25370044-25370063 | None:intergenic | 45.0% | |
| CGAGACCTGTTTATTCGTGA+AGG | - | chr2_2:25370145-25370164 | Msa0245590:intron | 45.0% | |
| CTCGAAGATTGACACCAAAG+AGG | + | chr2_2:25370197-25370216 | None:intergenic | 45.0% | |
| GCATTAAGCCCCTAAAACAC+AGG | + | chr2_2:25370454-25370473 | None:intergenic | 45.0% | |
| !!! | GTGTTTTAGGGGCTTAATGC+TGG | - | chr2_2:25370454-25370473 | Msa0245590:five_prime_UTR | 45.0% |
| TAGCATTAGCCATAGCAGGA+GGG | + | chr2_2:25370495-25370514 | None:intergenic | 45.0% | |
| TTAGCATTAGCCATAGCAGG+AGG | + | chr2_2:25370496-25370515 | None:intergenic | 45.0% | |
| GTTGGTCGTAAGATCGGTAG+TGG | - | chr2_2:25364727-25364746 | Msa0245590:intron | 50.0% | |
| TAAGAAGCCTTCTGACACGG+CGG | - | chr2_2:25365130-25365149 | Msa0245590:CDS | 50.0% | |
| AATAGTTCCGCCGTGTCAGA+AGG | + | chr2_2:25365140-25365159 | None:intergenic | 50.0% | |
| GGCGGAACTATTCTCATCCA+CGG | - | chr2_2:25365148-25365167 | Msa0245590:intron | 50.0% | |
| GGAACTATTCTCATCCACGG+TGG | - | chr2_2:25365151-25365170 | Msa0245590:intron | 50.0% | |
| AGACTCAATAGGAGAGTCGG+TGG | - | chr2_2:25365200-25365219 | Msa0245590:intron | 50.0% | |
| TAGGAGAGTCGGTGGAAAAG+TGG | - | chr2_2:25365208-25365227 | Msa0245590:intron | 50.0% | |
| TCATGGAGTCAGTTACAGCC+GGG | + | chr2_2:25365287-25365306 | None:intergenic | 50.0% | |
| TAACGAACTCCTGCCTTCCA+CGG | + | chr2_2:25365316-25365335 | None:intergenic | 50.0% | |
| TATAATCCTCGCCCCACTTG+AGG | + | chr2_2:25365414-25365433 | None:intergenic | 50.0% | |
| TCAAGTGGGGCGAGGATTAT+AGG | - | chr2_2:25365413-25365432 | Msa0245590:intron | 50.0% | |
| TAGCGCCCTGTGTTGTCAAA+TGG | - | chr2_2:25365868-25365887 | Msa0245590:intron | 50.0% | |
| GGCGCTATCAATGCTACCAA+TGG | + | chr2_2:25366001-25366020 | None:intergenic | 50.0% | |
| ! | ATGCTGCAAGGAGAGCGTAA+TGG | - | chr2_2:25367528-25367547 | Msa0245590:CDS | 50.0% |
| ! | CTTTAGAAGGGTTTGGAGGC+TGG | - | chr2_2:25368581-25368600 | Msa0245590:intron | 50.0% |
| ! | TCAAGCTGGGCGGATTTAAG+TGG | - | chr2_2:25368764-25368783 | Msa0245590:intron | 50.0% |
| GCTAGCATGAATACCCACCT+TGG | - | chr2_2:25369571-25369590 | Msa0245590:intron | 50.0% | |
| TGATGTACTTCCTCAGGGGA+AGG | - | chr2_2:25369749-25369768 | Msa0245590:intron | 50.0% | |
| CTACTTCGATTGAGGTGGGT+AGG | - | chr2_2:25369941-25369960 | Msa0245590:intron | 50.0% | |
| !! | TTCTGGAATCCCTCCTGCTA+TGG | - | chr2_2:25370483-25370502 | Msa0245590:five_prime_UTR | 50.0% |
| TGACTCCATGAAACCCACCG+TGG | - | chr2_2:25365296-25365315 | Msa0245590:CDS | 55.0% | |
| TCCATGAAACCCACCGTGGA+AGG | - | chr2_2:25365300-25365319 | Msa0245590:CDS | 55.0% | |
| AACCACTGTTCCAGACAGCC+CGG | + | chr2_2:25365447-25365466 | None:intergenic | 55.0% | |
| ! | CACAGGGCGCTATAGAGTTC+TGG | + | chr2_2:25365860-25365879 | None:intergenic | 55.0% |
| CGCCCTGTGTTGTCAAATGG+CGG | - | chr2_2:25365871-25365890 | Msa0245590:intron | 55.0% | |
| !! | TGTCAAATGGCGGATACCGG+TGG | - | chr2_2:25365881-25365900 | Msa0245590:intron | 55.0% |
| GGCTTTCTGCCATCAGCCAT+TGG | - | chr2_2:25365982-25366001 | Msa0245590:intron | 55.0% | |
| ! | GCGCCGACACTTCTGATTGA+AGG | - | chr2_2:25366016-25366035 | Msa0245590:intron | 55.0% |
| !! | CAGTGCCAAGGTGTCGTGTA+CGG | - | chr2_2:25366110-25366129 | Msa0245590:intron | 55.0% |
| TCCTCATGGGCTTGGGAAAG+CGG | - | chr2_2:25367996-25368015 | Msa0245590:intron | 55.0% | |
| CTTGGGAAAGCGGGAAAACC+AGG | - | chr2_2:25368006-25368025 | Msa0245590:intron | 55.0% | |
| TTGGAGGCTGGCAGTTGCAA+TGG | - | chr2_2:25368593-25368612 | Msa0245590:intron | 55.0% | |
| TAGCAGCGTATAGCTGCCTC+CGG | - | chr2_2:25369032-25369051 | Msa0245590:intron | 55.0% | |
| ! | GTATTCCAGGCCTTGTGTCG+AGG | - | chr2_2:25370031-25370050 | Msa0245590:intron | 55.0% |
| GATAACCTCGACACAAGGCC+TGG | + | chr2_2:25370039-25370058 | None:intergenic | 55.0% | |
| CTTACGATAGCACGTGCTGG+AGG | + | chr2_2:25370366-25370385 | None:intergenic | 55.0% | |
| CCACTTACGATAGCACGTGC+TGG | + | chr2_2:25370369-25370388 | None:intergenic | 55.0% | |
| CCAGCACGTGCTATCGTAAG+TGG | - | chr2_2:25370366-25370385 | Msa0245590:five_prime_UTR | 55.0% | |
| ! | CCAGAGAACTTGCTCCACCG+TGG | + | chr2_2:25365168-25365187 | None:intergenic | 60.0% |
| CCACGGTGGAGCAAGTTCTC+TGG | - | chr2_2:25365165-25365184 | Msa0245590:intron | 60.0% | |
| ! | GCCTTCCACGGTGGGTTTCA+TGG | + | chr2_2:25365304-25365323 | None:intergenic | 60.0% |
| TGAAACCCACCGTGGAAGGC+AGG | - | chr2_2:25365304-25365323 | Msa0245590:intron | 60.0% | |
| GAACTCCTGCCTTCCACGGT+GGG | + | chr2_2:25365312-25365331 | None:intergenic | 60.0% | |
| GGTTATTGGACCGGGCTGTC+TGG | - | chr2_2:25365434-25365453 | Msa0245590:CDS | 60.0% | |
| CGTACACGACACCTTGGCAC+TGG | + | chr2_2:25366112-25366131 | None:intergenic | 60.0% | |
| ! | AGGCACCGTACACGACACCT+TGG | + | chr2_2:25366118-25366137 | None:intergenic | 60.0% |
| CCTCATGGGCTTGGGAAAGC+GGG | - | chr2_2:25367997-25368016 | Msa0245590:intron | 60.0% | |
| GGGAAAGCGGGAAAACCAGG+TGG | - | chr2_2:25368009-25368028 | Msa0245590:intron | 60.0% | |
| CGTGCTTGAAGCCCTTGCCA+AGG | + | chr2_2:25369877-25369896 | None:intergenic | 60.0% | |
| CGAACTCCTGCCTTCCACGG+TGG | + | chr2_2:25365313-25365332 | None:intergenic | 65.0% | |
| GTCATGCCTCAAGTGGGGCG+AGG | - | chr2_2:25365405-25365424 | Msa0245590:intron | 65.0% | |
| ! | GACCGGGCTGTCTGGAACAG+TGG | - | chr2_2:25365442-25365461 | Msa0245590:CDS | 65.0% |
| CCCGCTTTCCCAAGCCCATG+AGG | + | chr2_2:25368000-25368019 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 25364503 | 25370525 | 25364503 | ID=Msa0245590;Name=Msa0245590 |
| chr2_2 | mRNA | 25364503 | 25370525 | 25364503 | ID=Msa0245590-mRNA-1;Parent=Msa0245590;Name=Msa0245590-mRNA-1;_AED=0.17;_eAED=0.17;_QI=194|1|0.91|1|1|0.91|12|0|329 |
| chr2_2 | exon | 25364503 | 25364565 | 25364503 | ID=Msa0245590-mRNA-1:exon:9593;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25364648 | 25364730 | 25364648 | ID=Msa0245590-mRNA-1:exon:9592;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25364862 | 25364988 | 25364862 | ID=Msa0245590-mRNA-1:exon:9591;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25365074 | 25365158 | 25365074 | ID=Msa0245590-mRNA-1:exon:9590;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25365258 | 25365321 | 25365258 | ID=Msa0245590-mRNA-1:exon:9589;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25365430 | 25365491 | 25365430 | ID=Msa0245590-mRNA-1:exon:9588;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25366843 | 25366913 | 25366843 | ID=Msa0245590-mRNA-1:exon:9587;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25367001 | 25367096 | 25367001 | ID=Msa0245590-mRNA-1:exon:9586;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25367204 | 25367352 | 25367204 | ID=Msa0245590-mRNA-1:exon:9585;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25367485 | 25367554 | 25367485 | ID=Msa0245590-mRNA-1:exon:9584;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25370108 | 25370148 | 25370108 | ID=Msa0245590-mRNA-1:exon:9583;Parent=Msa0245590-mRNA-1 |
| chr2_2 | exon | 25370256 | 25370525 | 25370256 | ID=Msa0245590-mRNA-1:exon:9582;Parent=Msa0245590-mRNA-1 |
| chr2_2 | five_prime_UTR | 25370332 | 25370525 | 25370332 | ID=Msa0245590-mRNA-1:five_prime_utr;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25370256 | 25370331 | 25370256 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25370108 | 25370148 | 25370108 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25367485 | 25367554 | 25367485 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25367204 | 25367352 | 25367204 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25367001 | 25367096 | 25367001 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25366843 | 25366913 | 25366843 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25365430 | 25365491 | 25365430 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25365258 | 25365321 | 25365258 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25365074 | 25365158 | 25365074 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25364862 | 25364988 | 25364862 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25364648 | 25364730 | 25364648 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| chr2_2 | CDS | 25364503 | 25364565 | 25364503 | ID=Msa0245590-mRNA-1:cds;Parent=Msa0245590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
