Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255860 | XP_013464662.2 | 90.395 | 177 | 10 | 1 | 1 | 170 | 36 | 212 | 2.99e-96 | 287 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255860 | sp|Q38741|SBP1_ANTMA | 53.982 | 113 | 41 | 2 | 30 | 135 | 22 | 130 | 9.28e-31 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255860 | A0A072VA58 | 91.813 | 171 | 7 | 1 | 7 | 170 | 1 | 171 | 8.33e-94 | 279 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0255860 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255860 | MtrunA17_Chr2g0317041 | 92.308 | 104 | 8 | 0 | 1 | 104 | 36 | 139 | 4.00e-51 | 160 |
| Msa0255860 | MtrunA17_Chr8g0360361 | 64.167 | 120 | 34 | 2 | 60 | 170 | 61 | 180 | 3.40e-44 | 144 |
| Msa0255860 | MtrunA17_Chr2g0317031 | 97.015 | 67 | 2 | 0 | 104 | 170 | 9 | 75 | 1.86e-43 | 139 |
| Msa0255860 | MtrunA17_Chr4g0046991 | 59.783 | 92 | 30 | 1 | 48 | 132 | 57 | 148 | 1.55e-30 | 108 |
| Msa0255860 | MtrunA17_Chr2g0282521 | 53.333 | 105 | 40 | 2 | 38 | 133 | 36 | 140 | 5.50e-29 | 104 |
| Msa0255860 | MtrunA17_Chr3g0122411 | 57.303 | 89 | 31 | 1 | 49 | 130 | 150 | 238 | 4.01e-28 | 108 |
| Msa0255860 | MtrunA17_Chr7g0258471 | 63.636 | 77 | 21 | 1 | 61 | 130 | 139 | 215 | 1.23e-26 | 103 |
| Msa0255860 | MtrunA17_Chr7g0231911 | 56.842 | 95 | 34 | 1 | 56 | 143 | 141 | 235 | 1.62e-26 | 102 |
| Msa0255860 | MtrunA17_Chr8g0334671 | 53.922 | 102 | 40 | 1 | 37 | 131 | 160 | 261 | 2.05e-26 | 102 |
| Msa0255860 | MtrunA17_Chr7g0270541 | 46.617 | 133 | 59 | 3 | 21 | 141 | 97 | 229 | 1.03e-25 | 102 |
| Msa0255860 | MtrunA17_Chr1g0194121 | 53.465 | 101 | 40 | 1 | 49 | 142 | 132 | 232 | 3.96e-25 | 100 |
| Msa0255860 | MtrunA17_Chr4g0061651 | 60.000 | 75 | 23 | 1 | 63 | 130 | 122 | 196 | 3.14e-24 | 97.8 |
| Msa0255860 | MtrunA17_Chr2g0302791 | 60.759 | 79 | 24 | 1 | 64 | 135 | 139 | 217 | 5.54e-24 | 97.8 |
| Msa0255860 | MtrunA17_Chr2g0308321 | 58.228 | 79 | 26 | 1 | 63 | 134 | 170 | 248 | 2.54e-23 | 95.5 |
| Msa0255860 | MtrunA17_Chr5g0420051 | 59.211 | 76 | 24 | 1 | 62 | 130 | 179 | 254 | 7.85e-23 | 93.6 |
| Msa0255860 | MtrunA17_Chr8g0377401 | 52.439 | 82 | 32 | 1 | 61 | 135 | 159 | 240 | 1.68e-22 | 90.5 |
| Msa0255860 | MtrunA17_Chr1g0162871 | 54.023 | 87 | 33 | 1 | 62 | 141 | 102 | 188 | 2.47e-22 | 92.8 |
| Msa0255860 | MtrunA17_Chr7g0224821 | 56.000 | 75 | 26 | 1 | 63 | 130 | 76 | 150 | 7.12e-22 | 90.5 |
| Msa0255860 | MtrunA17_Chr8g0377421 | 53.247 | 77 | 29 | 1 | 61 | 130 | 129 | 205 | 2.24e-21 | 88.2 |
| Msa0255860 | MtrunA17_Chr3g0132091 | 55.405 | 74 | 26 | 1 | 64 | 130 | 73 | 146 | 2.44e-21 | 89.0 |
| Msa0255860 | MtrunA17_Chr8g0386271 | 52.941 | 85 | 33 | 1 | 64 | 141 | 99 | 183 | 1.29e-20 | 87.0 |
| Msa0255860 | MtrunA17_Chr2g0286661 | 44.898 | 98 | 42 | 3 | 64 | 150 | 103 | 199 | 9.41e-17 | 76.6 |
| Msa0255860 | MtrunA17_Chr1g0175031 | 60.417 | 48 | 19 | 0 | 57 | 104 | 67 | 114 | 1.93e-13 | 63.9 |
| Msa0255860 | MtrunA17_Chr8g0377431 | 62.791 | 43 | 16 | 0 | 62 | 104 | 149 | 191 | 2.71e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255860 | AT1G53160.3 | 54.206 | 107 | 39 | 3 | 50 | 149 | 42 | 145 | 1.92e-28 | 103 |
| Msa0255860 | AT2G33810.1 | 62.500 | 80 | 23 | 1 | 60 | 132 | 50 | 129 | 2.17e-28 | 102 |
| Msa0255860 | AT1G53160.2 | 54.206 | 107 | 39 | 3 | 50 | 149 | 42 | 145 | 4.82e-28 | 103 |
| Msa0255860 | AT1G53160.1 | 54.206 | 107 | 39 | 3 | 50 | 149 | 42 | 145 | 4.82e-28 | 103 |
| Msa0255860 | AT3G15270.1 | 43.537 | 147 | 75 | 2 | 1 | 140 | 1 | 146 | 2.55e-27 | 101 |
| Msa0255860 | AT1G02065.1 | 51.887 | 106 | 40 | 3 | 50 | 144 | 171 | 276 | 6.60e-26 | 101 |
| Msa0255860 | AT3G60030.1 | 58.824 | 85 | 28 | 1 | 64 | 141 | 127 | 211 | 1.03e-25 | 103 |
| Msa0255860 | AT1G69170.1 | 48.077 | 104 | 47 | 1 | 34 | 130 | 94 | 197 | 1.03e-25 | 101 |
| Msa0255860 | AT2G42200.1 | 59.036 | 83 | 27 | 1 | 62 | 137 | 72 | 154 | 7.25e-25 | 99.0 |
| Msa0255860 | AT1G20980.1 | 59.302 | 86 | 26 | 2 | 54 | 132 | 112 | 195 | 1.40e-24 | 99.8 |
| Msa0255860 | AT5G43270.3 | 55.056 | 89 | 33 | 1 | 58 | 139 | 163 | 251 | 3.39e-24 | 97.8 |
| Msa0255860 | AT5G43270.1 | 55.056 | 89 | 33 | 1 | 58 | 139 | 163 | 251 | 3.39e-24 | 97.8 |
| Msa0255860 | AT5G43270.2 | 55.056 | 89 | 33 | 1 | 58 | 139 | 163 | 251 | 3.39e-24 | 97.8 |
| Msa0255860 | AT1G76580.1 | 48.113 | 106 | 47 | 2 | 62 | 160 | 112 | 216 | 4.22e-23 | 95.5 |
| Msa0255860 | AT2G47070.1 | 55.435 | 92 | 30 | 2 | 64 | 148 | 106 | 193 | 6.64e-23 | 95.1 |
| Msa0255860 | AT1G27370.6 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 8.01e-23 | 93.2 |
| Msa0255860 | AT1G76580.3 | 48.113 | 106 | 47 | 2 | 62 | 160 | 112 | 216 | 9.40e-23 | 94.4 |
| Msa0255860 | AT1G76580.2 | 48.113 | 106 | 47 | 2 | 62 | 160 | 112 | 216 | 9.57e-23 | 94.4 |
| Msa0255860 | AT1G27370.1 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 2.01e-22 | 92.8 |
| Msa0255860 | AT1G27370.5 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 2.01e-22 | 92.8 |
| Msa0255860 | AT1G27370.3 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 2.01e-22 | 92.8 |
| Msa0255860 | AT1G27370.2 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 2.01e-22 | 92.8 |
| Msa0255860 | AT1G27370.4 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 2.01e-22 | 92.8 |
| Msa0255860 | AT1G27370.7 | 50.549 | 91 | 38 | 1 | 47 | 130 | 159 | 249 | 2.01e-22 | 92.8 |
| Msa0255860 | AT5G50570.1 | 55.263 | 76 | 27 | 1 | 62 | 130 | 99 | 174 | 8.94e-22 | 90.5 |
| Msa0255860 | AT5G50570.2 | 55.263 | 76 | 27 | 1 | 62 | 130 | 99 | 174 | 8.94e-22 | 90.5 |
| Msa0255860 | AT5G50670.1 | 55.263 | 76 | 27 | 1 | 62 | 130 | 99 | 174 | 8.94e-22 | 90.5 |
| Msa0255860 | AT5G50670.2 | 55.263 | 76 | 27 | 1 | 62 | 130 | 99 | 174 | 8.94e-22 | 90.5 |
| Msa0255860 | AT1G27360.2 | 53.659 | 82 | 31 | 1 | 56 | 130 | 167 | 248 | 2.29e-21 | 89.7 |
| Msa0255860 | AT1G27360.1 | 53.659 | 82 | 31 | 1 | 56 | 130 | 167 | 248 | 2.29e-21 | 89.7 |
| Msa0255860 | AT1G27360.3 | 53.659 | 82 | 31 | 1 | 56 | 130 | 167 | 248 | 2.29e-21 | 89.7 |
| Msa0255860 | AT1G27360.4 | 53.659 | 82 | 31 | 1 | 56 | 130 | 167 | 248 | 2.29e-21 | 89.7 |
| Msa0255860 | AT3G57920.1 | 55.696 | 79 | 28 | 1 | 64 | 135 | 59 | 137 | 3.57e-21 | 89.0 |
| Msa0255860 | AT5G18830.2 | 42.105 | 95 | 45 | 2 | 64 | 148 | 138 | 232 | 5.13e-15 | 72.4 |
| Msa0255860 | AT5G18830.1 | 42.105 | 95 | 45 | 2 | 64 | 148 | 138 | 232 | 5.30e-15 | 72.0 |
| Msa0255860 | AT5G18830.3 | 42.105 | 95 | 45 | 2 | 64 | 148 | 138 | 232 | 5.69e-15 | 72.0 |
| Msa0255860 | AT1G02065.2 | 58.621 | 58 | 21 | 1 | 50 | 104 | 171 | 228 | 1.83e-14 | 69.3 |
Find 32 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTTCTACTTGACAAAA+AGG | 0.293853 | 2_2:+50211363 | None:intergenic |
| GCACCTGTTGTGGTGGTTGC+AGG | 0.368915 | 2_2:-50211273 | Msa0255860:CDS |
| AATGAACCTCACAAACCTTA+TGG | 0.389353 | 2_2:+50211301 | None:intergenic |
| AAACATCAGTTGAGAAGGTT+TGG | 0.391376 | 2_2:-50211515 | Msa0255860:CDS |
| ATGAACATAACAAGTAGTTC+TGG | 0.412406 | 2_2:-50207883 | Msa0255860:CDS |
| ATCCCTGCAACCACCACAAC+AGG | 0.415205 | 2_2:+50211270 | None:intergenic |
| AGAAATAGAAGTTGAAGAAG+AGG | 0.430573 | 2_2:-50211475 | Msa0255860:CDS |
| AACCACCACAACAGGTGCTT+TGG | 0.433611 | 2_2:+50211278 | None:intergenic |
| TGCACTGAAGGAAGCAGTAC+TGG | 0.446911 | 2_2:-50207943 | Msa0255860:CDS |
| AAGAAAGGTGTTTGTGTGAG+TGG | 0.453403 | 2_2:-50211423 | Msa0255860:CDS |
| AGCAAAATAATGATGGTGAT+TGG | 0.459606 | 2_2:-50207918 | Msa0255860:CDS |
| CGGCGTCGTAAAAGCACTGC+TGG | 0.466987 | 2_2:-50207970 | Msa0255860:CDS |
| GAAAATCTTCCACCTCTACT+TGG | 0.489950 | 2_2:+50211390 | None:intergenic |
| GAGATATCATCGTCGCCATA+AGG | 0.496552 | 2_2:-50211316 | Msa0255860:CDS |
| TTGTGGTGGTTGCAGGGATG+AGG | 0.505992 | 2_2:-50211266 | Msa0255860:CDS |
| GAAGCAAACATCAGTTGAGA+AGG | 0.513422 | 2_2:-50211520 | Msa0255860:CDS |
| ACTGCTGGAACTTGCACTGA+AGG | 0.529046 | 2_2:-50207955 | Msa0255860:CDS |
| GAAGTTGAAGAAGAGGAAGA+AGG | 0.533880 | 2_2:-50211468 | Msa0255860:CDS |
| TGGTTGCAGGGATGAGGCAA+AGG | 0.552699 | 2_2:-50211260 | Msa0255860:intron |
| AGAAAGGTGTTTGTGTGAGT+GGG | 0.554222 | 2_2:-50211422 | Msa0255860:CDS |
| TTCCAAAGCACCTGTTGTGG+TGG | 0.554919 | 2_2:-50211280 | Msa0255860:CDS |
| GAAGATGATGAGAAGAAGAA+AGG | 0.566806 | 2_2:-50211438 | Msa0255860:CDS |
| AGAAAAGAGCCAAGTAGAGG+TGG | 0.571945 | 2_2:-50211399 | Msa0255860:CDS |
| CACCTGTTGTGGTGGTTGCA+GGG | 0.588977 | 2_2:-50211272 | Msa0255860:CDS |
| ACTGGCCAGCAAAATAATGA+TGG | 0.592203 | 2_2:-50207925 | Msa0255860:CDS |
| TCATTCCAAAGCACCTGTTG+TGG | 0.599393 | 2_2:-50211283 | Msa0255860:CDS |
| GTTGAAGAAGAGGAAGAAGG+TGG | 0.601205 | 2_2:-50211465 | Msa0255860:CDS |
| CATAGTACACAATGGAAGCA+AGG | 0.607056 | 2_2:-50211557 | None:intergenic |
| GGGAGAAAAGAGCCAAGTAG+AGG | 0.628005 | 2_2:-50211402 | Msa0255860:CDS |
| TCGTCGCCATAAGGTTTGTG+AGG | 0.640730 | 2_2:-50211307 | Msa0255860:CDS |
| AATGGAAGCAAGGAAAACAA+TGG | 0.652509 | 2_2:-50211547 | Msa0255860:CDS |
| GCTTAGTGCGACACAACGAA+CGG | 0.657384 | 2_2:-50207990 | Msa0255860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAATAAATAAATTGAT+GGG | + | chr2_2:50208674-50208693 | None:intergenic | 10.0% |
| !!! | AAAAATTTGTTTTATTAGTT+GGG | - | chr2_2:50210120-50210139 | Msa0255860:intron | 10.0% |
| !!! | ATCATTTATAAACATATTTT+CGG | + | chr2_2:50210353-50210372 | None:intergenic | 10.0% |
| !! | GAATAAAAATAAAATATTTG+GGG | + | chr2_2:50210710-50210729 | None:intergenic | 10.0% |
| !! | AAATACAAAAAAAATATTTG+AGG | + | chr2_2:50211121-50211140 | None:intergenic | 10.0% |
| !!! | TCAAATATTTTTTTTGTATT+TGG | - | chr2_2:50211120-50211139 | Msa0255860:intron | 10.0% |
| !! | CTGAAAAATAAATAAATTGA+TGG | + | chr2_2:50208675-50208694 | None:intergenic | 15.0% |
| !! | AACTATAATCAAATAGTTTA+CGG | + | chr2_2:50208704-50208723 | None:intergenic | 15.0% |
| !!! | TTTTTTATGGTGTTTATTTT+CGG | + | chr2_2:50209115-50209134 | None:intergenic | 15.0% |
| !!! | CAAAAATTTGTTTTATTAGT+TGG | - | chr2_2:50210119-50210138 | Msa0255860:intron | 15.0% |
| !!! | AAAATTTGTTTTATTAGTTG+GGG | - | chr2_2:50210121-50210140 | Msa0255860:intron | 15.0% |
| !!! | TTTTAAAACTCTTAGAATTT+TGG | + | chr2_2:50210419-50210438 | None:intergenic | 15.0% |
| !! | TAGCTAAAAATATATTATTG+GGG | + | chr2_2:50210763-50210782 | None:intergenic | 15.0% |
| !! | GTAGCTAAAAATATATTATT+GGG | + | chr2_2:50210764-50210783 | None:intergenic | 15.0% |
| !!! | TTCTTTTTCTCTTTTCTTAT+TGG | + | chr2_2:50208368-50208387 | None:intergenic | 20.0% |
| !! | GTAAACTATTTGATTATAGT+TGG | - | chr2_2:50208703-50208722 | Msa0255860:intron | 20.0% |
| !! | GATGAGTTTCATATAATTTA+AGG | + | chr2_2:50208730-50208749 | None:intergenic | 20.0% |
| !! | AATGTTATAGACTAAAATGA+TGG | + | chr2_2:50208780-50208799 | None:intergenic | 20.0% |
| !! | TGATAGTTTAGAGATTAAAT+AGG | - | chr2_2:50208891-50208910 | Msa0255860:intron | 20.0% |
| !!! | AAATAGGCTCTTTTAATATT+AGG | - | chr2_2:50208907-50208926 | Msa0255860:intron | 20.0% |
| !!! | TTTTTATGGTGTTTATTTTC+GGG | + | chr2_2:50209114-50209133 | None:intergenic | 20.0% |
| !!! | TTTGATTCAAGTTTGTTTTT+GGG | + | chr2_2:50209366-50209385 | None:intergenic | 20.0% |
| !! | AAAGTCAAATTAAGTTAGTT+AGG | - | chr2_2:50210091-50210110 | Msa0255860:intron | 20.0% |
| !! | AATATTCTAACATGATATCA+CGG | - | chr2_2:50210238-50210257 | Msa0255860:intron | 20.0% |
| !! | GGTAGCTAAAAATATATTAT+TGG | + | chr2_2:50210765-50210784 | None:intergenic | 20.0% |
| !!! | TTTGTAAATGAATTTGTTTG+AGG | + | chr2_2:50210786-50210805 | None:intergenic | 20.0% |
| !! | AACAATCAGCATAAATTAAA+AGG | - | chr2_2:50210804-50210823 | Msa0255860:intron | 20.0% |
| ! | AAAACTTTAGATAATAGTGG+AGG | + | chr2_2:50208207-50208226 | None:intergenic | 25.0% |
| ! | GACAAAACTTTAGATAATAG+TGG | + | chr2_2:50208210-50208229 | None:intergenic | 25.0% |
| !!! | TTATCTAAAGTTTTGTCTGT+TGG | - | chr2_2:50208213-50208232 | Msa0255860:intron | 25.0% |
| ! | TCTATAACATTCTAATAGCA+TGG | - | chr2_2:50208789-50208808 | Msa0255860:intron | 25.0% |
| !! | TTTTTATGTCATGAAGATGA+AGG | + | chr2_2:50208972-50208991 | None:intergenic | 25.0% |
| !!! | ATTTAGAGGAGTGTTATTTT+GGG | + | chr2_2:50209242-50209261 | None:intergenic | 25.0% |
| !!! | CTTTGATTCAAGTTTGTTTT+TGG | + | chr2_2:50209367-50209386 | None:intergenic | 25.0% |
| !!! | TTAATTTGACTTTTCATTGC+TGG | + | chr2_2:50210084-50210103 | None:intergenic | 25.0% |
| ! | GTGATATCATGTTAGAATAT+TGG | + | chr2_2:50210239-50210258 | None:intergenic | 25.0% |
| !!! | TATTTGTTATTGGTTTGAAC+CGG | - | chr2_2:50210282-50210301 | Msa0255860:intron | 25.0% |
| !!! | AAACTCTTAGAATTTTGGTT+GGG | + | chr2_2:50210414-50210433 | None:intergenic | 25.0% |
| !!! | AAAACTCTTAGAATTTTGGT+TGG | + | chr2_2:50210415-50210434 | None:intergenic | 25.0% |
| !!! | TTGACCTTTTTCACTATATT+AGG | - | chr2_2:50211276-50211295 | Msa0255860:CDS | 25.0% |
| AGAAATAGAAGTTGAAGAAG+AGG | - | chr2_2:50207929-50207948 | Msa0255860:CDS | 30.0% | |
| CAACTTTCTACTTGACAAAA+AGG | + | chr2_2:50208044-50208063 | None:intergenic | 30.0% | |
| ! | TTTTGTCAAGTAGAAAGTTG+TGG | - | chr2_2:50208044-50208063 | Msa0255860:intron | 30.0% |
| !!! | TTTTGTCTGTTGGTTTGAAT+AGG | - | chr2_2:50208223-50208242 | Msa0255860:intron | 30.0% |
| ATCAAAAAGTTGTCGCAAAA+TGG | + | chr2_2:50208279-50208298 | None:intergenic | 30.0% | |
| CACTAGTAGTATACTATAGA+TGG | - | chr2_2:50208441-50208460 | Msa0255860:intron | 30.0% | |
| TTCAAATTTCTTGAATCCGT+CGG | + | chr2_2:50208526-50208545 | None:intergenic | 30.0% | |
| TTCAAGAAATTTGAATACCG+AGG | - | chr2_2:50208531-50208550 | Msa0255860:intron | 30.0% | |
| TCAAGAAATTTGAATACCGA+GGG | - | chr2_2:50208532-50208551 | Msa0255860:intron | 30.0% | |
| ! | CGCTTGCTAATTTATATAGA+TGG | + | chr2_2:50208560-50208579 | None:intergenic | 30.0% |
| AACAGAGGAATACAAACTAA+AGG | - | chr2_2:50209068-50209087 | Msa0255860:intron | 30.0% | |
| !!! | TTAGGTTGTGATGTTGATTT+TGG | + | chr2_2:50209153-50209172 | None:intergenic | 30.0% |
| ! | TTCGTAAAGGAGTCTATTTT+AGG | + | chr2_2:50209171-50209190 | None:intergenic | 30.0% |
| !! | TTATGGATATCGTTTTTCAG+TGG | + | chr2_2:50209198-50209217 | None:intergenic | 30.0% |
| !!! | CATTTAGAGGAGTGTTATTT+TGG | + | chr2_2:50209243-50209262 | None:intergenic | 30.0% |
| TGTATGAGTGTTTCATTTAG+AGG | + | chr2_2:50209256-50209275 | None:intergenic | 30.0% | |
| !!! | AGTTTGTTTTTGGGCTTTAT+TGG | + | chr2_2:50209357-50209376 | None:intergenic | 30.0% |
| GGTCAAAACATCAATCAAAA+AGG | - | chr2_2:50209599-50209618 | Msa0255860:intron | 30.0% | |
| !!! | TATCTCTTGTTTTGAGGTTT+GGG | + | chr2_2:50209681-50209700 | None:intergenic | 30.0% |
| !!! | TTTAGTTTTTGTGGTGATGA+TGG | + | chr2_2:50209948-50209967 | None:intergenic | 30.0% |
| TACAAGCTAAGAGTTGAATT+AGG | - | chr2_2:50210208-50210227 | Msa0255860:intron | 30.0% | |
| !! | TGTGTTGGACTATTTGTTAT+TGG | - | chr2_2:50210272-50210291 | Msa0255860:intron | 30.0% |
| !! | CTATAGTTGTTTCTAGAGAT+CGG | + | chr2_2:50210880-50210899 | None:intergenic | 30.0% |
| CTCTATAAAATCAAGCTTCA+AGG | + | chr2_2:50211042-50211061 | None:intergenic | 30.0% | |
| !!! | ATGGAAGCATTTCTTTGTTT+TGG | + | chr2_2:50211305-50211324 | None:intergenic | 30.0% |
| TTTCTAATTAGGTGAATGCA+TGG | + | chr2_2:50211324-50211343 | None:intergenic | 30.0% | |
| CGTATCAAAGGTTTCTAATT+AGG | + | chr2_2:50211335-50211354 | None:intergenic | 30.0% | |
| !! | AATCACCATCATTATTTTGC+TGG | + | chr2_2:50211487-50211506 | None:intergenic | 30.0% |
| ! | AGCAAAATAATGATGGTGAT+TGG | - | chr2_2:50211486-50211505 | Msa0255860:CDS | 30.0% |
| ATGAACATAACAAGTAGTTC+TGG | - | chr2_2:50211521-50211540 | Msa0255860:CDS | 30.0% | |
| AAACATCAGTTGAGAAGGTT+TGG | - | chr2_2:50207889-50207908 | Msa0255860:CDS | 35.0% | |
| GAAGATGATGAGAAGAAGAA+AGG | - | chr2_2:50207966-50207985 | Msa0255860:CDS | 35.0% | |
| CTTTCTACTTGACAAAAAGG+TGG | + | chr2_2:50208041-50208060 | None:intergenic | 35.0% | |
| AATGAACCTCACAAACCTTA+TGG | + | chr2_2:50208106-50208125 | None:intergenic | 35.0% | |
| ! | CTTTAGATAATAGTGGAGGA+TGG | + | chr2_2:50208203-50208222 | None:intergenic | 35.0% |
| ATTTATATAGATGGTGCCCT+CGG | + | chr2_2:50208551-50208570 | None:intergenic | 35.0% | |
| TGGGTTATGAACTAAATCGA+TGG | + | chr2_2:50208655-50208674 | None:intergenic | 35.0% | |
| !! | CTAAAGGTGTCGTATATAAG+CGG | - | chr2_2:50209084-50209103 | Msa0255860:intron | 35.0% |
| !!! | TGTGTAGGGGTGATTTTTTA+TGG | + | chr2_2:50209128-50209147 | None:intergenic | 35.0% |
| !!! | TGTTGATTTTGGTGTGTGTA+GGG | + | chr2_2:50209142-50209161 | None:intergenic | 35.0% |
| !!! | ATGTTGATTTTGGTGTGTGT+AGG | + | chr2_2:50209143-50209162 | None:intergenic | 35.0% |
| !!! | TGTTATTTTGGGATGTGTAG+TGG | + | chr2_2:50209231-50209250 | None:intergenic | 35.0% |
| !! | ACTTATTGTGTGATGGATTC+TGG | + | chr2_2:50209555-50209574 | None:intergenic | 35.0% |
| CAGTCTTACTTATTGTGTGA+TGG | + | chr2_2:50209562-50209581 | None:intergenic | 35.0% | |
| CATCACACAATAAGTAAGAC+TGG | - | chr2_2:50209560-50209579 | Msa0255860:intron | 35.0% | |
| ! | TTGGGTTGTTAAGGTGTTTA+GGG | + | chr2_2:50209663-50209682 | None:intergenic | 35.0% |
| !! | TTTGGGTTGTTAAGGTGTTT+AGG | + | chr2_2:50209664-50209683 | None:intergenic | 35.0% |
| !!! | TTTTGAGGTTTGGGTTGTTA+AGG | + | chr2_2:50209672-50209691 | None:intergenic | 35.0% |
| !!! | CTATCTCTTGTTTTGAGGTT+TGG | + | chr2_2:50209682-50209701 | None:intergenic | 35.0% |
| !!! | TTTTTTGTGGTGGTTGTTGT+GGG | + | chr2_2:50209755-50209774 | None:intergenic | 35.0% |
| !!! | TGTGGTCGTTTTAGTTTTTG+TGG | + | chr2_2:50209957-50209976 | None:intergenic | 35.0% |
| !! | ATTCATTGTGGCTGTTTCTT+CGG | + | chr2_2:50210050-50210069 | None:intergenic | 35.0% |
| GTTTGTGGGTATATTCATTG+TGG | + | chr2_2:50210062-50210081 | None:intergenic | 35.0% | |
| !!! | ACTTTTCATTGCTGGTTTGT+GGG | + | chr2_2:50210076-50210095 | None:intergenic | 35.0% |
| ! | ACGGTCTATTTAAGATGTGT+TGG | - | chr2_2:50210257-50210276 | Msa0255860:intron | 35.0% |
| TCTCACTCATCTGTAAAGTA+AGG | - | chr2_2:50210583-50210602 | Msa0255860:intron | 35.0% | |
| AACCTAAACACTTCTGTAAC+AGG | - | chr2_2:50210647-50210666 | Msa0255860:intron | 35.0% | |
| ACCTAAACACTTCTGTAACA+GGG | - | chr2_2:50210648-50210667 | Msa0255860:intron | 35.0% | |
| ! | AGCTAGAGTAATTTTCACGA+GGG | + | chr2_2:50211148-50211167 | None:intergenic | 35.0% |
| ! | AAGCTAGAGTAATTTTCACG+AGG | + | chr2_2:50211149-50211168 | None:intergenic | 35.0% |
| !!! | TTTTTTTTGGTTACAGCCAG+CGG | + | chr2_2:50211174-50211193 | None:intergenic | 35.0% |
| GAGGCCTAATATAGTGAAAA+AGG | + | chr2_2:50211283-50211302 | None:intergenic | 35.0% | |
| !!! | GAAGCATTTCTTTGTTTTGG+AGG | + | chr2_2:50211302-50211321 | None:intergenic | 35.0% |
| GAAGCAAACATCAGTTGAGA+AGG | - | chr2_2:50207884-50207903 | Msa0255860:CDS | 40.0% | |
| GAAGTTGAAGAAGAGGAAGA+AGG | - | chr2_2:50207936-50207955 | Msa0255860:CDS | 40.0% | |
| !! | AAGAAAGGTGTTTGTGTGAG+TGG | - | chr2_2:50207981-50208000 | Msa0255860:CDS | 40.0% |
| !! | AGAAAGGTGTTTGTGTGAGT+GGG | - | chr2_2:50207982-50208001 | Msa0255860:CDS | 40.0% |
| GAAAATCTTCCACCTCTACT+TGG | + | chr2_2:50208017-50208036 | None:intergenic | 40.0% | |
| ! | TAGATAATAGTGGAGGATGG+AGG | + | chr2_2:50208200-50208219 | None:intergenic | 40.0% |
| AAATTTCTTGAATCCGTCGG+TGG | + | chr2_2:50208523-50208542 | None:intergenic | 40.0% | |
| !! | TGTAGAGTTTAGCTTGTGTG+TGG | - | chr2_2:50208938-50208957 | Msa0255860:intron | 40.0% |
| !! | GTAGAGTTTAGCTTGTGTGT+GGG | - | chr2_2:50208939-50208958 | Msa0255860:intron | 40.0% |
| !! | TAGAGTTTAGCTTGTGTGTG+GGG | - | chr2_2:50208940-50208959 | Msa0255860:intron | 40.0% |
| ATCCTTGTTCGTCTTGAGTA+GGG | + | chr2_2:50209042-50209061 | None:intergenic | 40.0% | |
| TACTCAAGACGAACAAGGAT+CGG | - | chr2_2:50209042-50209061 | Msa0255860:intron | 40.0% | |
| !! | GTTGATTTTGGTGTGTGTAG+GGG | + | chr2_2:50209141-50209160 | None:intergenic | 40.0% |
| TTTCAGTGGTCGTTTCGTAA+AGG | + | chr2_2:50209184-50209203 | None:intergenic | 40.0% | |
| ! | CTTTATTGGTGTTCTTTCGG+TGG | + | chr2_2:50209343-50209362 | None:intergenic | 40.0% |
| !! | GGGCTTTATTGGTGTTCTTT+CGG | + | chr2_2:50209346-50209365 | None:intergenic | 40.0% |
| !! | ATCGCTTTTGATTCGAGATC+GGG | + | chr2_2:50209398-50209417 | None:intergenic | 40.0% |
| !! | GATCGCTTTTGATTCGAGAT+CGG | + | chr2_2:50209399-50209418 | None:intergenic | 40.0% |
| GATCTCGAATCAAAAGCGAT+CGG | - | chr2_2:50209398-50209417 | Msa0255860:intron | 40.0% | |
| TGACTACAGTGTTTCTCTAG+TGG | + | chr2_2:50209472-50209491 | None:intergenic | 40.0% | |
| !!! | GTTACTTTTGCTTCGAGATC+GGG | + | chr2_2:50209525-50209544 | None:intergenic | 40.0% |
| !!! | GGTTACTTTTGCTTCGAGAT+CGG | + | chr2_2:50209526-50209545 | None:intergenic | 40.0% |
| GATCTCGAAGCAAAAGTAAC+CGG | - | chr2_2:50209525-50209544 | Msa0255860:intron | 40.0% | |
| !! | ATTGTGTGATGGATTCTGGT+GGG | + | chr2_2:50209551-50209570 | None:intergenic | 40.0% |
| !! | TATTGTGTGATGGATTCTGG+TGG | + | chr2_2:50209552-50209571 | None:intergenic | 40.0% |
| ! | AAGACTGGCTACAAGATTTG+TGG | - | chr2_2:50209575-50209594 | Msa0255860:intron | 40.0% |
| !! | AGGTGTTTAGGGTGTTTTGA+GGG | + | chr2_2:50209652-50209671 | None:intergenic | 40.0% |
| !! | AAGGTGTTTAGGGTGTTTTG+AGG | + | chr2_2:50209653-50209672 | None:intergenic | 40.0% |
| !!! | TGTCGCTATCTCTTGTTTTG+AGG | + | chr2_2:50209687-50209706 | None:intergenic | 40.0% |
| CAAAACAAGAGATAGCGACA+AGG | - | chr2_2:50209687-50209706 | Msa0255860:intron | 40.0% | |
| AGAGATAGCGACAAGGAATA+TGG | - | chr2_2:50209694-50209713 | Msa0255860:intron | 40.0% | |
| ! | TTGTGGGTGATTCCTTTTGA+AGG | + | chr2_2:50209739-50209758 | None:intergenic | 40.0% |
| !!! | GTTTTTTGTGGTGGTTGTTG+TGG | + | chr2_2:50209756-50209775 | None:intergenic | 40.0% |
| !!! | GAGTTGAGTGTTTTTTGTGG+TGG | + | chr2_2:50209765-50209784 | None:intergenic | 40.0% |
| !!! | GAGGAGTTGAGTGTTTTTTG+TGG | + | chr2_2:50209768-50209787 | None:intergenic | 40.0% |
| ATTCGGTAAAATGGGGTGAT+GGG | + | chr2_2:50209803-50209822 | None:intergenic | 40.0% | |
| !! | TGGTGGTGATTCGGTAAAAT+GGG | + | chr2_2:50209811-50209830 | None:intergenic | 40.0% |
| !! | GCTGTTTCTTCGGAATGTTA+TGG | + | chr2_2:50210040-50210059 | None:intergenic | 40.0% |
| !!! | GACTTTTCATTGCTGGTTTG+TGG | + | chr2_2:50210077-50210096 | None:intergenic | 40.0% |
| GTCACTAGCTAATGTCACTA+CGG | - | chr2_2:50210146-50210165 | Msa0255860:intron | 40.0% | |
| TCACTAGCTAATGTCACTAC+GGG | - | chr2_2:50210147-50210166 | Msa0255860:intron | 40.0% | |
| AACCGGTTGAATTGTAAGTG+TGG | - | chr2_2:50210299-50210318 | Msa0255860:intron | 40.0% | |
| CTCCACACTTACAATTCAAC+CGG | + | chr2_2:50210304-50210323 | None:intergenic | 40.0% | |
| GTTGAATTGTAAGTGTGGAG+AGG | - | chr2_2:50210304-50210323 | Msa0255860:intron | 40.0% | |
| CCTAAACACTTCTGTAACAG+GGG | - | chr2_2:50210649-50210668 | Msa0255860:intron | 40.0% | |
| ! | CTAGAGTAATTTTCACGAGG+GGG | + | chr2_2:50211146-50211165 | None:intergenic | 40.0% |
| ! | GCTAGAGTAATTTTCACGAG+GGG | + | chr2_2:50211147-50211166 | None:intergenic | 40.0% |
| ACTGGCCAGCAAAATAATGA+TGG | - | chr2_2:50211479-50211498 | Msa0255860:CDS | 40.0% | |
| GTTGAAGAAGAGGAAGAAGG+TGG | - | chr2_2:50207939-50207958 | Msa0255860:CDS | 45.0% | |
| AGAAAAGAGCCAAGTAGAGG+TGG | - | chr2_2:50208005-50208024 | Msa0255860:CDS | 45.0% | |
| GAGATATCATCGTCGCCATA+AGG | - | chr2_2:50208088-50208107 | Msa0255860:intron | 45.0% | |
| ! | TCATTCCAAAGCACCTGTTG+TGG | - | chr2_2:50208121-50208140 | Msa0255860:intron | 45.0% |
| ! | GGTTTTGCCAACAATGTAGC+AGG | - | chr2_2:50208165-50208184 | Msa0255860:intron | 45.0% |
| GATCACACCTGCTACATTGT+TGG | + | chr2_2:50208175-50208194 | None:intergenic | 45.0% | |
| !! | AGAGTTTAGCTTGTGTGTGG+GGG | - | chr2_2:50208941-50208960 | Msa0255860:intron | 45.0% |
| ATCCCTACTCAAGACGAACA+AGG | - | chr2_2:50209037-50209056 | Msa0255860:intron | 45.0% | |
| GATCCTTGTTCGTCTTGAGT+AGG | + | chr2_2:50209043-50209062 | None:intergenic | 45.0% | |
| AACAAGGATCGGTGAAACAG+AGG | - | chr2_2:50209053-50209072 | Msa0255860:intron | 45.0% | |
| GTAGTGGCAATGAGTGGTTA+TGG | + | chr2_2:50209215-50209234 | None:intergenic | 45.0% | |
| ! | ACAGTGTTTCTCTAGTGGAC+CGG | + | chr2_2:50209467-50209486 | None:intergenic | 45.0% |
| ACTGGCTACAAGATTTGTGG+TGG | - | chr2_2:50209578-50209597 | Msa0255860:intron | 45.0% | |
| AGGAACAATGCTCAGCTCAA+AGG | - | chr2_2:50209619-50209638 | Msa0255860:intron | 45.0% | |
| AATATGGACCCGAAAACCAG+AGG | - | chr2_2:50209710-50209729 | Msa0255860:intron | 45.0% | |
| ! | GATTCGGTAAAATGGGGTGA+TGG | + | chr2_2:50209804-50209823 | None:intergenic | 45.0% |
| !! | GGTGGTGATTCGGTAAAATG+GGG | + | chr2_2:50209810-50209829 | None:intergenic | 45.0% |
| !! | GTGGTGGTGATTCGGTAAAA+TGG | + | chr2_2:50209812-50209831 | None:intergenic | 45.0% |
| !! | CCCCTGTTACAGAAGTGTTT+AGG | + | chr2_2:50210652-50210671 | None:intergenic | 45.0% |
| ! | GCGAATCCCTTTGTATTGGT+GGG | - | chr2_2:50210671-50210690 | Msa0255860:intron | 45.0% |
| ! | CGAATCCCTTTGTATTGGTG+GGG | - | chr2_2:50210672-50210691 | Msa0255860:intron | 45.0% |
| AGCTACCCCACCAATACAAA+GGG | + | chr2_2:50210680-50210699 | None:intergenic | 45.0% | |
| AAGCTACCCCACCAATACAA+AGG | + | chr2_2:50210681-50210700 | None:intergenic | 45.0% | |
| ! | TTGTATTGGTGGGGTAGCTT+TGG | - | chr2_2:50210681-50210700 | Msa0255860:intron | 45.0% |
| !!! | TAATTTAAATTTTAAAACAA+TGG | + | chr2_2:50208489-50208508 | None:intergenic | 5.0% |
| !! | AAAAAAATCTATAAAAAAAA+GGG | + | chr2_2:50210491-50210510 | None:intergenic | 5.0% |
| !! | AAAAAAAATCTATAAAAAAA+AGG | + | chr2_2:50210492-50210511 | None:intergenic | 5.0% |
| !! | TGAATAAAAATAAAATATTT+GGG | + | chr2_2:50210711-50210730 | None:intergenic | 5.0% |
| !! | TTGAATAAAAATAAAATATT+TGG | + | chr2_2:50210712-50210731 | None:intergenic | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+TGG | + | chr2_2:50211187-50211206 | None:intergenic | 5.0% |
| GGGAGAAAAGAGCCAAGTAG+AGG | - | chr2_2:50208002-50208021 | Msa0255860:CDS | 50.0% | |
| TCGTCGCCATAAGGTTTGTG+AGG | - | chr2_2:50208097-50208116 | Msa0255860:intron | 50.0% | |
| ! | TTCCAAAGCACCTGTTGTGG+TGG | - | chr2_2:50208124-50208143 | Msa0255860:intron | 50.0% |
| AACCACCACAACAGGTGCTT+TGG | + | chr2_2:50208129-50208148 | None:intergenic | 50.0% | |
| GGATGTGTAGTGGCAATGAG+TGG | + | chr2_2:50209221-50209240 | None:intergenic | 50.0% | |
| CTTCCACCACCTTTAACCTC+TGG | - | chr2_2:50209316-50209335 | Msa0255860:intron | 50.0% | |
| TTCGGTGGACCAGAGGTTAA+AGG | + | chr2_2:50209328-50209347 | None:intergenic | 50.0% | |
| !! | GTTTGGTCTTGGAGTCTGGT+GGG | + | chr2_2:50209424-50209443 | None:intergenic | 50.0% |
| !! | TCTGGTTTGGTCTTGGAGTC+TGG | + | chr2_2:50209428-50209447 | None:intergenic | 50.0% |
| GACTCCAAGACCAAACCAGA+CGG | - | chr2_2:50209428-50209447 | Msa0255860:intron | 50.0% | |
| ACTCCAAGACCAAACCAGAC+GGG | - | chr2_2:50209429-50209448 | Msa0255860:intron | 50.0% | |
| ! | AGTGTTTCTCTAGTGGACCG+GGG | + | chr2_2:50209465-50209484 | None:intergenic | 50.0% |
| ! | CAGTGTTTCTCTAGTGGACC+GGG | + | chr2_2:50209466-50209485 | None:intergenic | 50.0% |
| TTTGCTTCGAGATCGGGAGT+TGG | + | chr2_2:50209519-50209538 | None:intergenic | 50.0% | |
| !! | TGATGGGTGTTGCTTAGGTG+AGG | + | chr2_2:50209787-50209806 | None:intergenic | 50.0% |
| !! | ATTGCGAGGTGGTGTTGTAG+TGG | + | chr2_2:50209904-50209923 | None:intergenic | 50.0% |
| !! | ATGATGGTGGTATTGCGAGG+TGG | + | chr2_2:50209915-50209934 | None:intergenic | 50.0% |
| ! | TGATGGTGATGCAGGGATGA+TGG | + | chr2_2:50209931-50209950 | None:intergenic | 50.0% |
| !! | GTGGTGATGATGGTGATGCA+GGG | + | chr2_2:50209938-50209957 | None:intergenic | 50.0% |
| !! | TGTGGTGATGATGGTGATGC+AGG | + | chr2_2:50209939-50209958 | None:intergenic | 50.0% |
| AGTCTCGCTGTCTTGCTCTT+GGG | + | chr2_2:50209988-50210007 | None:intergenic | 50.0% | |
| AGCGAGACTGAAAGTCTCCA+AGG | - | chr2_2:50209999-50210018 | Msa0255860:intron | 50.0% | |
| AGGGGCGAATCCCTTTGTAT+TGG | - | chr2_2:50210667-50210686 | Msa0255860:intron | 50.0% | |
| GGCGAATCCCTTTGTATTGG+TGG | - | chr2_2:50210670-50210689 | Msa0255860:intron | 50.0% | |
| ! | AATTACTCTAGCTTCGCCGC+TGG | - | chr2_2:50211155-50211174 | Msa0255860:intron | 50.0% |
| AACCTTTGATACGTGTGCGC+AGG | - | chr2_2:50211342-50211361 | Msa0255860:CDS | 50.0% | |
| AACCTGCGCACACGTATCAA+AGG | + | chr2_2:50211347-50211366 | None:intergenic | 50.0% | |
| GCTTAGTGCGACACAACGAA+CGG | - | chr2_2:50211414-50211433 | Msa0255860:CDS | 50.0% | |
| ACTGCTGGAACTTGCACTGA+AGG | - | chr2_2:50211449-50211468 | Msa0255860:CDS | 50.0% | |
| TGCACTGAAGGAAGCAGTAC+TGG | - | chr2_2:50211461-50211480 | Msa0255860:CDS | 50.0% | |
| CACCTGTTGTGGTGGTTGCA+GGG | - | chr2_2:50208132-50208151 | Msa0255860:intron | 55.0% | |
| ATCCCTGCAACCACCACAAC+AGG | + | chr2_2:50208137-50208156 | None:intergenic | 55.0% | |
| TTGTGGTGGTTGCAGGGATG+AGG | - | chr2_2:50208138-50208157 | Msa0255860:intron | 55.0% | |
| TGGTTGCAGGGATGAGGCAA+AGG | - | chr2_2:50208144-50208163 | Msa0255860:intron | 55.0% | |
| TAGAGTCTAGTCGCCACCGA+CGG | - | chr2_2:50208507-50208526 | Msa0255860:intron | 55.0% | |
| !! | TTTAGCTTGTGTGTGGGGGC+AGG | - | chr2_2:50208945-50208964 | Msa0255860:intron | 55.0% |
| GGACCAGAGGTTAAAGGTGG+TGG | + | chr2_2:50209322-50209341 | None:intergenic | 55.0% | |
| GGTGGACCAGAGGTTAAAGG+TGG | + | chr2_2:50209325-50209344 | None:intergenic | 55.0% | |
| GTGTTCTTTCGGTGGACCAG+AGG | + | chr2_2:50209335-50209354 | None:intergenic | 55.0% | |
| !! | GGTTTGGTCTTGGAGTCTGG+TGG | + | chr2_2:50209425-50209444 | None:intergenic | 55.0% |
| !! | TAAGAGGTGCCCGTCTGGTT+TGG | + | chr2_2:50209441-50209460 | None:intergenic | 55.0% |
| ! | GTGTTTCTCTAGTGGACCGG+GGG | + | chr2_2:50209464-50209483 | None:intergenic | 55.0% |
| !! | TGTGATGGATTCTGGTGGGC+CGG | + | chr2_2:50209547-50209566 | None:intergenic | 55.0% |
| ATGGACCCGAAAACCAGAGG+CGG | - | chr2_2:50209713-50209732 | Msa0255860:intron | 55.0% | |
| !!! | TGAAGGCCGCCTCTGGTTTT+CGG | + | chr2_2:50209722-50209741 | None:intergenic | 55.0% |
| AACCAGAGGCGGCCTTCAAA+AGG | - | chr2_2:50209724-50209743 | Msa0255860:intron | 55.0% | |
| !! | TTCCTTTTGAAGGCCGCCTC+TGG | + | chr2_2:50209729-50209748 | None:intergenic | 55.0% |
| !! | TGGGGTGATGGGTGTTGCTT+AGG | + | chr2_2:50209792-50209811 | None:intergenic | 55.0% |
| !! | GAGTGGTGGTGGTGGTGATT+CGG | + | chr2_2:50209820-50209839 | None:intergenic | 55.0% |
| !! | GTGTTGATGAGTGGTGGTGG+TGG | + | chr2_2:50209828-50209847 | None:intergenic | 55.0% |
| !! | GTGGTGTTGATGAGTGGTGG+TGG | + | chr2_2:50209831-50209850 | None:intergenic | 55.0% |
| !! | GTGGTGGTGTTGATGAGTGG+TGG | + | chr2_2:50209834-50209853 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGTGTTGATGAG+TGG | + | chr2_2:50209837-50209856 | None:intergenic | 55.0% |
| !! | GTATTGCGTAGTGGTGGTGG+TGG | + | chr2_2:50209850-50209869 | None:intergenic | 55.0% |
| GTGGTATTGCGTAGTGGTGG+TGG | + | chr2_2:50209853-50209872 | None:intergenic | 55.0% | |
| GTGGTGGTATTGCGTAGTGG+TGG | + | chr2_2:50209856-50209875 | None:intergenic | 55.0% | |
| !! | GTGGTGGTGGTATTGCGTAG+TGG | + | chr2_2:50209859-50209878 | None:intergenic | 55.0% |
| !! | TGTTTCAGCTGTGGTGGTGG+TGG | + | chr2_2:50209872-50209891 | None:intergenic | 55.0% |
| TGGTGTTTCAGCTGTGGTGG+TGG | + | chr2_2:50209875-50209894 | None:intergenic | 55.0% | |
| AGGTGGTGTTTCAGCTGTGG+TGG | + | chr2_2:50209878-50209897 | None:intergenic | 55.0% | |
| AGGAGGTGGTGTTTCAGCTG+TGG | + | chr2_2:50209881-50209900 | None:intergenic | 55.0% | |
| !! | TGGTGTTGTAGTGGAGGAGG+TGG | + | chr2_2:50209895-50209914 | None:intergenic | 55.0% |
| !! | AGGTGGTGTTGTAGTGGAGG+AGG | + | chr2_2:50209898-50209917 | None:intergenic | 55.0% |
| !! | GGGATGATGGTGGTATTGCG+AGG | + | chr2_2:50209918-50209937 | None:intergenic | 55.0% |
| ! | TGGTGATGCAGGGATGATGG+TGG | + | chr2_2:50209928-50209947 | None:intergenic | 55.0% |
| TGTCTTGCTCTTGGGCTTGC+TGG | + | chr2_2:50209980-50209999 | None:intergenic | 55.0% | |
| CAGTCTCGCTGTCTTGCTCT+TGG | + | chr2_2:50209989-50210008 | None:intergenic | 55.0% | |
| ! | GGCGATGTAGCTGCTTTCCT+TGG | + | chr2_2:50210019-50210038 | None:intergenic | 55.0% |
| GCACCTGTTGTGGTGGTTGC+AGG | - | chr2_2:50208131-50208150 | Msa0255860:intron | 60.0% | |
| !! | GTGCCCGTCTGGTTTGGTCT+TGG | + | chr2_2:50209435-50209454 | None:intergenic | 60.0% |
| ! | TCTAGTGGACCGGGGGTAAG+AGG | + | chr2_2:50209457-50209476 | None:intergenic | 60.0% |
| !!! | GAAGGCCGCCTCTGGTTTTC+GGG | + | chr2_2:50209721-50209740 | None:intergenic | 60.0% |
| !! | GCGAGGTGGTGTTGTAGTGG+AGG | + | chr2_2:50209901-50209920 | None:intergenic | 60.0% |
| !! | TGCTCTTGGGCTTGCTGGTG+TGG | + | chr2_2:50209975-50209994 | None:intergenic | 60.0% |
| !! | CGGCGTCGTAAAAGCACTGC+TGG | - | chr2_2:50211434-50211453 | Msa0255860:CDS | 60.0% |
| AGACGGGCACCTCTTACCCC+CGG | - | chr2_2:50209445-50209464 | Msa0255860:intron | 65.0% | |
| !! | GGGGGTAAGAGGTGCCCGTC+TGG | + | chr2_2:50209446-50209465 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 50207858 | 50211568 | 50207858 | ID=Msa0255860;Name=Msa0255860 |
| chr2_2 | mRNA | 50207858 | 50211568 | 50207858 | ID=Msa0255860-mRNA-1;Parent=Msa0255860;Name=Msa0255860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|170 |
| chr2_2 | exon | 50211261 | 50211568 | 50211261 | ID=Msa0255860-mRNA-1:exon:15168;Parent=Msa0255860-mRNA-1 |
| chr2_2 | exon | 50207858 | 50208062 | 50207858 | ID=Msa0255860-mRNA-1:exon:15167;Parent=Msa0255860-mRNA-1 |
| chr2_2 | CDS | 50211261 | 50211568 | 50211261 | ID=Msa0255860-mRNA-1:cds;Parent=Msa0255860-mRNA-1 |
| chr2_2 | CDS | 50207858 | 50208062 | 50207858 | ID=Msa0255860-mRNA-1:cds;Parent=Msa0255860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
