AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0246730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0246730 MtrunA17_Chr2g0301301 86.184 152 18 2 1 150 388 538 7.66e-78 242
Msa0246730 MtrunA17_Chr4g0064201 36.242 149 84 5 6 150 245 386 3.43e-17 78.6
Msa0246730 MtrunA17_Chr7g0237401 33.108 148 90 4 6 150 222 363 2.13e-16 76.3
Msa0246730 MtrunA17_Chr1g0160921 28.289 152 101 3 1 150 174 319 3.62e-16 75.5
Msa0246730 MtrunA17_Chr2g0333691 33.784 148 86 5 6 150 249 387 3.87e-16 75.1
Msa0246730 MtrunA17_Chr7g0221191 31.126 151 91 4 6 150 521 664 3.94e-16 75.5
Msa0246730 MtrunA17_Chr5g0413511 28.846 156 98 4 1 150 180 328 7.30e-16 74.3
Msa0246730 MtrunA17_Chr6g0485761 34.694 147 91 3 6 150 421 564 1.49e-15 73.9
Msa0246730 MtrunA17_Chr5g0416011 35.570 149 85 5 6 150 271 412 1.67e-15 73.6
Msa0246730 MtrunA17_Chr2g0281971 31.973 147 90 3 6 150 177 315 1.90e-15 73.2
Msa0246730 MtrunA17_Chr4g0069061 33.108 148 89 4 6 150 44 184 5.76e-15 70.1
Msa0246730 MtrunA17_Chr7g0242201 31.250 176 98 5 6 179 172 326 5.78e-15 71.6
Msa0246730 MtrunA17_Chr7g0252301 33.333 153 89 6 6 153 981 1125 5.89e-15 72.4
Msa0246730 MtrunA17_Chr4g0072901 28.947 152 99 3 1 150 165 309 6.85e-15 71.6
Msa0246730 MtrunA17_Chr3g0109411 27.632 152 102 3 1 150 447 592 8.10e-15 71.6
Msa0246730 MtrunA17_Chr8g0362661 34.899 149 86 5 6 150 269 410 8.26e-15 71.6
Msa0246730 MtrunA17_Chr7g0264461 30.201 149 93 5 6 150 230 371 8.78e-15 71.6
Msa0246730 MtrunA17_Chr2g0333181 30.263 152 97 3 1 150 163 307 9.33e-15 71.2
Msa0246730 MtrunA17_Chr7g0216551 34.899 149 86 5 6 150 259 400 1.38e-14 70.9
Msa0246730 MtrunA17_Chr1g0180951 31.544 149 91 5 6 150 225 366 1.52e-14 70.9
Msa0246730 MtrunA17_Chr1g0196391 31.973 147 91 3 6 150 427 566 1.54e-14 70.9
Msa0246730 MtrunA17_Chr2g0293071 27.333 150 100 3 3 150 183 325 1.55e-14 70.5
Msa0246730 MtrunA17_Chr5g0408941 31.757 148 92 3 6 150 223 364 1.73e-14 70.5
Msa0246730 MtrunA17_Chr7g0273311 30.921 152 93 4 1 150 42 183 1.83e-14 68.6
Msa0246730 MtrunA17_Chr5g0412141 31.579 152 93 4 1 150 259 401 2.42e-14 70.1
Msa0246730 MtrunA17_Chr2g0289161 32.544 169 102 7 1 164 545 706 2.55e-14 70.5
Msa0246730 MtrunA17_Chr8g0358821 33.333 147 88 3 6 150 815 953 4.06e-14 69.7
Msa0246730 MtrunA17_Chr3g0136421 32.886 149 90 5 6 150 214 356 4.20e-14 69.3
Msa0246730 MtrunA17_Chr7g0275131 31.757 148 92 4 6 150 202 343 4.69e-14 69.3
Msa0246730 MtrunA17_Chr4g0060011 28.947 152 98 3 1 150 437 580 5.20e-14 69.3
Msa0246730 MtrunA17_Chr4g0066761 29.054 148 96 3 6 150 200 341 6.13e-14 68.9
Msa0246730 MtrunA17_Chr2g0300711 32.886 149 89 6 6 150 211 352 6.24e-14 68.9
Msa0246730 MtrunA17_Chr4g0047561 34.694 147 86 4 6 150 175 313 7.64e-14 68.6
Msa0246730 MtrunA17_Chr2g0288121 31.081 148 93 4 6 150 171 312 8.02e-14 68.6
Msa0246730 MtrunA17_Chr4g0031601 29.730 148 95 3 6 150 229 370 9.36e-14 68.6
Msa0246730 MtrunA17_Chr2g0277731 32.432 148 93 4 6 148 444 589 1.02e-13 68.6
Msa0246730 MtrunA17_Chr8g0388941 34.899 149 86 5 6 150 203 344 1.04e-13 68.2
Msa0246730 MtrunA17_Chr3g0137191 28.758 153 97 4 1 150 188 331 1.44e-13 67.8
Msa0246730 MtrunA17_Chr4g0034931 27.333 150 100 3 3 150 265 407 1.49e-13 67.8
Msa0246730 MtrunA17_Chr2g0293081 27.211 147 98 3 6 150 523 662 1.52e-13 68.2
Msa0246730 MtrunA17_Chr4g0033571 28.947 152 100 2 1 150 643 788 1.77e-13 67.8
Msa0246730 MtrunA17_Chr7g0245571 32.886 149 89 5 6 150 223 364 2.26e-13 67.4
Msa0246730 MtrunA17_Chr5g0411631 30.065 153 97 4 1 150 719 864 2.27e-13 67.8
Msa0246730 MtrunA17_Chr3g0125281 27.632 152 102 2 1 150 530 675 2.40e-13 67.4
Msa0246730 MtrunA17_Chr8g0367241 30.769 182 113 5 1 178 287 459 2.54e-13 67.4
Msa0246730 MtrunA17_Chr3g0123141 28.947 152 99 3 1 150 730 874 2.73e-13 67.4
Msa0246730 MtrunA17_Chr4g0069251 29.932 147 94 3 6 150 307 446 3.18e-13 67.0
Msa0246730 MtrunA17_Chr4g0070411 33.775 151 89 6 6 152 217 360 3.81e-13 66.6
Msa0246730 MtrunA17_Chr4g0072891 31.579 152 92 4 1 150 389 530 7.67e-13 65.9
Msa0246730 MtrunA17_Chr3g0081071 30.921 152 97 3 1 150 52 197 8.28e-13 64.7
Msa0246730 MtrunA17_Chr2g0330471 30.769 143 90 3 10 150 538 673 8.64e-13 65.9
Msa0246730 MtrunA17_Chr5g0435211 32.215 149 90 5 6 150 212 353 9.38e-13 65.5
Msa0246730 MtrunA17_Chr5g0443691 37.273 110 64 4 6 111 229 337 9.88e-13 65.5
Msa0246730 MtrunA17_Chr2g0286821 31.373 153 91 5 1 150 247 388 1.08e-12 65.5
Msa0246730 MtrunA17_Chr1g0194541 26.590 173 109 5 6 175 421 578 1.30e-12 65.5
Msa0246730 MtrunA17_Chr1g0189871 29.221 154 99 6 1 150 925 1072 1.37e-12 65.5
Msa0246730 MtrunA17_Chr8g0342071 27.564 156 104 3 6 158 578 727 1.47e-12 65.1
Msa0246730 MtrunA17_Chr2g0286281 30.201 149 93 5 6 150 218 359 1.49e-12 65.1
Msa0246730 MtrunA17_Chr3g0103791 27.097 155 103 4 1 151 250 398 2.01e-12 64.7
Msa0246730 MtrunA17_Chr1g0196381 35.398 113 67 3 1 111 238 346 2.60e-12 64.3
Msa0246730 MtrunA17_Chr3g0098391 30.872 149 92 5 6 150 28 169 2.72e-12 63.5
Msa0246730 MtrunA17_Chr7g0248904 25.170 147 101 3 6 150 489 628 3.21e-12 64.3
Msa0246730 MtrunA17_Chr3g0093601 35.965 114 62 5 6 114 229 336 3.34e-12 63.9
Msa0246730 MtrunA17_Chr6g0452761 36.364 110 65 4 6 111 268 376 3.36e-12 63.9
Msa0246730 MtrunA17_Chr2g0284101 30.065 153 97 4 1 150 422 567 3.77e-12 63.9
Msa0246730 MtrunA17_Chr2g0280751 32.237 152 94 3 1 150 649 793 4.35e-12 63.9
Msa0246730 MtrunA17_Chr4g0044691 34.641 153 78 8 6 150 451 589 4.55e-12 63.9
Msa0246730 MtrunA17_Chr1g0213991 30.872 149 92 6 6 150 226 367 4.70e-12 63.5
Msa0246730 MtrunA17_Chr1g0150741 33.557 149 89 6 6 150 214 356 5.28e-12 63.2
Msa0246730 MtrunA17_Chr4g0030301 29.518 166 99 7 6 169 108 257 5.40e-12 62.8
Msa0246730 MtrunA17_Chr2g0327471 28.662 157 101 5 6 158 220 369 5.79e-12 63.2
Msa0246730 MtrunA17_Chr1g0213501 30.345 145 93 3 6 148 246 384 6.79e-12 63.2
Msa0246730 MtrunA17_Chr8g0344141 29.730 148 95 3 6 150 211 352 7.08e-12 63.2
Msa0246730 MtrunA17_Chr2g0329401 28.289 152 99 3 1 150 648 791 8.04e-12 63.2
Msa0246730 MtrunA17_Chr2g0278891 27.848 158 101 5 1 150 419 571 8.13e-12 63.2
Msa0246730 MtrunA17_Chr7g0270121 27.742 155 103 4 6 157 510 658 1.30e-11 62.4
Msa0246730 MtrunA17_Chr4g0071221 26.923 156 105 3 6 158 668 817 1.58e-11 62.4
Msa0246730 MtrunA17_Chr6g0467301 31.081 148 94 3 6 150 620 762 1.68e-11 62.0
Msa0246730 MtrunA17_Chr2g0313911 28.571 154 101 4 1 152 195 341 1.80e-11 61.6
Msa0246730 MtrunA17_Chr7g0248881 25.175 143 98 3 10 150 486 621 1.90e-11 62.0
Msa0246730 MtrunA17_Chr6g0484231 28.105 153 101 2 1 151 171 316 2.02e-11 61.6
Msa0246730 MtrunA17_Chr2g0327511 26.923 156 105 4 6 158 237 386 2.22e-11 61.6
Msa0246730 MtrunA17_Chr1g0169841 27.742 155 100 5 1 150 935 1082 2.53e-11 61.6
Msa0246730 MtrunA17_Chr3g0137741 31.293 147 92 3 6 150 619 758 2.67e-11 61.6
Msa0246730 MtrunA17_Chr5g0433941 34.746 118 69 4 1 111 490 606 2.70e-11 61.6
Msa0246730 MtrunA17_Chr8g0360591 31.579 152 95 3 1 150 167 311 2.85e-11 61.2
Msa0246730 MtrunA17_Chr2g0299301 29.221 154 102 3 6 157 1188 1336 2.91e-11 61.6
Msa0246730 MtrunA17_Chr2g0299041 29.932 147 95 4 6 150 241 381 3.02e-11 61.2
Msa0246730 MtrunA17_Chr2g0320111 30.519 154 96 5 1 150 220 366 3.18e-11 61.2
Msa0246730 MtrunA17_Chr8g0341881 32.692 104 67 2 10 111 536 638 3.21e-11 61.2
Msa0246730 MtrunA17_Chr1g0189791 28.378 148 97 4 6 150 200 341 3.31e-11 61.2
Msa0246730 MtrunA17_Chr8g0376131 25.000 152 105 3 1 150 175 319 3.68e-11 60.8
Msa0246730 MtrunA17_Chr3g0081001 29.605 152 99 2 1 150 466 611 4.01e-11 60.8
Msa0246730 MtrunA17_Chr1g0200911 28.859 149 95 5 6 150 433 574 4.49e-11 60.8
Msa0246730 MtrunA17_Chr3g0119041 29.452 146 89 4 10 150 472 608 6.03e-11 60.5
Msa0246730 MtrunA17_Chr2g0312571 32.468 154 91 4 1 150 171 315 6.11e-11 60.5
Msa0246730 MtrunA17_Chr4g0072221 25.658 152 101 3 1 150 188 329 6.58e-11 60.1
Msa0246730 MtrunA17_Chr1g0149381 28.571 147 96 3 6 150 628 767 6.72e-11 60.5
Msa0246730 MtrunA17_Chr1g0159711 26.000 150 103 2 1 148 477 620 6.91e-11 60.5
Msa0246730 MtrunA17_Chr3g0140861 28.662 157 96 6 1 150 783 930 8.09e-11 60.1
Msa0246730 MtrunA17_Chr3g0109461 26.797 153 103 4 1 150 462 608 8.34e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0246730 AT1G52310.2 71.895 153 35 3 1 150 314 461 1.42e-67 214
Msa0246730 AT1G52310.1 71.895 153 35 3 1 150 391 538 7.32e-67 214
Msa0246730 AT3G28690.1 35.811 148 86 3 6 150 161 302 6.55e-18 80.5
Msa0246730 AT3G28690.3 35.811 148 86 3 6 150 210 351 8.37e-18 80.5
Msa0246730 AT3G28690.2 35.811 148 86 3 6 150 261 402 8.82e-18 80.5
Msa0246730 AT2G28940.1 34.899 149 87 5 6 150 122 264 1.28e-17 79.3
Msa0246730 AT3G07070.1 36.242 149 84 6 6 150 208 349 1.41e-17 79.7
Msa0246730 AT3G01300.1 35.811 148 86 3 6 150 271 412 1.49e-17 80.1
Msa0246730 AT5G15080.1 35.135 148 87 3 6 150 277 418 2.15e-17 79.3
Msa0246730 AT2G28940.2 34.899 149 87 5 6 150 241 383 2.59e-17 79.3
Msa0246730 AT1G10620.1 31.788 151 90 4 6 150 496 639 6.94e-17 78.2
Msa0246730 AT1G68690.4 27.976 168 108 4 1 162 497 657 1.43e-16 77.0
Msa0246730 AT3G09830.2 32.051 156 95 5 6 157 220 368 2.06e-16 76.6
Msa0246730 AT3G09830.3 32.051 156 95 5 6 157 220 368 2.06e-16 76.6
Msa0246730 AT3G09830.1 32.051 156 95 5 6 157 220 368 2.06e-16 76.6
Msa0246730 AT5G65530.1 30.263 152 95 3 1 150 266 408 3.69e-16 75.9
Msa0246730 AT2G33170.2 31.373 153 96 5 1 150 949 1095 4.60e-16 75.9
Msa0246730 AT2G33170.1 31.373 153 96 5 1 150 949 1095 4.60e-16 75.9
Msa0246730 AT1G68690.1 29.139 151 94 4 6 150 502 645 6.22e-16 75.5
Msa0246730 AT1G68690.3 29.139 151 94 4 6 150 502 645 6.22e-16 75.5
Msa0246730 AT1G68690.2 29.139 151 94 4 6 150 502 645 6.22e-16 75.5
Msa0246730 AT1G70460.1 31.126 151 91 4 6 150 479 622 9.30e-16 74.7
Msa0246730 AT2G28930.2 35.570 149 85 5 6 150 206 347 1.36e-15 73.9
Msa0246730 AT2G28930.3 35.570 149 85 5 6 150 209 350 1.38e-15 73.9
Msa0246730 AT1G70450.1 29.487 156 97 4 1 150 171 319 1.63e-15 73.9
Msa0246730 AT2G28930.1 35.570 149 85 5 6 150 217 358 1.79e-15 73.9
Msa0246730 AT1G56120.3 32.237 152 93 3 1 150 665 808 2.02e-15 73.9
Msa0246730 AT1G56120.1 32.237 152 93 3 1 150 831 974 2.19e-15 73.9
Msa0246730 AT5G38560.1 30.719 153 91 6 6 150 465 610 2.27e-15 73.6
Msa0246730 AT1G56120.2 32.237 152 93 3 1 150 813 956 2.57e-15 73.6
Msa0246730 AT5G63940.1 30.400 125 85 1 1 123 484 608 3.19e-15 73.2
Msa0246730 AT1G61860.1 29.730 148 95 3 6 150 214 355 1.22e-14 71.2
Msa0246730 AT1G26150.1 30.464 151 92 4 6 150 556 699 1.24e-14 71.6
Msa0246730 AT1G07570.4 34.899 149 86 5 6 150 89 230 1.26e-14 70.5
Msa0246730 AT5G35580.1 32.886 149 89 5 6 150 208 349 1.34e-14 71.2
Msa0246730 AT5G35580.2 32.886 149 89 5 6 150 220 361 1.42e-14 71.2
Msa0246730 AT1G23540.1 30.464 151 92 4 6 150 497 640 1.85e-14 71.2
Msa0246730 AT1G56145.3 33.544 158 88 4 2 150 699 848 1.94e-14 71.2
Msa0246730 AT1G56145.1 33.544 158 88 4 2 150 802 951 2.13e-14 70.9
Msa0246730 AT5G03320.2 32.468 154 83 6 6 150 217 358 2.17e-14 70.9
Msa0246730 AT5G03320.1 32.468 154 83 6 6 150 217 358 2.17e-14 70.9
Msa0246730 AT1G56145.2 33.544 158 88 4 2 150 829 978 2.49e-14 70.9
Msa0246730 AT4G01330.1 29.932 147 94 3 6 150 290 429 2.75e-14 70.5
Msa0246730 AT4G01330.2 29.932 147 94 3 6 150 290 429 2.75e-14 70.5
Msa0246730 AT4G01330.3 28.947 152 99 3 1 150 285 429 2.84e-14 70.5
Msa0246730 AT1G07570.1 34.899 149 86 5 6 150 205 346 3.69e-14 70.1
Msa0246730 AT1G07570.5 34.899 149 86 5 6 150 205 346 3.69e-14 70.1
Msa0246730 AT1G07570.2 34.899 149 86 5 6 150 205 346 3.69e-14 70.1
Msa0246730 AT1G07570.3 34.899 149 86 5 6 150 216 357 4.14e-14 69.7
Msa0246730 AT3G02810.1 32.000 150 91 4 6 150 193 336 4.16e-14 70.1
Msa0246730 AT5G10520.1 28.947 152 97 4 1 150 275 417 4.23e-14 70.1
Msa0246730 AT1G01540.2 27.632 152 101 3 1 150 277 421 5.29e-14 69.7
Msa0246730 AT3G26940.1 30.667 150 95 4 6 150 202 347 6.75e-14 69.3
Msa0246730 AT3G09010.1 28.947 152 98 3 1 150 169 312 8.89e-14 68.9
Msa0246730 AT2G42960.3 31.293 147 92 3 6 150 311 450 9.21e-14 68.9
Msa0246730 AT2G42960.5 31.293 147 92 3 6 150 311 450 9.21e-14 68.9
Msa0246730 AT2G42960.4 31.293 147 92 3 6 150 311 450 9.21e-14 68.9
Msa0246730 AT2G42960.1 31.293 147 92 3 6 150 311 450 9.21e-14 68.9
Msa0246730 AT2G07180.1 32.886 149 89 5 6 150 222 363 9.48e-14 68.9
Msa0246730 AT2G07180.2 32.886 149 89 5 6 150 222 363 9.48e-14 68.9
Msa0246730 AT3G20530.1 32.075 159 97 5 6 160 212 363 1.04e-13 68.6
Msa0246730 AT1G20650.1 37.037 108 63 4 6 109 206 312 1.15e-13 68.6
Msa0246730 AT5G18910.1 29.605 152 95 4 1 150 312 453 1.43e-13 68.6
Msa0246730 AT2G26290.1 32.215 149 90 5 6 150 220 361 1.88e-13 68.2
Msa0246730 AT3G59420.1 31.579 152 94 3 1 150 638 781 1.90e-13 68.2
Msa0246730 AT2G39110.1 30.872 149 92 5 6 150 227 368 1.93e-13 68.2
Msa0246730 AT2G39110.2 30.872 149 92 5 6 150 212 353 2.40e-13 67.8
Msa0246730 AT5G56790.1 30.769 143 90 3 10 150 521 656 2.57e-13 67.8
Msa0246730 AT1G61590.1 36.697 109 66 2 6 111 231 339 3.01e-13 67.4
Msa0246730 AT5G02800.1 36.364 110 65 4 6 111 202 310 3.22e-13 67.4
Msa0246730 AT2G05940.1 31.792 173 94 8 6 174 219 371 3.59e-13 67.4
Msa0246730 AT1G52540.1 27.907 172 108 4 6 175 168 325 3.65e-13 67.0
Msa0246730 AT2G30730.2 30.612 147 94 3 6 150 191 331 4.20e-13 66.6
Msa0246730 AT1G52540.2 27.907 172 108 4 6 175 165 322 4.22e-13 66.6
Msa0246730 AT2G30730.1 30.612 147 94 3 6 150 181 321 4.80e-13 66.6
Msa0246730 AT1G67720.1 29.605 152 98 3 1 150 728 872 4.92e-13 67.0
Msa0246730 AT1G77280.2 26.786 168 105 3 1 166 526 677 6.33e-13 66.6
Msa0246730 AT1G77280.1 26.786 168 105 3 1 166 526 677 6.33e-13 66.6
Msa0246730 AT4G02630.1 27.211 147 98 3 6 150 291 430 6.65e-13 66.6
Msa0246730 AT2G28590.1 30.201 149 93 5 6 150 227 368 7.07e-13 66.2
Msa0246730 AT5G01020.1 32.215 149 90 5 6 150 201 342 8.64e-13 66.2
Msa0246730 AT2G30740.5 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.2 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.10 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.11 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.6 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.15 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.4 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.14 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.7 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.1 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.13 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.8 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.12 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.3 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT2G30740.9 31.293 147 93 3 6 150 205 345 8.68e-13 65.9
Msa0246730 AT1G06700.1 29.932 147 95 2 6 150 202 342 1.08e-12 65.5
Msa0246730 AT1G06700.3 29.932 147 95 2 6 150 202 342 1.08e-12 65.5
Msa0246730 AT1G06700.2 29.932 147 95 2 6 150 202 342 1.08e-12 65.5
Msa0246730 AT1G75820.1 28.902 173 101 5 1 158 814 979 1.09e-12 65.9
Msa0246730 AT4G13190.2 30.405 148 94 4 6 150 53 194 1.28e-12 64.3
Msa0246730 AT4G13190.3 30.405 148 94 4 6 150 53 194 1.28e-12 64.3
Msa0246730 AT4G13190.5 30.405 148 94 4 6 150 111 252 1.70e-12 64.7
Msa0246730 AT4G35600.1 31.081 148 93 3 6 150 220 361 2.22e-12 64.7
Msa0246730 AT4G35600.2 31.081 148 93 3 6 150 221 362 2.24e-12 64.7
Msa0246730 AT2G28970.2 34.459 148 85 5 6 150 571 709 2.60e-12 65.1
Msa0246730 AT5G18500.2 29.252 147 95 3 6 150 294 433 2.72e-12 64.7
Msa0246730 AT5G18500.5 29.252 147 95 3 6 150 294 433 2.72e-12 64.7
Msa0246730 AT5G18500.4 29.252 147 95 3 6 150 294 433 2.72e-12 64.7
Msa0246730 AT5G18500.1 29.252 147 95 3 6 150 294 433 2.72e-12 64.7
Msa0246730 AT5G18500.3 29.252 147 95 3 6 150 294 433 2.72e-12 64.7
Msa0246730 AT5G18500.6 29.252 147 95 3 6 150 294 433 2.72e-12 64.7
Msa0246730 AT2G28970.1 34.459 148 85 5 6 150 606 744 2.82e-12 64.7
Msa0246730 AT2G43230.2 29.932 147 95 2 6 150 279 419 2.88e-12 64.7
Msa0246730 AT1G18390.1 27.500 160 98 5 1 152 459 608 3.05e-12 64.7
Msa0246730 AT1G18390.2 27.500 160 98 5 1 152 465 614 3.59e-12 64.3
Msa0246730 AT5G57670.2 27.632 152 98 3 1 150 389 530 3.59e-12 64.3
Msa0246730 AT5G49760.1 35.099 151 82 6 6 150 757 897 3.80e-12 64.3
Msa0246730 AT5G35960.1 29.762 168 104 6 1 164 254 411 3.98e-12 64.3
Msa0246730 AT2G43230.1 29.932 147 95 2 6 150 245 385 3.98e-12 64.3
Msa0246730 AT1G51790.2 33.987 153 89 6 1 150 749 892 4.21e-12 64.3
Msa0246730 AT1G70530.1 28.947 152 97 5 1 150 445 587 4.29e-12 64.3
Msa0246730 AT1G51790.3 33.987 153 89 6 1 150 697 840 4.38e-12 64.3
Msa0246730 AT1G51790.1 33.987 153 89 6 1 150 697 840 4.38e-12 64.3
Msa0246730 AT1G21590.2 25.658 152 105 2 1 150 491 636 4.47e-12 64.3
Msa0246730 AT3G59350.6 30.345 145 93 2 6 148 262 400 4.56e-12 63.9
Msa0246730 AT5G35960.2 30.519 154 95 5 1 152 254 397 4.58e-12 63.9
Msa0246730 AT1G21590.1 25.658 152 105 2 1 150 531 676 4.60e-12 64.3
Msa0246730 AT1G52290.1 30.921 152 91 6 6 150 269 413 5.08e-12 63.9
Msa0246730 AT3G25560.3 29.032 155 96 5 1 150 432 577 5.50e-12 63.9
Msa0246730 AT3G25560.1 29.032 155 96 5 1 150 432 577 5.80e-12 63.9
Msa0246730 AT3G25560.2 29.032 155 96 5 1 150 433 578 5.97e-12 63.9
Msa0246730 AT3G59350.3 30.345 145 93 2 6 148 247 385 6.20e-12 63.5
Msa0246730 AT3G59350.1 30.345 145 93 2 6 148 247 385 6.20e-12 63.5
Msa0246730 AT3G59350.2 30.345 145 93 2 6 148 205 343 6.33e-12 63.5
Msa0246730 AT1G51880.2 32.468 154 90 6 6 155 710 853 6.48e-12 63.9
Msa0246730 AT1G51880.3 32.468 154 90 6 6 155 718 861 6.67e-12 63.9
Msa0246730 AT3G59110.1 28.289 152 100 3 1 150 313 457 6.84e-12 63.5
Msa0246730 AT1G51880.1 32.468 154 90 6 6 155 692 835 6.90e-12 63.5
Msa0246730 AT1G56720.3 27.891 147 97 3 6 150 307 446 7.87e-12 63.5
Msa0246730 AT1G56720.1 27.891 147 97 3 6 150 307 446 7.87e-12 63.5
Msa0246730 AT1G56720.2 27.891 147 97 3 6 150 307 446 7.87e-12 63.5
Msa0246730 AT1G56720.4 27.891 147 97 3 6 150 307 446 7.87e-12 63.5
Msa0246730 AT1G53730.1 28.289 152 96 5 1 149 541 682 8.08e-12 63.5
Msa0246730 AT1G53430.1 33.333 147 89 3 6 150 797 936 8.23e-12 63.5
Msa0246730 AT1G53430.2 33.333 147 89 3 6 150 756 895 8.35e-12 63.5
Msa0246730 AT1G53440.1 33.333 147 89 3 6 150 795 934 9.23e-12 63.5
Msa0246730 AT4G02010.1 28.931 159 104 4 6 161 510 662 1.04e-11 63.2
Msa0246730 AT4G32000.3 32.456 114 72 3 1 111 294 405 1.29e-11 62.8
Msa0246730 AT1G56140.1 30.921 152 95 3 1 150 814 957 1.30e-11 62.8
Msa0246730 AT4G32000.1 32.456 114 72 3 1 111 251 362 1.32e-11 62.8
Msa0246730 AT4G32000.2 32.456 114 72 3 1 111 252 363 1.43e-11 62.4
Msa0246730 AT3G05140.2 28.571 147 93 4 6 150 317 453 1.43e-11 62.8
Msa0246730 AT1G07550.1 33.784 148 85 5 6 150 686 823 1.43e-11 62.8
Msa0246730 AT3G05140.1 27.632 152 98 4 1 150 264 405 1.54e-11 62.4
Msa0246730 AT3G14350.3 28.289 152 96 5 1 149 516 657 1.55e-11 62.8
Msa0246730 AT3G14350.2 28.289 152 96 5 1 149 507 648 1.59e-11 62.8
Msa0246730 AT2G23950.1 28.758 153 99 4 1 150 419 564 1.67e-11 62.4
Msa0246730 AT3G14350.1 28.289 152 96 5 1 149 544 685 1.78e-11 62.4
Msa0246730 AT3G13690.2 31.061 132 76 4 24 150 556 677 1.92e-11 62.4
Msa0246730 AT3G13690.1 31.061 132 76 4 24 150 556 677 1.92e-11 62.4
Msa0246730 AT3G13690.3 31.061 132 76 4 24 150 556 677 1.92e-11 62.4
Msa0246730 AT1G34210.1 26.623 154 102 4 1 150 429 575 2.28e-11 62.0
Msa0246730 AT1G34210.2 26.623 154 102 4 1 150 429 575 2.28e-11 62.0
Msa0246730 AT1G74490.1 38.384 99 59 1 6 102 220 318 2.64e-11 61.6
Msa0246730 AT2G16750.2 31.496 127 81 3 1 123 396 520 3.00e-11 61.6
Msa0246730 AT2G16750.1 31.496 127 81 3 1 123 396 520 3.00e-11 61.6
Msa0246730 AT5G45780.2 26.738 187 119 5 1 184 380 551 3.49e-11 61.6
Msa0246730 AT1G17230.2 27.922 154 99 7 1 150 923 1068 3.54e-11 61.6
Msa0246730 AT1G17230.1 27.922 154 99 7 1 150 923 1068 3.59e-11 61.6
Msa0246730 AT3G59350.4 31.858 113 75 1 1 111 242 354 3.96e-11 61.2
Msa0246730 AT1G16670.1 30.263 152 97 3 1 150 166 310 4.09e-11 61.2
Msa0246730 AT4G30520.1 28.758 153 99 4 1 150 423 568 4.22e-11 61.2
Msa0246730 AT5G45780.1 26.738 187 119 5 1 184 423 594 4.25e-11 61.2
Msa0246730 AT2G01820.1 27.568 185 111 5 6 185 716 882 4.73e-11 61.2
Msa0246730 AT1G71830.1 27.273 154 101 4 1 150 426 572 4.74e-11 61.2
Msa0246730 AT5G48740.1 30.769 156 97 6 1 153 729 876 4.97e-11 61.2
Msa0246730 AT1G29720.1 29.932 147 94 3 6 150 799 938 8.29e-11 60.5

Find 40 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTCATATGGCACAAATT+TGG 0.185963 2_2:+28265823 None:intergenic
GTGATGGCAGGGAGGACTTA+TGG 0.336511 2_2:-28265785 Msa0246730:CDS
GGAGTTTGGAGCGCACCTTA+TGG 0.362432 2_2:-28265858 Msa0246730:CDS
ATATAAGGATCCAAGAGTTC+AGG 0.364706 2_2:+28265582 None:intergenic
GACGAGGAAGATATAATATA+AGG 0.365230 2_2:+28265567 None:intergenic
TTCTGGATAGTACTCATCTT+TGG 0.366906 2_2:+28265531 None:intergenic
TTAACGATTGTAGACAAGTA+TGG 0.374113 2_2:-28265360 Msa0246730:CDS
GAGTTTGGAGCGCACCTTAT+GGG 0.378548 2_2:-28265857 Msa0246730:CDS
GTGCTGCTGGACGAGGAGTT+TGG 0.400321 2_2:-28265872 Msa0246730:CDS
CAAAGCAAAATTTGTGCTGC+TGG 0.419435 2_2:-28265885 Msa0246730:CDS
AGACAAGGTCAACCACCTTC+TGG 0.419954 2_2:+28265514 None:intergenic
CTCTCATGCATCGCTTCATA+TGG 0.423953 2_2:+28265812 None:intergenic
TTTGAACGTGTGACATTCTA+GGG 0.447445 2_2:+28265460 None:intergenic
GGAGCGCACCTTATGGGTGT+TGG 0.448775 2_2:-28265851 Msa0246730:CDS
GTTGGCAGAGTATATTTGAA+TGG 0.459965 2_2:-28265635 Msa0246730:CDS
ACACTACTCGAAATAGTTAG+TGG 0.470042 2_2:-28265690 Msa0246730:CDS
TCATCGCTACCCTGAACTCT+TGG 0.480687 2_2:-28265592 Msa0246730:CDS
AAAATTTGTGCTGCTGGACG+AGG 0.503250 2_2:-28265879 Msa0246730:CDS
TTGGCAGAGTATATTTGAAT+GGG 0.503697 2_2:-28265634 Msa0246730:CDS
ACATTCTAGGGCGCATAGAA+AGG 0.513239 2_2:+28265472 None:intergenic
TATAAGGATCCAAGAGTTCA+GGG 0.515035 2_2:+28265583 None:intergenic
CATGAGAGGACTGTGATGGC+AGG 0.520949 2_2:-28265797 Msa0246730:CDS
TGGACAAGCCAACACCCATA+AGG 0.547153 2_2:+28265843 None:intergenic
ACAGAATCAACTGCTTGTGC+TGG 0.557567 2_2:+28265660 None:intergenic
AAGCAGTTGATTCTGTGGGT+TGG 0.558849 2_2:-28265653 Msa0246730:CDS
TAAAACTACTGTCGCAGTTG+CGG 0.568140 2_2:-28265404 Msa0246730:CDS
TCGTTTCTGTACACAAACTC+TGG 0.576390 2_2:+28265752 None:intergenic
AGCACAAGCAGTTGATTCTG+TGG 0.580618 2_2:-28265658 Msa0246730:CDS
TAGCGATGAGCTTGAACAAG+AGG 0.587250 2_2:+28265606 None:intergenic
CATATGAAGCGATGCATGAG+AGG 0.590509 2_2:-28265811 Msa0246730:CDS
TCTACAATCGTTAAATCTCG+AGG 0.595881 2_2:+28265369 None:intergenic
CTAACTATTTCGAGTAGTGT+AGG 0.599700 2_2:+28265693 None:intergenic
GCACAAGCAGTTGATTCTGT+GGG 0.611876 2_2:-28265657 Msa0246730:CDS
AAAGATGAGTACTATCCAGA+AGG 0.633167 2_2:-28265529 Msa0246730:CDS
GATGAGTACTATCCAGAAGG+TGG 0.653317 2_2:-28265526 Msa0246730:CDS
ATGAGAGGACTGTGATGGCA+GGG 0.658298 2_2:-28265796 Msa0246730:CDS
TGGTATGATACTAGTAGACG+AGG 0.685492 2_2:+28265551 None:intergenic
GATGCATGAGAGGACTGTGA+TGG 0.695690 2_2:-28265801 Msa0246730:CDS
AGAGGACTGTGATGGCAGGG+AGG 0.704022 2_2:-28265793 Msa0246730:CDS
ACTGCGTGCATGAATAGACA+AGG 0.717774 2_2:+28265499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGGTCTTATTTAATATATAA+TGG + chr2_2:28265434-28265453 None:intergenic 15.0%
!!! ATTATAATTTTTTTTTTGGG+TGG + chr2_2:28265744-28265763 None:intergenic 15.0%
!!! GGCATTATAATTTTTTTTTT+GGG + chr2_2:28265747-28265766 None:intergenic 15.0%
!!! TGGCATTATAATTTTTTTTT+TGG + chr2_2:28265748-28265767 None:intergenic 15.0%
!!! ATAATTTGTTATAACAAGAA+CGG + chr2_2:28265777-28265796 None:intergenic 15.0%
!!! TGATTATTTGATTTGTTTAA+CGG - chr2_2:28265917-28265936 Msa0246730:intron 15.0%
!!! TCAAAAACTATTTTGAAATT+TGG - chr2_2:28266180-28266199 Msa0246730:intron 15.0%
!!! AGGTCTTATTTAATATATAA+TGG + chr2_2:28265434-28265453 None:intergenic 15.0%
!!! ATTATAATTTTTTTTTTGGG+TGG + chr2_2:28265744-28265763 None:intergenic 15.0%
!!! GGCATTATAATTTTTTTTTT+GGG + chr2_2:28265747-28265766 None:intergenic 15.0%
!!! TGGCATTATAATTTTTTTTT+TGG + chr2_2:28265748-28265767 None:intergenic 15.0%
!!! ATAATTTGTTATAACAAGAA+CGG + chr2_2:28265777-28265796 None:intergenic 15.0%
!!! TGATTATTTGATTTGTTTAA+CGG - chr2_2:28265917-28265936 Msa0246730:intron 15.0%
!!! TCAAAAACTATTTTGAAATT+TGG - chr2_2:28266180-28266199 Msa0246730:intron 15.0%
!! AACAAATCAAATAATCACAT+AGG + chr2_2:28265914-28265933 None:intergenic 20.0%
!!! TTTGAAATTTGGATTCATTT+AGG - chr2_2:28266191-28266210 Msa0246730:intron 20.0%
!! AACAAATCAAATAATCACAT+AGG + chr2_2:28265914-28265933 None:intergenic 20.0%
!!! TTTGAAATTTGGATTCATTT+AGG - chr2_2:28266191-28266210 Msa0246730:intron 20.0%
! AATTATATATGTTGTGAGTG+TGG - chr2_2:28265474-28265493 Msa0246730:CDS 25.0%
! GAATATGCATAAAATATGCA+AGG - chr2_2:28265696-28265715 Msa0246730:CDS 25.0%
!!! ATAATTTTTTTTTTGGGTGG+TGG + chr2_2:28265741-28265760 None:intergenic 25.0%
! TTTATAGAAAGACGAATTAC+AGG + chr2_2:28265880-28265899 None:intergenic 25.0%
!!! CTAAGTGAAGCTTTATTTAA+GGG - chr2_2:28265940-28265959 Msa0246730:intron 25.0%
!!! TAAGTGAAGCTTTATTTAAG+GGG - chr2_2:28265941-28265960 Msa0246730:intron 25.0%
! ACAATAAGTAAGTATGTTGA+TGG + chr2_2:28266115-28266134 None:intergenic 25.0%
!!! TAGTTTTAAAACTACAGTCA+TGG + chr2_2:28266845-28266864 None:intergenic 25.0%
! AATTATATATGTTGTGAGTG+TGG - chr2_2:28265474-28265493 Msa0246730:CDS 25.0%
! GAATATGCATAAAATATGCA+AGG - chr2_2:28265696-28265715 Msa0246730:CDS 25.0%
!!! ATAATTTTTTTTTTGGGTGG+TGG + chr2_2:28265741-28265760 None:intergenic 25.0%
! TTTATAGAAAGACGAATTAC+AGG + chr2_2:28265880-28265899 None:intergenic 25.0%
!!! CTAAGTGAAGCTTTATTTAA+GGG - chr2_2:28265940-28265959 Msa0246730:intron 25.0%
!!! TAAGTGAAGCTTTATTTAAG+GGG - chr2_2:28265941-28265960 Msa0246730:intron 25.0%
! ACAATAAGTAAGTATGTTGA+TGG + chr2_2:28266115-28266134 None:intergenic 25.0%
!!! TAGTTTTAAAACTACAGTCA+TGG + chr2_2:28266845-28266864 None:intergenic 25.0%
TATAACAAGAACGGAATTCA+TGG + chr2_2:28265768-28265787 None:intergenic 30.0%
!! GCTAAGTGAAGCTTTATTTA+AGG - chr2_2:28265939-28265958 Msa0246730:intron 30.0%
GGTTTAGTACTGTTAATTCT+TGG + chr2_2:28266327-28266346 None:intergenic 30.0%
ATTAACAGTACTAAACCTGA+AGG - chr2_2:28266330-28266349 Msa0246730:intron 30.0%
! AAGAGTGACGTTTATAGTTT+TGG - chr2_2:28266542-28266561 Msa0246730:intron 30.0%
TTGGCAGAGTATATTTGAAT+GGG - chr2_2:28266627-28266646 Msa0246730:intron 30.0%
GACGAGGAAGATATAATATA+AGG + chr2_2:28266697-28266716 None:intergenic 30.0%
TTAACGATTGTAGACAAGTA+TGG - chr2_2:28266901-28266920 Msa0246730:intron 30.0%
TATAACAAGAACGGAATTCA+TGG + chr2_2:28265768-28265787 None:intergenic 30.0%
!! GCTAAGTGAAGCTTTATTTA+AGG - chr2_2:28265939-28265958 Msa0246730:intron 30.0%
GGTTTAGTACTGTTAATTCT+TGG + chr2_2:28266327-28266346 None:intergenic 30.0%
ATTAACAGTACTAAACCTGA+AGG - chr2_2:28266330-28266349 Msa0246730:intron 30.0%
! AAGAGTGACGTTTATAGTTT+TGG - chr2_2:28266542-28266561 Msa0246730:intron 30.0%
TTGGCAGAGTATATTTGAAT+GGG - chr2_2:28266627-28266646 Msa0246730:intron 30.0%
GACGAGGAAGATATAATATA+AGG + chr2_2:28266697-28266716 None:intergenic 30.0%
TTAACGATTGTAGACAAGTA+TGG - chr2_2:28266901-28266920 Msa0246730:intron 30.0%
! TATAGAGCTAATTTGTACGC+AGG + chr2_2:28265402-28265421 None:intergenic 35.0%
CAAAAACACACAACACACAT+AGG + chr2_2:28265454-28265473 None:intergenic 35.0%
TGATGTAACTTCTGCAAGAA+AGG + chr2_2:28265568-28265587 None:intergenic 35.0%
! TGAGCTTAACTCAGTTGATA+GGG - chr2_2:28265674-28265693 Msa0246730:CDS 35.0%
GACTACTACTTACACATTCA+GGG + chr2_2:28265983-28266002 None:intergenic 35.0%
TGACTACTACTTACACATTC+AGG + chr2_2:28265984-28266003 None:intergenic 35.0%
! CTTTTCAGACCTCTATAAGT+AGG - chr2_2:28266269-28266288 Msa0246730:intron 35.0%
ATTCTTGGAATGACTTTAGC+AGG + chr2_2:28266312-28266331 None:intergenic 35.0%
! AGCAGCACAAATTTTGCTTT+GGG + chr2_2:28266377-28266396 None:intergenic 35.0%
! CTAACTATTTCGAGTAGTGT+AGG + chr2_2:28266571-28266590 None:intergenic 35.0%
ACACTACTCGAAATAGTTAG+TGG - chr2_2:28266571-28266590 Msa0246730:intron 35.0%
GTTGGCAGAGTATATTTGAA+TGG - chr2_2:28266626-28266645 Msa0246730:intron 35.0%
TATAAGGATCCAAGAGTTCA+GGG + chr2_2:28266681-28266700 None:intergenic 35.0%
ATATAAGGATCCAAGAGTTC+AGG + chr2_2:28266682-28266701 None:intergenic 35.0%
TTCTGGATAGTACTCATCTT+TGG + chr2_2:28266733-28266752 None:intergenic 35.0%
AAAGATGAGTACTATCCAGA+AGG - chr2_2:28266732-28266751 Msa0246730:intron 35.0%
TTTGAACGTGTGACATTCTA+GGG + chr2_2:28266804-28266823 None:intergenic 35.0%
! TTTTGAACGTGTGACATTCT+AGG + chr2_2:28266805-28266824 None:intergenic 35.0%
TCTACAATCGTTAAATCTCG+AGG + chr2_2:28266895-28266914 None:intergenic 35.0%
! TATAGAGCTAATTTGTACGC+AGG + chr2_2:28265402-28265421 None:intergenic 35.0%
CAAAAACACACAACACACAT+AGG + chr2_2:28265454-28265473 None:intergenic 35.0%
TGATGTAACTTCTGCAAGAA+AGG + chr2_2:28265568-28265587 None:intergenic 35.0%
! TGAGCTTAACTCAGTTGATA+GGG - chr2_2:28265674-28265693 Msa0246730:CDS 35.0%
GACTACTACTTACACATTCA+GGG + chr2_2:28265983-28266002 None:intergenic 35.0%
TGACTACTACTTACACATTC+AGG + chr2_2:28265984-28266003 None:intergenic 35.0%
! CTTTTCAGACCTCTATAAGT+AGG - chr2_2:28266269-28266288 Msa0246730:intron 35.0%
ATTCTTGGAATGACTTTAGC+AGG + chr2_2:28266312-28266331 None:intergenic 35.0%
! AGCAGCACAAATTTTGCTTT+GGG + chr2_2:28266377-28266396 None:intergenic 35.0%
! CTAACTATTTCGAGTAGTGT+AGG + chr2_2:28266571-28266590 None:intergenic 35.0%
ACACTACTCGAAATAGTTAG+TGG - chr2_2:28266571-28266590 Msa0246730:intron 35.0%
GTTGGCAGAGTATATTTGAA+TGG - chr2_2:28266626-28266645 Msa0246730:intron 35.0%
TATAAGGATCCAAGAGTTCA+GGG + chr2_2:28266681-28266700 None:intergenic 35.0%
ATATAAGGATCCAAGAGTTC+AGG + chr2_2:28266682-28266701 None:intergenic 35.0%
TTCTGGATAGTACTCATCTT+TGG + chr2_2:28266733-28266752 None:intergenic 35.0%
AAAGATGAGTACTATCCAGA+AGG - chr2_2:28266732-28266751 Msa0246730:intron 35.0%
TTTGAACGTGTGACATTCTA+GGG + chr2_2:28266804-28266823 None:intergenic 35.0%
! TTTTGAACGTGTGACATTCT+AGG + chr2_2:28266805-28266824 None:intergenic 35.0%
TCTACAATCGTTAAATCTCG+AGG + chr2_2:28266895-28266914 None:intergenic 35.0%
TCAACTGAGTTAAGCTCACA+AGG + chr2_2:28265672-28265691 None:intergenic 40.0%
GTGAGCTTAACTCAGTTGAT+AGG - chr2_2:28265673-28265692 Msa0246730:CDS 40.0%
CATAAAATATGCAAGGTCCG+AGG - chr2_2:28265703-28265722 Msa0246730:CDS 40.0%
!! TGTCAGACTTGTTGTACAAC+TGG + chr2_2:28266230-28266249 None:intergenic 40.0%
CTTGTGCAACCTACTTATAG+AGG + chr2_2:28266281-28266300 None:intergenic 40.0%
! CAGCAGCACAAATTTTGCTT+TGG + chr2_2:28266378-28266397 None:intergenic 40.0%
CAAAGCAAAATTTGTGCTGC+TGG - chr2_2:28266376-28266395 Msa0246730:intron 40.0%
CGCTTCATATGGCACAAATT+TGG + chr2_2:28266441-28266460 None:intergenic 40.0%
TCGTTTCTGTACACAAACTC+TGG + chr2_2:28266512-28266531 None:intergenic 40.0%
TGGTATGATACTAGTAGACG+AGG + chr2_2:28266713-28266732 None:intergenic 40.0%
TAAAACTACTGTCGCAGTTG+CGG - chr2_2:28266857-28266876 Msa0246730:intron 40.0%
TCAACTGAGTTAAGCTCACA+AGG + chr2_2:28265672-28265691 None:intergenic 40.0%
GTGAGCTTAACTCAGTTGAT+AGG - chr2_2:28265673-28265692 Msa0246730:CDS 40.0%
CATAAAATATGCAAGGTCCG+AGG - chr2_2:28265703-28265722 Msa0246730:CDS 40.0%
!! TGTCAGACTTGTTGTACAAC+TGG + chr2_2:28266230-28266249 None:intergenic 40.0%
CTTGTGCAACCTACTTATAG+AGG + chr2_2:28266281-28266300 None:intergenic 40.0%
! CAGCAGCACAAATTTTGCTT+TGG + chr2_2:28266378-28266397 None:intergenic 40.0%
CAAAGCAAAATTTGTGCTGC+TGG - chr2_2:28266376-28266395 Msa0246730:intron 40.0%
CGCTTCATATGGCACAAATT+TGG + chr2_2:28266441-28266460 None:intergenic 40.0%
TCGTTTCTGTACACAAACTC+TGG + chr2_2:28266512-28266531 None:intergenic 40.0%
TGGTATGATACTAGTAGACG+AGG + chr2_2:28266713-28266732 None:intergenic 40.0%
TAAAACTACTGTCGCAGTTG+CGG - chr2_2:28266857-28266876 Msa0246730:intron 40.0%
TCTGAAAAGTCACCAGCTAC+GGG + chr2_2:28266258-28266277 None:intergenic 45.0%
GTCTGAAAAGTCACCAGCTA+CGG + chr2_2:28266259-28266278 None:intergenic 45.0%
CAGTACTAAACCTGAAGGTG+AGG - chr2_2:28266335-28266354 Msa0246730:intron 45.0%
TTCTTCTCATCCTCACCTTC+AGG + chr2_2:28266348-28266367 None:intergenic 45.0%
! AAAATTTGTGCTGCTGGACG+AGG - chr2_2:28266382-28266401 Msa0246730:intron 45.0%
CTCTCATGCATCGCTTCATA+TGG + chr2_2:28266452-28266471 None:intergenic 45.0%
CATATGAAGCGATGCATGAG+AGG - chr2_2:28266450-28266469 Msa0246730:intron 45.0%
ACAGAATCAACTGCTTGTGC+TGG + chr2_2:28266604-28266623 None:intergenic 45.0%
! AGCACAAGCAGTTGATTCTG+TGG - chr2_2:28266603-28266622 Msa0246730:intron 45.0%
! GCACAAGCAGTTGATTCTGT+GGG - chr2_2:28266604-28266623 Msa0246730:intron 45.0%
! AAGCAGTTGATTCTGTGGGT+TGG - chr2_2:28266608-28266627 Msa0246730:intron 45.0%
TAGCGATGAGCTTGAACAAG+AGG + chr2_2:28266658-28266677 None:intergenic 45.0%
GATGAGTACTATCCAGAAGG+TGG - chr2_2:28266735-28266754 Msa0246730:intron 45.0%
ACTGCGTGCATGAATAGACA+AGG + chr2_2:28266765-28266784 None:intergenic 45.0%
!! ACATTCTAGGGCGCATAGAA+AGG + chr2_2:28266792-28266811 None:intergenic 45.0%
TCTGAAAAGTCACCAGCTAC+GGG + chr2_2:28266258-28266277 None:intergenic 45.0%
GTCTGAAAAGTCACCAGCTA+CGG + chr2_2:28266259-28266278 None:intergenic 45.0%
CAGTACTAAACCTGAAGGTG+AGG - chr2_2:28266335-28266354 Msa0246730:intron 45.0%
TTCTTCTCATCCTCACCTTC+AGG + chr2_2:28266348-28266367 None:intergenic 45.0%
! AAAATTTGTGCTGCTGGACG+AGG - chr2_2:28266382-28266401 Msa0246730:intron 45.0%
CTCTCATGCATCGCTTCATA+TGG + chr2_2:28266452-28266471 None:intergenic 45.0%
CATATGAAGCGATGCATGAG+AGG - chr2_2:28266450-28266469 Msa0246730:intron 45.0%
ACAGAATCAACTGCTTGTGC+TGG + chr2_2:28266604-28266623 None:intergenic 45.0%
! AGCACAAGCAGTTGATTCTG+TGG - chr2_2:28266603-28266622 Msa0246730:intron 45.0%
! GCACAAGCAGTTGATTCTGT+GGG - chr2_2:28266604-28266623 Msa0246730:intron 45.0%
! AAGCAGTTGATTCTGTGGGT+TGG - chr2_2:28266608-28266627 Msa0246730:intron 45.0%
TAGCGATGAGCTTGAACAAG+AGG + chr2_2:28266658-28266677 None:intergenic 45.0%
GATGAGTACTATCCAGAAGG+TGG - chr2_2:28266735-28266754 Msa0246730:intron 45.0%
ACTGCGTGCATGAATAGACA+AGG + chr2_2:28266765-28266784 None:intergenic 45.0%
!! ACATTCTAGGGCGCATAGAA+AGG + chr2_2:28266792-28266811 None:intergenic 45.0%
AAGGTCCGAGGTTCGAATCA+CGG - chr2_2:28265715-28265734 Msa0246730:intron 50.0%
CTGAAAAGTCACCAGCTACG+GGG + chr2_2:28266257-28266276 None:intergenic 50.0%
! GAGTTTGGAGCGCACCTTAT+GGG - chr2_2:28266404-28266423 Msa0246730:intron 50.0%
TGGACAAGCCAACACCCATA+AGG + chr2_2:28266421-28266440 None:intergenic 50.0%
GATGCATGAGAGGACTGTGA+TGG - chr2_2:28266460-28266479 Msa0246730:intron 50.0%
ATGAGAGGACTGTGATGGCA+GGG - chr2_2:28266465-28266484 Msa0246730:intron 50.0%
TCATCGCTACCCTGAACTCT+TGG - chr2_2:28266669-28266688 Msa0246730:intron 50.0%
AGACAAGGTCAACCACCTTC+TGG + chr2_2:28266750-28266769 None:intergenic 50.0%
AAGGTCCGAGGTTCGAATCA+CGG - chr2_2:28265715-28265734 Msa0246730:intron 50.0%
CTGAAAAGTCACCAGCTACG+GGG + chr2_2:28266257-28266276 None:intergenic 50.0%
! GAGTTTGGAGCGCACCTTAT+GGG - chr2_2:28266404-28266423 Msa0246730:intron 50.0%
TGGACAAGCCAACACCCATA+AGG + chr2_2:28266421-28266440 None:intergenic 50.0%
GATGCATGAGAGGACTGTGA+TGG - chr2_2:28266460-28266479 Msa0246730:intron 50.0%
ATGAGAGGACTGTGATGGCA+GGG - chr2_2:28266465-28266484 Msa0246730:intron 50.0%
TCATCGCTACCCTGAACTCT+TGG - chr2_2:28266669-28266688 Msa0246730:intron 50.0%
AGACAAGGTCAACCACCTTC+TGG + chr2_2:28266750-28266769 None:intergenic 50.0%
! GGAGTTTGGAGCGCACCTTA+TGG - chr2_2:28266403-28266422 Msa0246730:intron 55.0%
CATGAGAGGACTGTGATGGC+AGG - chr2_2:28266464-28266483 Msa0246730:intron 55.0%
GTGATGGCAGGGAGGACTTA+TGG - chr2_2:28266476-28266495 Msa0246730:intron 55.0%
! GGAGTTTGGAGCGCACCTTA+TGG - chr2_2:28266403-28266422 Msa0246730:intron 55.0%
CATGAGAGGACTGTGATGGC+AGG - chr2_2:28266464-28266483 Msa0246730:intron 55.0%
GTGATGGCAGGGAGGACTTA+TGG - chr2_2:28266476-28266495 Msa0246730:intron 55.0%
GGTGGCCGTGATTCGAACCT+CGG + chr2_2:28265723-28265742 None:intergenic 60.0%
TCTGACAGTGACCCCGTAGC+TGG - chr2_2:28266243-28266262 Msa0246730:intron 60.0%
! GTGCTGCTGGACGAGGAGTT+TGG - chr2_2:28266389-28266408 Msa0246730:intron 60.0%
GGAGCGCACCTTATGGGTGT+TGG - chr2_2:28266410-28266429 Msa0246730:intron 60.0%
AGAGGACTGTGATGGCAGGG+AGG - chr2_2:28266468-28266487 Msa0246730:intron 60.0%
GGTGGCCGTGATTCGAACCT+CGG + chr2_2:28265723-28265742 None:intergenic 60.0%
TCTGACAGTGACCCCGTAGC+TGG - chr2_2:28266243-28266262 Msa0246730:intron 60.0%
! GTGCTGCTGGACGAGGAGTT+TGG - chr2_2:28266389-28266408 Msa0246730:intron 60.0%
GGAGCGCACCTTATGGGTGT+TGG - chr2_2:28266410-28266429 Msa0246730:intron 60.0%
AGAGGACTGTGATGGCAGGG+AGG - chr2_2:28266468-28266487 Msa0246730:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 28265356 28266927 28265356 ID=Msa0246730;Name=Msa0246730
chr2_2 mRNA 28265356 28266927 28265356 ID=Msa0246730-mRNA-1;Parent=Msa0246730;Name=Msa0246730-mRNA-1;_AED=0.55;_eAED=0.56;_QI=0|0|0|0.66|0.5|0.33|3|0|185
chr2_2 exon 28266924 28266927 28266924 ID=Msa0246730-mRNA-1:exon:10214;Parent=Msa0246730-mRNA-1
chr2_2 exon 28265733 28265917 28265733 ID=Msa0246730-mRNA-1:exon:10213;Parent=Msa0246730-mRNA-1
chr2_2 exon 28265356 28265724 28265356 ID=Msa0246730-mRNA-1:exon:10212;Parent=Msa0246730-mRNA-1
chr2_2 CDS 28266924 28266927 28266924 ID=Msa0246730-mRNA-1:cds;Parent=Msa0246730-mRNA-1
chr2_2 CDS 28265733 28265917 28265733 ID=Msa0246730-mRNA-1:cds;Parent=Msa0246730-mRNA-1
chr2_2 CDS 28265356 28265724 28265356 ID=Msa0246730-mRNA-1:cds;Parent=Msa0246730-mRNA-1
Gene Sequence

>Msa0246730

ATGGAACAAAATCCCAAAGCAAAATTTGTGCTGCTGGACGAGGAGTTTGGAGCGCACCTTATGGGTGTTGGCTTGTCCAAATTTGTGCCATATGAAGCGATGCATGAGAGGACTGTGATGGCAGGGAGGACTTATGGATATCTTGCTCCAGAGTTTGTGTACAGAAACGAGCTTACAACAAAGAGTGACTTTTGGTGTCCTACACTACTCGAAATAGTTAGTGGACGTAGACCAGCACAAGCAGTTGATTCTGTGGGTTGGCAGAGTATATTTGAATGGGCTACACCTCTTGTTCAAGCTCATCGCTACCCTGAACTCTTGGATCCTTATATTATATCTTCCTCGTCTACTAGTATCATACCAAAGATGAGTACTATCCAGAAGGTGGTTGACCTTGTCTATTCATGCACGCAGTATGTCCTTTCTATGCGCCCTAGAATGTCACACGTTCAAAATAAAGCTAATTTAGTTGCCATGACTGTAGTTTTAAAACTACTGTCGCAGTTGCGGTTACATTACAATCCTCGAGATTTAACGATTGTAGACAAGTATGGCTGA
Protein sequence

>Msa0246730

MEQNPKAKFVLLDEEFGAHLMGVGLSKFVPYEAMHERTVMAGRTYGYLAPEFVYRNELTTKSDFWCPTLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPYIISSSSTSIIPKMSTIQKVVDLVYSCTQYVLSMRPRMSHVQNKANLVAMTVVLKLLSQLRLHYNPRDLTIVDKYG*