AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0252830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0252830 MtrunA17_Chr2g0311651 92.628 312 22 1 1 311 1 312 0.0 609
Msa0252830 MtrunA17_Chr2g0311661 80.449 312 39 4 1 311 1 291 0.0 514
Msa0252830 MtrunA17_Chr5g0442771 52.041 294 130 7 18 307 14 300 1.65e-94 282
Msa0252830 MtrunA17_Chr5g0417001 52.066 242 96 8 19 249 11 243 5.14e-75 235
Msa0252830 MtrunA17_Chr8g0361731 58.919 185 68 5 20 201 12 191 1.02e-72 229
Msa0252830 MtrunA17_Chr6g0453131 59.412 170 51 4 23 186 16 173 6.46e-67 214
Msa0252830 MtrunA17_Chr4g0076731 50.888 169 66 4 18 186 50 201 1.04e-50 173
Msa0252830 MtrunA17_Chr5g0398971 43.192 213 96 6 21 225 7 202 1.33e-50 171
Msa0252830 MtrunA17_Chr8g0384721 42.105 228 116 7 24 251 9 220 9.29e-50 167
Msa0252830 MtrunA17_Chr2g0318101 46.512 172 81 4 24 191 17 181 1.19e-49 168
Msa0252830 MtrunA17_Chr7g0252971 47.929 169 75 5 24 187 10 170 1.54e-49 167
Msa0252830 MtrunA17_Chr3g0124761 49.730 185 76 6 24 208 9 176 3.92e-49 165
Msa0252830 MtrunA17_Chr2g0318081 50.289 173 70 4 24 196 18 174 5.03e-49 167
Msa0252830 MtrunA17_Chr8g0359921 52.299 174 63 6 24 194 16 172 9.07e-49 165
Msa0252830 MtrunA17_Chr5g0417791 50.000 164 68 4 24 186 5 155 4.38e-48 161
Msa0252830 MtrunA17_Chr4g0047841 46.316 190 83 6 24 201 17 199 4.65e-48 164
Msa0252830 MtrunA17_Chr4g0018391 46.199 171 72 4 21 189 7 159 5.72e-48 164
Msa0252830 MtrunA17_Chr4g0056541 46.448 183 76 6 21 199 7 171 8.94e-48 164
Msa0252830 MtrunA17_Chr4g0042561 49.091 165 68 4 24 186 11 161 1.37e-47 160
Msa0252830 MtrunA17_Chr2g0309891 46.988 166 73 4 24 188 8 159 1.69e-46 160
Msa0252830 MtrunA17_Chr7g0263931 41.837 196 103 4 24 219 13 197 2.33e-46 159
Msa0252830 MtrunA17_Chr3g0091921 45.455 187 84 5 9 192 1 172 4.19e-46 157
Msa0252830 MtrunA17_Chr6g0453451 37.175 269 144 10 16 278 15 264 8.58e-46 157
Msa0252830 MtrunA17_Chr6g0481091 46.061 165 73 3 24 187 8 157 1.09e-45 155
Msa0252830 MtrunA17_Chr3g0130731 40.826 218 114 7 24 240 9 212 1.29e-45 156
Msa0252830 MtrunA17_Chr8g0346001 44.828 174 87 4 15 186 9 175 1.63e-45 159
Msa0252830 MtrunA17_Chr5g0405211 40.887 203 100 4 18 218 5 189 2.54e-45 157
Msa0252830 MtrunA17_Chr2g0326361 45.087 173 84 5 24 196 16 177 3.09e-45 156
Msa0252830 MtrunA17_Chr4g0060931 44.944 178 81 5 16 192 12 173 3.89e-45 157
Msa0252830 MtrunA17_Chr3g0109821 49.091 165 69 4 24 187 8 158 4.77e-45 162
Msa0252830 MtrunA17_Chr6g0461661 45.856 181 83 4 10 187 3 171 5.33e-45 157
Msa0252830 MtrunA17_Chr7g0253011 46.328 177 84 4 16 192 12 177 6.73e-45 157
Msa0252830 MtrunA17_Chr2g0309331 36.508 252 123 8 18 263 7 227 3.38e-44 154
Msa0252830 MtrunA17_Chr7g0214071 46.471 170 72 4 24 193 17 167 4.12e-44 151
Msa0252830 MtrunA17_Chr8g0372121 44.828 174 76 4 18 189 3 158 6.31e-44 152
Msa0252830 MtrunA17_Chr5g0433781 46.988 166 72 4 24 188 8 158 1.15e-43 158
Msa0252830 MtrunA17_Chr6g0484441 42.614 176 80 5 18 192 2 157 2.03e-42 149
Msa0252830 MtrunA17_Chr1g0200561 43.678 174 78 4 15 186 13 168 4.28e-42 148
Msa0252830 MtrunA17_Chr7g0217721 34.226 336 172 12 1 302 1 321 6.74e-42 148
Msa0252830 MtrunA17_Chr8g0385991 45.783 166 79 4 24 189 16 170 1.41e-41 144
Msa0252830 MtrunA17_Chr4g0038751 41.361 191 87 4 1 191 1 166 6.99e-41 144
Msa0252830 MtrunA17_Chr5g0400461 42.857 168 78 3 24 187 8 161 8.56e-41 145
Msa0252830 MtrunA17_Chr2g0312321 46.951 164 70 5 24 187 13 159 1.66e-40 143
Msa0252830 MtrunA17_Chr4g0054791 38.095 210 107 6 24 232 8 195 1.74e-40 143
Msa0252830 MtrunA17_Chr1g0197361 44.767 172 77 4 24 193 10 165 2.02e-40 148
Msa0252830 MtrunA17_Chr3g0139331 44.318 176 79 5 18 192 8 165 2.55e-40 144
Msa0252830 MtrunA17_Chr2g0316971 45.455 165 76 5 24 187 25 176 5.60e-40 144
Msa0252830 MtrunA17_Chr4g0017921 35.169 236 94 6 21 254 8 186 1.84e-39 142
Msa0252830 MtrunA17_Chr1g0147421 40.741 189 94 5 5 192 11 182 4.38e-39 140
Msa0252830 MtrunA17_Chr3g0131911 37.850 214 107 4 13 226 6 193 4.60e-39 137
Msa0252830 MtrunA17_Chr3g0092671 45.349 172 76 5 24 193 7 162 1.13e-38 143
Msa0252830 MtrunA17_Chr1g0183741 37.054 224 109 8 24 242 12 208 5.07e-38 135
Msa0252830 MtrunA17_Chr1g0201021 41.279 172 85 4 23 193 20 176 9.29e-38 141
Msa0252830 MtrunA17_Chr3g0130101 39.665 179 92 3 18 195 3 166 1.23e-37 137
Msa0252830 MtrunA17_Chr7g0217711 44.848 165 77 4 1 162 1 154 1.67e-37 131
Msa0252830 MtrunA17_Chr8g0364791 40.805 174 87 3 23 195 7 165 2.46e-37 138
Msa0252830 MtrunA17_Chr5g0428991 42.614 176 84 5 12 186 16 175 4.00e-37 139
Msa0252830 MtrunA17_Chr1g0197351 43.636 165 83 3 24 187 44 199 4.82e-37 137
Msa0252830 MtrunA17_Chr3g0128151 40.884 181 90 5 8 187 9 173 1.16e-36 138
Msa0252830 MtrunA17_Chr3g0144271 41.765 170 94 4 1 169 3 168 1.88e-36 135
Msa0252830 MtrunA17_Chr8g0384201 39.655 174 89 3 23 195 7 165 2.30e-36 136
Msa0252830 MtrunA17_Chr7g0261411 40.994 161 77 3 24 184 12 154 2.24e-34 127
Msa0252830 MtrunA17_Chr3g0128111 40.244 164 82 3 25 187 45 193 2.78e-34 125
Msa0252830 MtrunA17_Chr8g0345671 46.617 133 65 5 20 150 10 138 1.94e-32 124
Msa0252830 MtrunA17_Chr4g0026141 41.053 190 93 8 20 204 3 178 5.36e-31 117
Msa0252830 MtrunA17_Chr8g0345691 39.157 166 79 6 21 184 12 157 3.85e-29 115
Msa0252830 MtrunA17_Chr2g0321631 36.813 182 97 6 24 200 6 174 8.94e-28 108
Msa0252830 MtrunA17_Chr8g0345711 43.511 131 68 5 23 150 12 139 4.23e-27 104
Msa0252830 MtrunA17_Chr7g0266701 35.260 173 98 6 24 191 6 169 7.07e-27 106
Msa0252830 MtrunA17_Chr2g0321741 37.778 135 73 3 42 169 12 142 4.89e-25 103
Msa0252830 MtrunA17_Chr4g0050701 31.707 164 96 4 24 187 13 160 6.79e-25 99.0
Msa0252830 MtrunA17_Chr3g0113001 42.623 122 57 3 75 195 17 126 3.34e-24 99.8
Msa0252830 MtrunA17_Chr8g0345721 36.306 157 66 4 25 150 38 191 3.10e-23 95.1
Msa0252830 MtrunA17_Chr8g0345731 35.135 148 89 5 23 165 24 169 3.59e-23 94.0
Msa0252830 MtrunA17_Chr8g0345741 40.000 120 67 4 33 150 2 118 1.10e-20 86.7
Msa0252830 MtrunA17_Chr3g0113031 42.056 107 50 3 87 192 4 99 2.82e-19 85.9
Msa0252830 MtrunA17_Chr7g0243371 50.000 80 38 1 76 155 17 94 5.96e-19 80.9
Msa0252830 MtrunA17_Chr7g0251651 34.839 155 82 7 1 150 1 141 6.85e-19 83.2
Msa0252830 MtrunA17_Chr8g0345701 37.179 156 75 9 18 155 2 152 2.35e-18 81.3
Msa0252830 MtrunA17_Chr7g0251671 33.813 139 82 6 14 150 3 133 1.90e-17 78.2
Msa0252830 MtrunA17_Chr8g0384351 30.675 163 77 7 24 186 12 138 2.00e-17 79.0
Msa0252830 MtrunA17_Chr7g0251661 34.783 138 82 5 14 150 3 133 2.21e-17 77.8
Msa0252830 MtrunA17_Chr3g0130321 29.545 176 100 7 24 194 9 165 1.49e-15 74.3
Msa0252830 MtrunA17_Chr1g0194791 65.957 47 15 1 24 69 48 94 2.56e-15 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0252830 AT2G43000.1 52.577 291 103 12 16 303 12 270 1.34e-86 261
Msa0252830 AT3G12910.1 47.195 303 138 9 10 305 9 296 3.11e-82 251
Msa0252830 AT5G39820.1 57.292 192 59 5 14 186 4 191 5.96e-69 218
Msa0252830 AT1G26870.1 44.828 290 123 8 20 306 14 269 4.52e-68 218
Msa0252830 AT3G04070.2 43.644 236 111 10 16 250 5 219 3.91e-55 182
Msa0252830 AT3G04070.1 42.339 248 113 10 16 250 5 235 4.02e-55 183
Msa0252830 AT1G61110.1 46.939 196 88 5 8 197 3 188 4.22e-52 174
Msa0252830 AT2G02450.1 51.829 164 62 4 23 186 52 198 3.39e-51 173
Msa0252830 AT2G02450.2 51.829 164 62 4 23 186 52 198 4.44e-51 174
Msa0252830 AT1G69490.1 50.581 172 72 5 15 186 3 161 4.95e-51 170
Msa0252830 AT1G01720.1 40.541 259 129 8 24 279 9 245 4.55e-50 168
Msa0252830 AT5G08790.1 46.078 204 89 8 25 227 10 193 1.00e-49 167
Msa0252830 AT5G07680.1 36.364 275 157 6 16 289 12 269 1.35e-49 168
Msa0252830 AT5G07680.2 36.531 271 154 6 20 289 2 255 1.08e-48 165
Msa0252830 AT1G12260.2 37.405 262 132 6 21 270 7 248 1.88e-48 165
Msa0252830 AT3G15510.1 47.647 170 78 4 26 191 21 183 1.91e-48 166
Msa0252830 AT1G12260.1 46.067 178 76 4 21 196 7 166 3.78e-48 166
Msa0252830 AT1G52890.1 49.714 175 68 4 24 196 16 172 7.15e-48 163
Msa0252830 AT3G15500.1 50.292 171 65 4 24 192 16 168 8.39e-48 163
Msa0252830 AT4G27410.2 48.864 176 73 5 24 198 16 175 1.01e-47 162
Msa0252830 AT2G43000.2 47.748 222 82 11 85 303 2 192 1.34e-47 159
Msa0252830 AT5G61430.1 46.328 177 80 4 16 192 11 172 1.85e-47 162
Msa0252830 AT5G63790.2 43.814 194 95 6 25 218 63 242 6.00e-47 160
Msa0252830 AT5G63790.1 43.814 194 95 6 25 218 53 232 6.63e-47 160
Msa0252830 AT5G13180.1 41.743 218 106 4 9 226 1 197 3.43e-46 157
Msa0252830 AT5G39610.1 37.849 251 135 7 14 261 11 243 4.17e-46 157
Msa0252830 AT5G62380.2 45.833 168 72 4 24 189 9 159 6.08e-46 159
Msa0252830 AT5G62380.1 45.833 168 72 4 24 189 9 159 6.08e-46 159
Msa0252830 AT4G36160.2 45.977 174 74 4 15 186 8 163 7.72e-46 159
Msa0252830 AT4G36160.1 45.977 174 74 4 15 186 4 159 7.78e-46 159
Msa0252830 AT4G36160.3 45.977 174 74 4 15 186 4 159 7.78e-46 159
Msa0252830 AT1G77450.1 47.429 175 78 5 24 198 12 172 9.64e-46 155
Msa0252830 AT1G65910.1 47.368 171 72 4 24 192 8 162 1.23e-45 164
Msa0252830 AT3G17730.1 41.624 197 92 4 24 219 8 182 1.91e-45 154
Msa0252830 AT2G46770.1 43.750 176 90 4 15 186 10 180 2.25e-45 158
Msa0252830 AT3G12977.1 38.655 238 111 8 18 255 15 217 4.61e-45 154
Msa0252830 AT1G62700.1 45.087 173 75 4 19 189 5 159 7.08e-45 157
Msa0252830 AT1G62700.2 45.087 173 75 4 19 189 5 159 7.08e-45 157
Msa0252830 AT3G61910.1 35.409 257 149 7 15 261 5 254 8.31e-45 155
Msa0252830 AT4G27410.3 45.312 192 73 6 24 198 16 192 9.08e-45 155
Msa0252830 AT1G71930.2 37.450 251 122 8 24 263 11 237 9.27e-45 155
Msa0252830 AT1G71930.1 37.450 251 122 8 24 263 11 237 9.27e-45 155
Msa0252830 AT2G18060.3 46.023 176 74 5 21 193 9 166 9.47e-45 156
Msa0252830 AT2G18060.1 46.023 176 74 5 21 193 9 166 9.47e-45 156
Msa0252830 AT3G03200.1 43.386 189 86 5 24 211 8 176 1.82e-44 158
Msa0252830 AT5G18270.1 47.929 169 72 5 20 187 20 173 1.94e-44 154
Msa0252830 AT5G17260.1 44.706 170 79 4 24 192 8 163 4.45e-44 157
Msa0252830 AT5G18270.2 47.337 169 73 5 20 187 20 173 6.92e-44 153
Msa0252830 AT1G52880.1 51.220 164 76 3 26 189 21 180 7.02e-44 152
Msa0252830 AT2G33480.1 47.590 166 68 4 24 189 17 163 9.70e-44 151
Msa0252830 AT2G17040.1 44.186 172 78 3 20 191 4 157 9.98e-44 151
Msa0252830 AT3G04060.1 48.235 170 72 5 20 188 19 173 1.12e-43 152
Msa0252830 AT5G66300.1 37.288 236 115 7 24 242 14 233 1.41e-43 151
Msa0252830 AT3G18400.1 45.143 175 78 5 18 192 2 158 2.08e-43 151
Msa0252830 AT2G33480.2 47.590 166 66 4 24 189 17 161 2.09e-43 150
Msa0252830 AT1G76420.1 43.407 182 84 6 17 197 18 181 2.43e-43 152
Msa0252830 AT1G32510.1 42.077 183 92 4 24 202 8 180 2.55e-43 150
Msa0252830 AT1G54330.1 45.783 166 71 3 24 188 8 155 5.28e-43 150
Msa0252830 AT3G29035.1 49.682 157 71 4 15 169 16 166 2.43e-42 149
Msa0252830 AT3G10500.1 45.614 171 77 4 24 193 11 166 3.33e-42 153
Msa0252830 AT2G24430.2 44.633 177 80 6 17 192 12 171 9.45e-42 147
Msa0252830 AT2G24430.1 44.633 177 80 6 17 192 12 171 9.45e-42 147
Msa0252830 AT4G17980.1 44.848 165 79 4 24 187 8 161 2.39e-41 144
Msa0252830 AT5G46590.2 50.000 130 61 2 24 152 8 134 2.65e-41 145
Msa0252830 AT5G46590.1 50.000 130 61 2 24 152 8 134 4.40e-41 144
Msa0252830 AT4G17980.2 44.848 165 79 4 24 187 8 161 4.54e-41 144
Msa0252830 AT1G79580.3 42.424 165 76 4 24 186 19 166 7.72e-41 146
Msa0252830 AT1G79580.5 42.424 165 76 4 24 186 19 166 7.72e-41 146
Msa0252830 AT1G79580.4 42.424 165 76 4 24 186 19 166 7.72e-41 146
Msa0252830 AT1G79580.2 42.424 165 76 4 24 186 19 166 7.72e-41 146
Msa0252830 AT1G79580.1 42.424 165 76 4 24 186 19 166 7.72e-41 146
Msa0252830 AT3G15170.1 43.646 181 87 6 16 194 15 182 9.13e-41 144
Msa0252830 AT5G04410.1 44.444 171 79 3 24 193 11 166 1.45e-40 149
Msa0252830 AT1G56010.2 41.206 199 99 6 3 197 1 185 2.59e-40 143
Msa0252830 AT1G32770.1 40.761 184 91 6 15 191 10 182 3.19e-40 144
Msa0252830 AT3G10480.1 43.636 165 78 4 24 187 29 179 9.16e-40 145
Msa0252830 AT3G10480.2 43.636 165 77 4 24 187 29 178 9.58e-40 145
Msa0252830 AT4G10350.1 39.899 198 87 6 21 216 9 176 1.25e-39 142
Msa0252830 AT2G27300.1 40.940 149 84 1 23 171 15 159 2.94e-38 138
Msa0252830 AT1G34190.1 42.105 171 83 4 24 193 18 173 4.02e-38 142
Msa0252830 AT1G33280.1 41.818 165 76 3 24 186 10 156 6.06e-38 137
Msa0252830 AT3G10490.1 41.818 165 81 5 24 187 29 179 9.17e-38 134
Msa0252830 AT1G34180.3 41.520 171 84 4 24 193 18 173 3.34e-37 138
Msa0252830 AT5G09330.5 38.728 173 90 3 24 195 8 165 4.20e-37 138
Msa0252830 AT5G09330.2 38.728 173 90 3 24 195 8 165 4.20e-37 138
Msa0252830 AT5G09330.4 38.728 173 90 3 24 195 8 165 4.20e-37 138
Msa0252830 AT5G09330.3 38.728 173 90 3 24 195 8 165 4.20e-37 138
Msa0252830 AT5G09330.1 38.728 173 90 3 24 195 8 165 4.20e-37 138
Msa0252830 AT3G10490.2 41.566 166 80 5 24 187 29 179 4.49e-37 137
Msa0252830 AT5G53950.1 44.242 165 80 4 24 188 19 171 5.10e-37 136
Msa0252830 AT3G44290.2 42.188 128 70 1 23 150 15 138 1.12e-36 131
Msa0252830 AT1G34180.1 41.520 171 84 4 24 193 18 173 1.21e-36 138
Msa0252830 AT4G35580.3 51.515 132 58 3 21 151 9 135 1.41e-36 137
Msa0252830 AT4G35580.1 51.515 132 58 3 21 151 9 135 1.46e-36 137
Msa0252830 AT4G35580.2 51.515 132 58 3 21 151 9 135 1.56e-36 137
Msa0252830 AT5G22290.1 42.105 133 73 1 18 150 17 145 3.44e-36 133
Msa0252830 AT3G44290.1 42.188 128 70 1 23 150 15 138 7.38e-36 132
Msa0252830 AT1G33060.2 45.833 144 72 3 9 151 12 150 9.50e-36 136
Msa0252830 AT1G33060.1 45.833 144 72 3 9 151 12 150 1.03e-35 136
Msa0252830 AT5G64060.1 39.394 165 84 3 24 187 8 157 1.83e-35 131
Msa0252830 AT1G34180.4 38.798 183 84 4 24 193 18 185 2.25e-35 133
Msa0252830 AT1G34180.2 38.798 183 84 4 24 193 18 185 8.09e-35 133
Msa0252830 AT3G10480.3 36.364 198 78 4 24 187 29 212 1.64e-34 132
Msa0252830 AT5G24590.2 41.916 167 79 5 23 186 13 164 1.42e-33 128
Msa0252830 AT3G49530.2 40.361 166 83 5 23 186 13 164 1.96e-33 127
Msa0252830 AT3G49530.1 40.361 166 83 5 23 186 13 164 8.93e-33 126
Msa0252830 AT5G04395.1 40.000 150 76 3 18 155 25 172 2.79e-31 116
Msa0252830 AT4G28530.1 40.884 181 69 6 24 186 12 172 3.28e-31 120
Msa0252830 AT3G12977.2 38.710 186 79 7 70 255 14 164 5.60e-30 114
Msa0252830 AT5G61430.2 47.458 118 49 2 75 192 5 109 2.31e-29 113
Msa0252830 AT5G64530.1 33.898 177 91 6 24 193 5 162 1.61e-28 108
Msa0252830 AT5G22380.1 29.661 236 139 6 25 247 8 229 4.35e-28 109
Msa0252830 AT1G32870.2 46.324 136 66 3 18 152 6 135 2.61e-27 111
Msa0252830 AT1G32870.1 46.324 136 66 3 18 152 6 135 2.75e-27 111
Msa0252830 AT1G32870.3 46.324 136 66 3 18 152 42 171 4.14e-27 111
Msa0252830 AT5G64530.2 40.000 130 63 4 24 153 5 119 7.28e-26 100
Msa0252830 AT3G44350.2 32.245 245 136 11 25 262 8 229 2.26e-25 102
Msa0252830 AT1G56010.1 42.742 124 56 3 77 197 7 118 2.36e-24 99.8
Msa0252830 AT3G44350.1 40.602 133 68 4 25 151 8 135 4.55e-24 96.3
Msa0252830 AT4G01550.1 40.909 132 75 3 23 152 5 135 7.27e-24 101
Msa0252830 AT4G01540.4 42.105 133 73 4 23 152 5 136 2.89e-23 99.0
Msa0252830 AT4G01540.3 42.105 133 73 4 23 152 5 136 4.23e-23 99.0
Msa0252830 AT4G01540.2 42.105 133 73 4 23 152 5 136 4.79e-23 99.0
Msa0252830 AT4G01540.1 42.105 133 73 4 23 152 5 136 5.10e-23 99.4
Msa0252830 AT4G01520.1 40.458 131 74 4 25 152 7 136 5.77e-23 97.1
Msa0252830 AT2G33480.3 44.348 115 49 3 75 189 7 106 6.73e-23 94.7
Msa0252830 AT4G10350.2 38.298 141 58 4 76 216 18 129 9.22e-21 90.5
Msa0252830 AT1G02230.1 39.850 133 73 5 25 154 6 134 4.49e-20 89.7
Msa0252830 AT1G02250.1 40.310 129 70 5 25 150 6 130 1.18e-19 88.6
Msa0252830 AT3G04420.2 37.984 129 73 4 25 150 6 130 7.10e-19 85.5
Msa0252830 AT3G04420.1 37.984 129 73 4 25 150 6 130 2.04e-18 84.7
Msa0252830 AT5G14000.2 30.000 160 102 4 9 166 3 154 9.89e-18 79.3
Msa0252830 AT4G28530.2 42.991 107 42 3 24 113 12 116 2.71e-17 81.3
Msa0252830 AT5G14000.1 30.189 159 101 4 9 165 3 153 1.01e-16 77.8
Msa0252830 AT5G50820.1 35.556 135 72 5 24 155 19 141 2.27e-16 76.6
Msa0252830 AT2G18060.2 42.553 94 36 3 101 193 2 78 6.01e-16 77.0
Msa0252830 AT1G02220.1 36.434 129 72 5 25 150 6 127 1.11e-14 74.3
Msa0252830 AT1G01010.1 34.591 159 88 8 25 170 6 161 3.80e-14 72.8
Msa0252830 AT3G56530.1 30.882 136 88 2 24 157 54 185 5.18e-13 68.9
Msa0252830 AT3G10490.4 36.559 93 43 4 96 187 2 79 4.79e-12 66.2
Msa0252830 AT3G10490.3 36.559 93 43 4 96 187 2 79 4.79e-12 66.2

Find 47 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTATTATCATTTGATAAT+TGG 0.114896 2_2:+44440600 Msa0252830:CDS
TATATGACATGCAGGAAATT+TGG 0.158346 2_2:+44440249 Msa0252830:intron
CAACAAACATATATCAATTT+TGG 0.187147 2_2:+44440407 Msa0252830:CDS
GAGTCACTGGGTCTGGATTT+TGG 0.213679 2_2:+44439366 Msa0252830:CDS
AGCATAGGAAATGTTTGTTT+TGG 0.292918 2_2:-44439549 None:intergenic
GTTATTATCATTTGATAATT+GGG 0.315345 2_2:+44440601 Msa0252830:CDS
CCAGACCCAGTGACTCTATT+TGG 0.319659 2_2:-44439359 None:intergenic
GAAAATGATGTTCCACTTCC+TGG 0.355284 2_2:+44438430 Msa0252830:CDS
ATGCATCATCCAATCAGTTT+TGG 0.361511 2_2:-44439498 None:intergenic
GTTTGACGCTTGGTAACTAA+TGG 0.382903 2_2:-44440332 None:intergenic
CCAAATAGAGTCACTGGGTC+TGG 0.392963 2_2:+44439359 Msa0252830:CDS
TTGATGAGATCAATAGCAAT+AGG 0.399965 2_2:-44438520 None:intergenic
TTCATGAATGGTTTGACGCT+TGG 0.408706 2_2:-44440342 None:intergenic
TAGTAGAATGAATAGCAATA+TGG 0.412099 2_2:+44440370 Msa0252830:CDS
GCCAAAGAGGGAGAAAATAT+AGG 0.423088 2_2:+44439324 Msa0252830:CDS
CAATGTACCTGGAGCAGAAA+AGG 0.440217 2_2:+44439286 Msa0252830:CDS
ATATCTACAAATATGATCCT+TGG 0.441210 2_2:+44438551 Msa0252830:CDS
TTTGATAATTGGGATGAGCT+TGG 0.467447 2_2:+44440611 Msa0252830:CDS
GACAAAGCAATATACTCAAA+TGG 0.469362 2_2:+44439404 Msa0252830:CDS
GTTTACTACCGTGGTAGTGC+TGG 0.483590 2_2:+44439467 Msa0252830:CDS
TATCTACAAATATGATCCTT+GGG 0.485955 2_2:+44438552 Msa0252830:CDS
GTTAGACCAAATAGAGTCAC+TGG 0.491150 2_2:+44439353 Msa0252830:CDS
AGAATTACTATTTACAAACT+AGG 0.491310 2_2:-44440662 None:intergenic
GAAAAGGTACCAAAACTGAT+TGG 0.493324 2_2:+44439489 Msa0252830:CDS
TTGTATAATTATTGACTGGT+TGG 0.494049 2_2:-44440460 None:intergenic
TATGCAGAAGCCAATGTACC+TGG 0.508560 2_2:+44439275 Msa0252830:intron
TACCGTGGTAGTGCTGGAAA+AGG 0.520218 2_2:+44439473 Msa0252830:CDS
TGGAAACGAAATCCAGGAAG+TGG 0.529636 2_2:-44438442 None:intergenic
GTAACAAGTTCTTCATCTGT+AGG 0.530457 2_2:-44438466 None:intergenic
ATATACTCAAATGGAGGAGA+AGG 0.533042 2_2:+44439413 Msa0252830:CDS
CTGCTTGTATAATTATTGAC+TGG 0.539613 2_2:-44440464 None:intergenic
CAAGTTCTTCATCTGTAGGA+TGG 0.540071 2_2:-44438462 None:intergenic
TGCGTTACATTAATTTGTTG+AGG 0.558228 2_2:-44440542 None:intergenic
GTAGGATGGAAACGAAATCC+AGG 0.566609 2_2:-44438448 None:intergenic
GACATACTTGGAAGATCCCA+AGG 0.569277 2_2:-44438568 None:intergenic
ATTATACAAGCAGTGATCAA+AGG 0.571200 2_2:+44440474 Msa0252830:CDS
GGAGAAGGAAATGATTGTGT+TGG 0.583944 2_2:+44439428 Msa0252830:CDS
ATCAGCATCATTCTTAGCAT+AGG 0.603706 2_2:-44439564 None:intergenic
AAAACACTTGTTTACTACCG+TGG 0.605694 2_2:+44439458 Msa0252830:CDS
AGAGAAGATGGGTATGAACG+AGG 0.606606 2_2:+44438372 None:intergenic
AGATCAATTGAGCTCTTCAG+TGG 0.611925 2_2:+44440511 Msa0252830:CDS
TCAAAAGAAATGTATCACAA+AGG 0.638749 2_2:+44440288 Msa0252830:CDS
AAAGCAATATACTCAAATGG+AGG 0.648134 2_2:+44439407 Msa0252830:CDS
GTACCTGGAGCAGAAAAGGA+AGG 0.664754 2_2:+44439290 Msa0252830:CDS
TTAGACCAAATAGAGTCACT+GGG 0.677648 2_2:+44439354 Msa0252830:CDS
TATGAACGAGGATTTCAACA+TGG 0.688452 2_2:+44438384 Msa0252830:CDS
CTATGAGCATCATCACAATG+AGG 0.719660 2_2:+44440436 Msa0252830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATATATATATATT+TGG + chr2_2:44439109-44439128 Msa0252830:intron 0.0%
!! TTAAAAAATATATATATATT+TGG + chr2_2:44439109-44439128 Msa0252830:intron 0.0%
!! AATAAATCAAAAAGAAAAAA+AGG - chr2_2:44438607-44438626 None:intergenic 10.0%
!! AATAAATCAAAAAGAAAAAA+AGG - chr2_2:44438607-44438626 None:intergenic 10.0%
!! TCTATTGTAAAAATAAGAAT+AGG + chr2_2:44438704-44438723 Msa0252830:intron 15.0%
!! CTATTGTAAAAATAAGAATA+GGG + chr2_2:44438705-44438724 Msa0252830:intron 15.0%
!!! TTCTGAAATATAGAATATAA+GGG - chr2_2:44438848-44438867 None:intergenic 15.0%
!!! AGTTATTATCATTTGATAAT+TGG + chr2_2:44440600-44440619 Msa0252830:CDS 15.0%
!!! GTTATTATCATTTGATAATT+GGG + chr2_2:44440601-44440620 Msa0252830:CDS 15.0%
!! TCTATTGTAAAAATAAGAAT+AGG + chr2_2:44438704-44438723 Msa0252830:intron 15.0%
!! CTATTGTAAAAATAAGAATA+GGG + chr2_2:44438705-44438724 Msa0252830:intron 15.0%
!!! TTCTGAAATATAGAATATAA+GGG - chr2_2:44438848-44438867 None:intergenic 15.0%
!!! AGTTATTATCATTTGATAAT+TGG + chr2_2:44440600-44440619 Msa0252830:CDS 15.0%
!!! GTTATTATCATTTGATAATT+GGG + chr2_2:44440601-44440620 Msa0252830:CDS 15.0%
!! ATATATCTTAGCTATATTCA+AGG + chr2_2:44438809-44438828 Msa0252830:intron 20.0%
!!! CTTCTGAAATATAGAATATA+AGG - chr2_2:44438849-44438868 None:intergenic 20.0%
!! ATATAGTTACCAATAATGAA+GGG - chr2_2:44439230-44439249 None:intergenic 20.0%
!! TATATAGTTACCAATAATGA+AGG - chr2_2:44439231-44439250 None:intergenic 20.0%
!! AAATTAATAAGGCCAAAATT+TGG - chr2_2:44439628-44439647 None:intergenic 20.0%
!! AAGTTACTAACTAAATTTGA+TGG - chr2_2:44439873-44439892 None:intergenic 20.0%
!!! CAACAAACATATATCAATTT+TGG + chr2_2:44440407-44440426 Msa0252830:CDS 20.0%
!! ATATATCTTAGCTATATTCA+AGG + chr2_2:44438809-44438828 Msa0252830:intron 20.0%
!!! CTTCTGAAATATAGAATATA+AGG - chr2_2:44438849-44438868 None:intergenic 20.0%
!! ATATAGTTACCAATAATGAA+GGG - chr2_2:44439230-44439249 None:intergenic 20.0%
!! TATATAGTTACCAATAATGA+AGG - chr2_2:44439231-44439250 None:intergenic 20.0%
!! AAATTAATAAGGCCAAAATT+TGG - chr2_2:44439628-44439647 None:intergenic 20.0%
!! AAGTTACTAACTAAATTTGA+TGG - chr2_2:44439873-44439892 None:intergenic 20.0%
!!! CAACAAACATATATCAATTT+TGG + chr2_2:44440407-44440426 Msa0252830:CDS 20.0%
! ATATCTACAAATATGATCCT+TGG + chr2_2:44438551-44438570 Msa0252830:CDS 25.0%
! TATCTACAAATATGATCCTT+GGG + chr2_2:44438552-44438571 Msa0252830:CDS 25.0%
! ATAAATTAGAGAGACATACT+TGG - chr2_2:44438583-44438602 None:intergenic 25.0%
! AGAAATAGATGGTTTGATTA+TGG + chr2_2:44438781-44438800 Msa0252830:intron 25.0%
! ATAATGAAGGGAAAAGTAAA+GGG - chr2_2:44439218-44439237 None:intergenic 25.0%
! AATAATGAAGGGAAAAGTAA+AGG - chr2_2:44439219-44439238 None:intergenic 25.0%
!!! TTTACTTTTCCCTTCATTAT+TGG + chr2_2:44439218-44439237 Msa0252830:intron 25.0%
!! ACATAATACCTACCAAATTT+TGG + chr2_2:44439613-44439632 Msa0252830:intron 25.0%
! AAGGAAGAGAGAAATTAATA+AGG - chr2_2:44439639-44439658 None:intergenic 25.0%
!!! TCCTTATCAATAGGTTTTAT+AGG + chr2_2:44439780-44439799 Msa0252830:intron 25.0%
! ACCTATAAAACCTATTGATA+AGG - chr2_2:44439784-44439803 None:intergenic 25.0%
! TAAACCGCTCTTAAAATTTA+GGG - chr2_2:44439832-44439851 None:intergenic 25.0%
! TTAAACCGCTCTTAAAATTT+AGG - chr2_2:44439833-44439852 None:intergenic 25.0%
!!! CTAATTTGTTCTCTTTGTAA+TGG + chr2_2:44440002-44440021 Msa0252830:intron 25.0%
!! TGATTAATGAAGAGTACAAT+GGG - chr2_2:44440037-44440056 None:intergenic 25.0%
!! TTGATTAATGAAGAGTACAA+TGG - chr2_2:44440038-44440057 None:intergenic 25.0%
!! TTAGAACAAGTTTGTTTAAG+AGG - chr2_2:44440220-44440239 None:intergenic 25.0%
! TCAAAAGAAATGTATCACAA+AGG + chr2_2:44440288-44440307 Msa0252830:CDS 25.0%
! TAGTAGAATGAATAGCAATA+TGG + chr2_2:44440370-44440389 Msa0252830:CDS 25.0%
!! TTGTATAATTATTGACTGGT+TGG - chr2_2:44440463-44440482 None:intergenic 25.0%
!! TAACGCAATCTTCAAATTTT+TGG + chr2_2:44440558-44440577 Msa0252830:CDS 25.0%
! ATATCTACAAATATGATCCT+TGG + chr2_2:44438551-44438570 Msa0252830:CDS 25.0%
! TATCTACAAATATGATCCTT+GGG + chr2_2:44438552-44438571 Msa0252830:CDS 25.0%
! ATAAATTAGAGAGACATACT+TGG - chr2_2:44438583-44438602 None:intergenic 25.0%
! AGAAATAGATGGTTTGATTA+TGG + chr2_2:44438781-44438800 Msa0252830:intron 25.0%
! ATAATGAAGGGAAAAGTAAA+GGG - chr2_2:44439218-44439237 None:intergenic 25.0%
! AATAATGAAGGGAAAAGTAA+AGG - chr2_2:44439219-44439238 None:intergenic 25.0%
!!! TTTACTTTTCCCTTCATTAT+TGG + chr2_2:44439218-44439237 Msa0252830:intron 25.0%
!! ACATAATACCTACCAAATTT+TGG + chr2_2:44439613-44439632 Msa0252830:intron 25.0%
! AAGGAAGAGAGAAATTAATA+AGG - chr2_2:44439639-44439658 None:intergenic 25.0%
!!! TCCTTATCAATAGGTTTTAT+AGG + chr2_2:44439780-44439799 Msa0252830:intron 25.0%
! ACCTATAAAACCTATTGATA+AGG - chr2_2:44439784-44439803 None:intergenic 25.0%
! TAAACCGCTCTTAAAATTTA+GGG - chr2_2:44439832-44439851 None:intergenic 25.0%
! TTAAACCGCTCTTAAAATTT+AGG - chr2_2:44439833-44439852 None:intergenic 25.0%
!!! CTAATTTGTTCTCTTTGTAA+TGG + chr2_2:44440002-44440021 Msa0252830:intron 25.0%
!! TGATTAATGAAGAGTACAAT+GGG - chr2_2:44440037-44440056 None:intergenic 25.0%
!! TTGATTAATGAAGAGTACAA+TGG - chr2_2:44440038-44440057 None:intergenic 25.0%
!! TTAGAACAAGTTTGTTTAAG+AGG - chr2_2:44440220-44440239 None:intergenic 25.0%
! TCAAAAGAAATGTATCACAA+AGG + chr2_2:44440288-44440307 Msa0252830:CDS 25.0%
! TAGTAGAATGAATAGCAATA+TGG + chr2_2:44440370-44440389 Msa0252830:CDS 25.0%
!! TTGTATAATTATTGACTGGT+TGG - chr2_2:44440463-44440482 None:intergenic 25.0%
!! TAACGCAATCTTCAAATTTT+TGG + chr2_2:44440558-44440577 Msa0252830:CDS 25.0%
TTGATGAGATCAATAGCAAT+AGG - chr2_2:44438523-44438542 None:intergenic 30.0%
AAAATAAGAATAGGGTTTCC+AGG + chr2_2:44438713-44438732 Msa0252830:intron 30.0%
CATGCACAAATAGAAATAGA+TGG + chr2_2:44438770-44438789 Msa0252830:intron 30.0%
!! AGAAAAGTGGGTTAGAATAT+AGG - chr2_2:44439166-44439185 None:intergenic 30.0%
GCACTAAAATGTAGAAAAGT+GGG - chr2_2:44439178-44439197 None:intergenic 30.0%
TGCACTAAAATGTAGAAAAG+TGG - chr2_2:44439179-44439198 None:intergenic 30.0%
!!! GTTACTTTTTTTGCCAAAGA+GGG + chr2_2:44439312-44439331 Msa0252830:CDS 30.0%
GACAAAGCAATATACTCAAA+TGG + chr2_2:44439404-44439423 Msa0252830:CDS 30.0%
AAAGCAATATACTCAAATGG+AGG + chr2_2:44439407-44439426 Msa0252830:CDS 30.0%
! AGCATAGGAAATGTTTGTTT+TGG - chr2_2:44439552-44439571 None:intergenic 30.0%
TAATAAGGCCAAAATTTGGT+AGG - chr2_2:44439624-44439643 None:intergenic 30.0%
ATATGCCAAAAAAATGAGAC+TGG - chr2_2:44439663-44439682 None:intergenic 30.0%
GTTAGATTAGATATGATGAC+CGG + chr2_2:44439733-44439752 Msa0252830:intron 30.0%
CTCTCATATAACACATTATC+CGG - chr2_2:44439755-44439774 None:intergenic 30.0%
AGAGAGTTATCCTTATCAAT+AGG + chr2_2:44439771-44439790 Msa0252830:intron 30.0%
!! GATACCCTAAATTTTAAGAG+CGG + chr2_2:44439825-44439844 Msa0252830:intron 30.0%
!! TTGTTCTCTTTGTAATGGAT+TGG + chr2_2:44440007-44440026 Msa0252830:intron 30.0%
! GATTTTTCTATATGACATGC+AGG + chr2_2:44440241-44440260 Msa0252830:intron 30.0%
TATATGACATGCAGGAAATT+TGG + chr2_2:44440249-44440268 Msa0252830:intron 30.0%
TGTATCACAAAGGAAAAACA+TGG + chr2_2:44440298-44440317 Msa0252830:CDS 30.0%
! TCTACTACTCTTTTCATGAA+TGG - chr2_2:44440357-44440376 None:intergenic 30.0%
CTGCTTGTATAATTATTGAC+TGG - chr2_2:44440467-44440486 None:intergenic 30.0%
ATTATACAAGCAGTGATCAA+AGG + chr2_2:44440474-44440493 Msa0252830:CDS 30.0%
!! TGCGTTACATTAATTTGTTG+AGG - chr2_2:44440545-44440564 None:intergenic 30.0%
TTGATGAGATCAATAGCAAT+AGG - chr2_2:44438523-44438542 None:intergenic 30.0%
AAAATAAGAATAGGGTTTCC+AGG + chr2_2:44438713-44438732 Msa0252830:intron 30.0%
CATGCACAAATAGAAATAGA+TGG + chr2_2:44438770-44438789 Msa0252830:intron 30.0%
!! AGAAAAGTGGGTTAGAATAT+AGG - chr2_2:44439166-44439185 None:intergenic 30.0%
GCACTAAAATGTAGAAAAGT+GGG - chr2_2:44439178-44439197 None:intergenic 30.0%
TGCACTAAAATGTAGAAAAG+TGG - chr2_2:44439179-44439198 None:intergenic 30.0%
!!! GTTACTTTTTTTGCCAAAGA+GGG + chr2_2:44439312-44439331 Msa0252830:CDS 30.0%
GACAAAGCAATATACTCAAA+TGG + chr2_2:44439404-44439423 Msa0252830:CDS 30.0%
AAAGCAATATACTCAAATGG+AGG + chr2_2:44439407-44439426 Msa0252830:CDS 30.0%
! AGCATAGGAAATGTTTGTTT+TGG - chr2_2:44439552-44439571 None:intergenic 30.0%
TAATAAGGCCAAAATTTGGT+AGG - chr2_2:44439624-44439643 None:intergenic 30.0%
ATATGCCAAAAAAATGAGAC+TGG - chr2_2:44439663-44439682 None:intergenic 30.0%
GTTAGATTAGATATGATGAC+CGG + chr2_2:44439733-44439752 Msa0252830:intron 30.0%
CTCTCATATAACACATTATC+CGG - chr2_2:44439755-44439774 None:intergenic 30.0%
AGAGAGTTATCCTTATCAAT+AGG + chr2_2:44439771-44439790 Msa0252830:intron 30.0%
!! GATACCCTAAATTTTAAGAG+CGG + chr2_2:44439825-44439844 Msa0252830:intron 30.0%
!! TTGTTCTCTTTGTAATGGAT+TGG + chr2_2:44440007-44440026 Msa0252830:intron 30.0%
! GATTTTTCTATATGACATGC+AGG + chr2_2:44440241-44440260 Msa0252830:intron 30.0%
TATATGACATGCAGGAAATT+TGG + chr2_2:44440249-44440268 Msa0252830:intron 30.0%
TGTATCACAAAGGAAAAACA+TGG + chr2_2:44440298-44440317 Msa0252830:CDS 30.0%
! TCTACTACTCTTTTCATGAA+TGG - chr2_2:44440357-44440376 None:intergenic 30.0%
CTGCTTGTATAATTATTGAC+TGG - chr2_2:44440467-44440486 None:intergenic 30.0%
ATTATACAAGCAGTGATCAA+AGG + chr2_2:44440474-44440493 Msa0252830:CDS 30.0%
!! TGCGTTACATTAATTTGTTG+AGG - chr2_2:44440545-44440564 None:intergenic 30.0%
TATGAACGAGGATTTCAACA+TGG + chr2_2:44438384-44438403 Msa0252830:CDS 35.0%
GTAACAAGTTCTTCATCTGT+AGG - chr2_2:44438469-44438488 None:intergenic 35.0%
! TTTTCTTCATTCTTCCTTCC+TGG - chr2_2:44438734-44438753 None:intergenic 35.0%
!!! GGTTACTTTTTTTGCCAAAG+AGG + chr2_2:44439311-44439330 Msa0252830:CDS 35.0%
! TCCTATATTTTCTCCCTCTT+TGG - chr2_2:44439328-44439347 None:intergenic 35.0%
TTAGACCAAATAGAGTCACT+GGG + chr2_2:44439354-44439373 Msa0252830:CDS 35.0%
ATATACTCAAATGGAGGAGA+AGG + chr2_2:44439413-44439432 Msa0252830:CDS 35.0%
AAAACACTTGTTTACTACCG+TGG + chr2_2:44439458-44439477 Msa0252830:CDS 35.0%
!! GAAAAGGTACCAAAACTGAT+TGG + chr2_2:44439489-44439508 Msa0252830:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG - chr2_2:44439501-44439520 None:intergenic 35.0%
!! GTTTTGGCATCAATGTTTGA+TGG - chr2_2:44439536-44439555 None:intergenic 35.0%
ATCAGCATCATTCTTAGCAT+AGG - chr2_2:44439567-44439586 None:intergenic 35.0%
CCAAAAAAATGAGACTGGAA+AGG - chr2_2:44439658-44439677 None:intergenic 35.0%
!!! CCTTTCCAGTCTCATTTTTT+TGG + chr2_2:44439655-44439674 Msa0252830:intron 35.0%
! TTTGATAATTGGGATGAGCT+TGG + chr2_2:44440611-44440630 Msa0252830:CDS 35.0%
TATGAACGAGGATTTCAACA+TGG + chr2_2:44438384-44438403 Msa0252830:CDS 35.0%
GTAACAAGTTCTTCATCTGT+AGG - chr2_2:44438469-44438488 None:intergenic 35.0%
! TTTTCTTCATTCTTCCTTCC+TGG - chr2_2:44438734-44438753 None:intergenic 35.0%
!!! GGTTACTTTTTTTGCCAAAG+AGG + chr2_2:44439311-44439330 Msa0252830:CDS 35.0%
! TCCTATATTTTCTCCCTCTT+TGG - chr2_2:44439328-44439347 None:intergenic 35.0%
TTAGACCAAATAGAGTCACT+GGG + chr2_2:44439354-44439373 Msa0252830:CDS 35.0%
ATATACTCAAATGGAGGAGA+AGG + chr2_2:44439413-44439432 Msa0252830:CDS 35.0%
AAAACACTTGTTTACTACCG+TGG + chr2_2:44439458-44439477 Msa0252830:CDS 35.0%
!! GAAAAGGTACCAAAACTGAT+TGG + chr2_2:44439489-44439508 Msa0252830:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG - chr2_2:44439501-44439520 None:intergenic 35.0%
!! GTTTTGGCATCAATGTTTGA+TGG - chr2_2:44439536-44439555 None:intergenic 35.0%
ATCAGCATCATTCTTAGCAT+AGG - chr2_2:44439567-44439586 None:intergenic 35.0%
CCAAAAAAATGAGACTGGAA+AGG - chr2_2:44439658-44439677 None:intergenic 35.0%
!!! CCTTTCCAGTCTCATTTTTT+TGG + chr2_2:44439655-44439674 Msa0252830:intron 35.0%
! TTTGATAATTGGGATGAGCT+TGG + chr2_2:44440611-44440630 Msa0252830:CDS 35.0%
GAAAATGATGTTCCACTTCC+TGG + chr2_2:44438430-44438449 Msa0252830:CDS 40.0%
CAAGTTCTTCATCTGTAGGA+TGG - chr2_2:44438465-44438484 None:intergenic 40.0%
TAAGAATAGGGTTTCCAGGA+AGG + chr2_2:44438717-44438736 Msa0252830:intron 40.0%
ACTATTCCTCTTGTAGCTGA+TGG - chr2_2:44438977-44438996 None:intergenic 40.0%
GCCAAAGAGGGAGAAAATAT+AGG + chr2_2:44439324-44439343 Msa0252830:CDS 40.0%
GTTAGACCAAATAGAGTCAC+TGG + chr2_2:44439353-44439372 Msa0252830:CDS 40.0%
!! TCTGGATTTTGGAAAGCAAC+TGG + chr2_2:44439377-44439396 Msa0252830:CDS 40.0%
GGAGAAGGAAATGATTGTGT+TGG + chr2_2:44439428-44439447 Msa0252830:CDS 40.0%
! GTTTGACGCTTGGTAACTAA+TGG - chr2_2:44440335-44440354 None:intergenic 40.0%
TTCATGAATGGTTTGACGCT+TGG - chr2_2:44440345-44440364 None:intergenic 40.0%
CTATGAGCATCATCACAATG+AGG + chr2_2:44440436-44440455 Msa0252830:CDS 40.0%
AGATCAATTGAGCTCTTCAG+TGG + chr2_2:44440511-44440530 Msa0252830:CDS 40.0%
GAAAATGATGTTCCACTTCC+TGG + chr2_2:44438430-44438449 Msa0252830:CDS 40.0%
CAAGTTCTTCATCTGTAGGA+TGG - chr2_2:44438465-44438484 None:intergenic 40.0%
TAAGAATAGGGTTTCCAGGA+AGG + chr2_2:44438717-44438736 Msa0252830:intron 40.0%
ACTATTCCTCTTGTAGCTGA+TGG - chr2_2:44438977-44438996 None:intergenic 40.0%
GCCAAAGAGGGAGAAAATAT+AGG + chr2_2:44439324-44439343 Msa0252830:CDS 40.0%
GTTAGACCAAATAGAGTCAC+TGG + chr2_2:44439353-44439372 Msa0252830:CDS 40.0%
!! TCTGGATTTTGGAAAGCAAC+TGG + chr2_2:44439377-44439396 Msa0252830:CDS 40.0%
GGAGAAGGAAATGATTGTGT+TGG + chr2_2:44439428-44439447 Msa0252830:CDS 40.0%
! GTTTGACGCTTGGTAACTAA+TGG - chr2_2:44440335-44440354 None:intergenic 40.0%
TTCATGAATGGTTTGACGCT+TGG - chr2_2:44440345-44440364 None:intergenic 40.0%
CTATGAGCATCATCACAATG+AGG + chr2_2:44440436-44440455 Msa0252830:CDS 40.0%
AGATCAATTGAGCTCTTCAG+TGG + chr2_2:44440511-44440530 Msa0252830:CDS 40.0%
TGGAAACGAAATCCAGGAAG+TGG - chr2_2:44438445-44438464 None:intergenic 45.0%
GTAGGATGGAAACGAAATCC+AGG - chr2_2:44438451-44438470 None:intergenic 45.0%
GACATACTTGGAAGATCCCA+AGG - chr2_2:44438571-44438590 None:intergenic 45.0%
TATGCAGAAGCCAATGTACC+TGG + chr2_2:44439275-44439294 Msa0252830:intron 45.0%
! CTTTTCTGCTCCAGGTACAT+TGG - chr2_2:44439288-44439307 None:intergenic 45.0%
CAATGTACCTGGAGCAGAAA+AGG + chr2_2:44439286-44439305 Msa0252830:CDS 45.0%
! TAACCTTCCTTTTCTGCTCC+AGG - chr2_2:44439296-44439315 None:intergenic 45.0%
! TACCTTTTCCAGCACTACCA+CGG - chr2_2:44439478-44439497 None:intergenic 45.0%
TGGAAACGAAATCCAGGAAG+TGG - chr2_2:44438445-44438464 None:intergenic 45.0%
GTAGGATGGAAACGAAATCC+AGG - chr2_2:44438451-44438470 None:intergenic 45.0%
GACATACTTGGAAGATCCCA+AGG - chr2_2:44438571-44438590 None:intergenic 45.0%
TATGCAGAAGCCAATGTACC+TGG + chr2_2:44439275-44439294 Msa0252830:intron 45.0%
! CTTTTCTGCTCCAGGTACAT+TGG - chr2_2:44439288-44439307 None:intergenic 45.0%
CAATGTACCTGGAGCAGAAA+AGG + chr2_2:44439286-44439305 Msa0252830:CDS 45.0%
! TAACCTTCCTTTTCTGCTCC+AGG - chr2_2:44439296-44439315 None:intergenic 45.0%
! TACCTTTTCCAGCACTACCA+CGG - chr2_2:44439478-44439497 None:intergenic 45.0%
!! ATATATATATATATATATAG+AGG + chr2_2:44439014-44439033 Msa0252830:intron 5.0%
!! ATATATATATATATATATAG+AGG + chr2_2:44439014-44439033 Msa0252830:intron 5.0%
GAGCATCCATCAGCTACAAG+AGG + chr2_2:44438968-44438987 Msa0252830:intron 50.0%
GTACCTGGAGCAGAAAAGGA+AGG + chr2_2:44439290-44439309 Msa0252830:CDS 50.0%
CCAGACCCAGTGACTCTATT+TGG - chr2_2:44439362-44439381 None:intergenic 50.0%
CCAAATAGAGTCACTGGGTC+TGG + chr2_2:44439359-44439378 Msa0252830:CDS 50.0%
! GAGTCACTGGGTCTGGATTT+TGG + chr2_2:44439366-44439385 Msa0252830:CDS 50.0%
! GTTTACTACCGTGGTAGTGC+TGG + chr2_2:44439467-44439486 Msa0252830:CDS 50.0%
! TACCGTGGTAGTGCTGGAAA+AGG + chr2_2:44439473-44439492 Msa0252830:CDS 50.0%
GAGCATCCATCAGCTACAAG+AGG + chr2_2:44438968-44438987 Msa0252830:intron 50.0%
GTACCTGGAGCAGAAAAGGA+AGG + chr2_2:44439290-44439309 Msa0252830:CDS 50.0%
CCAGACCCAGTGACTCTATT+TGG - chr2_2:44439362-44439381 None:intergenic 50.0%
CCAAATAGAGTCACTGGGTC+TGG + chr2_2:44439359-44439378 Msa0252830:CDS 50.0%
! GAGTCACTGGGTCTGGATTT+TGG + chr2_2:44439366-44439385 Msa0252830:CDS 50.0%
! GTTTACTACCGTGGTAGTGC+TGG + chr2_2:44439467-44439486 Msa0252830:CDS 50.0%
! TACCGTGGTAGTGCTGGAAA+AGG + chr2_2:44439473-44439492 Msa0252830:CDS 50.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 44438379 44440673 44438379 ID=Msa0252830;Name=Msa0252830
chr2_2 mRNA 44438379 44440673 44438379 ID=Msa0252830-mRNA-1;Parent=Msa0252830;Name=Msa0252830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|311
chr2_2 exon 44438379 44438583 44438379 ID=Msa0252830-mRNA-1:exon:13637;Parent=Msa0252830-mRNA-1
chr2_2 exon 44439282 44439601 44439282 ID=Msa0252830-mRNA-1:exon:13638;Parent=Msa0252830-mRNA-1
chr2_2 exon 44440263 44440673 44440263 ID=Msa0252830-mRNA-1:exon:13639;Parent=Msa0252830-mRNA-1
chr2_2 CDS 44438379 44438583 44438379 ID=Msa0252830-mRNA-1:cds;Parent=Msa0252830-mRNA-1
chr2_2 CDS 44439282 44439601 44439282 ID=Msa0252830-mRNA-1:cds;Parent=Msa0252830-mRNA-1
chr2_2 CDS 44440263 44440673 44440263 ID=Msa0252830-mRNA-1:cds;Parent=Msa0252830-mRNA-1
Gene Sequence

>Msa0252830

ATGGGTATGAACGAGGATTTCAACATGGATAATGAATATGTTGTAGATGATGAAAATGATGTTCCACTTCCTGGATTTCGTTTCCATCCTACAGATGAAGAACTTGTTACTTTTTATCTTAGAAGAAAACTTGATAAGAAACCTATTGCTATTGATCTCATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGCCAATGTACCTGGAGCAGAAAAGGAAGGTTACTTTTTTTGCCAAAGAGGGAGAAAATATAGGAACAGCGTTAGACCAAATAGAGTCACTGGGTCTGGATTTTGGAAAGCAACTGGAATAGACAAAGCAATATACTCAAATGGAGGAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTGTTTACTACCGTGGTAGTGCTGGAAAAGGTACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCAAACATTGATGCCAAAACAAACATTTCCTATGCTAAGAATGATGCTGATTATGCTCATGAAGCTGAAATTTGGACATTGTGTAGAATTTTCAAAAGAAATGTATCACAAAGGAAAAACATGGCAGATGTGAAACCATTAGTTACCAAGCGTCAAACCATTCATGAAAAGAGTAGTAGAATGAATAGCAATATGGAGTTCAACACAAATCAACAAACATATATCAATTTTGGTACAAGCTATGAGCATCATCACAATGAGGACCAACCAGTCAATAATTATACAAGCAGTGATCAAAGGAATCAATTTCATGTAGATCAATTGAGCTCTTCAGTGGAACATCAACCTCAACAAATTAATGTAACGCAATCTTCAAATTTTTGGATTAAGCAAGCTGCTAATGAGTTATTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAACTTTGTTTCAGATTCACCTAGTTTGTAA
Protein sequence

>Msa0252830

MGMNEDFNMDNEYVVDDENDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKANVPGAEKEGYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKAIYSNGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNIDAKTNISYAKNDADYAHEAEIWTLCRIFKRNVSQRKNMADVKPLVTKRQTIHEKSSRMNSNMEFNTNQQTYINFGTSYEHHHNEDQPVNNYTSSDQRNQFHVDQLSSSVEHQPQQINVTQSSNFWIKQAANELLSFDNWDELGSVVNFVSDSPSL*