Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247510 | XP_039686054.1 | 81.343 | 134 | 13 | 3 | 20 | 141 | 91 | 224 | 7.53e-60 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247510 | G7IST9 | 81.343 | 134 | 13 | 3 | 20 | 141 | 127 | 260 | 3.28e-59 | 195 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0247510 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247510 | MtrunA17_Chr1g0162721 | 68.889 | 135 | 29 | 3 | 20 | 141 | 152 | 286 | 3.26e-47 | 156 |
| Msa0247510 | MtrunA17_Chr2g0302481 | 52.027 | 148 | 40 | 4 | 20 | 161 | 60 | 182 | 3.19e-33 | 116 |
| Msa0247510 | MtrunA17_Chr4g0065261 | 38.462 | 130 | 64 | 4 | 12 | 141 | 41 | 154 | 7.10e-14 | 66.2 |
| Msa0247510 | MtrunA17_Chr8g0373571 | 44.776 | 67 | 37 | 0 | 74 | 140 | 257 | 323 | 5.59e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGACTGGCACAGAATTT+AGG | 0.199471 | 2_2:+29903361 | Msa0247510:CDS |
| CTGGACTGGCACAGAATTTA+GGG | 0.316281 | 2_2:+29903362 | Msa0247510:CDS |
| CTTAAATTGATGATCAACTA+TGG | 0.337225 | 2_2:-29901241 | None:intergenic |
| GCTCAGTGAGCGTTTGTGTT+AGG | 0.338250 | 2_2:-29904324 | None:intergenic |
| GTTGATCATCAATTTAAGAT+TGG | 0.361999 | 2_2:+29901246 | Msa0247510:CDS |
| TTGATCATCAATTTAAGATT+GGG | 0.395398 | 2_2:+29901247 | Msa0247510:CDS |
| TCAAAAGATAAACACTCTTA+AGG | 0.430729 | 2_2:+29904288 | Msa0247510:CDS |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | 2_2:+29903932 | Msa0247510:CDS |
| TTTGTTGTAGAAAATCCATC+TGG | 0.453963 | 2_2:+29903343 | Msa0247510:intron |
| TTCATTCCAAATCCCAAAAC+GGG | 0.456853 | 2_2:-29906473 | None:intergenic |
| AGTTTCATAGTTGTGAGAAT+GGG | 0.473047 | 2_2:+29906507 | Msa0247510:CDS |
| CTTTATGTTAGCAGTGCAGC+AGG | 0.473512 | 2_2:+29903103 | Msa0247510:intron |
| GAGTTTCATAGTTGTGAGAA+TGG | 0.483760 | 2_2:+29906506 | Msa0247510:CDS |
| CTTCATTCCAAATCCCAAAA+CGG | 0.484290 | 2_2:-29906474 | None:intergenic |
| AAATTCTGTGCCAGTCCAGA+TGG | 0.537974 | 2_2:-29903358 | None:intergenic |
| CAATGAAAACGATTCTATTG+AGG | 0.546332 | 2_2:+29904372 | Msa0247510:CDS |
| GGAAGCAAGAGATCGACAGA+TGG | 0.554192 | 2_2:+29903127 | Msa0247510:CDS |
| GCAGACATCAATGGCTCAAG+AGG | 0.556539 | 2_2:+29901197 | None:intergenic |
| TTATGTCTTCAGCGACGGAA+AGG | 0.562383 | 2_2:+29906440 | Msa0247510:intron |
| TCGAAGCAGATTACTGAGGA+TGG | 0.574277 | 2_2:+29903181 | Msa0247510:CDS |
| TGTAGAAAATCCATCTGGAC+TGG | 0.593923 | 2_2:+29903348 | Msa0247510:intron |
| AGTGAGCGTTTGTGTTAGGA+CGG | 0.605256 | 2_2:-29904320 | None:intergenic |
| CAGACATCAATGGCTCAAGA+GGG | 0.613094 | 2_2:+29901198 | None:intergenic |
| GAATTTAGGGACAGTCGTCA+AGG | 0.617946 | 2_2:+29903375 | Msa0247510:CDS |
| TTCCAAATCCCAAAACGGGT+CGG | 0.629169 | 2_2:-29906469 | None:intergenic |
| TATGTTAGCAGTGCAGCAGG+TGG | 0.639981 | 2_2:+29903106 | Msa0247510:intron |
| AGACATCAATGGCTCAAGAG+GGG | 0.679742 | 2_2:+29901199 | None:intergenic |
| TTTATCGAAGCAGATTACTG+AGG | 0.687115 | 2_2:+29903177 | Msa0247510:CDS |
| GTGAGAATGGGATTTCGTCG+CGG | 0.710063 | 2_2:+29906519 | Msa0247510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTTATTTTTTAT+GGG | - | chr2_2:29901506-29901525 | None:intergenic | 0.0% |
| !!! | TTTTAAATCATAATAAAACA+TGG | - | chr2_2:29903251-29903270 | None:intergenic | 10.0% |
| !! | TAATTAAAAAAATCAAAGTA+GGG | - | chr2_2:29904171-29904190 | None:intergenic | 10.0% |
| !! | ATAATTAAAAAAATCAAAGT+AGG | - | chr2_2:29904172-29904191 | None:intergenic | 10.0% |
| !!! | CTATTGTTTTTTTAAATTTA+TGG | - | chr2_2:29905607-29905626 | None:intergenic | 10.0% |
| !! | AAATATATAAAGAATGAAAA+TGG | + | chr2_2:29906203-29906222 | Msa0247510:intron | 10.0% |
| !!! | AAATAAAACTTTGTATTGAT+AGG | + | chr2_2:29901363-29901382 | Msa0247510:intron | 15.0% |
| !! | AATTAATGATGTAAAACTTA+AGG | - | chr2_2:29902147-29902166 | None:intergenic | 15.0% |
| !! | TTAAATGAAGTAATAGATAA+GGG | - | chr2_2:29902560-29902579 | None:intergenic | 15.0% |
| !!! | TTTGTATCAATTTTGTAATT+TGG | + | chr2_2:29902620-29902639 | Msa0247510:intron | 15.0% |
| !!! | CAAATAAATATTTTTCCAAA+CGG | + | chr2_2:29903039-29903058 | Msa0247510:intron | 15.0% |
| !!! | AATTTTAAAATTTAACCGTT+TGG | - | chr2_2:29903057-29903076 | None:intergenic | 15.0% |
| !! | TTTGTTTATAAATTCTACTA+CGG | - | chr2_2:29903563-29903582 | None:intergenic | 15.0% |
| !! | AAATGTAAAAAGAAAAAATG+TGG | + | chr2_2:29904114-29904133 | Msa0247510:intron | 15.0% |
| !! | AATGTAAAAAGAAAAAATGT+GGG | + | chr2_2:29904115-29904134 | Msa0247510:intron | 15.0% |
| !! | AATTAAAAAAATCAAAGTAG+GGG | - | chr2_2:29904170-29904189 | None:intergenic | 15.0% |
| !! | TAAAATTGAACAAATAAGAA+GGG | - | chr2_2:29904414-29904433 | None:intergenic | 15.0% |
| !! | ATAAAATTGAACAAATAAGA+AGG | - | chr2_2:29904415-29904434 | None:intergenic | 15.0% |
| !! | ATTATTGTTCAATTAGAAAA+AGG | + | chr2_2:29904476-29904495 | Msa0247510:intron | 15.0% |
| !!! | GTGATAAGATATTTTTTTTT+TGG | - | chr2_2:29904937-29904956 | None:intergenic | 15.0% |
| !! | TTGATATCTATATTACTAAA+AGG | + | chr2_2:29904962-29904981 | Msa0247510:intron | 15.0% |
| !!! | ATGTTTGAAATTTTCTATTA+TGG | - | chr2_2:29905368-29905387 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTTAAGGAAGTT+TGG | - | chr2_2:29905416-29905435 | None:intergenic | 15.0% |
| !!! | GCTTTAAAGTATAATAAATA+TGG | + | chr2_2:29905983-29906002 | Msa0247510:intron | 15.0% |
| !!! | TTGATCATCAATTTAAGATT+GGG | + | chr2_2:29901247-29901266 | Msa0247510:CDS | 20.0% |
| !! | GAATATAATAACGTTGTATT+GGG | - | chr2_2:29901435-29901454 | None:intergenic | 20.0% |
| !! | ATGAAGAAAATTTAGTTGAA+AGG | + | chr2_2:29902233-29902252 | Msa0247510:intron | 20.0% |
| !! | TGAAGAAAATTTAGTTGAAA+GGG | + | chr2_2:29902234-29902253 | Msa0247510:intron | 20.0% |
| !!! | AAGTCTACAACTTTTTTTTT+TGG | - | chr2_2:29902350-29902369 | None:intergenic | 20.0% |
| !! | AAAAAAGTTGTAGACTTTAT+TGG | + | chr2_2:29902353-29902372 | Msa0247510:intron | 20.0% |
| !!! | TTGTTGTTGTTTTTTATTCA+GGG | - | chr2_2:29902393-29902412 | None:intergenic | 20.0% |
| !!! | TTTGTTGTTGTTTTTTATTC+AGG | - | chr2_2:29902394-29902413 | None:intergenic | 20.0% |
| !!! | ACATATTTTTCTTATGTGTA+AGG | + | chr2_2:29902503-29902522 | Msa0247510:intron | 20.0% |
| !! | CTTAAATGAAGTAATAGATA+AGG | - | chr2_2:29902561-29902580 | None:intergenic | 20.0% |
| !! | TGCTATCAAATTGATATAAA+AGG | + | chr2_2:29902686-29902705 | Msa0247510:intron | 20.0% |
| !!! | GTTCTTTGATTTTTTATTTC+TGG | - | chr2_2:29902741-29902760 | None:intergenic | 20.0% |
| !! | TGATGCTAAACTAAAAAATA+TGG | + | chr2_2:29903426-29903445 | Msa0247510:intron | 20.0% |
| !! | GAATATGATTATAACTATAG+TGG | - | chr2_2:29903625-29903644 | None:intergenic | 20.0% |
| !!! | TGGTAACATTTTAACATAAA+AGG | - | chr2_2:29903760-29903779 | None:intergenic | 20.0% |
| !! | ATGTAAAAAGAAAAAATGTG+GGG | + | chr2_2:29904116-29904135 | Msa0247510:intron | 20.0% |
| !!! | TACTAATTTAAAGTGTGATT+TGG | + | chr2_2:29904588-29904607 | Msa0247510:intron | 20.0% |
| !!! | ATAATTTTTTTTATTTGGGC+TGG | + | chr2_2:29904784-29904803 | Msa0247510:intron | 20.0% |
| !!! | ATTCCTATTCAATCTTTTAA+AGG | + | chr2_2:29905339-29905358 | Msa0247510:intron | 20.0% |
| !!! | ATACCTTTAAAAGATTGAAT+AGG | - | chr2_2:29905345-29905364 | None:intergenic | 20.0% |
| !!! | TAATATTTTTCCCTTTTCTA+GGG | - | chr2_2:29905517-29905536 | None:intergenic | 20.0% |
| !!! | TTAAAGCTTTATTATAGACT+TGG | - | chr2_2:29905970-29905989 | None:intergenic | 20.0% |
| !! | AATAATACGAATAAGAAACA+AGG | + | chr2_2:29906080-29906099 | Msa0247510:intron | 20.0% |
| !! | ATAATACGAATAAGAAACAA+GGG | + | chr2_2:29906081-29906100 | Msa0247510:intron | 20.0% |
| !! | TGCATGAAGAAAAAAAAAAA+CGG | + | chr2_2:29906110-29906129 | Msa0247510:intron | 20.0% |
| !! | TGATATTATCAACATATCAT+TGG | - | chr2_2:29906263-29906282 | None:intergenic | 20.0% |
| !! | TAAATTAACATATCATTGGT+TGG | - | chr2_2:29906297-29906316 | None:intergenic | 20.0% |
| !! | AGCATAAATTAACATATCAT+TGG | - | chr2_2:29906301-29906320 | None:intergenic | 20.0% |
| !! | CTTAAATTGATGATCAACTA+TGG | - | chr2_2:29901244-29901263 | None:intergenic | 25.0% |
| !! | GTTGATCATCAATTTAAGAT+TGG | + | chr2_2:29901246-29901265 | Msa0247510:CDS | 25.0% |
| ! | TTTATGCCTTTGAATATGTT+GGG | - | chr2_2:29901346-29901365 | None:intergenic | 25.0% |
| ! | ATTTATGCCTTTGAATATGT+TGG | - | chr2_2:29901347-29901366 | None:intergenic | 25.0% |
| ! | CGAATATAATAACGTTGTAT+TGG | - | chr2_2:29901436-29901455 | None:intergenic | 25.0% |
| !!! | AACAAATTTTGTTGATTGCA+AGG | + | chr2_2:29901529-29901548 | Msa0247510:intron | 25.0% |
| ! | ATTTAGGTCAGGTTATATTT+GGG | - | chr2_2:29901712-29901731 | None:intergenic | 25.0% |
| ! | AATTTAGGTCAGGTTATATT+TGG | - | chr2_2:29901713-29901732 | None:intergenic | 25.0% |
| ! | TTAGACTCATACTTGAATTT+AGG | - | chr2_2:29901728-29901747 | None:intergenic | 25.0% |
| !!! | AAATTACAATTTTTTCGAGC+AGG | - | chr2_2:29901833-29901852 | None:intergenic | 25.0% |
| !!! | TGGGTTTGACATAAATTTTT+TGG | + | chr2_2:29902031-29902050 | Msa0247510:intron | 25.0% |
| !!! | GGGTTTGACATAAATTTTTT+GGG | + | chr2_2:29902032-29902051 | Msa0247510:intron | 25.0% |
| ! | CCAAACCCATTAAATTTAAT+CGG | + | chr2_2:29902067-29902086 | Msa0247510:intron | 25.0% |
| ! | CAAACCCATTAAATTTAATC+GGG | + | chr2_2:29902068-29902087 | Msa0247510:intron | 25.0% |
| ! | TAATGATGTAAAACTTAAGG+AGG | - | chr2_2:29902144-29902163 | None:intergenic | 25.0% |
| ! | GAAGAAAATTTAGTTGAAAG+GGG | + | chr2_2:29902235-29902254 | Msa0247510:intron | 25.0% |
| ! | AAAAACAGGTAGAGTATATA+AGG | - | chr2_2:29902269-29902288 | None:intergenic | 25.0% |
| ! | ACAACAAAAAATTGCTCTAT+AGG | + | chr2_2:29902406-29902425 | Msa0247510:intron | 25.0% |
| ! | ACCTATAATAATGCCTTAAA+AGG | + | chr2_2:29902528-29902547 | Msa0247510:intron | 25.0% |
| !!! | ACCTTTTAAGGCATTATTAT+AGG | - | chr2_2:29902532-29902551 | None:intergenic | 25.0% |
| !! | ATTTTTATGATAGTAGGGTT+TGG | + | chr2_2:29902588-29902607 | Msa0247510:intron | 25.0% |
| !!! | TTTTATTTCTGGACTTTTTG+TGG | - | chr2_2:29902730-29902749 | None:intergenic | 25.0% |
| ! | AGGATATTAAACCTATAACT+TGG | - | chr2_2:29902828-29902847 | None:intergenic | 25.0% |
| ! | ATGAGACTTATTTGAATTAG+AGG | - | chr2_2:29902848-29902867 | None:intergenic | 25.0% |
| ! | TTCAAATAAGTCTCATTGAT+AGG | + | chr2_2:29902852-29902871 | Msa0247510:intron | 25.0% |
| ! | TCAAATAAGTCTCATTGATA+GGG | + | chr2_2:29902853-29902872 | Msa0247510:intron | 25.0% |
| ! | ACAAGATCTCTCATTTATAT+TGG | + | chr2_2:29902886-29902905 | Msa0247510:intron | 25.0% |
| ! | CAAGATCTCTCATTTATATT+GGG | + | chr2_2:29902887-29902906 | Msa0247510:intron | 25.0% |
| ! | ATGAGTAAATATTGCAATGT+GGG | + | chr2_2:29903005-29903024 | Msa0247510:intron | 25.0% |
| ! | ATAAATTCTACTACGGTATA+GGG | - | chr2_2:29903556-29903575 | None:intergenic | 25.0% |
| ! | TATAAATTCTACTACGGTAT+AGG | - | chr2_2:29903557-29903576 | None:intergenic | 25.0% |
| !!! | TATGATATGCTTAGCTTTTT+TGG | + | chr2_2:29903599-29903618 | Msa0247510:intron | 25.0% |
| ! | AAGAAAGTTGGATTGATAAA+TGG | - | chr2_2:29903783-29903802 | None:intergenic | 25.0% |
| ! | CAAAAGAAATGCAACTAAAT+AGG | - | chr2_2:29903852-29903871 | None:intergenic | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | + | chr2_2:29903932-29903951 | Msa0247510:CDS | 25.0% |
| ! | AGGGGAAAAAAAAACTATTT+GGG | - | chr2_2:29904152-29904171 | None:intergenic | 25.0% |
| ! | TAGGGGAAAAAAAAACTATT+TGG | - | chr2_2:29904153-29904172 | None:intergenic | 25.0% |
| ! | TCAAAAGATAAACACTCTTA+AGG | + | chr2_2:29904288-29904307 | Msa0247510:CDS | 25.0% |
| ! | ACAAATATCAGAAAACAAGA+TGG | - | chr2_2:29904502-29904521 | None:intergenic | 25.0% |
| ! | CTTTAAATTAGTAGCAATGT+TGG | - | chr2_2:29904581-29904600 | None:intergenic | 25.0% |
| !! | TAATTTAAAGTGTGATTTGG+TGG | + | chr2_2:29904591-29904610 | Msa0247510:intron | 25.0% |
| !!! | TCCTATTTTAAACTGTTTCT+TGG | - | chr2_2:29904749-29904768 | None:intergenic | 25.0% |
| ! | TTGATTAACAACTTAAAGCA+GGG | - | chr2_2:29904823-29904842 | None:intergenic | 25.0% |
| ! | ATTGATTAACAACTTAAAGC+AGG | - | chr2_2:29904824-29904843 | None:intergenic | 25.0% |
| !! | ATTTGTTAGCAGAGATATAT+AGG | - | chr2_2:29905055-29905074 | None:intergenic | 25.0% |
| ! | AATATTGATACATTGTCATG+TGG | + | chr2_2:29905072-29905091 | Msa0247510:intron | 25.0% |
| !! | TTCTTTTGCATGAAAAAAAG+TGG | + | chr2_2:29905176-29905195 | Msa0247510:intron | 25.0% |
| !! | CTAATATTTTTCCCTTTTCT+AGG | - | chr2_2:29905518-29905537 | None:intergenic | 25.0% |
| ! | AAAGTCACAATTGAATAGAA+AGG | - | chr2_2:29905817-29905836 | None:intergenic | 25.0% |
| ! | ATTAACTGAAACAAGATTAC+AGG | - | chr2_2:29906151-29906170 | None:intergenic | 25.0% |
| ! | TATCAACATATCATTGGAAT+TGG | - | chr2_2:29906257-29906276 | None:intergenic | 25.0% |
| !! | ATTTTGTTGATTGCAAGGTT+TGG | + | chr2_2:29901534-29901553 | Msa0247510:intron | 30.0% |
| ! | GGTTCAATTGGTCTATTTAA+GGG | - | chr2_2:29901585-29901604 | None:intergenic | 30.0% |
| ! | TGGTTCAATTGGTCTATTTA+AGG | - | chr2_2:29901586-29901605 | None:intergenic | 30.0% |
| TACTTCAAGTATGAATGAGT+TGG | - | chr2_2:29901757-29901776 | None:intergenic | 30.0% | |
| CATTCATACTTGAAGTAGTT+TGG | + | chr2_2:29901760-29901779 | Msa0247510:intron | 30.0% | |
| ATACTTGAAGTAGTTTGGAT+TGG | + | chr2_2:29901765-29901784 | Msa0247510:intron | 30.0% | |
| TACTTGAAGTAGTTTGGATT+GGG | + | chr2_2:29901766-29901785 | Msa0247510:intron | 30.0% | |
| !! | TAAATTTAATGGGTTTGGAC+TGG | - | chr2_2:29902065-29902084 | None:intergenic | 30.0% |
| !! | CCGATTAAATTTAATGGGTT+TGG | - | chr2_2:29902070-29902089 | None:intergenic | 30.0% |
| CTGACCCGATTAAATTTAAT+GGG | - | chr2_2:29902075-29902094 | None:intergenic | 30.0% | |
| !! | ATACTCTACCTGTTTTTCAT+TGG | + | chr2_2:29902272-29902291 | Msa0247510:intron | 30.0% |
| !!! | TGTTGTTTTTTATTCAGGGT+TGG | - | chr2_2:29902389-29902408 | None:intergenic | 30.0% |
| ACGATCTAAAAGACCTATTT+GGG | - | chr2_2:29902463-29902482 | None:intergenic | 30.0% | |
| TACGATCTAAAAGACCTATT+TGG | - | chr2_2:29902464-29902483 | None:intergenic | 30.0% | |
| ! | TAGGTCTTTTAGATCGTAAT+TGG | + | chr2_2:29902466-29902485 | Msa0247510:intron | 30.0% |
| ! | AGGTCTTTTAGATCGTAATT+GGG | + | chr2_2:29902467-29902486 | Msa0247510:intron | 30.0% |
| ! | ATAAGGGATTTCACCTTTTA+AGG | - | chr2_2:29902544-29902563 | None:intergenic | 30.0% |
| !! | TGCCTCATTTTTATGATAGT+AGG | + | chr2_2:29902582-29902601 | Msa0247510:intron | 30.0% |
| !! | GCCTCATTTTTATGATAGTA+GGG | + | chr2_2:29902583-29902602 | Msa0247510:intron | 30.0% |
| ACCCTACTATCATAAAAATG+AGG | - | chr2_2:29902587-29902606 | None:intergenic | 30.0% | |
| ATTAGGCAAAAACAAAACCA+AGG | + | chr2_2:29902785-29902804 | Msa0247510:intron | 30.0% | |
| CTATAACTTGGAATTGAAGT+TGG | - | chr2_2:29902816-29902835 | None:intergenic | 30.0% | |
| CAACTTCAATTCCAAGTTAT+AGG | + | chr2_2:29902814-29902833 | Msa0247510:intron | 30.0% | |
| GGTCTTTGATGAAAATTAAG+TGG | - | chr2_2:29902923-29902942 | None:intergenic | 30.0% | |
| GTCAAGCTTATGATAATACA+TGG | - | chr2_2:29902944-29902963 | None:intergenic | 30.0% | |
| ACTAGCACGTATAATATCAA+AGG | + | chr2_2:29902969-29902988 | Msa0247510:intron | 30.0% | |
| CACATTGCAATATTTACTCA+TGG | - | chr2_2:29903006-29903025 | None:intergenic | 30.0% | |
| CATGAGTAAATATTGCAATG+TGG | + | chr2_2:29903004-29903023 | Msa0247510:intron | 30.0% | |
| TAAAATGCAGTTCATGTGTT+TGG | - | chr2_2:29903298-29903317 | None:intergenic | 30.0% | |
| ! | TTTGTTGTAGAAAATCCATC+TGG | + | chr2_2:29903343-29903362 | Msa0247510:intron | 30.0% |
| GATGTCCATATACATAGATA+AGG | + | chr2_2:29903465-29903484 | Msa0247510:intron | 30.0% | |
| AGTGACCTTATCTATGTATA+TGG | - | chr2_2:29903473-29903492 | None:intergenic | 30.0% | |
| ! | TAGATAAGGTCACTTTAACA+TGG | + | chr2_2:29903479-29903498 | Msa0247510:intron | 30.0% |
| CTCTCAAACAAATATGTGAT+AGG | + | chr2_2:29903503-29903522 | Msa0247510:intron | 30.0% | |
| ! | ACAAGTTGAAAAACTAACAC+AGG | - | chr2_2:29903647-29903666 | None:intergenic | 30.0% |
| ATAAAAGGCTCATATATGAC+AGG | - | chr2_2:29903745-29903764 | None:intergenic | 30.0% | |
| AAAGTTGGATTGATAAATGG+TGG | - | chr2_2:29903780-29903799 | None:intergenic | 30.0% | |
| CTTAGCAACATTAAGAAAGT+TGG | - | chr2_2:29903795-29903814 | None:intergenic | 30.0% | |
| GAAATGCAACTAAATAGGTT+AGG | - | chr2_2:29903847-29903866 | None:intergenic | 30.0% | |
| ! | TTAGTTGCATTTCTTTTGAC+AGG | + | chr2_2:29903854-29903873 | Msa0247510:intron | 30.0% |
| ! | CTCAATAGAATCGTTTTCAT+TGG | - | chr2_2:29904374-29904393 | None:intergenic | 30.0% |
| CAATGAAAACGATTCTATTG+AGG | + | chr2_2:29904372-29904391 | Msa0247510:CDS | 30.0% | |
| ! | AATAGATCTGCAATTGATTC+TGG | - | chr2_2:29904649-29904668 | None:intergenic | 30.0% |
| ! | TCCTATCATAAACTGTTTCT+TGG | - | chr2_2:29904708-29904727 | None:intergenic | 30.0% |
| ! | GCCAAGAAACAGTTTAAAAT+AGG | + | chr2_2:29904745-29904764 | Msa0247510:intron | 30.0% |
| ! | CACCATAATAGTTTTTGATG+AGG | - | chr2_2:29905155-29905174 | None:intergenic | 30.0% |
| !! | TGCAAGTTTGTTGAAATTAG+GGG | - | chr2_2:29905235-29905254 | None:intergenic | 30.0% |
| !! | CTGCAAGTTTGTTGAAATTA+GGG | - | chr2_2:29905236-29905255 | None:intergenic | 30.0% |
| ! | CAATTGTATTTTTCCCAACA+AGG | - | chr2_2:29905259-29905278 | None:intergenic | 30.0% |
| AAAAACACCTCAGAAAACAA+AGG | + | chr2_2:29905650-29905669 | Msa0247510:intron | 30.0% | |
| !!! | ACTATTTCCTTTGTTTTCTG+AGG | - | chr2_2:29905660-29905679 | None:intergenic | 30.0% |
| ATTGTGACTTTCTATCCTTT+AGG | + | chr2_2:29905826-29905845 | Msa0247510:intron | 30.0% | |
| TTGTGACTTTCTATCCTTTA+GGG | + | chr2_2:29905827-29905846 | Msa0247510:intron | 30.0% | |
| CTTCTTGCAAGTAATTGATA+TGG | + | chr2_2:29905877-29905896 | Msa0247510:intron | 30.0% | |
| TTGCAAGTAATTGATATGGA+AGG | + | chr2_2:29905881-29905900 | Msa0247510:intron | 30.0% | |
| ATGGCATATGCTATATGAAT+TGG | + | chr2_2:29906002-29906021 | Msa0247510:intron | 30.0% | |
| ATCATTGTGCTAAACATTCT+AGG | + | chr2_2:29906031-29906050 | Msa0247510:intron | 30.0% | |
| AGTTTCATAGTTGTGAGAAT+GGG | + | chr2_2:29906507-29906526 | Msa0247510:CDS | 30.0% | |
| ! | GATCAACTATGGACTTTTCA+TGG | - | chr2_2:29901233-29901252 | None:intergenic | 35.0% |
| GTTATTAAATGATCTCCGTC+CGG | + | chr2_2:29901298-29901317 | Msa0247510:intron | 35.0% | |
| !! | GTCTTGTGTTTGATTTTAGC+CGG | - | chr2_2:29901320-29901339 | None:intergenic | 35.0% |
| !! | AGAGTGTCTTAGTTTTCTCA+GGG | - | chr2_2:29901474-29901493 | None:intergenic | 35.0% |
| !!! | AAGAGTGTCTTAGTTTTCTC+AGG | - | chr2_2:29901475-29901494 | None:intergenic | 35.0% |
| ! | TGACATTTGTCTGGTTCAAT+TGG | - | chr2_2:29901597-29901616 | None:intergenic | 35.0% |
| !! | ATTTAGCTCTGACATTTGTC+TGG | - | chr2_2:29901606-29901625 | None:intergenic | 35.0% |
| CTCATACTTGAATTTAGGTC+AGG | - | chr2_2:29901723-29901742 | None:intergenic | 35.0% | |
| !! | AAGTATGAATGAGTTGGTTC+GGG | - | chr2_2:29901751-29901770 | None:intergenic | 35.0% |
| !! | CAAGTATGAATGAGTTGGTT+CGG | - | chr2_2:29901752-29901771 | None:intergenic | 35.0% |
| !!! | ACAATTTTTTCGAGCAGGTT+GGG | - | chr2_2:29901828-29901847 | None:intergenic | 35.0% |
| !!! | TACAATTTTTTCGAGCAGGT+TGG | - | chr2_2:29901829-29901848 | None:intergenic | 35.0% |
| !!! | TGAGTAGGTTGTTTTGGTTT+GGG | - | chr2_2:29901992-29902011 | None:intergenic | 35.0% |
| !!! | ATGAGTAGGTTGTTTTGGTT+TGG | - | chr2_2:29901993-29902012 | None:intergenic | 35.0% |
| CCTGACCCGATTAAATTTAA+TGG | - | chr2_2:29902076-29902095 | None:intergenic | 35.0% | |
| CCATTAAATTTAATCGGGTC+AGG | + | chr2_2:29902073-29902092 | Msa0247510:intron | 35.0% | |
| AGCATTCTCCAATGAAAAAC+AGG | - | chr2_2:29902283-29902302 | None:intergenic | 35.0% | |
| GAATGCTCACTAGTAAATGA+CGG | + | chr2_2:29902296-29902315 | Msa0247510:intron | 35.0% | |
| ! | AGACCTATTTGGGATTTAGA+GGG | - | chr2_2:29902453-29902472 | None:intergenic | 35.0% |
| ! | AAGACCTATTTGGGATTTAG+AGG | - | chr2_2:29902454-29902473 | None:intergenic | 35.0% |
| ! | GGTCTTTTAGATCGTAATTG+GGG | + | chr2_2:29902468-29902487 | Msa0247510:intron | 35.0% |
| ACAACACTCGATACAATTGT+GGG | + | chr2_2:29902761-29902780 | Msa0247510:intron | 35.0% | |
| !! | AATTGAAGTTGGTGATTCCT+TGG | - | chr2_2:29902805-29902824 | None:intergenic | 35.0% |
| ACATAAAGAACGCAGAACTA+GGG | - | chr2_2:29903091-29903110 | None:intergenic | 35.0% | |
| AACATAAAGAACGCAGAACT+AGG | - | chr2_2:29903092-29903111 | None:intergenic | 35.0% | |
| TTTATCGAAGCAGATTACTG+AGG | + | chr2_2:29903177-29903196 | Msa0247510:CDS | 35.0% | |
| TACTGAGGATGGTCAAATTA+TGG | + | chr2_2:29903192-29903211 | Msa0247510:intron | 35.0% | |
| ! | CACATGAACTGCATTTTATG+TGG | + | chr2_2:29903300-29903319 | Msa0247510:intron | 35.0% |
| ! | TAGGCAGTGTTGTTAAATAG+CGG | + | chr2_2:29903522-29903541 | Msa0247510:intron | 35.0% |
| AAAGAAAAAGACTGTCGAAC+AGG | + | chr2_2:29903898-29903917 | Msa0247510:CDS | 35.0% | |
| AGGTACATACGAAAATGCTT+TGG | + | chr2_2:29903952-29903971 | Msa0247510:intron | 35.0% | |
| TATGGTGTACCATCTATATG+CGG | - | chr2_2:29904065-29904084 | None:intergenic | 35.0% | |
| !! | AACCAAAGCATTGTTGGTTA+TGG | - | chr2_2:29904083-29904102 | None:intergenic | 35.0% |
| !! | ATATGCAACCAAAGCATTGT+TGG | - | chr2_2:29904089-29904108 | None:intergenic | 35.0% |
| !! | TTTAAAGTGTGATTTGGTGG+TGG | + | chr2_2:29904594-29904613 | Msa0247510:intron | 35.0% |
| ! | TAAGAGCTAGTTAGGTTGTA+TGG | + | chr2_2:29904622-29904641 | Msa0247510:intron | 35.0% |
| ! | AAGTTTCAAGTAGGCTTCAT+GGG | - | chr2_2:29904673-29904692 | None:intergenic | 35.0% |
| ! | AAAGTTTCAAGTAGGCTTCA+TGG | - | chr2_2:29904674-29904693 | None:intergenic | 35.0% |
| ! | AGCCTACTTGAAACTTTTTG+TGG | + | chr2_2:29904677-29904696 | Msa0247510:intron | 35.0% |
| ! | CACCACAAAAAGTTTCAAGT+AGG | - | chr2_2:29904682-29904701 | None:intergenic | 35.0% |
| ! | CTACTTGAAACTTTTTGTGG+TGG | + | chr2_2:29904680-29904699 | Msa0247510:intron | 35.0% |
| GCCAAGAAACAGTTTATGAT+AGG | + | chr2_2:29904704-29904723 | Msa0247510:intron | 35.0% | |
| TACATTGTCATGTGGTGATA+AGG | + | chr2_2:29905080-29905099 | Msa0247510:intron | 35.0% | |
| ACATTGTCATGTGGTGATAA+GGG | + | chr2_2:29905081-29905100 | Msa0247510:intron | 35.0% | |
| GGCCTCATCAAAAACTATTA+TGG | + | chr2_2:29905150-29905169 | Msa0247510:intron | 35.0% | |
| ! | GTTTGTTGAAATTAGGGGAA+AGG | - | chr2_2:29905230-29905249 | None:intergenic | 35.0% |
| !! | GCTGCAAGTTTGTTGAAATT+AGG | - | chr2_2:29905237-29905256 | None:intergenic | 35.0% |
| GTGCTTATATTTAGTGGTCT+TGG | - | chr2_2:29905305-29905324 | None:intergenic | 35.0% | |
| GAGTGTGTGCTTATATTTAG+TGG | - | chr2_2:29905311-29905330 | None:intergenic | 35.0% | |
| TTACCTTCAAACCCTAGAAA+AGG | + | chr2_2:29905503-29905522 | Msa0247510:intron | 35.0% | |
| TACCTTCAAACCCTAGAAAA+GGG | + | chr2_2:29905504-29905523 | Msa0247510:intron | 35.0% | |
| !! | TAACTTGCTTAGGTAAGCAA+AGG | - | chr2_2:29905554-29905573 | None:intergenic | 35.0% |
| !! | TAACTCGCTATAACTTGCTT+AGG | - | chr2_2:29905564-29905583 | None:intergenic | 35.0% |
| TGGTTATCGTGCACTATTTA+GGG | - | chr2_2:29905587-29905606 | None:intergenic | 35.0% | |
| ATGGTTATCGTGCACTATTT+AGG | - | chr2_2:29905588-29905607 | None:intergenic | 35.0% | |
| ACAAAGGAAATAGTGAGTTG+TGG | + | chr2_2:29905666-29905685 | Msa0247510:intron | 35.0% | |
| CAAAGGAAATAGTGAGTTGT+GGG | + | chr2_2:29905667-29905686 | Msa0247510:intron | 35.0% | |
| AGCAAATGAGTTTACCCTAA+AGG | - | chr2_2:29905844-29905863 | None:intergenic | 35.0% | |
| ! | TGCGACTATATCTCTGAAAA+AGG | - | chr2_2:29905912-29905931 | None:intergenic | 35.0% |
| TACGAATAAGAAACAAGGGA+AGG | + | chr2_2:29906085-29906104 | Msa0247510:intron | 35.0% | |
| ACGAATAAGAAACAAGGGAA+GGG | + | chr2_2:29906086-29906105 | Msa0247510:intron | 35.0% | |
| ACCAGCATACAGAATATATG+TGG | + | chr2_2:29906392-29906411 | Msa0247510:intron | 35.0% | |
| ACCACATATATTCTGTATGC+TGG | - | chr2_2:29906396-29906415 | None:intergenic | 35.0% | |
| TTCATTCCAAATCCCAAAAC+GGG | - | chr2_2:29906476-29906495 | None:intergenic | 35.0% | |
| CTTCATTCCAAATCCCAAAA+CGG | - | chr2_2:29906477-29906496 | None:intergenic | 35.0% | |
| GAGTTTCATAGTTGTGAGAA+TGG | + | chr2_2:29906506-29906525 | Msa0247510:CDS | 35.0% | |
| !! | TGTGTTTGATTTTAGCCGGA+CGG | - | chr2_2:29901316-29901335 | None:intergenic | 40.0% |
| GACCAACCCAACATATTCAA+AGG | + | chr2_2:29901337-29901356 | Msa0247510:intron | 40.0% | |
| TGCCTTTGAATATGTTGGGT+TGG | - | chr2_2:29901342-29901361 | None:intergenic | 40.0% | |
| GGTCTATTTAAGGGTCTCAA+AGG | - | chr2_2:29901576-29901595 | None:intergenic | 40.0% | |
| TCATACCATTGACAGTCACT+TGG | + | chr2_2:29901630-29901649 | Msa0247510:intron | 40.0% | |
| CATACCATTGACAGTCACTT+GGG | + | chr2_2:29901631-29901650 | Msa0247510:intron | 40.0% | |
| AATACCCAAGTGACTGTCAA+TGG | - | chr2_2:29901638-29901657 | None:intergenic | 40.0% | |
| !! | TCACTTGGGTATTGATAGCT+AGG | + | chr2_2:29901645-29901664 | Msa0247510:intron | 40.0% |
| !! | CACTTGGGTATTGATAGCTA+GGG | + | chr2_2:29901646-29901665 | Msa0247510:intron | 40.0% |
| !! | ACTTGGGTATTGATAGCTAG+GGG | + | chr2_2:29901647-29901666 | Msa0247510:intron | 40.0% |
| !!! | GTTGTTTTGGTTTGGGTCAA+CGG | - | chr2_2:29901985-29902004 | None:intergenic | 40.0% |
| ! | CGACAATGAGTAGGTTGTTT+TGG | - | chr2_2:29901998-29902017 | None:intergenic | 40.0% |
| TATCCAACTCGACAATGAGT+AGG | - | chr2_2:29902007-29902026 | None:intergenic | 40.0% | |
| !! | TACTCATTGTCGAGTTGGAT+AGG | + | chr2_2:29902006-29902025 | Msa0247510:intron | 40.0% |
| !! | ATTGTCGAGTTGGATAGGTT+TGG | + | chr2_2:29902011-29902030 | Msa0247510:intron | 40.0% |
| !! | TTGTCGAGTTGGATAGGTTT+GGG | + | chr2_2:29902012-29902031 | Msa0247510:intron | 40.0% |
| ATTTAATCGGGTCAGGTAAC+AGG | + | chr2_2:29902080-29902099 | Msa0247510:intron | 40.0% | |
| !! | CCATCAATAGGGGTGTTAAT+GGG | - | chr2_2:29902121-29902140 | None:intergenic | 40.0% |
| ACTTAAGGAGGCCATCAATA+GGG | - | chr2_2:29902132-29902151 | None:intergenic | 40.0% | |
| AACTTAAGGAGGCCATCAAT+AGG | - | chr2_2:29902133-29902152 | None:intergenic | 40.0% | |
| !! | TTTATTCAGGGTTGGCTCAA+GGG | - | chr2_2:29902381-29902400 | None:intergenic | 40.0% |
| !!! | TTTTATTCAGGGTTGGCTCA+AGG | - | chr2_2:29902382-29902401 | None:intergenic | 40.0% |
| ! | GACCTATTTGGGATTTAGAG+GGG | - | chr2_2:29902452-29902471 | None:intergenic | 40.0% |
| CACAACACTCGATACAATTG+TGG | + | chr2_2:29902760-29902779 | Msa0247510:intron | 40.0% | |
| TCGATACAATTGTGGGCATT+AGG | + | chr2_2:29902768-29902787 | Msa0247510:intron | 40.0% | |
| TGTAGAAAATCCATCTGGAC+TGG | + | chr2_2:29903348-29903367 | Msa0247510:intron | 40.0% | |
| ! | GTTGCATTTCTTTTGACAGG+AGG | + | chr2_2:29903857-29903876 | Msa0247510:intron | 40.0% |
| CAAATGATCCCGCATATAGA+TGG | + | chr2_2:29904053-29904072 | Msa0247510:intron | 40.0% | |
| ATGGTGTACCATCTATATGC+GGG | - | chr2_2:29904064-29904083 | None:intergenic | 40.0% | |
| CACCATAACCAACAATGCTT+TGG | + | chr2_2:29904078-29904097 | Msa0247510:intron | 40.0% | |
| TGGAACAGTAAGAGCTAGTT+AGG | + | chr2_2:29904614-29904633 | Msa0247510:intron | 40.0% | |
| !! | AACAAACTTGCAGCCTTGTT+GGG | + | chr2_2:29905243-29905262 | Msa0247510:intron | 40.0% |
| CTTGGATTCACTCTTGAACA+GGG | - | chr2_2:29905287-29905306 | None:intergenic | 40.0% | |
| TCTTGGATTCACTCTTGAAC+AGG | - | chr2_2:29905288-29905307 | None:intergenic | 40.0% | |
| ! | GATGAGCACTGTAGTAAGTT+TGG | - | chr2_2:29905452-29905471 | None:intergenic | 40.0% |
| TTACTACAGTGCTCATCTCT+TGG | + | chr2_2:29905455-29905474 | Msa0247510:intron | 40.0% | |
| !!! | TTCCCTTTTCTAGGGTTTGA+AGG | - | chr2_2:29905509-29905528 | None:intergenic | 40.0% |
| ! | GTCTATCAGATGAGTTTGCT+AGG | + | chr2_2:29905693-29905712 | Msa0247510:intron | 40.0% |
| ! | CTTTTCCCCGTTAATTGTCA+AGG | - | chr2_2:29905746-29905765 | None:intergenic | 40.0% |
| TAACGGGGAAAAGTTAGTTG+TGG | + | chr2_2:29905753-29905772 | Msa0247510:intron | 40.0% | |
| AACGGGGAAAAGTTAGTTGT+GGG | + | chr2_2:29905754-29905773 | Msa0247510:intron | 40.0% | |
| ATATAGTCGCATATCGCTGT+AGG | + | chr2_2:29905921-29905940 | Msa0247510:intron | 40.0% | |
| ATTATCCATGTACTGCACAG+TGG | - | chr2_2:29906063-29906082 | None:intergenic | 40.0% | |
| GTGGTTCTCACAATAAGTGA+TGG | + | chr2_2:29906411-29906430 | Msa0247510:intron | 40.0% | |
| TTCCTTTATGTCTTCAGCGA+CGG | + | chr2_2:29906435-29906454 | Msa0247510:intron | 40.0% | |
| TGATTGCAAGGTTTGGACCT+TGG | + | chr2_2:29901541-29901560 | Msa0247510:intron | 45.0% | |
| CTCAAAGGCTTCTTTGACCA+AGG | - | chr2_2:29901561-29901580 | None:intergenic | 45.0% | |
| !! | CTTGGGTATTGATAGCTAGG+GGG | + | chr2_2:29901648-29901667 | Msa0247510:intron | 45.0% |
| ! | AGTAGTTTGGATTGGGCAAC+TGG | + | chr2_2:29901773-29901792 | Msa0247510:intron | 45.0% |
| CAACCTACTCATTGTCGAGT+TGG | + | chr2_2:29902001-29902020 | Msa0247510:intron | 45.0% | |
| !!! | GGGTGTTAATGGGTTGGTTT+TGG | - | chr2_2:29902111-29902130 | None:intergenic | 45.0% |
| !! | CAATAGGGGTGTTAATGGGT+TGG | - | chr2_2:29902117-29902136 | None:intergenic | 45.0% |
| CCCATTAACACCCCTATTGA+TGG | + | chr2_2:29902118-29902137 | Msa0247510:intron | 45.0% | |
| !! | GCCATCAATAGGGGTGTTAA+TGG | - | chr2_2:29902122-29902141 | None:intergenic | 45.0% |
| CTTAAGGAGGCCATCAATAG+GGG | - | chr2_2:29902131-29902150 | None:intergenic | 45.0% | |
| !! | TTATTCAGGGTTGGCTCAAG+GGG | - | chr2_2:29902380-29902399 | None:intergenic | 45.0% |
| ! | TTTGGGATTTAGAGGGGTCT+AGG | - | chr2_2:29902446-29902465 | None:intergenic | 45.0% |
| GACCCCTCTAAATCCCAAAT+AGG | + | chr2_2:29902447-29902466 | Msa0247510:intron | 45.0% | |
| CTTTATGTTAGCAGTGCAGC+AGG | + | chr2_2:29903103-29903122 | Msa0247510:intron | 45.0% | |
| TCGAAGCAGATTACTGAGGA+TGG | + | chr2_2:29903181-29903200 | Msa0247510:CDS | 45.0% | |
| TGGCTAACAGTCTTGCATCT+TGG | + | chr2_2:29903320-29903339 | Msa0247510:intron | 45.0% | |
| AAATTCTGTGCCAGTCCAGA+TGG | - | chr2_2:29903361-29903380 | None:intergenic | 45.0% | |
| !! | TCTGGACTGGCACAGAATTT+AGG | + | chr2_2:29903361-29903380 | Msa0247510:CDS | 45.0% |
| !! | CTGGACTGGCACAGAATTTA+GGG | + | chr2_2:29903362-29903381 | Msa0247510:CDS | 45.0% |
| GAATTTAGGGACAGTCGTCA+AGG | + | chr2_2:29903375-29903394 | Msa0247510:CDS | 45.0% | |
| AGTGAGCGTTTGTGTTAGGA+CGG | - | chr2_2:29904323-29904342 | None:intergenic | 45.0% | |
| TACCTTTGTGCTTTGACTGC+AGG | + | chr2_2:29905129-29905148 | Msa0247510:intron | 45.0% | |
| ! | CAACAAACTTGCAGCCTTGT+TGG | + | chr2_2:29905242-29905261 | Msa0247510:intron | 45.0% |
| CAAGCCGCCTTGACAATTAA+CGG | + | chr2_2:29905736-29905755 | Msa0247510:intron | 45.0% | |
| AAGCCGCCTTGACAATTAAC+GGG | + | chr2_2:29905737-29905756 | Msa0247510:intron | 45.0% | |
| TTCCCCGTTAATTGTCAAGG+CGG | - | chr2_2:29905743-29905762 | None:intergenic | 45.0% | |
| TTCCGTCGCTGAAGACATAA+AGG | - | chr2_2:29906440-29906459 | None:intergenic | 45.0% | |
| TTATGTCTTCAGCGACGGAA+AGG | + | chr2_2:29906440-29906459 | Msa0247510:intron | 45.0% | |
| TTCCAAATCCCAAAACGGGT+CGG | - | chr2_2:29906472-29906491 | None:intergenic | 45.0% | |
| !!! | GTTTTTATTTTTATTTTTTA+TGG | - | chr2_2:29901507-29901526 | None:intergenic | 5.0% |
| !!! | TAATTTTTATAACAATAAAT+TGG | + | chr2_2:29902162-29902181 | Msa0247510:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTGAAT+CGG | + | chr2_2:29903975-29903994 | Msa0247510:intron | 5.0% |
| !!! | AATGTATAATTTTTTTTATT+TGG | + | chr2_2:29904779-29904798 | Msa0247510:intron | 5.0% |
| !!! | ATGTATAATTTTTTTTATTT+GGG | + | chr2_2:29904780-29904799 | Msa0247510:intron | 5.0% |
| !!! | TTTTTTACTTTTATTTTTTA+AGG | - | chr2_2:29905424-29905443 | None:intergenic | 5.0% |
| ! | TTGATAGCTAGGGGGTTCAC+AGG | + | chr2_2:29901656-29901675 | Msa0247510:intron | 50.0% |
| ! | TTCGAGCAGGTTGGGTTTGT+TGG | - | chr2_2:29901820-29901839 | None:intergenic | 50.0% |
| !! | TATTCAGGGTTGGCTCAAGG+GGG | - | chr2_2:29902379-29902398 | None:intergenic | 50.0% |
| TATGTTAGCAGTGCAGCAGG+TGG | + | chr2_2:29903106-29903125 | Msa0247510:intron | 50.0% | |
| GGAAGCAAGAGATCGACAGA+TGG | + | chr2_2:29903127-29903146 | Msa0247510:CDS | 50.0% | |
| TCCATACCTTGCGTCTTGCA+GGG | - | chr2_2:29904021-29904040 | None:intergenic | 50.0% | |
| GCTCAGTGAGCGTTTGTGTT+AGG | - | chr2_2:29904327-29904346 | None:intergenic | 50.0% | |
| AGCCGCCTTGACAATTAACG+GGG | + | chr2_2:29905738-29905757 | Msa0247510:intron | 50.0% | |
| CAACACCACTGTGCAGTACA+TGG | + | chr2_2:29906055-29906074 | Msa0247510:intron | 50.0% | |
| ! | AGGTTTTCACCGACCCGTTT+TGG | + | chr2_2:29906460-29906479 | Msa0247510:CDS | 50.0% |
| ! | GGTTTTCACCGACCCGTTTT+GGG | + | chr2_2:29906461-29906480 | Msa0247510:CDS | 50.0% |
| GTGAGAATGGGATTTCGTCG+CGG | + | chr2_2:29906519-29906538 | Msa0247510:CDS | 50.0% | |
| TAGCTAGGGGGTTCACAGGT+TGG | + | chr2_2:29901660-29901679 | Msa0247510:intron | 55.0% | |
| GGGATTTAGAGGGGTCTAGG+AGG | - | chr2_2:29902443-29902462 | None:intergenic | 55.0% | |
| TACCTTGCGTCTTGCAGGGA+CGG | - | chr2_2:29904017-29904036 | None:intergenic | 55.0% | |
| TCCCTGCAAGACGCAAGGTA+TGG | + | chr2_2:29904017-29904036 | Msa0247510:intron | 55.0% | |
| GTCCATACCTTGCGTCTTGC+AGG | - | chr2_2:29904022-29904041 | None:intergenic | 55.0% | |
| GGCCTGCAGTCAAAGCACAA+AGG | - | chr2_2:29905134-29905153 | None:intergenic | 55.0% | |
| !!! | CACCGACCCGTTTTGGGATT+TGG | + | chr2_2:29906467-29906486 | Msa0247510:CDS | 55.0% |
| CGCCGTCCCTGCAAGACGCA+AGG | + | chr2_2:29904012-29904031 | Msa0247510:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 29901207 | 29906565 | 29901207 | ID=Msa0247510;Name=Msa0247510 |
| chr2_2 | mRNA | 29901207 | 29906565 | 29901207 | ID=Msa0247510-mRNA-1;Parent=Msa0247510;Name=Msa0247510-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0|0.66|1|1|6|0|178 |
| chr2_2 | exon | 29901207 | 29901268 | 29901207 | ID=Msa0247510-mRNA-1:exon:10583;Parent=Msa0247510-mRNA-1 |
| chr2_2 | exon | 29903117 | 29903202 | 29903117 | ID=Msa0247510-mRNA-1:exon:10584;Parent=Msa0247510-mRNA-1 |
| chr2_2 | exon | 29903353 | 29903423 | 29903353 | ID=Msa0247510-mRNA-1:exon:10585;Parent=Msa0247510-mRNA-1 |
| chr2_2 | exon | 29903876 | 29903953 | 29903876 | ID=Msa0247510-mRNA-1:exon:10586;Parent=Msa0247510-mRNA-1 |
| chr2_2 | exon | 29904268 | 29904393 | 29904268 | ID=Msa0247510-mRNA-1:exon:10587;Parent=Msa0247510-mRNA-1 |
| chr2_2 | exon | 29906452 | 29906565 | 29906452 | ID=Msa0247510-mRNA-1:exon:10588;Parent=Msa0247510-mRNA-1 |
| chr2_2 | CDS | 29901207 | 29901268 | 29901207 | ID=Msa0247510-mRNA-1:cds;Parent=Msa0247510-mRNA-1 |
| chr2_2 | CDS | 29903117 | 29903202 | 29903117 | ID=Msa0247510-mRNA-1:cds;Parent=Msa0247510-mRNA-1 |
| chr2_2 | CDS | 29903353 | 29903423 | 29903353 | ID=Msa0247510-mRNA-1:cds;Parent=Msa0247510-mRNA-1 |
| chr2_2 | CDS | 29903876 | 29903953 | 29903876 | ID=Msa0247510-mRNA-1:cds;Parent=Msa0247510-mRNA-1 |
| chr2_2 | CDS | 29904268 | 29904393 | 29904268 | ID=Msa0247510-mRNA-1:cds;Parent=Msa0247510-mRNA-1 |
| chr2_2 | CDS | 29906452 | 29906565 | 29906452 | ID=Msa0247510-mRNA-1:cds;Parent=Msa0247510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
