AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0247760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0247760 MtrunA17_Chr2g0303101 95.569 993 44 0 34 1026 11 1003 0.0 1882
Msa0247760 MtrunA17_Chr8g0380981 60.697 1033 337 15 57 1024 25 1053 0.0 1181
Msa0247760 MtrunA17_Chr1g0189211 58.520 581 227 6 50 621 125 700 0.0 692
Msa0247760 MtrunA17_Chr1g0189211 37.759 241 138 3 785 1024 998 1227 1.54e-38 156
Msa0247760 MtrunA17_Chr7g0261401 45.217 575 291 8 57 613 99 667 1.36e-157 487
Msa0247760 MtrunA17_Chr5g0397501 40.749 427 205 8 177 591 288 678 1.64e-86 305
Msa0247760 MtrunA17_Chr5g0397501 55.405 74 29 2 70 143 23 92 4.10e-14 77.4
Msa0247760 MtrunA17_Chr5g0410721 34.975 406 179 10 72 463 86 420 1.45e-58 217
Msa0247760 MtrunA17_Chr3g0116441 33.827 405 195 10 75 468 18 360 5.68e-55 209
Msa0247760 MtrunA17_Chr1g0164731 29.022 603 323 17 71 654 41 557 5.48e-54 199
Msa0247760 MtrunA17_Chr1g0164761 31.450 407 186 11 71 468 4 326 4.77e-47 177
Msa0247760 MtrunA17_Chr1g0199511 39.574 235 138 3 287 518 295 528 1.08e-42 170
Msa0247760 MtrunA17_Chr7g0214951 40.870 115 43 4 317 423 104 201 1.20e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0247760 AT1G30810.3 63.880 598 203 6 19 612 4 592 0.0 740
Msa0247760 AT1G30810.3 53.631 179 73 4 789 965 648 818 5.00e-51 194
Msa0247760 AT1G30810.2 63.880 598 203 6 19 612 4 592 0.0 740
Msa0247760 AT1G30810.2 53.631 179 73 4 789 965 648 818 5.00e-51 194
Msa0247760 AT1G30810.1 63.880 598 203 6 19 612 4 592 0.0 740
Msa0247760 AT1G30810.1 53.631 179 73 4 789 965 648 818 5.00e-51 194
Msa0247760 AT4G20400.1 61.121 571 203 5 44 608 31 588 0.0 714
Msa0247760 AT4G20400.1 40.000 230 109 4 802 1023 743 951 2.19e-43 171
Msa0247760 AT2G34880.1 58.059 577 217 8 39 608 25 583 0.0 691
Msa0247760 AT2G34880.1 47.179 195 95 3 774 966 618 806 3.41e-46 179
Msa0247760 AT4G20400.2 61.278 532 193 4 83 608 7 531 0.0 662
Msa0247760 AT4G20400.2 40.088 227 107 4 805 1023 689 894 2.79e-43 171
Msa0247760 AT1G08620.2 56.552 580 243 3 56 628 127 704 0.0 653
Msa0247760 AT1G08620.2 38.991 218 131 2 785 1002 974 1189 2.29e-39 159
Msa0247760 AT1G08620.3 56.552 580 243 3 56 628 141 718 0.0 653
Msa0247760 AT1G08620.3 38.991 218 131 2 785 1002 988 1203 2.33e-39 159
Msa0247760 AT1G08620.4 56.552 580 243 3 56 628 127 704 0.0 653
Msa0247760 AT1G08620.4 38.991 218 131 2 785 1002 974 1189 2.29e-39 159
Msa0247760 AT1G08620.1 56.552 580 243 3 56 628 127 704 0.0 653
Msa0247760 AT1G08620.1 38.991 218 131 2 785 1002 974 1189 2.29e-39 159
Msa0247760 AT2G38950.1 40.097 621 318 11 49 651 80 664 2.57e-137 430
Msa0247760 AT1G63490.1 40.566 424 207 7 183 596 38 426 1.06e-90 315
Msa0247760 AT1G63490.2 40.566 424 207 7 183 596 291 679 1.40e-89 315
Msa0247760 AT1G63490.2 52.174 69 29 2 75 143 31 95 8.13e-12 70.5
Msa0247760 AT1G63490.4 40.566 424 207 7 183 596 291 679 1.46e-89 315
Msa0247760 AT1G63490.4 52.174 69 29 2 75 143 31 95 8.20e-12 70.5
Msa0247760 AT5G46910.2 33.855 511 236 19 72 565 100 525 1.36e-61 223
Msa0247760 AT5G46910.1 33.855 511 236 19 72 565 100 525 3.86e-61 224
Msa0247760 AT3G48430.1 31.648 455 263 11 75 518 20 437 8.54e-46 180
Msa0247760 AT5G04240.1 38.723 235 140 3 287 518 263 496 9.93e-41 164
Msa0247760 AT1G63490.3 36.555 238 128 4 364 596 1 220 2.32e-37 152

Find 225 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGATCAGTATGCACTTTC+TGG 0.098787 2_2:-30396722 Msa0247760:CDS
GCAATATGCTAGCCACTTTA+AGG 0.112299 2_2:-30397058 Msa0247760:CDS
CGGAGGGCTCCCTTCGGTTT+TGG 0.158102 2_2:+30396977 None:intergenic
AACAGGTGCTTCATCAATTA+TGG 0.174076 2_2:+30397551 None:intergenic
AGTTCTTACCAAGGCATTTA+AGG 0.186892 2_2:-30395674 Msa0247760:intron
AATTTAACTGAAGAAATTTC+TGG 0.191312 2_2:-30393263 Msa0247760:three_prime_UTR
GACTTGGAAACTGGAGTATT+TGG 0.209261 2_2:-30396785 Msa0247760:CDS
GTGAAGCCTAGATGAAATTT+TGG 0.255816 2_2:-30393240 Msa0247760:three_prime_UTR
TTCTGTCAAGCCTATAAGTT+TGG 0.258215 2_2:-30394669 Msa0247760:CDS
CGCAATGAGCTTAGCTCTTC+GGG 0.259835 2_2:+30393458 None:intergenic
TGCAAAATGCATCTGTAATT+AGG 0.270016 2_2:+30393194 None:intergenic
TTCTTAAGGACAAAGATATC+TGG 0.272205 2_2:-30397305 Msa0247760:CDS
ACAACAGATCCCAAACTTAT+AGG 0.275338 2_2:+30394659 None:intergenic
CCCTCATCTTTAAGAATTGA+TGG 0.280365 2_2:+30396006 None:intergenic
GTAATTGATGCTGGACTTCT+AGG 0.284250 2_2:-30394426 Msa0247760:CDS
CCCTTTACCGTCCATTGTTC+AGG 0.287730 2_2:-30393956 Msa0247760:intron
TCTCCTACATGTTCCTGATT+TGG 0.290265 2_2:+30397176 None:intergenic
TTCACTTGCTCTTGAGTTAT+GGG 0.291488 2_2:-30395248 Msa0247760:CDS
ACCAGATCATTGAGTAGATT+TGG 0.300651 2_2:+30396168 None:intergenic
TCTTCGGCACAAACCTAAAA+AGG 0.310311 2_2:-30397884 Msa0247760:CDS
TGAAAGTCTTAGAAGTAAAA+AGG 0.310711 2_2:-30397842 Msa0247760:intron
TACTTTCATTCGGCGCGCTA+AGG 0.318250 2_2:+30395056 None:intergenic
GGTTCCACCTTGCCTTCTTA+AGG 0.322457 2_2:-30397319 Msa0247760:CDS
CACTTTAAGGAATGCTACTT+TGG 0.328409 2_2:-30397045 Msa0247760:CDS
AAAGCAGAAGCATGGCTTCC+AGG 0.340144 2_2:+30396237 None:intergenic
GTGCTGAACAGTGCGATATA+CGG 0.343791 2_2:+30395978 None:intergenic
ATTCAGAAAGCTTTGTAGAT+AGG 0.345386 2_2:-30393368 Msa0247760:exon
CAGTTATCGATGACACTTCC+TGG 0.347721 2_2:+30393611 None:intergenic
TGGTATTAATTTGACTGATC+AGG 0.356809 2_2:-30393549 Msa0247760:CDS
TTAAGACAAGAATATTTATC+AGG 0.357562 2_2:+30395373 None:intergenic
CTTGCAGAGCTAACTCTTCA+TGG 0.358880 2_2:-30395748 Msa0247760:CDS
CACAATTCTTGTACATTTGA+TGG 0.361785 2_2:-30394830 Msa0247760:CDS
ATTCACTTGCTCTTGAGTTA+TGG 0.365297 2_2:-30395249 Msa0247760:CDS
GGTACTTCCTCGAACAAATC+AGG 0.367457 2_2:+30396189 None:intergenic
ACCACTCTGGGTTCAATTGT+GGG 0.368663 2_2:-30395921 Msa0247760:CDS
GGATCGTCCCTCCAGCTTGT+TGG 0.373348 2_2:-30397341 Msa0247760:CDS
CTTATATTGTAGGTGTACTA+TGG 0.374880 2_2:-30396812 Msa0247760:intron
GAATTTGCCTTTCAAGGTTA+AGG 0.376693 2_2:-30393146 Msa0247760:three_prime_UTR
GAGCTTCTGAAAAGCATTAA+CGG 0.382203 2_2:-30393997 Msa0247760:CDS
GCGCAATGAGCTTAGCTCTT+CGG 0.382376 2_2:+30393457 None:intergenic
GTAAATCAATTTGCTGAATA+CGG 0.383823 2_2:+30397262 None:intergenic
TATGGAGCGGACTTGGAAAC+TGG 0.386530 2_2:-30396794 Msa0247760:CDS
GATCGTCCCTCCAGCTTGTT+GGG 0.396136 2_2:-30397340 Msa0247760:CDS
AGCCATGCTTCTGCTTTAGA+AGG 0.396956 2_2:-30396231 Msa0247760:CDS
TACCACTCTGGGTTCAATTG+TGG 0.397229 2_2:-30395922 Msa0247760:CDS
ATTCCAAAACAAAGTACAAA+AGG 0.408341 2_2:+30393165 None:intergenic
TTCAGGGAGCTGTTGGCACT+TGG 0.409870 2_2:+30400143 None:intergenic
TGTAAAGCTCAACGGCATTT+AGG 0.410866 2_2:+30395845 None:intergenic
CTACTGAATCACCCTTGTTA+TGG 0.412634 2_2:+30394972 None:intergenic
TTTGTTCTGCTCATGCGAAA+TGG 0.417499 2_2:-30395341 Msa0247760:CDS
AAACTGGTTGTGCGGGAACC+AGG 0.420135 2_2:-30395138 Msa0247760:CDS
ATTTAACTGAAGAAATTTCT+GGG 0.423645 2_2:-30393262 Msa0247760:three_prime_UTR
CCTGAACAATGGACGGTAAA+GGG 0.427142 2_2:+30393956 None:intergenic
TATCGCACTGTTCAGCACTC+TGG 0.427845 2_2:-30395973 Msa0247760:CDS
ACATAGCTACAGATTCTTGT+TGG 0.428494 2_2:+30394456 None:intergenic
GGTGTACTATGGAGCGGACT+TGG 0.428752 2_2:-30396801 Msa0247760:CDS
TCACTATCTATACTTTCATT+CGG 0.430490 2_2:+30395046 None:intergenic
TGTTGCAGATATCAGCTAGA+TGG 0.432281 2_2:-30397596 Msa0247760:intron
AGGAAATTGAAGGTGAATAC+TGG 0.438638 2_2:-30396951 Msa0247760:CDS
TCTGTCAAGCCTATAAGTTT+GGG 0.440166 2_2:-30394668 Msa0247760:CDS
ATCGCACTGTTCAGCACTCT+GGG 0.442116 2_2:-30395972 Msa0247760:CDS
CATGCAAACCTCACTGGCCT+CGG 0.445628 2_2:+30395198 None:intergenic
ACTTTAAGGAATGCTACTTT+GGG 0.447518 2_2:-30397044 Msa0247760:CDS
CGTAGAAGGAACTCCAAATC+AGG 0.448607 2_2:-30397189 Msa0247760:CDS
ATCCATACCTAAGGGTTATC+CGG 0.453266 2_2:-30396741 Msa0247760:CDS
TGCAATAAATGATAAAATGC+AGG 0.455377 2_2:-30393035 Msa0247760:three_prime_UTR
GATGAAATCAATACTACAAA+AGG 0.455907 2_2:-30393486 Msa0247760:CDS
AGTTTGGGATCTGTTGTTCA+TGG 0.456198 2_2:-30394653 Msa0247760:CDS
ACCAAATCTACTCAATGATC+TGG 0.458628 2_2:-30396169 Msa0247760:intron
AATCATTACCTTAAATGCCT+TGG 0.459780 2_2:+30395666 None:intergenic
ACTTTGGTGACTCAAAGATA+TGG 0.460598 2_2:-30396269 Msa0247760:CDS
CCTCCTCGGAGGGCTCCCTT+CGG 0.462526 2_2:+30396971 None:intergenic
GAGAAATACGGATTTCAAGC+AGG 0.463346 2_2:-30397108 Msa0247760:CDS
TTCACCTTCAATTTCCTCCT+CGG 0.463503 2_2:+30396957 None:intergenic
TTTATTCATGCAAACCTCAC+TGG 0.467027 2_2:+30395192 None:intergenic
TAAGGCATCATCCATACCTA+AGG 0.467936 2_2:-30396750 Msa0247760:CDS
GAAGGAAGCGAAAACGTAGA+AGG 0.471595 2_2:-30397203 Msa0247760:CDS
GTCATCAGTGTGCAGAGTAT+TGG 0.471615 2_2:-30393658 Msa0247760:CDS
CAAAGATATACTCGCATTCG+TGG 0.472244 2_2:+30394727 None:intergenic
ACTTGAGGTGCATCTGCAAA+TGG 0.473346 2_2:-30394801 Msa0247760:CDS
TCGCTTAATTATCTACACTT+TGG 0.473473 2_2:-30396285 Msa0247760:CDS
GTTTCTGAAGTAATTGATGC+TGG 0.475315 2_2:-30394435 Msa0247760:CDS
CTGACAGGCAAGGATAAAGA+TGG 0.478929 2_2:-30395533 Msa0247760:intron
CAAAGTAGCATTCCTTAAAG+TGG 0.482363 2_2:+30397046 None:intergenic
ATTAGCTTCAGAAGCTGACT+TGG 0.482425 2_2:+30397149 None:intergenic
ACAGGTGCTTCATCAATTAT+GGG 0.484369 2_2:+30397552 None:intergenic
AAATTGCTTGAAGCACTAGA+AGG 0.484561 2_2:-30395274 Msa0247760:CDS
CAAGTACCAAAATTTCATCT+AGG 0.484948 2_2:+30393234 None:intergenic
AGATATCTTTGTCCTTAAGA+AGG 0.486084 2_2:+30397307 None:intergenic
TTGAAAGATGCAAATGAAGA+TGG 0.489132 2_2:-30397021 Msa0247760:CDS
ATACTCTGCACACTGATGAC+TGG 0.492600 2_2:+30393661 None:intergenic
TTTGAAGGAAGTGACATCTC+AGG 0.493396 2_2:-30396653 Msa0247760:CDS
GACAAGGGTCATGAAGAAAC+TGG 0.493740 2_2:-30395154 Msa0247760:CDS
CAGGCGAAAGACAACATAGA+AGG 0.494236 2_2:-30393530 Msa0247760:CDS
CAGAAGTTTCATCATGCTCT+AGG 0.495798 2_2:-30394859 Msa0247760:CDS
ATGACACTTCCTGGAGATGT+AGG 0.496695 2_2:+30393620 None:intergenic
TGCTGAACAGTGCGATATAC+GGG 0.497948 2_2:+30395979 None:intergenic
ATCTCAATTCTTTCCGACGT+TGG 0.499310 2_2:-30393334 Msa0247760:three_prime_UTR
AGAAGCTACTGTGGGAAAGA+TGG 0.500316 2_2:-30395697 Msa0247760:CDS
CCTTCAATTTCCTCCTCGGA+GGG 0.502244 2_2:+30396961 None:intergenic
GCTAAAGCCTTAACCTTGAA+AGG 0.502839 2_2:+30393139 None:intergenic
GAAACTGGAGTATTTGGAAG+TGG 0.503820 2_2:-30396779 Msa0247760:CDS
TAAATCAATTTGCTGAATAC+GGG 0.504028 2_2:+30397263 None:intergenic
ACCTGAACAATGGACGGTAA+AGG 0.506844 2_2:+30393955 None:intergenic
TCTTAAGGACAAAGATATCT+GGG 0.507226 2_2:-30397304 Msa0247760:CDS
ACTTTCATTCGGCGCGCTAA+GGG 0.509835 2_2:+30395057 None:intergenic
AAAGGTTTCCCTACATCTCC+AGG 0.510314 2_2:-30393629 Msa0247760:CDS
GCACTTGCCTGATTTGTTCG+AGG 0.511183 2_2:-30396196 Msa0247760:CDS
ATGACTATTTGACTTATCCC+TGG 0.512277 2_2:+30395120 None:intergenic
GTAGATAATTAAGCGAATAG+AGG 0.512964 2_2:+30396292 None:intergenic
CTGTTGTTCATGGGAAGCTA+TGG 0.515810 2_2:-30394643 Msa0247760:CDS
TTCAGCGACTTAAAATGAGT+TGG 0.516196 2_2:+30395487 None:intergenic
ATCAGTATGCACTTTCTGGT+TGG 0.522030 2_2:-30396718 Msa0247760:CDS
ACTGGGATCTTGAGCTTCGA+TGG 0.522302 2_2:+30393679 None:intergenic
AAACCTCAGCAGATAAGTGT+TGG 0.523110 2_2:-30394095 Msa0247760:CDS
CCAGAAAGTGCATACTGATC+CGG 0.524034 2_2:+30396722 None:intergenic
TCTGAAGCTGATGAGAAATA+CGG 0.525343 2_2:-30397120 Msa0247760:CDS
AACCTCAGCAGATAAGTGTT+GGG 0.527827 2_2:-30394094 Msa0247760:CDS
CAACAGAAGATGAAGGTGAT+AGG 0.529116 2_2:+30394888 None:intergenic
AAGCATGCAATATATCCAAA+AGG 0.529982 2_2:-30394614 Msa0247760:intron
AATAACTTCCCGCGACTACC+AGG 0.532194 2_2:-30396689 Msa0247760:CDS
AAGATATGGTATGGAGTACC+TGG 0.534279 2_2:-30396255 Msa0247760:CDS
GTTGCAGATATCAGCTAGAT+GGG 0.534301 2_2:-30397595 Msa0247760:intron
ATGTCCAAGTGTCACTTTCA+CGG 0.535146 2_2:-30394118 Msa0247760:CDS
TACTCTGCACACTGATGACT+GGG 0.536048 2_2:+30393662 None:intergenic
TTCCAAAACAAAGTACAAAA+GGG 0.537388 2_2:+30393166 None:intergenic
ATCCGGATAACCCTTAGGTA+TGG 0.541772 2_2:+30396739 None:intergenic
GGTGACTCAAAGATATGGTA+TGG 0.542015 2_2:-30396264 Msa0247760:CDS
ACCTTCAATTTCCTCCTCGG+AGG 0.543087 2_2:+30396960 None:intergenic
TACATTACCTGAACAATGGA+CGG 0.543477 2_2:+30393949 None:intergenic
CATGAAGAAACTGGTTGTGC+GGG 0.545026 2_2:-30395145 Msa0247760:CDS
GTTTGGGATCTGTTGTTCAT+GGG 0.546196 2_2:-30394652 Msa0247760:CDS
GACTTGTATCTATCTGCTGT+CGG 0.547301 2_2:-30395409 Msa0247760:CDS
CAAGGTGGAACCCAACAAGC+TGG 0.548195 2_2:+30397330 None:intergenic
TACTGATCCGGATAACCCTT+AGG 0.548758 2_2:+30396734 None:intergenic
ATCAATTTGCTGAATACGGG+TGG 0.552299 2_2:+30397266 None:intergenic
TCCATCAATTCTTAAAGATG+AGG 0.553059 2_2:-30396007 Msa0247760:CDS
CCCTCCGAGGAGGAAATTGA+AGG 0.553304 2_2:-30396961 Msa0247760:CDS
CTAAGACTTTCAGGAGACTC+AGG 0.555487 2_2:+30397853 None:intergenic
ATCACAGAGCAAAGGAGTCT+AGG 0.556463 2_2:-30394042 Msa0247760:CDS
CCATGCGTTAACCAATCGAC+AGG 0.557899 2_2:+30395868 None:intergenic
TAAAATGTTTCAGGTTACAA+TGG 0.561074 2_2:-30394145 Msa0247760:intron
CTGAACCTTACGGCATATGT+AGG 0.561925 2_2:-30397362 Msa0247760:CDS
ATGGGCCGACATGCTTCAGA+TGG 0.562965 2_2:+30397570 None:intergenic
TGACACTTCCTGGAGATGTA+GGG 0.563083 2_2:+30393621 None:intergenic
ATATGCCGTAAGGTTCAGCT+AGG 0.563102 2_2:+30397367 None:intergenic
CTTCTTCTAACAGCATGTTG+AGG 0.565189 2_2:-30396322 Msa0247760:intron
CATGAAGAGTTAGCTCTGCA+AGG 0.567369 2_2:+30395749 None:intergenic
GCAATAAATGATAAAATGCA+GGG 0.567915 2_2:-30393034 Msa0247760:three_prime_UTR
TAGAGTGCAAATATGGCGAA+TGG 0.568375 2_2:-30400192 None:intergenic
CAGAATGATACCTTGAAAAG+AGG 0.569627 2_2:+30394402 None:intergenic
AATTCTTGTACATTTGATGG+TGG 0.570192 2_2:-30394827 Msa0247760:CDS
ACAAGAGGTGGATGGAGACA+AGG 0.570762 2_2:-30395170 Msa0247760:CDS
TGTTTACATTACCTGAACAA+TGG 0.571970 2_2:+30393945 None:intergenic
TGAATGTTGCTCCTGTCGAT+TGG 0.573575 2_2:-30395879 Msa0247760:CDS
CTTCGGAATGGTTTCTGCCG+AGG 0.574133 2_2:-30395215 Msa0247760:CDS
TTCCCAACACTTATCTGCTG+AGG 0.577377 2_2:+30394092 None:intergenic
AACTGGTTGTGCGGGAACCA+GGG 0.577770 2_2:-30395137 Msa0247760:CDS
CACCTTCTAAAGCAGAAGCA+TGG 0.577974 2_2:+30396229 None:intergenic
GTACAGAACCTGGTAGTCGC+GGG 0.577977 2_2:+30396681 None:intergenic
CCATCAATTCTTAAAGATGA+GGG 0.579325 2_2:-30396006 Msa0247760:CDS
AATACCTCAACTTCATCCGT+TGG 0.582292 2_2:+30396913 None:intergenic
GTCTTCACAACAGAAGATGA+AGG 0.582987 2_2:+30394881 None:intergenic
CTAGTTCCATGGCTGTATGT+TGG 0.583650 2_2:-30396626 Msa0247760:CDS
GATAGTCATAGACAAAGATA+AGG 0.583705 2_2:-30395011 Msa0247760:CDS
TTGCATGAATAAACAAGAGG+TGG 0.585885 2_2:-30395182 Msa0247760:CDS
AATGTTTCAGGTTACAATGG+AGG 0.588047 2_2:-30394142 Msa0247760:intron
TCTTTGTCCTTAAGAAGGCA+AGG 0.591332 2_2:+30397312 None:intergenic
TCGGCGCGCTAAGGGTTACA+AGG 0.594676 2_2:+30395065 None:intergenic
TCTCAGGAGTACTAGTTCCA+TGG 0.597637 2_2:-30396637 Msa0247760:CDS
AGAGCTAACTCTTCATGGAA+AGG 0.598601 2_2:-30395743 Msa0247760:CDS
ATAGTAACCTCCAAAACCGA+AGG 0.600438 2_2:-30396987 Msa0247760:CDS
TTGAAATGGAGAAGCTACTG+TGG 0.606319 2_2:-30395706 Msa0247760:CDS
CCTGTCGATTGGTTAACGCA+TGG 0.607026 2_2:-30395868 Msa0247760:CDS
TCATGAAGAAACTGGTTGTG+CGG 0.608614 2_2:-30395146 Msa0247760:CDS
TATGCCGTAAGGTTCAGCTA+GGG 0.610752 2_2:+30397368 None:intergenic
CAAGAGGTGGATGGAGACAA+GGG 0.610819 2_2:-30395169 Msa0247760:CDS
GGTTTCTGCCGAGGCCAGTG+AGG 0.611148 2_2:-30395206 Msa0247760:CDS
ATGAAGAGTTAGCTCTGCAA+GGG 0.613991 2_2:+30395750 None:intergenic
ATGAATAAACAAGAGGTGGA+TGG 0.615332 2_2:-30395178 Msa0247760:CDS
GTTTCCGTGAAAGTGACACT+TGG 0.616503 2_2:+30394114 None:intergenic
GCAGCCAACGGATGAAGTTG+AGG 0.619008 2_2:-30396917 Msa0247760:intron
TATTGCAGATAGCCATAACA+AGG 0.619186 2_2:-30394984 Msa0247760:CDS
AGAAATACGGATTTCAAGCA+GGG 0.620076 2_2:-30397107 Msa0247760:CDS
AGTACAGAACCTGGTAGTCG+CGG 0.621060 2_2:+30396680 None:intergenic
AAAGTCTTTAAACGTGAAGT+CGG 0.621637 2_2:+30397083 None:intergenic
TGAAATGGAGAAGCTACTGT+GGG 0.625781 2_2:-30395705 Msa0247760:CDS
TGATGCTAAAGAAATTAACT+CGG 0.626787 2_2:+30394484 None:intergenic
ATTAGGTCAATGATGATCGA+GGG 0.628372 2_2:+30393211 None:intergenic
CACATGCCAACATACAGCCA+TGG 0.631048 2_2:+30396620 None:intergenic
AAGGCATCATCCATACCTAA+GGG 0.631276 2_2:-30396749 Msa0247760:CDS
CCGAAGGGAGCCCTCCGAGG+AGG 0.631741 2_2:-30396971 Msa0247760:CDS
AATTAGGTCAATGATGATCG+AGG 0.632605 2_2:+30393210 None:intergenic
GCGGATAGTTGAGCAGCCAA+CGG 0.632994 2_2:-30396929 Msa0247760:CDS
GGATAAAGATGGAAGAAGAG+AGG 0.633004 2_2:-30395522 Msa0247760:CDS
TAACAAGGGTGATTCAGTAG+AGG 0.633767 2_2:-30394969 Msa0247760:CDS
TCAAAACTTAGTACAGAACC+TGG 0.635235 2_2:+30396671 None:intergenic
TTGTAAACTGTAAAGCTCAA+CGG 0.636243 2_2:+30395837 None:intergenic
ACTCCAAATCAGGAACATGT+AGG 0.644682 2_2:-30397179 Msa0247760:CDS
AAACCGAAGGGAGCCCTCCG+AGG 0.649446 2_2:-30396974 Msa0247760:CDS
ACGATCCTACATATGCCGTA+AGG 0.650277 2_2:+30397357 None:intergenic
GAATGGATCGACCGCCAGCA+CGG 0.651513 2_2:-30400175 Msa0247760:CDS
ATTGTAGGTGTACTATGGAG+CGG 0.652824 2_2:-30396807 Msa0247760:intron
GTGGAACCCAACAAGCTGGA+GGG 0.653359 2_2:+30397334 None:intergenic
TGCCGTAAGGTTCAGCTAGG+GGG 0.653437 2_2:+30397370 None:intergenic
GGGATCCATCTGAAGCATGT+CGG 0.653861 2_2:-30397575 Msa0247760:CDS
GGTGGAACCCAACAAGCTGG+AGG 0.654238 2_2:+30397333 None:intergenic
TAGGGCTACTTGAACAACAT+AGG 0.657747 2_2:+30393582 None:intergenic
CATGTGACAATGATGTCTTA+CGG 0.661845 2_2:+30395812 None:intergenic
ATTTGATGGTGGAAAACTTG+AGG 0.662789 2_2:-30394816 Msa0247760:CDS
AGTCATAGACAAAGATAAGG+CGG 0.664329 2_2:-30395008 Msa0247760:CDS
ATGCCGTAAGGTTCAGCTAG+GGG 0.666477 2_2:+30397369 None:intergenic
GTGACAAAATCACAGAGCAA+AGG 0.668780 2_2:-30394050 Msa0247760:CDS
TAGTAACCTCCAAAACCGAA+GGG 0.678632 2_2:-30396986 Msa0247760:CDS
AAATTGAAGGTGAATACTGG+CGG 0.682225 2_2:-30396948 Msa0247760:CDS
GCAGAGTATTGGAATCACAA+AGG 0.682618 2_2:-30393647 Msa0247760:CDS
TTGTCCTTAAGAAGGCAAGG+TGG 0.697465 2_2:+30397315 None:intergenic
TTAAAATGACTATCCAACGT+CGG 0.698267 2_2:+30393321 None:intergenic
GGTTTGCATGAATAAACAAG+AGG 0.708956 2_2:-30395185 Msa0247760:CDS
ACCCACAATTGAACCCAGAG+TGG 0.709442 2_2:+30395920 None:intergenic
TCGCACTGTTCAGCACTCTG+GGG 0.722408 2_2:-30395971 Msa0247760:CDS
AAATGCAGGGAAACTACACA+CGG 0.725422 2_2:-30393021 Msa0247760:three_prime_UTR
CTGACGCACAATGTTCTGAG+TGG 0.726215 2_2:-30393421 Msa0247760:CDS
GAAAGATGGAGTTCTTACCA+AGG 0.732357 2_2:-30395683 Msa0247760:CDS
ATTGCAGATAGCCATAACAA+GGG 0.737688 2_2:-30394983 Msa0247760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTAATAAAAAATATT+AGG - chr2_2:30393289-30393308 Msa0247760:three_prime_UTR 0.0%
!! CTATAAAAAACATTAATATT+AGG - chr2_2:30393325-30393344 Msa0247760:three_prime_UTR 10.0%
!!! TATTTTTGAAATAATTTACA+CGG + chr2_2:30393998-30394017 None:intergenic 10.0%
!!! TAGAAACTATTAATTTTCTT+TGG - chr2_2:30394096-30394115 Msa0247760:CDS 15.0%
!!! CTTAATTAAATATTTTTACC+TGG - chr2_2:30394155-30394174 Msa0247760:intron 15.0%
!!! CAAAATTGATAATTAGAAAT+TGG + chr2_2:30394187-30394206 None:intergenic 15.0%
!!! TATATATATCTTATGAGTTT+TGG + chr2_2:30394260-30394279 None:intergenic 15.0%
!!! TTTTATTATTGGCAATTTAT+AGG - chr2_2:30394300-30394319 Msa0247760:intron 15.0%
!!! TTGTTTTAATGTTTGTTTTA+TGG - chr2_2:30394564-30394583 Msa0247760:intron 15.0%
!!! ATTTTATTGAATGAAACAAA+TGG - chr2_2:30394709-30394728 Msa0247760:CDS 15.0%
!! ATTTCAACAAAAACAAATAT+TGG + chr2_2:30395484-30395503 None:intergenic 15.0%
!! TTGTTTATTTACAACTATAT+TGG - chr2_2:30396305-30396324 Msa0247760:CDS 15.0%
!! GAAATACAAAATTAAAGATA+AGG + chr2_2:30396813-30396832 None:intergenic 15.0%
!! AAAGTTCAAAAAATTTGAAA+TGG - chr2_2:30397464-30397483 Msa0247760:intron 15.0%
!! AAAAGACAATTAAAAAAGAA+CGG + chr2_2:30397553-30397572 None:intergenic 15.0%
!!! AGTTTAATTTTAAAACGATT+TGG - chr2_2:30398652-30398671 Msa0247760:intron 15.0%
!!! TATGATTTCATTTTTAAACT+CGG + chr2_2:30398823-30398842 None:intergenic 15.0%
!!! GGTTAATTTATATATTTTGT+CGG + chr2_2:30398957-30398976 None:intergenic 15.0%
!!! TTTTAATTTAGTCATAAGTT+AGG - chr2_2:30399880-30399899 Msa0247760:intron 15.0%
!!! GTCAACTTTTTCTTATAAAT+AGG + chr2_2:30393463-30393482 None:intergenic 20.0%
!!! GTAAACTGTTTCTTATAAAT+AGG - chr2_2:30393561-30393580 Msa0247760:CDS 20.0%
!! ATTAATCACTTTACACTTTA+AGG - chr2_2:30393613-30393632 Msa0247760:CDS 20.0%
!!! ACATTATGATTTGATTTGAT+TGG - chr2_2:30394043-30394062 Msa0247760:CDS 20.0%
!! ATTTATAGGTAAATTGTTAG+AGG - chr2_2:30394314-30394333 Msa0247760:intron 20.0%
!! TTTATAGGTAAATTGTTAGA+GGG - chr2_2:30394315-30394334 Msa0247760:intron 20.0%
!!! ATGATGATGTTTGTTTTAAA+GGG - chr2_2:30394659-30394678 Msa0247760:CDS 20.0%
!! ATAAAAAACTGATGCATTAA+AGG + chr2_2:30395211-30395230 None:intergenic 20.0%
!!! TCTATTCTTTTTTCATATGT+TGG - chr2_2:30395552-30395571 Msa0247760:intron 20.0%
!!! TAAAAAAGTACTTCAATAGT+TGG + chr2_2:30395665-30395684 None:intergenic 20.0%
!! AATATGTCAACATAAATAAG+TGG + chr2_2:30396754-30396773 None:intergenic 20.0%
!! AAGAAGAAAATAGTGATAAT+GGG + chr2_2:30396848-30396867 None:intergenic 20.0%
!! TTAAGACAAGAATATTTATC+AGG + chr2_2:30397814-30397833 None:intergenic 20.0%
!!! ACTTTTTCAACTACAATTTT+GGG + chr2_2:30398429-30398448 None:intergenic 20.0%
!! TTCAAAAGTAAACTAATCAA+TGG + chr2_2:30398633-30398652 None:intergenic 20.0%
!! CAAATTAATACCAAAAACTT+TGG + chr2_2:30399628-30399647 None:intergenic 20.0%
!! AATTTAACTGAAGAAATTTC+TGG - chr2_2:30399921-30399940 Msa0247760:intron 20.0%
!! ATTTAACTGAAGAAATTTCT+GGG - chr2_2:30399922-30399941 Msa0247760:intron 20.0%
! GTTAATATAAAAACCCGAAA+GGG + chr2_2:30393199-30393218 None:intergenic 25.0%
! AGTTAATATAAAAACCCGAA+AGG + chr2_2:30393200-30393219 None:intergenic 25.0%
! ATAACAAAAAATTTCACTCC+AGG + chr2_2:30393399-30393418 None:intergenic 25.0%
! TTGTTATCGTAACAAATTCA+TGG - chr2_2:30393412-30393431 Msa0247760:CDS 25.0%
!! CTTTTTCTTATAAATAGGAC+CGG + chr2_2:30393458-30393477 None:intergenic 25.0%
!! ATGTTTTTCTTATCACTACT+TGG - chr2_2:30393823-30393842 Msa0247760:intron 25.0%
! ATTTACTTTCTCTACAATTC+AGG - chr2_2:30394212-30394231 Msa0247760:intron 25.0%
! TTATAGGTAAATTGTTAGAG+GGG - chr2_2:30394316-30394335 Msa0247760:intron 25.0%
! TGCAAATTGAATTTGCAATT+AGG - chr2_2:30394364-30394383 Msa0247760:intron 25.0%
!!! GATGATGATGTTTGTTTTAA+AGG - chr2_2:30394658-30394677 Msa0247760:CDS 25.0%
! TTGAATGAAACAAATGGAAT+TGG - chr2_2:30394715-30394734 Msa0247760:CDS 25.0%
!!! TTATCTGTGTTCATTGATTT+TGG - chr2_2:30394854-30394873 Msa0247760:CDS 25.0%
! CATATAGCTCGAAAAAATAA+GGG + chr2_2:30394976-30394995 None:intergenic 25.0%
! ACATATAGCTCGAAAAAATA+AGG + chr2_2:30394977-30394996 None:intergenic 25.0%
! AATACCAATATCACATATGT+AGG + chr2_2:30395110-30395129 None:intergenic 25.0%
! ATGCAAGAATTCTAAGTTAA+TGG + chr2_2:30395262-30395281 None:intergenic 25.0%
!!! GAATTCTTGCATATTTTTTC+AGG - chr2_2:30395270-30395289 Msa0247760:CDS 25.0%
!!! TTTTTACTTCTAAGACTTTC+AGG + chr2_2:30395343-30395362 None:intergenic 25.0%
! TGAAAGTCTTAGAAGTAAAA+AGG - chr2_2:30395342-30395361 Msa0247760:CDS 25.0%
!! AAGTAAAAAGGTATGTAGTT+AGG - chr2_2:30395354-30395373 Msa0247760:CDS 25.0%
!! TCATTGACTACGTTATATAT+TGG + chr2_2:30395517-30395536 None:intergenic 25.0%
!!! TAAATCAATTTGCTGAATAC+GGG + chr2_2:30395924-30395943 None:intergenic 25.0%
!!! GTAAATCAATTTGCTGAATA+CGG + chr2_2:30395925-30395944 None:intergenic 25.0%
! AACCTATGAAGAAAAAAAGT+AGG - chr2_2:30395957-30395976 Msa0247760:CDS 25.0%
! ACCTATGAAGAAAAAAAGTA+GGG - chr2_2:30395958-30395977 Msa0247760:CDS 25.0%
!!! TTACAACTATATTGGTCTTA+AGG - chr2_2:30396313-30396332 Msa0247760:intron 25.0%
!!! TACAACTATATTGGTCTTAA+GGG - chr2_2:30396314-30396333 Msa0247760:intron 25.0%
! AACATAAATAAGTGGAATAC+AGG + chr2_2:30396746-30396765 None:intergenic 25.0%
! TGTTGACATATTTCAAATGT+TGG - chr2_2:30396762-30396781 Msa0247760:CDS 25.0%
! GAAGAAGAAAATAGTGATAA+TGG + chr2_2:30396849-30396868 None:intergenic 25.0%
!!! ATTCTGGGAATAGTTTTATA+TGG - chr2_2:30397117-30397136 Msa0247760:CDS 25.0%
!! TTGTTCTTATTTAGTTACGA+AGG - chr2_2:30397585-30397604 Msa0247760:CDS 25.0%
!! TGATTCTTTATATGCTTTTC+TGG - chr2_2:30397615-30397634 Msa0247760:intron 25.0%
! TTATGGGAAAGTAAAAACTT+CGG - chr2_2:30397952-30397971 Msa0247760:intron 25.0%
! TCACTATCTATACTTTCATT+CGG + chr2_2:30398141-30398160 None:intergenic 25.0%
!!! GACTTTTTCAACTACAATTT+TGG + chr2_2:30398430-30398449 None:intergenic 25.0%
! TGATGCTAAAGAAATTAACT+CGG + chr2_2:30398703-30398722 None:intergenic 25.0%
!!! TTTCATTTTTAAACTCGGTA+CGG + chr2_2:30398818-30398837 None:intergenic 25.0%
! TAAAAAACTAACGAAGTTTG+TGG + chr2_2:30398891-30398910 None:intergenic 25.0%
!! AACCAACTATATGAGTTTTA+TGG - chr2_2:30398973-30398992 Msa0247760:intron 25.0%
! AACCATAAAACTCATATAGT+TGG + chr2_2:30398978-30398997 None:intergenic 25.0%
! CTTATTCCATAAAATGTTTC+AGG - chr2_2:30399030-30399049 Msa0247760:intron 25.0%
!! TTGTAACCTGAAACATTTTA+TGG + chr2_2:30399039-30399058 None:intergenic 25.0%
!!! TAAAATGTTTCAGGTTACAA+TGG - chr2_2:30399039-30399058 Msa0247760:intron 25.0%
!!! ATTAACGGTTTTAGAATGTT+CGG - chr2_2:30399202-30399221 Msa0247760:intron 25.0%
! ACATTAGAAAAACTACAAAC+AGG + chr2_2:30399304-30399323 None:intergenic 25.0%
! GAACTAATACACGTATAATT+TGG - chr2_2:30399420-30399439 Msa0247760:intron 25.0%
! TAATACCAAAAACTTTGGTA+GGG + chr2_2:30399623-30399642 None:intergenic 25.0%
! TTAATACCAAAAACTTTGGT+AGG + chr2_2:30399624-30399643 None:intergenic 25.0%
! GATGAAATCAATACTACAAA+AGG - chr2_2:30399698-30399717 Msa0247760:intron 25.0%
! TTCCAAAACAAAGTACAAAA+GGG + chr2_2:30400021-30400040 None:intergenic 25.0%
! ATTCCAAAACAAAGTACAAA+AGG + chr2_2:30400022-30400041 None:intergenic 25.0%
! TGCAATAAATGATAAAATGC+AGG - chr2_2:30400149-30400168 Msa0247760:CDS 25.0%
! GCAATAAATGATAAAATGCA+GGG - chr2_2:30400150-30400169 Msa0247760:CDS 25.0%
!!! TTATGCTTGCTGTTTTTTCA+GGG + chr2_2:30393060-30393079 None:intergenic 30.0%
!!! TTTATGCTTGCTGTTTTTTC+AGG + chr2_2:30393061-30393080 None:intergenic 30.0%
! TTTTCACACAAGACTAGATT+TGG - chr2_2:30393353-30393372 Msa0247760:three_prime_UTR 30.0%
!! CCAGGCTTTATTTATTCTAT+AGG + chr2_2:30393381-30393400 None:intergenic 30.0%
CCTATAGAATAAATAAAGCC+TGG - chr2_2:30393378-30393397 Msa0247760:CDS 30.0%
TTGTTATAAATTACTCCCTC+CGG - chr2_2:30393436-30393455 Msa0247760:CDS 30.0%
! CTGTTTCTTATAAATAGGAC+TGG - chr2_2:30393566-30393585 Msa0247760:CDS 30.0%
TTTCTTATAAATAGGACTGG+AGG - chr2_2:30393569-30393588 Msa0247760:CDS 30.0%
ATTAGAAATTGGAATTGACC+AGG + chr2_2:30394176-30394195 None:intergenic 30.0%
TGGAATCTAATGCTCTTATA+TGG + chr2_2:30394240-30394259 None:intergenic 30.0%
GTTTGAAAATCTAACCTCTT+TGG + chr2_2:30394744-30394763 None:intergenic 30.0%
AGAGAAATCATGCATTGTTA+GGG + chr2_2:30394766-30394785 None:intergenic 30.0%
AAGAGAAATCATGCATTGTT+AGG + chr2_2:30394767-30394786 None:intergenic 30.0%
TAACATTGTATCTCTGTTTC+TGG - chr2_2:30394925-30394944 Msa0247760:CDS 30.0%
GTAACCTACATATGTGATAT+TGG - chr2_2:30395103-30395122 Msa0247760:CDS 30.0%
AAAAACTGATGCATTAAAGG+AGG + chr2_2:30395208-30395227 None:intergenic 30.0%
! GCAAGAAAAGTACAAAAGAT+TGG + chr2_2:30395403-30395422 None:intergenic 30.0%
TTCCTATTTGTTCCAAAGAA+CGG + chr2_2:30395425-30395444 None:intergenic 30.0%
TCAATAGTTGGATGAAAAAC+AGG + chr2_2:30395653-30395672 None:intergenic 30.0%
CGATATAAACGATATGAAGA+TGG + chr2_2:30395697-30395716 None:intergenic 30.0%
AGATATCTTTGTCCTTAAGA+AGG + chr2_2:30395880-30395899 None:intergenic 30.0%
TTCTTAAGGACAAAGATATC+TGG - chr2_2:30395879-30395898 Msa0247760:CDS 30.0%
TCTTAAGGACAAAGATATCT+GGG - chr2_2:30395880-30395899 Msa0247760:CDS 30.0%
CCTATGAAGAAAAAAAGTAG+GGG - chr2_2:30395959-30395978 Msa0247760:CDS 30.0%
AAAGTCTTTAAACGTGAAGT+CGG + chr2_2:30396104-30396123 None:intergenic 30.0%
!! ACTTTAAGGAATGCTACTTT+GGG - chr2_2:30396140-30396159 Msa0247760:intron 30.0%
TTGAAAGATGCAAATGAAGA+TGG - chr2_2:30396163-30396182 Msa0247760:intron 30.0%
ACGATACACTCTTATATTGT+AGG - chr2_2:30396362-30396381 Msa0247760:intron 30.0%
CTTATATTGTAGGTGTACTA+TGG - chr2_2:30396372-30396391 Msa0247760:intron 30.0%
! ATTTGGAAGTGGTTTTTCTA+AGG - chr2_2:30396416-30396435 Msa0247760:intron 30.0%
GTAGATAATTAAGCGAATAG+AGG + chr2_2:30396895-30396914 None:intergenic 30.0%
TCGCTTAATTATCTACACTT+TGG - chr2_2:30396899-30396918 Msa0247760:intron 30.0%
CAGAACTTTCACTATATTCT+GGG - chr2_2:30397102-30397121 Msa0247760:CDS 30.0%
TCCATCAATTCTTAAAGATG+AGG - chr2_2:30397177-30397196 Msa0247760:CDS 30.0%
CCATCAATTCTTAAAGATGA+GGG - chr2_2:30397178-30397197 Msa0247760:CDS 30.0%
!! AATTTGTCATTACTTTTCCG+AGG - chr2_2:30397236-30397255 Msa0247760:CDS 30.0%
!! ATTTGTCATTACTTTTCCGA+GGG - chr2_2:30397237-30397256 Msa0247760:CDS 30.0%
TTGTAAACTGTAAAGCTCAA+CGG + chr2_2:30397350-30397369 None:intergenic 30.0%
! TCACATGACAAGCTTTTATT+TGG - chr2_2:30397388-30397407 Msa0247760:CDS 30.0%
AATCATTACCTTAAATGCCT+TGG + chr2_2:30397521-30397540 None:intergenic 30.0%
GATAGTCATAGACAAAGATA+AGG - chr2_2:30398173-30398192 Msa0247760:intron 30.0%
ATGTTGTTCAGAGACAAAAA+AGG - chr2_2:30398245-30398264 Msa0247760:intron 30.0%
AAAAAAGGAACAAGACAACA+TGG - chr2_2:30398260-30398279 Msa0247760:intron 30.0%
CACAATTCTTGTACATTTGA+TGG - chr2_2:30398354-30398373 Msa0247760:intron 30.0%
AATTCTTGTACATTTGATGG+TGG - chr2_2:30398357-30398376 Msa0247760:intron 30.0%
AAGCATGCAATATATCCAAA+AGG - chr2_2:30398570-30398589 Msa0247760:intron 30.0%
!! GATTTGGTAAACACTTTTGT+AGG - chr2_2:30398668-30398687 Msa0247760:intron 30.0%
! TATATATTTTGTCGGAGTCA+CGG + chr2_2:30398949-30398968 None:intergenic 30.0%
TGTTTACATTACCTGAACAA+TGG + chr2_2:30399242-30399261 None:intergenic 30.0%
TAATCCAGTTCAAAGCAATT+TGG + chr2_2:30399363-30399382 None:intergenic 30.0%
CTGGATTAACATGCTTATTA+CGG - chr2_2:30399375-30399394 Msa0247760:intron 30.0%
AAGATCATAAACGATTCTTC+TGG - chr2_2:30399444-30399463 Msa0247760:intron 30.0%
! TGGTATTAATTTGACTGATC+AGG - chr2_2:30399635-30399654 Msa0247760:intron 30.0%
! ATTCAGAAAGCTTTGTAGAT+AGG - chr2_2:30399816-30399835 Msa0247760:intron 30.0%
TTAAAATGACTATCCAACGT+CGG + chr2_2:30399866-30399885 None:intergenic 30.0%
CAAGTACCAAAATTTCATCT+AGG + chr2_2:30399953-30399972 None:intergenic 30.0%
TGCAAAATGCATCTGTAATT+AGG + chr2_2:30399993-30400012 None:intergenic 30.0%
TCTGTTTCAAAAACCCGAAA+GGG + chr2_2:30393176-30393195 None:intergenic 35.0%
!!! GTTTTTGAAACAGACCCTTT+CGG - chr2_2:30393182-30393201 Msa0247760:three_prime_UTR 35.0%
!!! TTTTTGAAACAGACCCTTTC+GGG - chr2_2:30393183-30393202 Msa0247760:three_prime_UTR 35.0%
TTCTTATAAATAGGACCGGA+GGG + chr2_2:30393454-30393473 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG + chr2_2:30393455-30393474 None:intergenic 35.0%
ACGTTGTGATTGCGTATAAA+TGG + chr2_2:30394436-30394455 None:intergenic 35.0%
ATTTATACGCAATCACAACG+TGG - chr2_2:30394435-30394454 Msa0247760:CDS 35.0%
AGAAGTTGAAAACCGTTTCT+GGG - chr2_2:30394606-30394625 Msa0247760:intron 35.0%
AAAACAACACAACCCAGAAA+CGG + chr2_2:30394621-30394640 None:intergenic 35.0%
!!! CTCTTATCCTCTGTTTTTTG+TGG - chr2_2:30394806-30394825 Msa0247760:CDS 35.0%
TTGTGATCCACAAAAAACAG+AGG + chr2_2:30394816-30394835 None:intergenic 35.0%
TTTCCAGAAAACCTAATCGA+CGG + chr2_2:30395038-30395057 None:intergenic 35.0%
! ATCATGTGATTCCGTTGATT+AGG - chr2_2:30395072-30395091 Msa0247760:CDS 35.0%
!! GATTCCGTTGATTAGGTTTT+CGG - chr2_2:30395079-30395098 Msa0247760:CDS 35.0%
TACTCCGAAAACCTAATCAA+CGG + chr2_2:30395086-30395105 None:intergenic 35.0%
!!! TTTTTCAGGATAGTCCTCTT+CGG - chr2_2:30395284-30395303 Msa0247760:CDS 35.0%
ACAGGTGCTTCATCAATTAT+GGG + chr2_2:30395635-30395654 None:intergenic 35.0%
AACAGGTGCTTCATCAATTA+TGG + chr2_2:30395636-30395655 None:intergenic 35.0%
TTTGTTTACTCTGTTTCCTC+AGG - chr2_2:30395754-30395773 Msa0247760:CDS 35.0%
AATGTATCTTCAAACTCCTG+AGG + chr2_2:30395773-30395792 None:intergenic 35.0%
!!! CCCCTACTTTTTTTCTTCAT+AGG + chr2_2:30395962-30395981 None:intergenic 35.0%
TGAAGAAAAAAAGTAGGGGA+AGG - chr2_2:30395963-30395982 Msa0247760:CDS 35.0%
! TCTGAAGCTGATGAGAAATA+CGG - chr2_2:30396064-30396083 Msa0247760:intron 35.0%
AGAAATACGGATTTCAAGCA+GGG - chr2_2:30396077-30396096 Msa0247760:intron 35.0%
CAAAGTAGCATTCCTTAAAG+TGG + chr2_2:30396141-30396160 None:intergenic 35.0%
! CACTTTAAGGAATGCTACTT+TGG - chr2_2:30396139-30396158 Msa0247760:intron 35.0%
AGGAAATTGAAGGTGAATAC+TGG - chr2_2:30396233-30396252 Msa0247760:CDS 35.0%
AAATTGAAGGTGAATACTGG+CGG - chr2_2:30396236-30396255 Msa0247760:CDS 35.0%
TCAAAACTTAGTACAGAACC+TGG + chr2_2:30396516-30396535 None:intergenic 35.0%
!! GGTTCTGTACTAAGTTTTGA+AGG - chr2_2:30396516-30396535 Msa0247760:intron 35.0%
! TGTGCTTTTCATCGTTTTGT+TGG - chr2_2:30396583-30396602 Msa0247760:intron 35.0%
!! GTGCTTTTCATCGTTTTGTT+GGG - chr2_2:30396584-30396603 Msa0247760:intron 35.0%
! ACAGAGTTTAAGACATGACA+TGG - chr2_2:30396653-30396672 Msa0247760:CDS 35.0%
TCGAGAGATAAAAGACATAC+AGG + chr2_2:30396720-30396739 None:intergenic 35.0%
! ACTTTGGTGACTCAAAGATA+TGG - chr2_2:30396915-30396934 Msa0247760:intron 35.0%
ACCAAATCTACTCAATGATC+TGG - chr2_2:30397015-30397034 Msa0247760:CDS 35.0%
ACCAGATCATTGAGTAGATT+TGG + chr2_2:30397019-30397038 None:intergenic 35.0%
CCTGCTATTAACACAATGAT+AGG + chr2_2:30397064-30397083 None:intergenic 35.0%
CCTATCATTGTGTTAATAGC+AGG - chr2_2:30397061-30397080 Msa0247760:CDS 35.0%
CCAGAATATAGTGAAAGTTC+TGG + chr2_2:30397104-30397123 None:intergenic 35.0%
CCAGAACTTTCACTATATTC+TGG - chr2_2:30397101-30397120 Msa0247760:CDS 35.0%
! TATGATTTTCATGTTCACGC+AGG - chr2_2:30397141-30397160 Msa0247760:CDS 35.0%
! CCCTCATCTTTAAGAATTGA+TGG + chr2_2:30397181-30397200 None:intergenic 35.0%
!! TTTGTCATTACTTTTCCGAG+GGG - chr2_2:30397238-30397257 Msa0247760:CDS 35.0%
CATGTGACAATGATGTCTTA+CGG + chr2_2:30397375-30397394 None:intergenic 35.0%
! AGTTCTTACCAAGGCATTTA+AGG - chr2_2:30397510-30397529 Msa0247760:intron 35.0%
TTCAGCGACTTAAAATGAGT+TGG + chr2_2:30397700-30397719 None:intergenic 35.0%
!! TCATTTTAAGTCGCTGAAGA+TGG - chr2_2:30397702-30397721 Msa0247760:intron 35.0%
!! CATTTTAAGTCGCTGAAGAT+GGG - chr2_2:30397703-30397722 Msa0247760:intron 35.0%
! AAATTGCTTGAAGCACTAGA+AGG - chr2_2:30397910-30397929 Msa0247760:intron 35.0%
ATTCACTTGCTCTTGAGTTA+TGG - chr2_2:30397935-30397954 Msa0247760:intron 35.0%
TTCACTTGCTCTTGAGTTAT+GGG - chr2_2:30397936-30397955 Msa0247760:intron 35.0%
GGAAAGTAAAAACTTCGGAA+TGG - chr2_2:30397957-30397976 Msa0247760:intron 35.0%
ATGAATAAACAAGAGGTGGA+TGG - chr2_2:30398006-30398025 Msa0247760:intron 35.0%
! ATGACTATTTGACTTATCCC+TGG + chr2_2:30398067-30398086 None:intergenic 35.0%
AGTCATAGACAAAGATAAGG+CGG - chr2_2:30398176-30398195 Msa0247760:intron 35.0%
TATTGCAGATAGCCATAACA+AGG - chr2_2:30398200-30398219 Msa0247760:intron 35.0%
ATTGCAGATAGCCATAACAA+GGG - chr2_2:30398201-30398220 Msa0247760:intron 35.0%
!! ATTTGATGGTGGAAAACTTG+AGG - chr2_2:30398368-30398387 Msa0247760:intron 35.0%
TTCTGTCAAGCCTATAAGTT+TGG - chr2_2:30398515-30398534 Msa0247760:intron 35.0%
TCTGTCAAGCCTATAAGTTT+GGG - chr2_2:30398516-30398535 Msa0247760:intron 35.0%
ACAACAGATCCCAAACTTAT+AGG + chr2_2:30398528-30398547 None:intergenic 35.0%
ACATAGCTACAGATTCTTGT+TGG + chr2_2:30398731-30398750 None:intergenic 35.0%
!! GTTTCTGAAGTAATTGATGC+TGG - chr2_2:30398749-30398768 Msa0247760:intron 35.0%
CAGAATGATACCTTGAAAAG+AGG + chr2_2:30398785-30398804 None:intergenic 35.0%
!! CTCTTTTCAAGGTATCATTC+TGG - chr2_2:30398783-30398802 Msa0247760:intron 35.0%
CCATGAACGGTAAAAAAAAG+AGG + chr2_2:30398868-30398887 None:intergenic 35.0%
!!! CCTCTTTTTTTTACCGTTCA+TGG - chr2_2:30398865-30398884 Msa0247760:intron 35.0%
!! AATGTTTCAGGTTACAATGG+AGG - chr2_2:30399042-30399061 Msa0247760:intron 35.0%
! AATGCTTTTCAGAAGCTCTA+AGG + chr2_2:30399185-30399204 None:intergenic 35.0%
!! GAGCTTCTGAAAAGCATTAA+CGG - chr2_2:30399187-30399206 Msa0247760:intron 35.0%
TACATTACCTGAACAATGGA+CGG + chr2_2:30399238-30399257 None:intergenic 35.0%
AGTTCAAAGCAATTTGGTAG+AGG + chr2_2:30399357-30399376 None:intergenic 35.0%
! TCTACCAAATTGCTTTGAAC+TGG - chr2_2:30399356-30399375 Msa0247760:intron 35.0%
! ATGTTCCGACAAACATTTTC+AGG - chr2_2:30399482-30399501 Msa0247760:intron 35.0%
! GTGAAGCCTAGATGAAATTT+TGG - chr2_2:30399944-30399963 Msa0247760:intron 35.0%
ATTAGGTCAATGATGATCGA+GGG + chr2_2:30399976-30399995 None:intergenic 35.0%
AATTAGGTCAATGATGATCG+AGG + chr2_2:30399977-30399996 None:intergenic 35.0%
!! GACCCTTTTGTACTTTGTTT+TGG - chr2_2:30400016-30400035 Msa0247760:intron 35.0%
!!! GTTTTGGAATTTGCCTTTCA+AGG - chr2_2:30400032-30400051 Msa0247760:intron 35.0%
GAATTTGCCTTTCAAGGTTA+AGG - chr2_2:30400038-30400057 Msa0247760:intron 35.0%
!! TTAGCTTTTGCTCGAATCAT+AGG - chr2_2:30400063-30400082 Msa0247760:intron 35.0%
GTCTGTTTCAAAAACCCGAA+AGG + chr2_2:30393177-30393196 None:intergenic 40.0%
! ACACTTAAGAGGAGTACGAT+CGG - chr2_2:30393654-30393673 Msa0247760:CDS 40.0%
ATGCTAGTAGGGTGTAATTG+TGG + chr2_2:30393861-30393880 None:intergenic 40.0%
CGGAAAACACTATGCTAGTA+GGG + chr2_2:30393872-30393891 None:intergenic 40.0%
TCGGAAAACACTATGCTAGT+AGG + chr2_2:30393873-30393892 None:intergenic 40.0%
! AACTCTCTTTTGCTGCATTG+AGG - chr2_2:30394469-30394488 Msa0247760:CDS 40.0%
! ACTCTCTTTTGCTGCATTGA+GGG - chr2_2:30394470-30394489 Msa0247760:CDS 40.0%
GAGAAGTTGAAAACCGTTTC+TGG - chr2_2:30394605-30394624 Msa0247760:intron 40.0%
AATGGAATTGGATGCCAAAG+AGG - chr2_2:30394727-30394746 Msa0247760:CDS 40.0%
! ATCATGTGATACCGTCGATT+AGG - chr2_2:30395024-30395043 Msa0247760:CDS 40.0%
!! ATACCGTCGATTAGGTTTTC+TGG - chr2_2:30395032-30395051 Msa0247760:CDS 40.0%
!!! TTTTTAGGTTTGTGCCGAAG+AGG + chr2_2:30395301-30395320 None:intergenic 40.0%
TCTTCGGCACAAACCTAAAA+AGG - chr2_2:30395300-30395319 Msa0247760:CDS 40.0%
! TCAGGTGCATTGTCCTTTTT+AGG + chr2_2:30395316-30395335 None:intergenic 40.0%
! GTACTTTTCTTGCCGTTCTT+TGG - chr2_2:30395410-30395429 Msa0247760:CDS 40.0%
!! TGCCGTTCTTTGGAACAAAT+AGG - chr2_2:30395420-30395439 Msa0247760:CDS 40.0%
TGTTGCAGATATCAGCTAGA+TGG - chr2_2:30395588-30395607 Msa0247760:intron 40.0%
GTTGCAGATATCAGCTAGAT+GGG - chr2_2:30395589-30395608 Msa0247760:intron 40.0%
TCTTTGTCCTTAAGAAGGCA+AGG + chr2_2:30395875-30395894 None:intergenic 40.0%
!! ATCAATTTGCTGAATACGGG+TGG + chr2_2:30395921-30395940 None:intergenic 40.0%
ACTCCAAATCAGGAACATGT+AGG - chr2_2:30396005-30396024 Msa0247760:CDS 40.0%
TCTCCTACATGTTCCTGATT+TGG + chr2_2:30396011-30396030 None:intergenic 40.0%
! ATTAGCTTCAGAAGCTGACT+TGG + chr2_2:30396038-30396057 None:intergenic 40.0%
GAGAAATACGGATTTCAAGC+AGG - chr2_2:30396076-30396095 Msa0247760:intron 40.0%
! GCAATATGCTAGCCACTTTA+AGG - chr2_2:30396126-30396145 Msa0247760:intron 40.0%
ATAGTAACCTCCAAAACCGA+AGG - chr2_2:30396197-30396216 Msa0247760:CDS 40.0%
TAGTAACCTCCAAAACCGAA+GGG - chr2_2:30396198-30396217 Msa0247760:CDS 40.0%
TTCACCTTCAATTTCCTCCT+CGG + chr2_2:30396230-30396249 None:intergenic 40.0%
AATACCTCAACTTCATCCGT+TGG + chr2_2:30396274-30396293 None:intergenic 40.0%
ATTGTAGGTGTACTATGGAG+CGG - chr2_2:30396377-30396396 Msa0247760:intron 40.0%
! GACTTGGAAACTGGAGTATT+TGG - chr2_2:30396399-30396418 Msa0247760:intron 40.0%
! GAAACTGGAGTATTTGGAAG+TGG - chr2_2:30396405-30396424 Msa0247760:intron 40.0%
! TAAGGCATCATCCATACCTA+AGG - chr2_2:30396434-30396453 Msa0247760:intron 40.0%
! AAGGCATCATCCATACCTAA+GGG - chr2_2:30396435-30396454 Msa0247760:intron 40.0%
ATCCATACCTAAGGGTTATC+CGG - chr2_2:30396443-30396462 Msa0247760:intron 40.0%
! ATCAGTATGCACTTTCTGGT+TGG - chr2_2:30396466-30396485 Msa0247760:intron 40.0%
TTTGAAGGAAGTGACATCTC+AGG - chr2_2:30396531-30396550 Msa0247760:intron 40.0%
!! TCATCGTTTTGTTGGGTAAG+TGG - chr2_2:30396591-30396610 Msa0247760:intron 40.0%
CTTCTTCTAACAGCATGTTG+AGG - chr2_2:30396862-30396881 Msa0247760:intron 40.0%
GGTGACTCAAAGATATGGTA+TGG - chr2_2:30396920-30396939 Msa0247760:CDS 40.0%
! AAGATATGGTATGGAGTACC+TGG - chr2_2:30396929-30396948 Msa0247760:CDS 40.0%
!! TTGTCATTACTTTTCCGAGG+GGG - chr2_2:30397239-30397258 Msa0247760:CDS 40.0%
TGTAAAGCTCAACGGCATTT+AGG + chr2_2:30397342-30397361 None:intergenic 40.0%
!! GCTTTTATTTGGATCATCGC+TGG - chr2_2:30397399-30397418 Msa0247760:CDS 40.0%
!! ATGAAGAGTTAGCTCTGCAA+GGG + chr2_2:30397437-30397456 None:intergenic 40.0%
AGAGCTAACTCTTCATGGAA+AGG - chr2_2:30397441-30397460 Msa0247760:intron 40.0%
TTGAAATGGAGAAGCTACTG+TGG - chr2_2:30397478-30397497 Msa0247760:intron 40.0%
TGAAATGGAGAAGCTACTGT+GGG - chr2_2:30397479-30397498 Msa0247760:intron 40.0%
GAAAGATGGAGTTCTTACCA+AGG - chr2_2:30397501-30397520 Msa0247760:intron 40.0%
TCCTTGCCTGTCAGAAAAAA+CGG + chr2_2:30397645-30397664 None:intergenic 40.0%
GGATAAAGATGGAAGAAGAG+AGG - chr2_2:30397662-30397681 Msa0247760:intron 40.0%
GACTTGTATCTATCTGCTGT+CGG - chr2_2:30397775-30397794 Msa0247760:intron 40.0%
TTTGTTCTGCTCATGCGAAA+TGG - chr2_2:30397843-30397862 Msa0247760:CDS 40.0%
TCATGAAGAAACTGGTTGTG+CGG - chr2_2:30398038-30398057 Msa0247760:intron 40.0%
CTACTGAATCACCCTTGTTA+TGG + chr2_2:30398215-30398234 None:intergenic 40.0%
TAACAAGGGTGATTCAGTAG+AGG - chr2_2:30398215-30398234 Msa0247760:intron 40.0%
CAACAGAAGATGAAGGTGAT+AGG + chr2_2:30398299-30398318 None:intergenic 40.0%
GTCTTCACAACAGAAGATGA+AGG + chr2_2:30398306-30398325 None:intergenic 40.0%
CAGAAGTTTCATCATGCTCT+AGG - chr2_2:30398325-30398344 Msa0247760:intron 40.0%
CAAAGATATACTCGCATTCG+TGG + chr2_2:30398460-30398479 None:intergenic 40.0%
! AGTTTGGGATCTGTTGTTCA+TGG - chr2_2:30398531-30398550 Msa0247760:intron 40.0%
! GTTTGGGATCTGTTGTTCAT+GGG - chr2_2:30398532-30398551 Msa0247760:intron 40.0%
! ATCCAAAAGGTATGCTGTAG+TGG - chr2_2:30398583-30398602 Msa0247760:intron 40.0%
! TCCAAAAGGTATGCTGTAGT+GGG - chr2_2:30398584-30398603 Msa0247760:intron 40.0%
!! TGCTGTAGTGGGATCTTTTA+TGG - chr2_2:30398595-30398614 Msa0247760:intron 40.0%
GTAATTGATGCTGGACTTCT+AGG - chr2_2:30398758-30398777 Msa0247760:intron 40.0%
!!! ACTTCTAGGACCTCTTTTCA+AGG - chr2_2:30398772-30398791 Msa0247760:intron 40.0%
TTAAACTCGGTACGGAAACA+AGG + chr2_2:30398810-30398829 None:intergenic 40.0%
!! ATGTCCAAGTGTCACTTTCA+CGG - chr2_2:30399066-30399085 Msa0247760:intron 40.0%
AAACCTCAGCAGATAAGTGT+TGG - chr2_2:30399089-30399108 Msa0247760:intron 40.0%
AACCTCAGCAGATAAGTGTT+GGG - chr2_2:30399090-30399109 Msa0247760:intron 40.0%
GTGACAAAATCACAGAGCAA+AGG - chr2_2:30399134-30399153 Msa0247760:intron 40.0%
!!! CTTTTCAGAAGCTCTAAGGA+AGG + chr2_2:30399181-30399200 None:intergenic 40.0%
GATGGCCTGAAAATGTTTGT+CGG + chr2_2:30399490-30399509 None:intergenic 40.0%
!! GCAGAGTATTGGAATCACAA+AGG - chr2_2:30399537-30399556 Msa0247760:intron 40.0%
TAGGGCTACTTGAACAACAT+AGG + chr2_2:30399605-30399624 None:intergenic 40.0%
! AGTAGCCCTACCAAAGTTTT+TGG - chr2_2:30399615-30399634 Msa0247760:intron 40.0%
ATCTCAATTCTTTCCGACGT+TGG - chr2_2:30399850-30399869 Msa0247760:intron 40.0%
GCTAAAGCCTTAACCTTGAA+AGG + chr2_2:30400048-30400067 None:intergenic 40.0%
AAATGCAGGGAAACTACACA+CGG - chr2_2:30400163-30400182 Msa0247760:CDS 40.0%
!!! CTGTTTTTTCAGGGAGCTGT+TGG + chr2_2:30393051-30393070 None:intergenic 45.0%
TTAAGCGAACCAGACCCTTT+CGG - chr2_2:30393159-30393178 Msa0247760:three_prime_UTR 45.0%
TTCAAAAACCCGAAAGGGTC+TGG + chr2_2:30393171-30393190 None:intergenic 45.0%
CTTAAGTGTTCCAGCGTGAA+TGG + chr2_2:30393643-30393662 None:intergenic 45.0%
TTCACGCTGGAACACTTAAG+AGG - chr2_2:30393643-30393662 Msa0247760:CDS 45.0%
CAATACACTTTCGCTCTCGT+CGG + chr2_2:30393892-30393911 None:intergenic 45.0%
!! GGGTATCTGTGTTTTGTTGC+AGG - chr2_2:30394679-30394698 Msa0247760:CDS 45.0%
CTAAGACTTTCAGGAGACTC+AGG + chr2_2:30395334-30395353 None:intergenic 45.0%
TATGCCGTAAGGTTCAGCTA+GGG + chr2_2:30395819-30395838 None:intergenic 45.0%
ATATGCCGTAAGGTTCAGCT+AGG + chr2_2:30395820-30395839 None:intergenic 45.0%
CTGAACCTTACGGCATATGT+AGG - chr2_2:30395822-30395841 Msa0247760:CDS 45.0%
ACGATCCTACATATGCCGTA+AGG + chr2_2:30395830-30395849 None:intergenic 45.0%
TTGTCCTTAAGAAGGCAAGG+TGG + chr2_2:30395872-30395891 None:intergenic 45.0%
GAAGGAAGCGAAAACGTAGA+AGG - chr2_2:30395981-30396000 Msa0247760:CDS 45.0%
CGTAGAAGGAACTCCAAATC+AGG - chr2_2:30395995-30396014 Msa0247760:CDS 45.0%
ATCCGGATAACCCTTAGGTA+TGG + chr2_2:30396448-30396467 None:intergenic 45.0%
TACTGATCCGGATAACCCTT+AGG + chr2_2:30396453-30396472 None:intergenic 45.0%
! CCAGAAAGTGCATACTGATC+CGG + chr2_2:30396465-30396484 None:intergenic 45.0%
!! TCTCAGGAGTACTAGTTCCA+TGG - chr2_2:30396547-30396566 Msa0247760:intron 45.0%
CTAGTTCCATGGCTGTATGT+TGG - chr2_2:30396558-30396577 Msa0247760:intron 45.0%
CAGGCTATCGAGAGAGAAAA+AGG + chr2_2:30396701-30396720 None:intergenic 45.0%
! AGCCATGCTTCTGCTTTAGA+AGG - chr2_2:30396953-30396972 Msa0247760:CDS 45.0%
!! CACCTTCTAAAGCAGAAGCA+TGG + chr2_2:30396958-30396977 None:intergenic 45.0%
GGTACTTCCTCGAACAAATC+AGG + chr2_2:30396998-30397017 None:intergenic 45.0%
TGCTGAACAGTGCGATATAC+GGG + chr2_2:30397208-30397227 None:intergenic 45.0%
GTGCTGAACAGTGCGATATA+CGG + chr2_2:30397209-30397228 None:intergenic 45.0%
TACCACTCTGGGTTCAATTG+TGG - chr2_2:30397262-30397281 Msa0247760:CDS 45.0%
ACCACTCTGGGTTCAATTGT+GGG - chr2_2:30397263-30397282 Msa0247760:CDS 45.0%
TGAATGTTGCTCCTGTCGAT+TGG - chr2_2:30397305-30397324 Msa0247760:CDS 45.0%
!! CATGAAGAGTTAGCTCTGCA+AGG + chr2_2:30397438-30397457 None:intergenic 45.0%
CTTGCAGAGCTAACTCTTCA+TGG - chr2_2:30397436-30397455 Msa0247760:intron 45.0%
AGAAGCTACTGTGGGAAAGA+TGG - chr2_2:30397487-30397506 Msa0247760:intron 45.0%
!!! GGTTACCCGTTTTTTCTGAC+AGG - chr2_2:30397636-30397655 Msa0247760:intron 45.0%
CCTTGCCTGTCAGAAAAAAC+GGG + chr2_2:30397644-30397663 None:intergenic 45.0%
CTGACAGGCAAGGATAAAGA+TGG - chr2_2:30397651-30397670 Msa0247760:intron 45.0%
GACAAGGGTCATGAAGAAAC+TGG - chr2_2:30398030-30398049 Msa0247760:intron 45.0%
CATGAAGAAACTGGTTGTGC+GGG - chr2_2:30398039-30398058 Msa0247760:intron 45.0%
ACTTGAGGTGCATCTGCAAA+TGG - chr2_2:30398383-30398402 Msa0247760:intron 45.0%
CTGTTGTTCATGGGAAGCTA+TGG - chr2_2:30398541-30398560 Msa0247760:intron 45.0%
! TCCCACTACAGCATACCTTT+TGG + chr2_2:30398588-30398607 None:intergenic 45.0%
ACGAAGTTTGTGGCCATGAA+CGG + chr2_2:30398881-30398900 None:intergenic 45.0%
GTTTCCGTGAAAGTGACACT+TGG + chr2_2:30399073-30399092 None:intergenic 45.0%
TTCCCAACACTTATCTGCTG+AGG + chr2_2:30399095-30399114 None:intergenic 45.0%
ATCACAGAGCAAAGGAGTCT+AGG - chr2_2:30399142-30399161 Msa0247760:intron 45.0%
CCTGAACAATGGACGGTAAA+GGG + chr2_2:30399231-30399250 None:intergenic 45.0%
ACCTGAACAATGGACGGTAA+AGG + chr2_2:30399232-30399251 None:intergenic 45.0%
TACTCTGCACACTGATGACT+GGG + chr2_2:30399525-30399544 None:intergenic 45.0%
ATACTCTGCACACTGATGAC+TGG + chr2_2:30399526-30399545 None:intergenic 45.0%
GTCATCAGTGTGCAGAGTAT+TGG - chr2_2:30399526-30399545 Msa0247760:intron 45.0%
AAAGGTTTCCCTACATCTCC+AGG - chr2_2:30399555-30399574 Msa0247760:intron 45.0%
TGACACTTCCTGGAGATGTA+GGG + chr2_2:30399566-30399585 None:intergenic 45.0%
ATGACACTTCCTGGAGATGT+AGG + chr2_2:30399567-30399586 None:intergenic 45.0%
CAGTTATCGATGACACTTCC+TGG + chr2_2:30399576-30399595 None:intergenic 45.0%
CAGGCGAAAGACAACATAGA+AGG - chr2_2:30399654-30399673 Msa0247760:intron 45.0%
!!! CTTTATTATTTTTTTATTAT+TGG - chr2_2:30394289-30394308 Msa0247760:intron 5.0%
! CTTGGATTTTGCTACCGTGC+TGG + chr2_2:30393026-30393045 None:intergenic 50.0%
ACGCGTAAGAACTCAGATCG+AGG - chr2_2:30393099-30393118 Msa0247760:three_prime_UTR 50.0%
CGCGTAAGAACTCAGATCGA+GGG - chr2_2:30393100-30393119 Msa0247760:three_prime_UTR 50.0%
GGGTCTGGATACTGACGTAT+TGG + chr2_2:30393132-30393151 None:intergenic 50.0%
CGTCAGTATCCAGACCCTTT+CGG - chr2_2:30393135-30393154 Msa0247760:three_prime_UTR 50.0%
GTCAGTATCCAGACCCTTTC+GGG - chr2_2:30393136-30393155 Msa0247760:three_prime_UTR 50.0%
! CTGGTTCGCTTAACCCGAAA+GGG + chr2_2:30393152-30393171 None:intergenic 50.0%
! TCTGGTTCGCTTAACCCGAA+AGG + chr2_2:30393153-30393172 None:intergenic 50.0%
TAAGCGAACCAGACCCTTTC+GGG - chr2_2:30393160-30393179 Msa0247760:three_prime_UTR 50.0%
TTAAGGTGAGCCATTCACGC+TGG - chr2_2:30393630-30393649 Msa0247760:CDS 50.0%
! CGACGAGAGCGAAAGTGTAT+TGG - chr2_2:30393890-30393909 Msa0247760:intron 50.0%
! GGGATCCATCTGAAGCATGT+CGG - chr2_2:30395609-30395628 Msa0247760:intron 50.0%
ATGCCGTAAGGTTCAGCTAG+GGG + chr2_2:30395818-30395837 None:intergenic 50.0%
GGTTCCACCTTGCCTTCTTA+AGG - chr2_2:30395865-30395884 Msa0247760:CDS 50.0%
CCTTCAATTTCCTCCTCGGA+GGG + chr2_2:30396226-30396245 None:intergenic 50.0%
ACCTTCAATTTCCTCCTCGG+AGG + chr2_2:30396227-30396246 None:intergenic 50.0%
! TATGGAGCGGACTTGGAAAC+TGG - chr2_2:30396390-30396409 Msa0247760:intron 50.0%
CCGGATCAGTATGCACTTTC+TGG - chr2_2:30396462-30396481 Msa0247760:intron 50.0%
AATAACTTCCCGCGACTACC+AGG - chr2_2:30396495-30396514 Msa0247760:intron 50.0%
AGTACAGAACCTGGTAGTCG+CGG + chr2_2:30396507-30396526 None:intergenic 50.0%
CACATGCCAACATACAGCCA+TGG + chr2_2:30396567-30396586 None:intergenic 50.0%
! AAAGCAGAAGCATGGCTTCC+AGG + chr2_2:30396950-30396969 None:intergenic 50.0%
!! GCACTTGCCTGATTTGTTCG+AGG - chr2_2:30396988-30397007 Msa0247760:CDS 50.0%
TATCGCACTGTTCAGCACTC+TGG - chr2_2:30397211-30397230 Msa0247760:CDS 50.0%
ATCGCACTGTTCAGCACTCT+GGG - chr2_2:30397212-30397231 Msa0247760:CDS 50.0%
ACCCACAATTGAACCCAGAG+TGG + chr2_2:30397267-30397286 None:intergenic 50.0%
CCATGCGTTAACCAATCGAC+AGG + chr2_2:30397319-30397338 None:intergenic 50.0%
! CCTGTCGATTGGTTAACGCA+TGG - chr2_2:30397316-30397335 Msa0247760:CDS 50.0%
!!! CCCGTTTTTTCTGACAGGCA+AGG - chr2_2:30397641-30397660 Msa0247760:intron 50.0%
ACAAGAGGTGGATGGAGACA+AGG - chr2_2:30398014-30398033 Msa0247760:intron 50.0%
CAAGAGGTGGATGGAGACAA+GGG - chr2_2:30398015-30398034 Msa0247760:intron 50.0%
ACTTTCATTCGGCGCGCTAA+GGG + chr2_2:30398130-30398149 None:intergenic 50.0%
TACTTTCATTCGGCGCGCTA+AGG + chr2_2:30398131-30398150 None:intergenic 50.0%
CCCTTTACCGTCCATTGTTC+AGG - chr2_2:30399228-30399247 Msa0247760:intron 50.0%
ACTGGGATCTTGAGCTTCGA+TGG + chr2_2:30399508-30399527 None:intergenic 50.0%
! CGCAATGAGCTTAGCTCTTC+GGG + chr2_2:30399729-30399748 None:intergenic 50.0%
! GCGCAATGAGCTTAGCTCTT+CGG + chr2_2:30399730-30399749 None:intergenic 50.0%
! CTGACGCACAATGTTCTGAG+TGG - chr2_2:30399763-30399782 Msa0247760:intron 50.0%
! GGATTTTGCTACCGTGCTGG+CGG + chr2_2:30393023-30393042 None:intergenic 55.0%
TTCAGGGAGCTGTTGGCACT+TGG + chr2_2:30393044-30393063 None:intergenic 55.0%
TCGCTTAACCCGAAAGGGTC+TGG + chr2_2:30393147-30393166 None:intergenic 55.0%
ATGGGCCGACATGCTTCAGA+TGG + chr2_2:30395617-30395636 None:intergenic 55.0%
TGCCGTAAGGTTCAGCTAGG+GGG + chr2_2:30395817-30395836 None:intergenic 55.0%
! GATCGTCCCTCCAGCTTGTT+GGG - chr2_2:30395844-30395863 Msa0247760:CDS 55.0%
GTGGAACCCAACAAGCTGGA+GGG + chr2_2:30395853-30395872 None:intergenic 55.0%
CAAGGTGGAACCCAACAAGC+TGG + chr2_2:30395857-30395876 None:intergenic 55.0%
CCCTCCGAGGAGGAAATTGA+AGG - chr2_2:30396223-30396242 Msa0247760:CDS 55.0%
GCGGATAGTTGAGCAGCCAA+CGG - chr2_2:30396255-30396274 Msa0247760:CDS 55.0%
GCAGCCAACGGATGAAGTTG+AGG - chr2_2:30396267-30396286 Msa0247760:CDS 55.0%
! GGTGTACTATGGAGCGGACT+TGG - chr2_2:30396383-30396402 Msa0247760:intron 55.0%
GTACAGAACCTGGTAGTCGC+GGG + chr2_2:30396506-30396525 None:intergenic 55.0%
TCGCACTGTTCAGCACTCTG+GGG - chr2_2:30397213-30397232 Msa0247760:CDS 55.0%
CTTCGGAATGGTTTCTGCCG+AGG - chr2_2:30397969-30397988 Msa0247760:intron 55.0%
AAACTGGTTGTGCGGGAACC+AGG - chr2_2:30398046-30398065 Msa0247760:intron 55.0%
AACTGGTTGTGCGGGAACCA+GGG - chr2_2:30398047-30398066 Msa0247760:intron 55.0%
GAATGGATCGACCGCCAGCA+CGG - chr2_2:30393009-30393028 Msa0247760:three_prime_UTR 60.0%
CGCCCCCTAGCTGAACCTTA+CGG - chr2_2:30395812-30395831 Msa0247760:CDS 60.0%
GGATCGTCCCTCCAGCTTGT+TGG - chr2_2:30395843-30395862 Msa0247760:CDS 60.0%
GGTGGAACCCAACAAGCTGG+AGG + chr2_2:30395854-30395873 None:intergenic 60.0%
!! AGGGCTCCCTTCGGTTTTGG+AGG + chr2_2:30396207-30396226 None:intergenic 60.0%
!! TTTCCGAGGGGGTACCACTC+TGG - chr2_2:30397250-30397269 Msa0247760:CDS 60.0%
!! TTCCGAGGGGGTACCACTCT+GGG - chr2_2:30397251-30397270 Msa0247760:CDS 60.0%
AACCCAGAGTGGTACCCCCT+CGG + chr2_2:30397256-30397275 None:intergenic 60.0%
TCGGCGCGCTAAGGGTTACA+AGG + chr2_2:30398122-30398141 None:intergenic 60.0%
! CGGAGGGCTCCCTTCGGTTT+TGG + chr2_2:30396210-30396229 None:intergenic 65.0%
AAACCGAAGGGAGCCCTCCG+AGG - chr2_2:30396210-30396229 Msa0247760:CDS 65.0%
GGTTTCTGCCGAGGCCAGTG+AGG - chr2_2:30397978-30397997 Msa0247760:intron 65.0%
CCTCCTCGGAGGGCTCCCTT+CGG + chr2_2:30396216-30396235 None:intergenic 70.0%
CCGAAGGGAGCCCTCCGAGG+AGG - chr2_2:30396213-30396232 Msa0247760:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 30393004 30400202 30393004 ID=Msa0247760;Name=Msa0247760
chr2_2 mRNA 30393004 30400202 30393004 ID=Msa0247760-mRNA-1;Parent=Msa0247760;Name=Msa0247760-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.9|0.90|0.90|1|1|11|369|1026
chr2_2 exon 30393004 30393702 30393004 ID=Msa0247760-mRNA-1:exon:10705;Parent=Msa0247760-mRNA-1
chr2_2 exon 30393957 30394154 30393957 ID=Msa0247760-mRNA-1:exon:10704;Parent=Msa0247760-mRNA-1
chr2_2 exon 30394413 30394516 30394413 ID=Msa0247760-mRNA-1:exon:10703;Parent=Msa0247760-mRNA-1
chr2_2 exon 30394615 30395548 30394615 ID=Msa0247760-mRNA-1:exon:10702;Parent=Msa0247760-mRNA-1
chr2_2 exon 30395675 30396043 30395675 ID=Msa0247760-mRNA-1:exon:10701;Parent=Msa0247760-mRNA-1
chr2_2 exon 30396170 30396331 30396170 ID=Msa0247760-mRNA-1:exon:10700;Parent=Msa0247760-mRNA-1
chr2_2 exon 30396601 30396822 30396601 ID=Msa0247760-mRNA-1:exon:10699;Parent=Msa0247760-mRNA-1
chr2_2 exon 30396918 30397430 30396918 ID=Msa0247760-mRNA-1:exon:10698;Parent=Msa0247760-mRNA-1
chr2_2 exon 30397533 30397610 30397533 ID=Msa0247760-mRNA-1:exon:10697;Parent=Msa0247760-mRNA-1
chr2_2 exon 30397843 30397914 30397843 ID=Msa0247760-mRNA-1:exon:10696;Parent=Msa0247760-mRNA-1
chr2_2 exon 30400104 30400202 30400104 ID=Msa0247760-mRNA-1:exon:10695;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30400104 30400202 30400104 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30397843 30397914 30397843 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30397533 30397610 30397533 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30396918 30397430 30396918 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30396601 30396822 30396601 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30396170 30396331 30396170 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30395675 30396043 30395675 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30394615 30395548 30394615 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30394413 30394516 30394413 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30393957 30394154 30393957 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 CDS 30393373 30393702 30393373 ID=Msa0247760-mRNA-1:cds;Parent=Msa0247760-mRNA-1
chr2_2 three_prime_UTR 30393004 30393372 30393004 ID=Msa0247760-mRNA-1:three_prime_utr;Parent=Msa0247760-mRNA-1
Gene Sequence

>Msa0247760

ATGGCGAATGGATCGACCGCCAGCACGGTAGCAAAATCCAAGTGCCAACAGCTCCCTGAAAAAACAGCAAGCATAAAAGCTCTTTCGAGCAAACAACGCGATAGTCCTCTTCGGCACAAACCTAAAAAGGACAATGCACCTGAGTCTCCTGAAAGTCTTAGAAGTAAAAAGATATCAGCTAGATGGGATCCATCTGAAGCATGTCGGCCCATAATTGATGAAGCACCTGTTTTTCATCCAACTATTGAAGAGTTTGAAGATACATTGAGTTACATAGCGAAGATACGCCCCCTAGCTGAACCTTACGGCATATGTAGGATCGTCCCTCCAGCTTGTTGGGTTCCACCTTGCCTTCTTAAGGACAAAGATATCTGGGAAAATGCTGAATTTTCCACCCGTATTCAGCAAATTGATTTACTTCAAAATAGAGAACCTATGAAGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAGGAACTCCAAATCAGGAACATGTAGGAGAAATTCCAAGTCAGCTTCTGAAGCTAATAACGCTTCTGAAGCTGATGAGAAATACGGATTTCAAGCAGGGTCCGACTTCACGTTTAAAGACTTTCAGCAATATGCTAGCCACTTTAAGGAATGCTACTTTGGGTTGAAAGATGCAAATGAAGATGGAAAAGTCAATGATAGTAACCTCCAAAACCGAAGGGAGCCCTCCGAGGAGGAAATTGAAGGTGAATACTGGCGGATAGTTGAGCAGCCAACGGATGAAGTTGAGGTGTACTATGGAGCGGACTTGGAAACTGGAGTATTTGGAAGTGGTTTTTCTAAGGCATCATCCATACCTAAGGGTTATCCGGATCAGTATGCACTTTCTGGTTGGAATCTAAATAACTTCCCGCGACTACCAGGTTCTGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTACTAGTTCCATGGCTGTATGTTGGCATGTGCTTTTCATCGTTTTGTTGGCATGTTGAGGATCATCACCTCTATTCGCTTAATTATCTACACTTTGGTGACTCAAAGATATGGTATGGAGTACCTGGAAGCCATGCTTCTGCTTTAGAAGGTGCAATGAAGAAGCACTTGCCTGATTTGTTCGAGGAAGTACCAAATCTACTCAATGATCTGGTTACTCAGTTATCTCCATCAATTCTTAAAGATGAGGGAGTGCCCGTATATCGCACTGTTCAGCACTCTGGGGAATTTGTCATTACTTTTCCGAGGGGGTACCACTCTGGGTTCAATTGTGGGTTCAACTGTGCAGAAGCAGTGAATGTTGCTCCTGTCGATTGGTTAACGCATGGCCTAAATGCCGTTGAGCTTTACAGTTTACAACGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCATCGCTGGAAGCTATACGAGCCCTTGCAGAGCTAACTCTTCATGGAAAGGAAAGTTCAAAAAATTTGAAATGGAGAAGCTACTGTGGGAAAGATGGAGTTCTTACCAAGGCATTTAAGGCAAGGATAAAGATGGAAGAAGAGAGGCTAAACTGTCTTCCAACTCATTTTAAGTCGCTGAAGATGGGCAACGACTTTGACTTGCATACAGAACGAGAATGCTTTTCTTGCTTCTATGACTTGTATCTATCTGCTGTCGGTTGCGAGTGCTCTCCTGATAAATATTCTTGTCTTAAGCATGCTTGTTTGTTCTGCTCATGCGAAATGGACAAAAGATTTGTTCTGCTTCGATATAATATGAATGAGCTAAACAAATTGCTTGAAGCACTAGAAGGAGATTCACTTGCTCTTGAGTTATGGGAAAGTAAAAACTTCGGAATGGTTTCTGCCGAGGCCAGTGAGGTTTGCATGAATAAACAAGAGGTGGATGGAGACAAGGGTCATGAAGAAACTGGTTGTGCGGGAACCAGGGATAAGTCAAATAGTCATGCTACATCAGAGCTAATGCAGTGTGAATCTCACCTTGTAACCCTTAGCGCGCCGAATGAAAGTATAGATAGTGATAATGACAATATGATAGTCATAGACAAAGATAAGGCGGATATTGCAGATAGCCATAACAAGGGTGATTCAGTAGAGGAAAAAGCATGTTGTTCAGAGACAAAAAAGGAACAAGACAACATGGAACTTGTTGTTGACCTATCACCTTCATCTTCTGTTGTGAAGACAGAAGTTTCATCATGCTCTAGGAATGTTCACAATTCTTGTACATTTGATGGTGGAAAACTTGAGGTGCATCTGCAAATGGATTCAGATTCAAGAAAGAAACCCAAAATTGTAGTTGAAAAAGTCACTGACACCACGAATGCGAGTATATCTTTGACACAAGAAAGCTTTCTAATGCAAATTTTTAGTACTTCTGTCAAGCCTATAAGTTTGGGATCTGTTGTTCATGGGAAGCTATGGTGCAATAAGCATGCAATATATCCAAAAGGATTCAAGAGCCGAGTTAATTTCTTTAGCATCATCGATCCAACAAGAATCTGTAGCTATGTTTCTGAAGTAATTGATGCTGGACTTCTAGGACCTCTTTTCAAGGTTACAATGGAGGAATGTCCAAGTGTCACTTTCACGGAAACCTCAGCAGATAAGTGTTGGGAATCAGTTCTTAAGAGACTACGTGACAAAATCACAGAGCAAAGGAGTCTAGGTGAACATGAACTTCCTTCCTTAGAGCTTCTGAAAAGCATTAACGGTTTTAGAATGTTCGGCTTCCCTTTACCGTCCATTGTTCAGGCCATCGAAGCTCAAGATCCCAGTCATCAGTGTGCAGAGTATTGGAATCACAAAGGTTTCCCTACATCTCCAGGAAGTGTCATCGATAACTGTAAAGTCCTATGTTGTTCAAGTAGCCCTACCAAAGTTTTTGGTATTAATTTGACTGATCAGGCGAAAGACAACATAGAAGGAAGTTTTTATTCTCTTGAAGAGATGAAATCAATACTACAAAAGGCAAGTCCCGAAGAGCTAAGCTCATTGCGCAAGTTTCTCATGTCTGACGCACAATGTTCTGAGTGGAGAATGACATTAACATCATTGATCGTTGAGATTCAGAAAGCTTTGTAG
Protein sequence

>Msa0247760

MANGSTASTVAKSKCQQLPEKTASIKALSSKQRDSPLRHKPKKDNAPESPESLRSKKISARWDPSEACRPIIDEAPVFHPTIEEFEDTLSYIAKIRPLAEPYGICRIVPPACWVPPCLLKDKDIWENAEFSTRIQQIDLLQNREPMKKKSRGRKRKRRRNSKSGTCRRNSKSASEANNASEADEKYGFQAGSDFTFKDFQQYASHFKECYFGLKDANEDGKVNDSNLQNRREPSEEEIEGEYWRIVEQPTDEVEVYYGADLETGVFGSGFSKASSIPKGYPDQYALSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDSKIWYGVPGSHASALEGAMKKHLPDLFEEVPNLLNDLVTQLSPSILKDEGVPVYRTVQHSGEFVITFPRGYHSGFNCGFNCAEAVNVAPVDWLTHGLNAVELYSLQRRKTSLSHDKLLFGSSLEAIRALAELTLHGKESSKNLKWRSYCGKDGVLTKAFKARIKMEEERLNCLPTHFKSLKMGNDFDLHTERECFSCFYDLYLSAVGCECSPDKYSCLKHACLFCSCEMDKRFVLLRYNMNELNKLLEALEGDSLALELWESKNFGMVSAEASEVCMNKQEVDGDKGHEETGCAGTRDKSNSHATSELMQCESHLVTLSAPNESIDSDNDNMIVIDKDKADIADSHNKGDSVEEKACCSETKKEQDNMELVVDLSPSSSVVKTEVSSCSRNVHNSCTFDGGKLEVHLQMDSDSRKKPKIVVEKVTDTTNASISLTQESFLMQIFSTSVKPISLGSVVHGKLWCNKHAIYPKGFKSRVNFFSIIDPTRICSYVSEVIDAGLLGPLFKVTMEECPSVTFTETSADKCWESVLKRLRDKITEQRSLGEHELPSLELLKSINGFRMFGFPLPSIVQAIEAQDPSHQCAEYWNHKGFPTSPGSVIDNCKVLCCSSSPTKVFGINLTDQAKDNIEGSFYSLEEMKSILQKASPEELSSLRKFLMSDAQCSEWRMTLTSLIVEIQKAL*