Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257110 | XP_003596568.1 | 98.618 | 579 | 8 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1188 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257110 | sp|Q69VG1|CIGR1_ORYSJ | 58.092 | 587 | 222 | 10 | 1 | 579 | 1 | 571 | 0.0 | 646 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257110 | G7ITP3 | 98.618 | 579 | 8 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1188 |
Gene ID | Type | Classification |
---|---|---|
Msa0257110 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257110 | MtrunA17_Chr2g0319091 | 98.618 | 579 | 8 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1188 |
Msa0257110 | MtrunA17_Chr5g0447691 | 64.083 | 387 | 136 | 1 | 195 | 578 | 157 | 543 | 0.0 | 529 |
Msa0257110 | MtrunA17_Chr3g0101141 | 58.871 | 372 | 153 | 0 | 207 | 578 | 170 | 541 | 1.54e-169 | 492 |
Msa0257110 | MtrunA17_Chr5g0445331 | 50.198 | 506 | 204 | 8 | 79 | 578 | 68 | 531 | 4.24e-167 | 486 |
Msa0257110 | MtrunA17_Chr4g0076091 | 48.723 | 470 | 188 | 3 | 117 | 578 | 118 | 542 | 4.75e-158 | 463 |
Msa0257110 | MtrunA17_Chr1g0159461 | 43.970 | 539 | 281 | 7 | 44 | 578 | 70 | 591 | 9.10e-148 | 438 |
Msa0257110 | MtrunA17_Chr2g0290241 | 53.175 | 378 | 170 | 2 | 205 | 578 | 50 | 424 | 1.91e-143 | 421 |
Msa0257110 | MtrunA17_Chr3g0125811 | 53.243 | 370 | 173 | 0 | 210 | 579 | 201 | 570 | 3.86e-143 | 426 |
Msa0257110 | MtrunA17_Chr7g0224271 | 33.091 | 550 | 309 | 10 | 67 | 578 | 144 | 672 | 1.50e-79 | 264 |
Msa0257110 | MtrunA17_Chr4g0031711 | 33.511 | 376 | 245 | 3 | 208 | 578 | 357 | 732 | 2.53e-69 | 238 |
Msa0257110 | MtrunA17_Chr4g0031721 | 32.632 | 380 | 253 | 2 | 202 | 578 | 304 | 683 | 1.33e-67 | 232 |
Msa0257110 | MtrunA17_Chr2g0328391 | 33.511 | 376 | 243 | 4 | 208 | 578 | 295 | 668 | 1.97e-67 | 231 |
Msa0257110 | MtrunA17_Chr2g0306641 | 36.410 | 390 | 225 | 9 | 195 | 578 | 114 | 486 | 1.09e-66 | 225 |
Msa0257110 | MtrunA17_Chr7g0236851 | 36.533 | 375 | 222 | 6 | 210 | 578 | 292 | 656 | 1.12e-66 | 229 |
Msa0257110 | MtrunA17_Chr4g0031731 | 29.946 | 551 | 349 | 11 | 40 | 577 | 98 | 624 | 3.58e-65 | 224 |
Msa0257110 | MtrunA17_Chr4g0031701 | 29.583 | 551 | 351 | 11 | 40 | 577 | 98 | 624 | 3.81e-65 | 224 |
Msa0257110 | MtrunA17_Chr6g0468561 | 36.623 | 385 | 214 | 10 | 210 | 579 | 293 | 662 | 2.45e-63 | 220 |
Msa0257110 | MtrunA17_Chr8g0357601 | 35.401 | 387 | 223 | 7 | 208 | 579 | 178 | 552 | 3.74e-63 | 217 |
Msa0257110 | MtrunA17_Chr3g0110971 | 34.872 | 390 | 215 | 9 | 209 | 578 | 216 | 586 | 4.75e-63 | 218 |
Msa0257110 | MtrunA17_Chr8g0376381 | 36.170 | 376 | 206 | 12 | 213 | 578 | 170 | 521 | 6.79e-63 | 216 |
Msa0257110 | MtrunA17_Chr4g0057891 | 31.854 | 383 | 239 | 5 | 209 | 578 | 146 | 519 | 7.94e-62 | 213 |
Msa0257110 | MtrunA17_Chr7g0238891 | 31.720 | 372 | 253 | 1 | 208 | 578 | 368 | 739 | 8.36e-61 | 214 |
Msa0257110 | MtrunA17_Chr7g0245601 | 35.422 | 367 | 216 | 7 | 216 | 578 | 442 | 791 | 8.78e-60 | 213 |
Msa0257110 | MtrunA17_Chr4g0031741 | 32.440 | 373 | 247 | 4 | 208 | 578 | 280 | 649 | 1.56e-59 | 209 |
Msa0257110 | MtrunA17_Chr2g0328381 | 32.095 | 377 | 243 | 4 | 208 | 578 | 271 | 640 | 6.43e-59 | 207 |
Msa0257110 | MtrunA17_Chr2g0328341 | 31.016 | 374 | 251 | 3 | 208 | 578 | 268 | 637 | 2.72e-57 | 203 |
Msa0257110 | MtrunA17_Chr3g0085681 | 30.769 | 416 | 232 | 6 | 213 | 578 | 26 | 435 | 2.84e-56 | 196 |
Msa0257110 | MtrunA17_Chr2g0328431 | 32.048 | 415 | 269 | 7 | 166 | 578 | 250 | 653 | 3.65e-56 | 200 |
Msa0257110 | MtrunA17_Chr2g0328411 | 31.948 | 385 | 258 | 3 | 195 | 578 | 272 | 653 | 1.23e-55 | 199 |
Msa0257110 | MtrunA17_Chr4g0038851 | 31.395 | 430 | 229 | 8 | 209 | 578 | 45 | 468 | 1.23e-55 | 194 |
Msa0257110 | MtrunA17_Chr4g0039661 | 37.607 | 351 | 194 | 11 | 238 | 578 | 219 | 554 | 2.73e-53 | 190 |
Msa0257110 | MtrunA17_Chr4g0038761 | 34.771 | 371 | 219 | 10 | 216 | 579 | 88 | 442 | 1.90e-51 | 183 |
Msa0257110 | MtrunA17_Chr5g0401131 | 31.937 | 382 | 239 | 8 | 212 | 578 | 114 | 489 | 2.13e-51 | 184 |
Msa0257110 | MtrunA17_Chr4g0057291 | 32.292 | 384 | 237 | 11 | 208 | 578 | 288 | 661 | 7.87e-51 | 186 |
Msa0257110 | MtrunA17_Chr1g0183641 | 32.546 | 381 | 224 | 12 | 208 | 578 | 119 | 476 | 3.78e-48 | 174 |
Msa0257110 | MtrunA17_Chr2g0328401 | 30.250 | 400 | 270 | 5 | 163 | 561 | 245 | 636 | 1.06e-47 | 176 |
Msa0257110 | MtrunA17_Chr3g0085361 | 32.448 | 339 | 173 | 6 | 289 | 578 | 18 | 349 | 7.69e-47 | 167 |
Msa0257110 | MtrunA17_Chr2g0328361 | 30.053 | 376 | 227 | 8 | 208 | 578 | 270 | 614 | 2.29e-46 | 172 |
Msa0257110 | MtrunA17_Chr1g0200401 | 29.247 | 465 | 255 | 17 | 162 | 579 | 22 | 459 | 1.46e-42 | 159 |
Msa0257110 | MtrunA17_Chr3g0114841 | 31.313 | 396 | 233 | 12 | 209 | 578 | 117 | 499 | 5.08e-41 | 155 |
Msa0257110 | MtrunA17_Chr2g0329591 | 29.124 | 388 | 245 | 8 | 211 | 578 | 73 | 450 | 8.78e-41 | 154 |
Msa0257110 | MtrunA17_Chr5g0424131 | 31.026 | 390 | 240 | 11 | 209 | 578 | 118 | 498 | 2.92e-40 | 153 |
Msa0257110 | MtrunA17_Chr2g0328371 | 33.333 | 240 | 155 | 2 | 293 | 531 | 12 | 247 | 1.22e-38 | 142 |
Msa0257110 | MtrunA17_Chr5g0401421 | 25.527 | 427 | 248 | 11 | 209 | 578 | 32 | 445 | 4.88e-34 | 134 |
Msa0257110 | MtrunA17_Chr2g0294461 | 25.831 | 391 | 256 | 10 | 209 | 578 | 207 | 584 | 8.44e-32 | 130 |
Msa0257110 | MtrunA17_Chr4g0053901 | 24.197 | 467 | 299 | 9 | 166 | 578 | 2 | 467 | 2.87e-31 | 127 |
Msa0257110 | MtrunA17_Chr5g0396491 | 34.762 | 210 | 130 | 2 | 209 | 417 | 53 | 256 | 8.09e-31 | 125 |
Msa0257110 | MtrunA17_Chr5g0396491 | 42.282 | 149 | 85 | 1 | 431 | 578 | 329 | 477 | 8.94e-30 | 122 |
Msa0257110 | MtrunA17_Chr2g0294471 | 25.131 | 382 | 267 | 9 | 209 | 578 | 201 | 575 | 2.22e-27 | 116 |
Msa0257110 | MtrunA17_Chr8g0383981 | 27.344 | 384 | 241 | 15 | 209 | 578 | 136 | 495 | 2.63e-27 | 115 |
Msa0257110 | MtrunA17_Chr7g0230771 | 26.042 | 384 | 268 | 8 | 197 | 578 | 361 | 730 | 1.87e-26 | 114 |
Msa0257110 | MtrunA17_Chr7g0270031 | 25.654 | 382 | 260 | 11 | 208 | 578 | 185 | 553 | 3.19e-26 | 112 |
Msa0257110 | MtrunA17_Chr7g0230731 | 25.260 | 384 | 271 | 7 | 197 | 578 | 358 | 727 | 2.74e-25 | 110 |
Msa0257110 | MtrunA17_Chr4g0012071 | 25.132 | 378 | 237 | 11 | 227 | 578 | 193 | 550 | 2.96e-25 | 110 |
Msa0257110 | MtrunA17_Chr1g0194621 | 25.424 | 354 | 231 | 12 | 243 | 578 | 179 | 517 | 4.82e-24 | 105 |
Msa0257110 | MtrunA17_Chr2g0323111 | 25.862 | 174 | 127 | 2 | 406 | 578 | 133 | 305 | 5.70e-16 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257110 | AT1G50600.3 | 63.061 | 379 | 140 | 0 | 200 | 578 | 147 | 525 | 6.94e-177 | 511 |
Msa0257110 | AT1G50600.2 | 63.061 | 379 | 140 | 0 | 200 | 578 | 222 | 600 | 1.54e-176 | 513 |
Msa0257110 | AT1G50600.1 | 63.061 | 379 | 140 | 0 | 200 | 578 | 218 | 596 | 1.66e-176 | 512 |
Msa0257110 | AT5G48150.1 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 7.40e-172 | 496 |
Msa0257110 | AT5G48150.4 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 7.40e-172 | 496 |
Msa0257110 | AT5G48150.2 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 7.40e-172 | 496 |
Msa0257110 | AT5G48150.3 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 7.40e-172 | 496 |
Msa0257110 | AT2G04890.1 | 60.317 | 378 | 143 | 1 | 201 | 578 | 42 | 412 | 3.57e-165 | 476 |
Msa0257110 | AT4G17230.1 | 54.278 | 374 | 171 | 0 | 205 | 578 | 151 | 524 | 3.11e-145 | 430 |
Msa0257110 | AT4G17230.2 | 54.278 | 374 | 171 | 0 | 205 | 578 | 151 | 524 | 3.11e-145 | 430 |
Msa0257110 | AT1G21450.1 | 46.039 | 467 | 227 | 7 | 114 | 579 | 151 | 593 | 9.77e-138 | 413 |
Msa0257110 | AT1G07530.1 | 33.600 | 375 | 247 | 2 | 206 | 578 | 390 | 764 | 5.35e-70 | 240 |
Msa0257110 | AT5G52510.1 | 35.844 | 385 | 222 | 6 | 210 | 579 | 266 | 640 | 2.50e-67 | 231 |
Msa0257110 | AT2G29060.2 | 33.867 | 375 | 244 | 3 | 208 | 578 | 280 | 654 | 8.92e-66 | 227 |
Msa0257110 | AT3G03450.1 | 35.027 | 374 | 230 | 7 | 209 | 578 | 180 | 544 | 1.07e-65 | 224 |
Msa0257110 | AT2G29060.1 | 33.867 | 375 | 244 | 3 | 208 | 578 | 317 | 691 | 1.30e-65 | 227 |
Msa0257110 | AT1G66350.1 | 34.667 | 375 | 219 | 9 | 209 | 578 | 152 | 505 | 1.16e-64 | 220 |
Msa0257110 | AT5G17490.1 | 33.957 | 374 | 228 | 8 | 209 | 578 | 157 | 515 | 2.63e-63 | 217 |
Msa0257110 | AT3G46600.2 | 34.140 | 372 | 241 | 4 | 209 | 578 | 1 | 370 | 6.78e-62 | 209 |
Msa0257110 | AT3G46600.1 | 34.316 | 373 | 241 | 4 | 208 | 578 | 208 | 578 | 1.23e-61 | 214 |
Msa0257110 | AT3G46600.3 | 34.316 | 373 | 241 | 4 | 208 | 578 | 176 | 546 | 1.60e-61 | 213 |
Msa0257110 | AT1G14920.1 | 35.809 | 377 | 218 | 10 | 209 | 578 | 169 | 528 | 2.80e-61 | 212 |
Msa0257110 | AT5G59450.1 | 33.333 | 378 | 242 | 6 | 208 | 578 | 223 | 597 | 9.47e-61 | 212 |
Msa0257110 | AT1G50420.1 | 31.944 | 432 | 225 | 6 | 209 | 578 | 54 | 478 | 1.11e-60 | 209 |
Msa0257110 | AT3G54220.1 | 34.383 | 413 | 250 | 9 | 172 | 578 | 252 | 649 | 1.49e-59 | 210 |
Msa0257110 | AT2G01570.1 | 33.862 | 378 | 224 | 9 | 209 | 578 | 221 | 580 | 1.59e-58 | 206 |
Msa0257110 | AT2G37650.2 | 31.720 | 372 | 251 | 2 | 208 | 578 | 331 | 700 | 4.22e-58 | 207 |
Msa0257110 | AT2G37650.1 | 31.720 | 372 | 251 | 2 | 208 | 578 | 343 | 712 | 4.28e-58 | 207 |
Msa0257110 | AT1G07520.2 | 31.316 | 380 | 251 | 6 | 208 | 578 | 150 | 528 | 8.63e-57 | 199 |
Msa0257110 | AT1G07520.4 | 31.316 | 380 | 251 | 6 | 208 | 578 | 150 | 528 | 8.63e-57 | 199 |
Msa0257110 | AT1G07520.1 | 30.871 | 379 | 254 | 4 | 208 | 578 | 314 | 692 | 3.13e-56 | 201 |
Msa0257110 | AT1G07520.3 | 30.871 | 379 | 254 | 4 | 208 | 578 | 315 | 693 | 3.51e-56 | 201 |
Msa0257110 | AT5G66770.1 | 34.908 | 381 | 225 | 10 | 209 | 579 | 217 | 584 | 8.11e-54 | 192 |
Msa0257110 | AT2G29065.1 | 31.234 | 381 | 251 | 6 | 208 | 578 | 248 | 627 | 4.85e-53 | 191 |
Msa0257110 | AT3G50650.1 | 34.726 | 383 | 225 | 10 | 208 | 578 | 172 | 541 | 1.55e-51 | 186 |
Msa0257110 | AT1G55580.1 | 34.304 | 309 | 179 | 6 | 285 | 578 | 145 | 444 | 1.59e-49 | 178 |
Msa0257110 | AT5G41920.1 | 31.738 | 397 | 245 | 8 | 191 | 578 | 20 | 399 | 1.10e-47 | 172 |
Msa0257110 | AT4G37650.1 | 30.102 | 392 | 240 | 10 | 212 | 578 | 146 | 528 | 2.66e-47 | 174 |
Msa0257110 | AT1G63100.2 | 31.877 | 389 | 239 | 8 | 208 | 578 | 273 | 653 | 5.96e-47 | 175 |
Msa0257110 | AT1G63100.1 | 31.877 | 389 | 239 | 8 | 208 | 578 | 248 | 628 | 7.32e-47 | 174 |
Msa0257110 | AT4G08250.1 | 28.198 | 383 | 252 | 10 | 209 | 578 | 104 | 476 | 2.71e-33 | 133 |
Msa0257110 | AT3G49950.1 | 24.031 | 387 | 271 | 9 | 209 | 578 | 27 | 407 | 2.24e-30 | 124 |
Msa0257110 | AT2G45160.1 | 26.171 | 363 | 218 | 12 | 237 | 578 | 305 | 638 | 1.05e-23 | 105 |
Msa0257110 | AT3G60630.1 | 27.723 | 303 | 188 | 8 | 291 | 578 | 335 | 621 | 8.63e-23 | 103 |
Msa0257110 | AT3G13840.1 | 25.109 | 458 | 301 | 14 | 135 | 578 | 80 | 509 | 1.01e-20 | 96.3 |
Msa0257110 | AT5G67411.1 | 34.821 | 112 | 71 | 2 | 405 | 516 | 89 | 198 | 2.09e-11 | 63.9 |
Find 153 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTGTCCCTACTTAAAATT+TGG | 0.130718 | 2_2:-52829450 | Msa0257110:CDS |
AAAGATGGGGCAATGCTCTT+AGG | 0.253125 | 2_2:-52828649 | Msa0257110:CDS |
CTTCAGGCTCTCTGCACTTA+AGG | 0.286477 | 2_2:+52829511 | None:intergenic |
AGAATGATCTTTGCGTATAT+TGG | 0.305897 | 2_2:+52830072 | None:intergenic |
CCAGAGGCTCGGTGCTTATA+TGG | 0.308533 | 2_2:-52829586 | Msa0257110:CDS |
GCCTTGATGTCTAAGAAATT+CGG | 0.335923 | 2_2:-52829207 | Msa0257110:CDS |
TACCACATCTAATTCTTCAT+TGG | 0.339637 | 2_2:-52829916 | Msa0257110:CDS |
TCCACAAGGGTGACCACTTT+AGG | 0.340706 | 2_2:+52829000 | None:intergenic |
GTGAGTAATTCTTCACCTTC+AGG | 0.364548 | 2_2:+52829495 | None:intergenic |
CCATATAAGCACCGAGCCTC+TGG | 0.385440 | 2_2:+52829586 | None:intergenic |
GGATCCTTGAAAGTTGGCTT+TGG | 0.385729 | 2_2:-52830233 | Msa0257110:CDS |
TAATGTGGAGCAGCATTGTT+TGG | 0.392234 | 2_2:-52828857 | Msa0257110:CDS |
GTTTCCAAAGCCAACTTTCA+AGG | 0.393842 | 2_2:+52830229 | None:intergenic |
TTCTAGCCGTTTCTATCAAT+CGG | 0.394967 | 2_2:+52829637 | None:intergenic |
TGCTTCGGCAATGGCTCCAT+TGG | 0.397586 | 2_2:+52829416 | None:intergenic |
CTACTTAAAATTTGGTTACA+TGG | 0.400326 | 2_2:-52829442 | Msa0257110:CDS |
ACACAACACCTTTCTTCAAC+AGG | 0.402167 | 2_2:-52828960 | Msa0257110:CDS |
ACCACATCTAATTCTTCATT+GGG | 0.403891 | 2_2:-52829915 | Msa0257110:CDS |
GGCATCCCGGTCGAGTTTCA+TGG | 0.404017 | 2_2:-52829186 | Msa0257110:CDS |
TTCAGGCTCTCTGCACTTAA+GGG | 0.407636 | 2_2:+52829512 | None:intergenic |
AGCATGTCTCTTGTCACGTC+TGG | 0.415541 | 2_2:+52829147 | None:intergenic |
ATCCTCATTCCTGCATGCTT+CGG | 0.417086 | 2_2:+52829401 | None:intergenic |
AGAAGTAGTTGGAGAGAGAT+TGG | 0.419561 | 2_2:-52829229 | Msa0257110:CDS |
GTTGCAAGGACGGAAGCATC+AGG | 0.425786 | 2_2:-52829552 | Msa0257110:CDS |
GTCACGTCTGGACCGAAAAC+AGG | 0.432073 | 2_2:+52829159 | None:intergenic |
TATCAGACACGGAGAAGCTT+TGG | 0.432770 | 2_2:-52829121 | Msa0257110:CDS |
GAAAATCAGACACGCCTTGT+TGG | 0.435341 | 2_2:-52829979 | Msa0257110:CDS |
ATTTGATTGCCTGCTACTGC+TGG | 0.442739 | 2_2:+52829794 | None:intergenic |
CTCCTTGCTATTTCTTGAGA+GGG | 0.443191 | 2_2:+52828885 | None:intergenic |
ATGAGAGGAAAACGGTGAAT+CGG | 0.450658 | 2_2:+52830202 | None:intergenic |
AGCAAACCATTTGGCAGTGA+TGG | 0.458184 | 2_2:+52830257 | None:intergenic |
GAAATGCTGTGTCTATCAAT+GGG | 0.460974 | 2_2:-52829617 | Msa0257110:CDS |
TTGCTTGGATCCTTGAAAGT+TGG | 0.461484 | 2_2:-52830239 | Msa0257110:CDS |
AAGGATCCAAGCAAACCATT+TGG | 0.464280 | 2_2:+52830248 | None:intergenic |
TCACTGCCAAATGGTTTGCT+TGG | 0.464474 | 2_2:-52830254 | Msa0257110:CDS |
TCCTAAAGTGGTCACCCTTG+TGG | 0.466054 | 2_2:-52829001 | Msa0257110:CDS |
AGAAATGCTGTGTCTATCAA+TGG | 0.466776 | 2_2:-52829618 | Msa0257110:CDS |
AAGATGGGGCAATGCTCTTA+GGG | 0.467770 | 2_2:-52828648 | Msa0257110:CDS |
CGCACGTGGGGTGCCCCACC+AGG | 0.468298 | 2_2:+52829303 | None:intergenic |
CTCGGTGCTTATATGGTAGA+AGG | 0.468460 | 2_2:-52829579 | Msa0257110:CDS |
TGAGAGGAAAACGGTGAATC+GGG | 0.469261 | 2_2:+52830203 | None:intergenic |
GTCTAAGAAATTCGGCATCC+CGG | 0.473230 | 2_2:-52829199 | Msa0257110:CDS |
AAGTCTAGGTTGACAATGGC+TGG | 0.474170 | 2_2:-52828760 | Msa0257110:CDS |
TTACTCCATGATCTATATCT+CGG | 0.474778 | 2_2:+52829864 | None:intergenic |
GTGGTAACTTCATTATCATC+GGG | 0.475583 | 2_2:+52829933 | None:intergenic |
AGTTACAGTATGAGTAATGC+AGG | 0.480790 | 2_2:-52830302 | Msa0257110:CDS |
TCTATGAACCTGTTGAAGAA+AGG | 0.480955 | 2_2:+52828952 | None:intergenic |
CCACGGGCATATTTAGAGAC+TGG | 0.481168 | 2_2:+52829261 | None:intergenic |
CTCTAAATATGCCCGTGGCA+AGG | 0.481671 | 2_2:-52829256 | Msa0257110:CDS |
CAAGCTCTTGCCGCAAGACC+TGG | 0.482569 | 2_2:-52829321 | Msa0257110:CDS |
CACTCTCATCGGCTGTGTGA+TGG | 0.485533 | 2_2:+52829076 | None:intergenic |
GCCGAATTTCTTAGACATCA+AGG | 0.487664 | 2_2:+52829206 | None:intergenic |
GCACCCCACGTGCGGATCAC+AGG | 0.488784 | 2_2:-52829294 | Msa0257110:CDS |
GTCGAGCGACACGAACTACT+TGG | 0.488828 | 2_2:-52828790 | Msa0257110:CDS |
TCAAGTGATGAGTTATAAGA+AGG | 0.489765 | 2_2:+52830101 | None:intergenic |
GAAACGGAGGAAGTTGGAAG+AGG | 0.492251 | 2_2:-52829754 | Msa0257110:CDS |
TATACACTAGTTGAGAAAGA+TGG | 0.493554 | 2_2:-52828664 | Msa0257110:CDS |
TTTGAATATATTGTGACCCT+TGG | 0.497550 | 2_2:+52829835 | None:intergenic |
TCTAAATATGCCCGTGGCAA+GGG | 0.498457 | 2_2:-52829255 | Msa0257110:CDS |
TACTCCATGATCTATATCTC+GGG | 0.499547 | 2_2:+52829865 | None:intergenic |
GCATCCCGGTCGAGTTTCAT+GGG | 0.501937 | 2_2:-52829185 | Msa0257110:CDS |
TGTCATTGCATGCGAAGGTA+AGG | 0.508199 | 2_2:-52828818 | Msa0257110:CDS |
GGAGCAGCATTGTTTGGCTC+GGG | 0.508648 | 2_2:-52828851 | Msa0257110:CDS |
TGGAGCAGCATTGTTTGGCT+CGG | 0.508972 | 2_2:-52828852 | Msa0257110:CDS |
CGCATGTTACCAGCAGTAGC+AGG | 0.509183 | 2_2:-52829803 | Msa0257110:CDS |
ATACACTAGTTGAGAAAGAT+GGG | 0.509202 | 2_2:-52828663 | Msa0257110:CDS |
TGTGGTAACTTCATTATCAT+CGG | 0.510280 | 2_2:+52829932 | None:intergenic |
ATTCCTGCATGCTTCGGCAA+TGG | 0.514666 | 2_2:+52829407 | None:intergenic |
TCTCCTTGCTATTTCTTGAG+AGG | 0.515388 | 2_2:+52828884 | None:intergenic |
TGTAGAGAAACGGAGGAAGT+TGG | 0.515864 | 2_2:-52829760 | Msa0257110:CDS |
ATCTCTACAAGGGTTTCCAT+CGG | 0.519926 | 2_2:-52829727 | Msa0257110:CDS |
TGATCTTTGCGTATATTGGT+TGG | 0.521650 | 2_2:+52830076 | None:intergenic |
GATGGAAAAGTTGACATGTA+AGG | 0.524661 | 2_2:+52830275 | None:intergenic |
CCGACCCGAGATATAGATCA+TGG | 0.528062 | 2_2:-52829869 | Msa0257110:CDS |
TCTCTACAAGGGTTTCCATC+GGG | 0.532312 | 2_2:-52829726 | Msa0257110:CDS |
GCTCTTGCCGCAAGACCTGG+TGG | 0.533032 | 2_2:-52829318 | Msa0257110:CDS |
TCTTGCCGCAAGACCTGGTG+GGG | 0.535298 | 2_2:-52829316 | Msa0257110:CDS |
CTCCCGAGTTGTGTTGCTCG+TGG | 0.537212 | 2_2:+52830144 | None:intergenic |
AACTCGGGAGAAATTCTCTC+TGG | 0.537396 | 2_2:-52830131 | Msa0257110:CDS |
ATTTGATATCTGCTTCAGCT+TGG | 0.537926 | 2_2:-52828612 | Msa0257110:CDS |
CGATTCCTGTGATCCGCACG+TGG | 0.541378 | 2_2:+52829289 | None:intergenic |
GGAATCCCATGAAACTCGAC+CGG | 0.542504 | 2_2:+52829180 | None:intergenic |
GAAGTCTCTTTCTCCTAAAG+TGG | 0.542862 | 2_2:-52829013 | Msa0257110:CDS |
GAATCAAAATGAGAGGAAAA+CGG | 0.543811 | 2_2:+52830194 | None:intergenic |
TTTGGTTACATGGCTGCCAA+TGG | 0.544829 | 2_2:-52829432 | Msa0257110:CDS |
TACTTCTAGTCCCTTGCCAC+GGG | 0.544995 | 2_2:+52829245 | None:intergenic |
GGCAAGGGACTAGAAGTAGT+TGG | 0.546746 | 2_2:-52829240 | Msa0257110:CDS |
AGAAGGTCTTGTTGCAAGGA+CGG | 0.548822 | 2_2:-52829562 | Msa0257110:CDS |
AGATTGCTCAAGGAACTCAA+TGG | 0.549437 | 2_2:-52829356 | Msa0257110:CDS |
TGTTTGATTCTTGCTCCACA+AGG | 0.549494 | 2_2:+52828986 | None:intergenic |
ATAGACTTTCAGATTGCTCA+AGG | 0.550384 | 2_2:-52829366 | Msa0257110:CDS |
AATCTCAAAAGTCCATCCCT+TGG | 0.551200 | 2_2:+52829039 | None:intergenic |
GAGCCATTGCCGAAGCATGC+AGG | 0.556222 | 2_2:-52829410 | Msa0257110:CDS |
TAGCCACGAGCAACACAACT+CGG | 0.557044 | 2_2:-52830147 | Msa0257110:CDS |
AGAAACTTTAGATTACTACT+TGG | 0.559206 | 2_2:-52828932 | Msa0257110:CDS |
CAGACACGGAGAAGCTTTGG+CGG | 0.563257 | 2_2:-52829118 | Msa0257110:CDS |
GGGTGCCCCACCAGGTCTTG+CGG | 0.563707 | 2_2:+52829311 | None:intergenic |
CTCTTGCCGCAAGACCTGGT+GGG | 0.564705 | 2_2:-52829317 | Msa0257110:CDS |
GGAACTAGAAACCGCTCTGA+TGG | 0.565954 | 2_2:-52829958 | Msa0257110:CDS |
AAGCTGTGCATGTAGAGAAA+CGG | 0.566125 | 2_2:-52829770 | Msa0257110:CDS |
TAAGCACCGAGCCTCTGGAT+TGG | 0.566428 | 2_2:+52829591 | None:intergenic |
TTCATTGGGTGAGAGCATCA+AGG | 0.568298 | 2_2:-52829901 | Msa0257110:CDS |
GAAGAGGATTCATCTCTACA+AGG | 0.568777 | 2_2:-52829738 | Msa0257110:CDS |
TACTTGGTAAGTGGAAGTCT+AGG | 0.570428 | 2_2:-52828774 | Msa0257110:CDS |
TGCCGAAGCATGCAGGAATG+AGG | 0.572488 | 2_2:-52829403 | Msa0257110:CDS |
GTCAATGTCATTGCATGCGA+AGG | 0.575792 | 2_2:-52828823 | Msa0257110:CDS |
GACACGAACTACTTGGTAAG+TGG | 0.581297 | 2_2:-52828783 | Msa0257110:CDS |
TCTTGAGAGGGTGACATCGA+TGG | 0.582838 | 2_2:+52828897 | None:intergenic |
ATTCACATCAACACTCTCAT+CGG | 0.588269 | 2_2:+52829065 | None:intergenic |
TGGTAGAAGGTCTTGTTGCA+AGG | 0.589192 | 2_2:-52829566 | Msa0257110:CDS |
TGCATGCGAAGGTAAGGAAA+GGG | 0.591346 | 2_2:-52828812 | Msa0257110:CDS |
CTACTTCTAGTCCCTTGCCA+CGG | 0.597233 | 2_2:+52829244 | None:intergenic |
CACCCTCTCAAGAAATAGCA+AGG | 0.600143 | 2_2:-52828887 | Msa0257110:CDS |
TTGCATGCGAAGGTAAGGAA+AGG | 0.601660 | 2_2:-52828813 | Msa0257110:CDS |
CCATGATCTATATCTCGGGT+CGG | 0.603332 | 2_2:+52829869 | None:intergenic |
AGCCACGAGCAACACAACTC+GGG | 0.603620 | 2_2:-52830146 | Msa0257110:CDS |
GGGGAACCAATCCAGAGGCT+CGG | 0.604309 | 2_2:-52829597 | Msa0257110:CDS |
GTGTTGATGTGAATAATCCA+AGG | 0.605633 | 2_2:-52829056 | Msa0257110:CDS |
AGTATCAGAATCAAAATGAG+AGG | 0.612504 | 2_2:+52830187 | None:intergenic |
CTGGTGGGGCACCCCACGTG+CGG | 0.613236 | 2_2:-52829302 | Msa0257110:CDS |
GATTCCTGTGATCCGCACGT+GGG | 0.614125 | 2_2:+52829290 | None:intergenic |
AAGAGGATTCATCTCTACAA+GGG | 0.614893 | 2_2:-52829737 | Msa0257110:CDS |
ATTCCTGTGATCCGCACGTG+GGG | 0.622362 | 2_2:+52829291 | None:intergenic |
CTGTGTGATGGAGTTGCAGT+GGG | 0.624698 | 2_2:+52829088 | None:intergenic |
TAGCAAGGAGAGGATTAATG+TGG | 0.632293 | 2_2:-52828872 | Msa0257110:CDS |
GCTCTGAATAGCATCTCAGA+AGG | 0.636572 | 2_2:+52828689 | None:intergenic |
TTGCAAGGACGGAAGCATCA+GGG | 0.638897 | 2_2:-52829551 | Msa0257110:CDS |
CATGGAGTAATGAGCACCAA+GGG | 0.639156 | 2_2:-52829851 | Msa0257110:CDS |
GTTTGATTCTTGCTCCACAA+GGG | 0.642203 | 2_2:+52828987 | None:intergenic |
AATTGCTTCAAATCTCCCGA+TGG | 0.642799 | 2_2:+52829711 | None:intergenic |
ATGGGGCAATGCTCTTAGGG+TGG | 0.644351 | 2_2:-52828645 | Msa0257110:CDS |
ACCCAATGAAGAATTAGATG+TGG | 0.646339 | 2_2:+52829914 | None:intergenic |
GATTGCATGTGCCAAAGCCA+TGG | 0.652232 | 2_2:-52829685 | Msa0257110:CDS |
GAATCCCATGAAACTCGACC+GGG | 0.653388 | 2_2:+52829181 | None:intergenic |
CTTAAGTGCAGAGAGCCTGA+AGG | 0.653965 | 2_2:-52829510 | Msa0257110:CDS |
CTACTGCTGGTAACATGCGA+CGG | 0.655149 | 2_2:+52829807 | None:intergenic |
GATGTGAATAATCCAAGGGA+TGG | 0.658106 | 2_2:-52829051 | Msa0257110:CDS |
GTGGAAGTCTAGGTTGACAA+TGG | 0.658484 | 2_2:-52828764 | Msa0257110:CDS |
GTTACAGTATGAGTAATGCA+GGG | 0.660148 | 2_2:-52830301 | Msa0257110:CDS |
GAATTCACATAAGAACTCAA+AGG | 0.664196 | 2_2:+52828724 | None:intergenic |
CCAGTCTCTAAATATGCCCG+TGG | 0.668167 | 2_2:-52829261 | Msa0257110:CDS |
AGCGGTTTCTAGTTCCAACA+AGG | 0.670534 | 2_2:+52829965 | None:intergenic |
GCTGTGTGATGGAGTTGCAG+TGG | 0.671146 | 2_2:+52829087 | None:intergenic |
TCTCAAGAAATAGCAAGGAG+AGG | 0.677996 | 2_2:-52828882 | Msa0257110:CDS |
CTGTGCATGTAGAGAAACGG+AGG | 0.679325 | 2_2:-52829767 | Msa0257110:CDS |
GACATGCTTGATATCAGACA+CGG | 0.687158 | 2_2:-52829132 | Msa0257110:CDS |
TGGTAACTTCATTATCATCG+GGG | 0.688901 | 2_2:+52829934 | None:intergenic |
GGTAACTTCATTATCATCGG+GGG | 0.691651 | 2_2:+52829935 | None:intergenic |
TGTTGATGTGAATAATCCAA+GGG | 0.710085 | 2_2:-52829055 | Msa0257110:CDS |
AAATGCTGTGTCTATCAATG+GGG | 0.714938 | 2_2:-52829616 | Msa0257110:CDS |
TCATGGAGTAATGAGCACCA+AGG | 0.716608 | 2_2:-52829852 | Msa0257110:CDS |
TACACTAGTTGAGAAAGATG+GGG | 0.719725 | 2_2:-52828662 | Msa0257110:CDS |
TCAATGGGGAACCAATCCAG+AGG | 0.733104 | 2_2:-52829602 | Msa0257110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGTAACCAAATTTTAAGTA+GGG | + | chr2_2:52829488-52829507 | None:intergenic | 20.0% |
!!! | ATGTAACCAAATTTTAAGTA+GGG | + | chr2_2:52829488-52829507 | None:intergenic | 20.0% |
!!! | CATGTAACCAAATTTTAAGT+AGG | + | chr2_2:52829489-52829508 | None:intergenic | 25.0% |
! | CTACTTAAAATTTGGTTACA+TGG | - | chr2_2:52829487-52829506 | Msa0257110:CDS | 25.0% |
! | AGAAACTTTAGATTACTACT+TGG | - | chr2_2:52829997-52830016 | Msa0257110:CDS | 25.0% |
!!! | CATGTAACCAAATTTTAAGT+AGG | + | chr2_2:52829489-52829508 | None:intergenic | 25.0% |
! | CTACTTAAAATTTGGTTACA+TGG | - | chr2_2:52829487-52829506 | Msa0257110:CDS | 25.0% |
! | AGAAACTTTAGATTACTACT+TGG | - | chr2_2:52829997-52830016 | Msa0257110:CDS | 25.0% |
GAATCAAAATGAGAGGAAAA+CGG | + | chr2_2:52828738-52828757 | None:intergenic | 30.0% | |
AGTATCAGAATCAAAATGAG+AGG | + | chr2_2:52828745-52828764 | None:intergenic | 30.0% | |
TCAAGTGATGAGTTATAAGA+AGG | + | chr2_2:52828831-52828850 | None:intergenic | 30.0% | |
AGAATGATCTTTGCGTATAT+TGG | + | chr2_2:52828860-52828879 | None:intergenic | 30.0% | |
TGTGGTAACTTCATTATCAT+CGG | + | chr2_2:52829000-52829019 | None:intergenic | 30.0% | |
TACCACATCTAATTCTTCAT+TGG | - | chr2_2:52829013-52829032 | Msa0257110:CDS | 30.0% | |
ACCACATCTAATTCTTCATT+GGG | - | chr2_2:52829014-52829033 | Msa0257110:CDS | 30.0% | |
TTACTCCATGATCTATATCT+CGG | + | chr2_2:52829068-52829087 | None:intergenic | 30.0% | |
TTTGAATATATTGTGACCCT+TGG | + | chr2_2:52829097-52829116 | None:intergenic | 30.0% | |
! | TTTTGACCGATTGATAGAAA+CGG | - | chr2_2:52829286-52829305 | Msa0257110:CDS | 30.0% |
ATCTGTCCCTACTTAAAATT+TGG | - | chr2_2:52829479-52829498 | Msa0257110:CDS | 30.0% | |
TGTTGATGTGAATAATCCAA+GGG | - | chr2_2:52829874-52829893 | Msa0257110:CDS | 30.0% | |
GAATTCACATAAGAACTCAA+AGG | + | chr2_2:52830208-52830227 | None:intergenic | 30.0% | |
TATACACTAGTTGAGAAAGA+TGG | - | chr2_2:52830265-52830284 | Msa0257110:CDS | 30.0% | |
ATACACTAGTTGAGAAAGAT+GGG | - | chr2_2:52830266-52830285 | Msa0257110:CDS | 30.0% | |
GAATCAAAATGAGAGGAAAA+CGG | + | chr2_2:52828738-52828757 | None:intergenic | 30.0% | |
AGTATCAGAATCAAAATGAG+AGG | + | chr2_2:52828745-52828764 | None:intergenic | 30.0% | |
TCAAGTGATGAGTTATAAGA+AGG | + | chr2_2:52828831-52828850 | None:intergenic | 30.0% | |
AGAATGATCTTTGCGTATAT+TGG | + | chr2_2:52828860-52828879 | None:intergenic | 30.0% | |
TGTGGTAACTTCATTATCAT+CGG | + | chr2_2:52829000-52829019 | None:intergenic | 30.0% | |
TACCACATCTAATTCTTCAT+TGG | - | chr2_2:52829013-52829032 | Msa0257110:CDS | 30.0% | |
ACCACATCTAATTCTTCATT+GGG | - | chr2_2:52829014-52829033 | Msa0257110:CDS | 30.0% | |
TTACTCCATGATCTATATCT+CGG | + | chr2_2:52829068-52829087 | None:intergenic | 30.0% | |
TTTGAATATATTGTGACCCT+TGG | + | chr2_2:52829097-52829116 | None:intergenic | 30.0% | |
! | TTTTGACCGATTGATAGAAA+CGG | - | chr2_2:52829286-52829305 | Msa0257110:CDS | 30.0% |
ATCTGTCCCTACTTAAAATT+TGG | - | chr2_2:52829479-52829498 | Msa0257110:CDS | 30.0% | |
TGTTGATGTGAATAATCCAA+GGG | - | chr2_2:52829874-52829893 | Msa0257110:CDS | 30.0% | |
GAATTCACATAAGAACTCAA+AGG | + | chr2_2:52830208-52830227 | None:intergenic | 30.0% | |
TATACACTAGTTGAGAAAGA+TGG | - | chr2_2:52830265-52830284 | Msa0257110:CDS | 30.0% | |
ATACACTAGTTGAGAAAGAT+GGG | - | chr2_2:52830266-52830285 | Msa0257110:CDS | 30.0% | |
AGTTACAGTATGAGTAATGC+AGG | - | chr2_2:52828627-52828646 | Msa0257110:CDS | 35.0% | |
GTTACAGTATGAGTAATGCA+GGG | - | chr2_2:52828628-52828647 | Msa0257110:CDS | 35.0% | |
GATGGAAAAGTTGACATGTA+AGG | + | chr2_2:52828657-52828676 | None:intergenic | 35.0% | |
TGATCTTTGCGTATATTGGT+TGG | + | chr2_2:52828856-52828875 | None:intergenic | 35.0% | |
!!! | TGTCTGATTTTCTGGTTACT+TGG | + | chr2_2:52828942-52828961 | None:intergenic | 35.0% |
TGGTAACTTCATTATCATCG+GGG | + | chr2_2:52828998-52829017 | None:intergenic | 35.0% | |
GTGGTAACTTCATTATCATC+GGG | + | chr2_2:52828999-52829018 | None:intergenic | 35.0% | |
ACCCAATGAAGAATTAGATG+TGG | + | chr2_2:52829018-52829037 | None:intergenic | 35.0% | |
TACTCCATGATCTATATCTC+GGG | + | chr2_2:52829067-52829086 | None:intergenic | 35.0% | |
AAGAGGATTCATCTCTACAA+GGG | - | chr2_2:52829192-52829211 | Msa0257110:CDS | 35.0% | |
TTCTAGCCGTTTCTATCAAT+CGG | + | chr2_2:52829295-52829314 | None:intergenic | 35.0% | |
AGAAATGCTGTGTCTATCAA+TGG | - | chr2_2:52829311-52829330 | Msa0257110:CDS | 35.0% | |
GAAATGCTGTGTCTATCAAT+GGG | - | chr2_2:52829312-52829331 | Msa0257110:CDS | 35.0% | |
AAATGCTGTGTCTATCAATG+GGG | - | chr2_2:52829313-52829332 | Msa0257110:CDS | 35.0% | |
ATAGACTTTCAGATTGCTCA+AGG | - | chr2_2:52829563-52829582 | Msa0257110:CDS | 35.0% | |
GCCTTGATGTCTAAGAAATT+CGG | - | chr2_2:52829722-52829741 | Msa0257110:CDS | 35.0% | |
! | TTTCATGGGATTCCTGTTTT+CGG | - | chr2_2:52829758-52829777 | Msa0257110:CDS | 35.0% |
ATTCACATCAACACTCTCAT+CGG | + | chr2_2:52829867-52829886 | None:intergenic | 35.0% | |
! | GTGTTGATGTGAATAATCCA+AGG | - | chr2_2:52829873-52829892 | Msa0257110:CDS | 35.0% |
TCTATGAACCTGTTGAAGAA+AGG | + | chr2_2:52829980-52829999 | None:intergenic | 35.0% | |
TACACTAGTTGAGAAAGATG+GGG | - | chr2_2:52830267-52830286 | Msa0257110:CDS | 35.0% | |
ATTTGATATCTGCTTCAGCT+TGG | - | chr2_2:52830317-52830336 | Msa0257110:CDS | 35.0% | |
AGTTACAGTATGAGTAATGC+AGG | - | chr2_2:52828627-52828646 | Msa0257110:CDS | 35.0% | |
GTTACAGTATGAGTAATGCA+GGG | - | chr2_2:52828628-52828647 | Msa0257110:CDS | 35.0% | |
GATGGAAAAGTTGACATGTA+AGG | + | chr2_2:52828657-52828676 | None:intergenic | 35.0% | |
TGATCTTTGCGTATATTGGT+TGG | + | chr2_2:52828856-52828875 | None:intergenic | 35.0% | |
!!! | TGTCTGATTTTCTGGTTACT+TGG | + | chr2_2:52828942-52828961 | None:intergenic | 35.0% |
TGGTAACTTCATTATCATCG+GGG | + | chr2_2:52828998-52829017 | None:intergenic | 35.0% | |
GTGGTAACTTCATTATCATC+GGG | + | chr2_2:52828999-52829018 | None:intergenic | 35.0% | |
ACCCAATGAAGAATTAGATG+TGG | + | chr2_2:52829018-52829037 | None:intergenic | 35.0% | |
TACTCCATGATCTATATCTC+GGG | + | chr2_2:52829067-52829086 | None:intergenic | 35.0% | |
AAGAGGATTCATCTCTACAA+GGG | - | chr2_2:52829192-52829211 | Msa0257110:CDS | 35.0% | |
TTCTAGCCGTTTCTATCAAT+CGG | + | chr2_2:52829295-52829314 | None:intergenic | 35.0% | |
AGAAATGCTGTGTCTATCAA+TGG | - | chr2_2:52829311-52829330 | Msa0257110:CDS | 35.0% | |
GAAATGCTGTGTCTATCAAT+GGG | - | chr2_2:52829312-52829331 | Msa0257110:CDS | 35.0% | |
AAATGCTGTGTCTATCAATG+GGG | - | chr2_2:52829313-52829332 | Msa0257110:CDS | 35.0% | |
ATAGACTTTCAGATTGCTCA+AGG | - | chr2_2:52829563-52829582 | Msa0257110:CDS | 35.0% | |
GCCTTGATGTCTAAGAAATT+CGG | - | chr2_2:52829722-52829741 | Msa0257110:CDS | 35.0% | |
! | TTTCATGGGATTCCTGTTTT+CGG | - | chr2_2:52829758-52829777 | Msa0257110:CDS | 35.0% |
ATTCACATCAACACTCTCAT+CGG | + | chr2_2:52829867-52829886 | None:intergenic | 35.0% | |
! | GTGTTGATGTGAATAATCCA+AGG | - | chr2_2:52829873-52829892 | Msa0257110:CDS | 35.0% |
TCTATGAACCTGTTGAAGAA+AGG | + | chr2_2:52829980-52829999 | None:intergenic | 35.0% | |
TACACTAGTTGAGAAAGATG+GGG | - | chr2_2:52830267-52830286 | Msa0257110:CDS | 35.0% | |
ATTTGATATCTGCTTCAGCT+TGG | - | chr2_2:52830317-52830336 | Msa0257110:CDS | 35.0% | |
! | ACTTTTCCATCACTGCCAAA+TGG | - | chr2_2:52828666-52828685 | Msa0257110:CDS | 40.0% |
AAGGATCCAAGCAAACCATT+TGG | + | chr2_2:52828684-52828703 | None:intergenic | 40.0% | |
TTGCTTGGATCCTTGAAAGT+TGG | - | chr2_2:52828690-52828709 | Msa0257110:CDS | 40.0% | |
GTTTCCAAAGCCAACTTTCA+AGG | + | chr2_2:52828703-52828722 | None:intergenic | 40.0% | |
ATGAGAGGAAAACGGTGAAT+CGG | + | chr2_2:52828730-52828749 | None:intergenic | 40.0% | |
GGTAACTTCATTATCATCGG+GGG | + | chr2_2:52828997-52829016 | None:intergenic | 40.0% | |
AAGCTGTGCATGTAGAGAAA+CGG | - | chr2_2:52829159-52829178 | Msa0257110:CDS | 40.0% | |
GAAGAGGATTCATCTCTACA+AGG | - | chr2_2:52829191-52829210 | Msa0257110:CDS | 40.0% | |
ATCTCTACAAGGGTTTCCAT+CGG | - | chr2_2:52829202-52829221 | Msa0257110:CDS | 40.0% | |
AATTGCTTCAAATCTCCCGA+TGG | + | chr2_2:52829221-52829240 | None:intergenic | 40.0% | |
!!! | TTCTGTGTTGTTTTCAGCCA+TGG | + | chr2_2:52829264-52829283 | None:intergenic | 40.0% |
GTGAGTAATTCTTCACCTTC+AGG | + | chr2_2:52829437-52829456 | None:intergenic | 40.0% | |
AGATTGCTCAAGGAACTCAA+TGG | - | chr2_2:52829573-52829592 | Msa0257110:CDS | 40.0% | |
AGAAGTAGTTGGAGAGAGAT+TGG | - | chr2_2:52829700-52829719 | Msa0257110:CDS | 40.0% | |
GCCGAATTTCTTAGACATCA+AGG | + | chr2_2:52829726-52829745 | None:intergenic | 40.0% | |
GACATGCTTGATATCAGACA+CGG | - | chr2_2:52829797-52829816 | Msa0257110:CDS | 40.0% | |
GATGTGAATAATCCAAGGGA+TGG | - | chr2_2:52829878-52829897 | Msa0257110:CDS | 40.0% | |
AATCTCAAAAGTCCATCCCT+TGG | + | chr2_2:52829893-52829912 | None:intergenic | 40.0% | |
!!! | AAGGGATGGACTTTTGAGAT+TGG | - | chr2_2:52829892-52829911 | Msa0257110:CDS | 40.0% |
GAAGTCTCTTTCTCCTAAAG+TGG | - | chr2_2:52829916-52829935 | Msa0257110:CDS | 40.0% | |
GTTTGATTCTTGCTCCACAA+GGG | + | chr2_2:52829945-52829964 | None:intergenic | 40.0% | |
TGTTTGATTCTTGCTCCACA+AGG | + | chr2_2:52829946-52829965 | None:intergenic | 40.0% | |
ACACAACACCTTTCTTCAAC+AGG | - | chr2_2:52829969-52829988 | Msa0257110:CDS | 40.0% | |
!! | CTCCTTGCTATTTCTTGAGA+GGG | + | chr2_2:52830047-52830066 | None:intergenic | 40.0% |
!! | TCTCCTTGCTATTTCTTGAG+AGG | + | chr2_2:52830048-52830067 | None:intergenic | 40.0% |
TCTCAAGAAATAGCAAGGAG+AGG | - | chr2_2:52830047-52830066 | Msa0257110:CDS | 40.0% | |
TAGCAAGGAGAGGATTAATG+TGG | - | chr2_2:52830057-52830076 | Msa0257110:CDS | 40.0% | |
TAATGTGGAGCAGCATTGTT+TGG | - | chr2_2:52830072-52830091 | Msa0257110:CDS | 40.0% | |
TACTTGGTAAGTGGAAGTCT+AGG | - | chr2_2:52830155-52830174 | Msa0257110:CDS | 40.0% | |
! | ACTTTTCCATCACTGCCAAA+TGG | - | chr2_2:52828666-52828685 | Msa0257110:CDS | 40.0% |
AAGGATCCAAGCAAACCATT+TGG | + | chr2_2:52828684-52828703 | None:intergenic | 40.0% | |
TTGCTTGGATCCTTGAAAGT+TGG | - | chr2_2:52828690-52828709 | Msa0257110:CDS | 40.0% | |
GTTTCCAAAGCCAACTTTCA+AGG | + | chr2_2:52828703-52828722 | None:intergenic | 40.0% | |
ATGAGAGGAAAACGGTGAAT+CGG | + | chr2_2:52828730-52828749 | None:intergenic | 40.0% | |
GGTAACTTCATTATCATCGG+GGG | + | chr2_2:52828997-52829016 | None:intergenic | 40.0% | |
AAGCTGTGCATGTAGAGAAA+CGG | - | chr2_2:52829159-52829178 | Msa0257110:CDS | 40.0% | |
GAAGAGGATTCATCTCTACA+AGG | - | chr2_2:52829191-52829210 | Msa0257110:CDS | 40.0% | |
ATCTCTACAAGGGTTTCCAT+CGG | - | chr2_2:52829202-52829221 | Msa0257110:CDS | 40.0% | |
AATTGCTTCAAATCTCCCGA+TGG | + | chr2_2:52829221-52829240 | None:intergenic | 40.0% | |
!!! | TTCTGTGTTGTTTTCAGCCA+TGG | + | chr2_2:52829264-52829283 | None:intergenic | 40.0% |
GTGAGTAATTCTTCACCTTC+AGG | + | chr2_2:52829437-52829456 | None:intergenic | 40.0% | |
AGATTGCTCAAGGAACTCAA+TGG | - | chr2_2:52829573-52829592 | Msa0257110:CDS | 40.0% | |
AGAAGTAGTTGGAGAGAGAT+TGG | - | chr2_2:52829700-52829719 | Msa0257110:CDS | 40.0% | |
GCCGAATTTCTTAGACATCA+AGG | + | chr2_2:52829726-52829745 | None:intergenic | 40.0% | |
GACATGCTTGATATCAGACA+CGG | - | chr2_2:52829797-52829816 | Msa0257110:CDS | 40.0% | |
GATGTGAATAATCCAAGGGA+TGG | - | chr2_2:52829878-52829897 | Msa0257110:CDS | 40.0% | |
AATCTCAAAAGTCCATCCCT+TGG | + | chr2_2:52829893-52829912 | None:intergenic | 40.0% | |
!!! | AAGGGATGGACTTTTGAGAT+TGG | - | chr2_2:52829892-52829911 | Msa0257110:CDS | 40.0% |
GAAGTCTCTTTCTCCTAAAG+TGG | - | chr2_2:52829916-52829935 | Msa0257110:CDS | 40.0% | |
GTTTGATTCTTGCTCCACAA+GGG | + | chr2_2:52829945-52829964 | None:intergenic | 40.0% | |
TGTTTGATTCTTGCTCCACA+AGG | + | chr2_2:52829946-52829965 | None:intergenic | 40.0% | |
ACACAACACCTTTCTTCAAC+AGG | - | chr2_2:52829969-52829988 | Msa0257110:CDS | 40.0% | |
!! | CTCCTTGCTATTTCTTGAGA+GGG | + | chr2_2:52830047-52830066 | None:intergenic | 40.0% |
!! | TCTCCTTGCTATTTCTTGAG+AGG | + | chr2_2:52830048-52830067 | None:intergenic | 40.0% |
TCTCAAGAAATAGCAAGGAG+AGG | - | chr2_2:52830047-52830066 | Msa0257110:CDS | 40.0% | |
TAGCAAGGAGAGGATTAATG+TGG | - | chr2_2:52830057-52830076 | Msa0257110:CDS | 40.0% | |
TAATGTGGAGCAGCATTGTT+TGG | - | chr2_2:52830072-52830091 | Msa0257110:CDS | 40.0% | |
TACTTGGTAAGTGGAAGTCT+AGG | - | chr2_2:52830155-52830174 | Msa0257110:CDS | 40.0% | |
AGCAAACCATTTGGCAGTGA+TGG | + | chr2_2:52828675-52828694 | None:intergenic | 45.0% | |
!! | TCACTGCCAAATGGTTTGCT+TGG | - | chr2_2:52828675-52828694 | Msa0257110:CDS | 45.0% |
! | GGATCCTTGAAAGTTGGCTT+TGG | - | chr2_2:52828696-52828715 | Msa0257110:CDS | 45.0% |
TGAGAGGAAAACGGTGAATC+GGG | + | chr2_2:52828729-52828748 | None:intergenic | 45.0% | |
AACTCGGGAGAAATTCTCTC+TGG | - | chr2_2:52828798-52828817 | Msa0257110:CDS | 45.0% | |
! | ACAAGGCGTGTCTGATTTTC+TGG | + | chr2_2:52828950-52828969 | None:intergenic | 45.0% |
GAAAATCAGACACGCCTTGT+TGG | - | chr2_2:52828950-52828969 | Msa0257110:CDS | 45.0% | |
!! | AGCGGTTTCTAGTTCCAACA+AGG | + | chr2_2:52828967-52828986 | None:intergenic | 45.0% |
!! | TTCATTGGGTGAGAGCATCA+AGG | - | chr2_2:52829028-52829047 | Msa0257110:CDS | 45.0% |
CCATGATCTATATCTCGGGT+CGG | + | chr2_2:52829063-52829082 | None:intergenic | 45.0% | |
TCATGGAGTAATGAGCACCA+AGG | - | chr2_2:52829077-52829096 | Msa0257110:CDS | 45.0% | |
CATGGAGTAATGAGCACCAA+GGG | - | chr2_2:52829078-52829097 | Msa0257110:CDS | 45.0% | |
ATTTGATTGCCTGCTACTGC+TGG | + | chr2_2:52829138-52829157 | None:intergenic | 45.0% | |
TGTAGAGAAACGGAGGAAGT+TGG | - | chr2_2:52829169-52829188 | Msa0257110:CDS | 45.0% | |
TCTCTACAAGGGTTTCCATC+GGG | - | chr2_2:52829203-52829222 | Msa0257110:CDS | 45.0% | |
!! | GTTGTTTTCAGCCATGGCTT+TGG | + | chr2_2:52829258-52829277 | None:intergenic | 45.0% |
!! | CTCGGTGCTTATATGGTAGA+AGG | - | chr2_2:52829350-52829369 | Msa0257110:CDS | 45.0% |
!! | TGGTAGAAGGTCTTGTTGCA+AGG | - | chr2_2:52829363-52829382 | Msa0257110:CDS | 45.0% |
!! | AGAAGGTCTTGTTGCAAGGA+CGG | - | chr2_2:52829367-52829386 | Msa0257110:CDS | 45.0% |
TTCAGGCTCTCTGCACTTAA+GGG | + | chr2_2:52829420-52829439 | None:intergenic | 45.0% | |
TTTGGTTACATGGCTGCCAA+TGG | - | chr2_2:52829497-52829516 | Msa0257110:CDS | 45.0% | |
ATCCTCATTCCTGCATGCTT+CGG | + | chr2_2:52829531-52829550 | None:intergenic | 45.0% | |
TCTAAATATGCCCGTGGCAA+GGG | - | chr2_2:52829674-52829693 | Msa0257110:CDS | 45.0% | |
GTCTAAGAAATTCGGCATCC+CGG | - | chr2_2:52829730-52829749 | Msa0257110:CDS | 45.0% | |
TATCAGACACGGAGAAGCTT+TGG | - | chr2_2:52829808-52829827 | Msa0257110:CDS | 45.0% | |
CACCCTCTCAAGAAATAGCA+AGG | - | chr2_2:52830042-52830061 | Msa0257110:CDS | 45.0% | |
GTCAATGTCATTGCATGCGA+AGG | - | chr2_2:52830106-52830125 | Msa0257110:CDS | 45.0% | |
TGTCATTGCATGCGAAGGTA+AGG | - | chr2_2:52830111-52830130 | Msa0257110:CDS | 45.0% | |
TTGCATGCGAAGGTAAGGAA+AGG | - | chr2_2:52830116-52830135 | Msa0257110:CDS | 45.0% | |
TGCATGCGAAGGTAAGGAAA+GGG | - | chr2_2:52830117-52830136 | Msa0257110:CDS | 45.0% | |
GACACGAACTACTTGGTAAG+TGG | - | chr2_2:52830146-52830165 | Msa0257110:CDS | 45.0% | |
! | GTGGAAGTCTAGGTTGACAA+TGG | - | chr2_2:52830165-52830184 | Msa0257110:CDS | 45.0% |
! | AAGTCTAGGTTGACAATGGC+TGG | - | chr2_2:52830169-52830188 | Msa0257110:CDS | 45.0% |
! | GCTCTGAATAGCATCTCAGA+AGG | + | chr2_2:52830243-52830262 | None:intergenic | 45.0% |
AAAGATGGGGCAATGCTCTT+AGG | - | chr2_2:52830280-52830299 | Msa0257110:CDS | 45.0% | |
AAGATGGGGCAATGCTCTTA+GGG | - | chr2_2:52830281-52830300 | Msa0257110:CDS | 45.0% | |
AGCAAACCATTTGGCAGTGA+TGG | + | chr2_2:52828675-52828694 | None:intergenic | 45.0% | |
!! | TCACTGCCAAATGGTTTGCT+TGG | - | chr2_2:52828675-52828694 | Msa0257110:CDS | 45.0% |
! | GGATCCTTGAAAGTTGGCTT+TGG | - | chr2_2:52828696-52828715 | Msa0257110:CDS | 45.0% |
TGAGAGGAAAACGGTGAATC+GGG | + | chr2_2:52828729-52828748 | None:intergenic | 45.0% | |
AACTCGGGAGAAATTCTCTC+TGG | - | chr2_2:52828798-52828817 | Msa0257110:CDS | 45.0% | |
! | ACAAGGCGTGTCTGATTTTC+TGG | + | chr2_2:52828950-52828969 | None:intergenic | 45.0% |
GAAAATCAGACACGCCTTGT+TGG | - | chr2_2:52828950-52828969 | Msa0257110:CDS | 45.0% | |
!! | AGCGGTTTCTAGTTCCAACA+AGG | + | chr2_2:52828967-52828986 | None:intergenic | 45.0% |
!! | TTCATTGGGTGAGAGCATCA+AGG | - | chr2_2:52829028-52829047 | Msa0257110:CDS | 45.0% |
CCATGATCTATATCTCGGGT+CGG | + | chr2_2:52829063-52829082 | None:intergenic | 45.0% | |
TCATGGAGTAATGAGCACCA+AGG | - | chr2_2:52829077-52829096 | Msa0257110:CDS | 45.0% | |
CATGGAGTAATGAGCACCAA+GGG | - | chr2_2:52829078-52829097 | Msa0257110:CDS | 45.0% | |
ATTTGATTGCCTGCTACTGC+TGG | + | chr2_2:52829138-52829157 | None:intergenic | 45.0% | |
TGTAGAGAAACGGAGGAAGT+TGG | - | chr2_2:52829169-52829188 | Msa0257110:CDS | 45.0% | |
TCTCTACAAGGGTTTCCATC+GGG | - | chr2_2:52829203-52829222 | Msa0257110:CDS | 45.0% | |
!! | GTTGTTTTCAGCCATGGCTT+TGG | + | chr2_2:52829258-52829277 | None:intergenic | 45.0% |
!! | CTCGGTGCTTATATGGTAGA+AGG | - | chr2_2:52829350-52829369 | Msa0257110:CDS | 45.0% |
!! | TGGTAGAAGGTCTTGTTGCA+AGG | - | chr2_2:52829363-52829382 | Msa0257110:CDS | 45.0% |
!! | AGAAGGTCTTGTTGCAAGGA+CGG | - | chr2_2:52829367-52829386 | Msa0257110:CDS | 45.0% |
TTCAGGCTCTCTGCACTTAA+GGG | + | chr2_2:52829420-52829439 | None:intergenic | 45.0% | |
TTTGGTTACATGGCTGCCAA+TGG | - | chr2_2:52829497-52829516 | Msa0257110:CDS | 45.0% | |
ATCCTCATTCCTGCATGCTT+CGG | + | chr2_2:52829531-52829550 | None:intergenic | 45.0% | |
TCTAAATATGCCCGTGGCAA+GGG | - | chr2_2:52829674-52829693 | Msa0257110:CDS | 45.0% | |
GTCTAAGAAATTCGGCATCC+CGG | - | chr2_2:52829730-52829749 | Msa0257110:CDS | 45.0% | |
TATCAGACACGGAGAAGCTT+TGG | - | chr2_2:52829808-52829827 | Msa0257110:CDS | 45.0% | |
CACCCTCTCAAGAAATAGCA+AGG | - | chr2_2:52830042-52830061 | Msa0257110:CDS | 45.0% | |
GTCAATGTCATTGCATGCGA+AGG | - | chr2_2:52830106-52830125 | Msa0257110:CDS | 45.0% | |
TGTCATTGCATGCGAAGGTA+AGG | - | chr2_2:52830111-52830130 | Msa0257110:CDS | 45.0% | |
TTGCATGCGAAGGTAAGGAA+AGG | - | chr2_2:52830116-52830135 | Msa0257110:CDS | 45.0% | |
TGCATGCGAAGGTAAGGAAA+GGG | - | chr2_2:52830117-52830136 | Msa0257110:CDS | 45.0% | |
GACACGAACTACTTGGTAAG+TGG | - | chr2_2:52830146-52830165 | Msa0257110:CDS | 45.0% | |
! | GTGGAAGTCTAGGTTGACAA+TGG | - | chr2_2:52830165-52830184 | Msa0257110:CDS | 45.0% |
! | AAGTCTAGGTTGACAATGGC+TGG | - | chr2_2:52830169-52830188 | Msa0257110:CDS | 45.0% |
! | GCTCTGAATAGCATCTCAGA+AGG | + | chr2_2:52830243-52830262 | None:intergenic | 45.0% |
AAAGATGGGGCAATGCTCTT+AGG | - | chr2_2:52830280-52830299 | Msa0257110:CDS | 45.0% | |
AAGATGGGGCAATGCTCTTA+GGG | - | chr2_2:52830281-52830300 | Msa0257110:CDS | 45.0% | |
TAGCCACGAGCAACACAACT+CGG | - | chr2_2:52828782-52828801 | Msa0257110:CDS | 50.0% | |
GGAACTAGAAACCGCTCTGA+TGG | - | chr2_2:52828971-52828990 | Msa0257110:CDS | 50.0% | |
CCGACCCGAGATATAGATCA+TGG | - | chr2_2:52829060-52829079 | Msa0257110:CDS | 50.0% | |
CTACTGCTGGTAACATGCGA+CGG | + | chr2_2:52829125-52829144 | None:intergenic | 50.0% | |
CTGTGCATGTAGAGAAACGG+AGG | - | chr2_2:52829162-52829181 | Msa0257110:CDS | 50.0% | |
GAAACGGAGGAAGTTGGAAG+AGG | - | chr2_2:52829175-52829194 | Msa0257110:CDS | 50.0% | |
GATTGCATGTGCCAAAGCCA+TGG | - | chr2_2:52829244-52829263 | Msa0257110:CDS | 50.0% | |
TCAATGGGGAACCAATCCAG+AGG | - | chr2_2:52829327-52829346 | Msa0257110:CDS | 50.0% | |
!! | TTGCAAGGACGGAAGCATCA+GGG | - | chr2_2:52829378-52829397 | Msa0257110:CDS | 50.0% |
CTTCAGGCTCTCTGCACTTA+AGG | + | chr2_2:52829421-52829440 | None:intergenic | 50.0% | |
CTTAAGTGCAGAGAGCCTGA+AGG | - | chr2_2:52829419-52829438 | Msa0257110:CDS | 50.0% | |
ATTCCTGCATGCTTCGGCAA+TGG | + | chr2_2:52829525-52829544 | None:intergenic | 50.0% | |
CCACGGGCATATTTAGAGAC+TGG | + | chr2_2:52829671-52829690 | None:intergenic | 50.0% | |
CCAGTCTCTAAATATGCCCG+TGG | - | chr2_2:52829668-52829687 | Msa0257110:CDS | 50.0% | |
CTCTAAATATGCCCGTGGCA+AGG | - | chr2_2:52829673-52829692 | Msa0257110:CDS | 50.0% | |
TACTTCTAGTCCCTTGCCAC+GGG | + | chr2_2:52829687-52829706 | None:intergenic | 50.0% | |
CTACTTCTAGTCCCTTGCCA+CGG | + | chr2_2:52829688-52829707 | None:intergenic | 50.0% | |
GGCAAGGGACTAGAAGTAGT+TGG | - | chr2_2:52829689-52829708 | Msa0257110:CDS | 50.0% | |
GAATCCCATGAAACTCGACC+GGG | + | chr2_2:52829751-52829770 | None:intergenic | 50.0% | |
GGAATCCCATGAAACTCGAC+CGG | + | chr2_2:52829752-52829771 | None:intergenic | 50.0% | |
AGCATGTCTCTTGTCACGTC+TGG | + | chr2_2:52829785-52829804 | None:intergenic | 50.0% | |
! | CTGTGTGATGGAGTTGCAGT+GGG | + | chr2_2:52829844-52829863 | None:intergenic | 50.0% |
TCCTAAAGTGGTCACCCTTG+TGG | - | chr2_2:52829928-52829947 | Msa0257110:CDS | 50.0% | |
TCCACAAGGGTGACCACTTT+AGG | + | chr2_2:52829932-52829951 | None:intergenic | 50.0% | |
TCTTGAGAGGGTGACATCGA+TGG | + | chr2_2:52830035-52830054 | None:intergenic | 50.0% | |
TGGAGCAGCATTGTTTGGCT+CGG | - | chr2_2:52830077-52830096 | Msa0257110:CDS | 50.0% | |
TAGCCACGAGCAACACAACT+CGG | - | chr2_2:52828782-52828801 | Msa0257110:CDS | 50.0% | |
GGAACTAGAAACCGCTCTGA+TGG | - | chr2_2:52828971-52828990 | Msa0257110:CDS | 50.0% | |
CCGACCCGAGATATAGATCA+TGG | - | chr2_2:52829060-52829079 | Msa0257110:CDS | 50.0% | |
CTACTGCTGGTAACATGCGA+CGG | + | chr2_2:52829125-52829144 | None:intergenic | 50.0% | |
CTGTGCATGTAGAGAAACGG+AGG | - | chr2_2:52829162-52829181 | Msa0257110:CDS | 50.0% | |
GAAACGGAGGAAGTTGGAAG+AGG | - | chr2_2:52829175-52829194 | Msa0257110:CDS | 50.0% | |
GATTGCATGTGCCAAAGCCA+TGG | - | chr2_2:52829244-52829263 | Msa0257110:CDS | 50.0% | |
TCAATGGGGAACCAATCCAG+AGG | - | chr2_2:52829327-52829346 | Msa0257110:CDS | 50.0% | |
!! | TTGCAAGGACGGAAGCATCA+GGG | - | chr2_2:52829378-52829397 | Msa0257110:CDS | 50.0% |
CTTCAGGCTCTCTGCACTTA+AGG | + | chr2_2:52829421-52829440 | None:intergenic | 50.0% | |
CTTAAGTGCAGAGAGCCTGA+AGG | - | chr2_2:52829419-52829438 | Msa0257110:CDS | 50.0% | |
ATTCCTGCATGCTTCGGCAA+TGG | + | chr2_2:52829525-52829544 | None:intergenic | 50.0% | |
CCACGGGCATATTTAGAGAC+TGG | + | chr2_2:52829671-52829690 | None:intergenic | 50.0% | |
CCAGTCTCTAAATATGCCCG+TGG | - | chr2_2:52829668-52829687 | Msa0257110:CDS | 50.0% | |
CTCTAAATATGCCCGTGGCA+AGG | - | chr2_2:52829673-52829692 | Msa0257110:CDS | 50.0% | |
TACTTCTAGTCCCTTGCCAC+GGG | + | chr2_2:52829687-52829706 | None:intergenic | 50.0% | |
CTACTTCTAGTCCCTTGCCA+CGG | + | chr2_2:52829688-52829707 | None:intergenic | 50.0% | |
GGCAAGGGACTAGAAGTAGT+TGG | - | chr2_2:52829689-52829708 | Msa0257110:CDS | 50.0% | |
GAATCCCATGAAACTCGACC+GGG | + | chr2_2:52829751-52829770 | None:intergenic | 50.0% | |
GGAATCCCATGAAACTCGAC+CGG | + | chr2_2:52829752-52829771 | None:intergenic | 50.0% | |
AGCATGTCTCTTGTCACGTC+TGG | + | chr2_2:52829785-52829804 | None:intergenic | 50.0% | |
! | CTGTGTGATGGAGTTGCAGT+GGG | + | chr2_2:52829844-52829863 | None:intergenic | 50.0% |
TCCTAAAGTGGTCACCCTTG+TGG | - | chr2_2:52829928-52829947 | Msa0257110:CDS | 50.0% | |
TCCACAAGGGTGACCACTTT+AGG | + | chr2_2:52829932-52829951 | None:intergenic | 50.0% | |
TCTTGAGAGGGTGACATCGA+TGG | + | chr2_2:52830035-52830054 | None:intergenic | 50.0% | |
TGGAGCAGCATTGTTTGGCT+CGG | - | chr2_2:52830077-52830096 | Msa0257110:CDS | 50.0% | |
AGCCACGAGCAACACAACTC+GGG | - | chr2_2:52828783-52828802 | Msa0257110:CDS | 55.0% | |
CGCATGTTACCAGCAGTAGC+AGG | - | chr2_2:52829126-52829145 | Msa0257110:CDS | 55.0% | |
!! | TAAGCACCGAGCCTCTGGAT+TGG | + | chr2_2:52829341-52829360 | None:intergenic | 55.0% |
!! | CCATATAAGCACCGAGCCTC+TGG | + | chr2_2:52829346-52829365 | None:intergenic | 55.0% |
!! | CCAGAGGCTCGGTGCTTATA+TGG | - | chr2_2:52829343-52829362 | Msa0257110:CDS | 55.0% |
!! | GTTGCAAGGACGGAAGCATC+AGG | - | chr2_2:52829377-52829396 | Msa0257110:CDS | 55.0% |
TGCTTCGGCAATGGCTCCAT+TGG | + | chr2_2:52829516-52829535 | None:intergenic | 55.0% | |
TGCCGAAGCATGCAGGAATG+AGG | - | chr2_2:52829526-52829545 | Msa0257110:CDS | 55.0% | |
ATTCCTGTGATCCGCACGTG+GGG | + | chr2_2:52829641-52829660 | None:intergenic | 55.0% | |
GATTCCTGTGATCCGCACGT+GGG | + | chr2_2:52829642-52829661 | None:intergenic | 55.0% | |
GCATCCCGGTCGAGTTTCAT+GGG | - | chr2_2:52829744-52829763 | Msa0257110:CDS | 55.0% | |
GTCACGTCTGGACCGAAAAC+AGG | + | chr2_2:52829773-52829792 | None:intergenic | 55.0% | |
! | CAGACACGGAGAAGCTTTGG+CGG | - | chr2_2:52829811-52829830 | Msa0257110:CDS | 55.0% |
! | GCTGTGTGATGGAGTTGCAG+TGG | + | chr2_2:52829845-52829864 | None:intergenic | 55.0% |
! | CACTCTCATCGGCTGTGTGA+TGG | + | chr2_2:52829856-52829875 | None:intergenic | 55.0% |
! | GGAGCAGCATTGTTTGGCTC+GGG | - | chr2_2:52830078-52830097 | Msa0257110:CDS | 55.0% |
GTCGAGCGACACGAACTACT+TGG | - | chr2_2:52830139-52830158 | Msa0257110:CDS | 55.0% | |
ATGGGGCAATGCTCTTAGGG+TGG | - | chr2_2:52830284-52830303 | Msa0257110:CDS | 55.0% | |
AGCCACGAGCAACACAACTC+GGG | - | chr2_2:52828783-52828802 | Msa0257110:CDS | 55.0% | |
CGCATGTTACCAGCAGTAGC+AGG | - | chr2_2:52829126-52829145 | Msa0257110:CDS | 55.0% | |
!! | TAAGCACCGAGCCTCTGGAT+TGG | + | chr2_2:52829341-52829360 | None:intergenic | 55.0% |
!! | CCATATAAGCACCGAGCCTC+TGG | + | chr2_2:52829346-52829365 | None:intergenic | 55.0% |
!! | CCAGAGGCTCGGTGCTTATA+TGG | - | chr2_2:52829343-52829362 | Msa0257110:CDS | 55.0% |
!! | GTTGCAAGGACGGAAGCATC+AGG | - | chr2_2:52829377-52829396 | Msa0257110:CDS | 55.0% |
TGCTTCGGCAATGGCTCCAT+TGG | + | chr2_2:52829516-52829535 | None:intergenic | 55.0% | |
TGCCGAAGCATGCAGGAATG+AGG | - | chr2_2:52829526-52829545 | Msa0257110:CDS | 55.0% | |
ATTCCTGTGATCCGCACGTG+GGG | + | chr2_2:52829641-52829660 | None:intergenic | 55.0% | |
GATTCCTGTGATCCGCACGT+GGG | + | chr2_2:52829642-52829661 | None:intergenic | 55.0% | |
GCATCCCGGTCGAGTTTCAT+GGG | - | chr2_2:52829744-52829763 | Msa0257110:CDS | 55.0% | |
GTCACGTCTGGACCGAAAAC+AGG | + | chr2_2:52829773-52829792 | None:intergenic | 55.0% | |
! | CAGACACGGAGAAGCTTTGG+CGG | - | chr2_2:52829811-52829830 | Msa0257110:CDS | 55.0% |
! | GCTGTGTGATGGAGTTGCAG+TGG | + | chr2_2:52829845-52829864 | None:intergenic | 55.0% |
! | CACTCTCATCGGCTGTGTGA+TGG | + | chr2_2:52829856-52829875 | None:intergenic | 55.0% |
! | GGAGCAGCATTGTTTGGCTC+GGG | - | chr2_2:52830078-52830097 | Msa0257110:CDS | 55.0% |
GTCGAGCGACACGAACTACT+TGG | - | chr2_2:52830139-52830158 | Msa0257110:CDS | 55.0% | |
ATGGGGCAATGCTCTTAGGG+TGG | - | chr2_2:52830284-52830303 | Msa0257110:CDS | 55.0% | |
! | CTCCCGAGTTGTGTTGCTCG+TGG | + | chr2_2:52828788-52828807 | None:intergenic | 60.0% |
ATCATCGGGGGCCATCAGAG+CGG | + | chr2_2:52828985-52829004 | None:intergenic | 60.0% | |
GGGGAACCAATCCAGAGGCT+CGG | - | chr2_2:52829332-52829351 | Msa0257110:CDS | 60.0% | |
GAGCCATTGCCGAAGCATGC+AGG | - | chr2_2:52829519-52829538 | Msa0257110:CDS | 60.0% | |
CAAGCTCTTGCCGCAAGACC+TGG | - | chr2_2:52829608-52829627 | Msa0257110:CDS | 60.0% | |
CTCTTGCCGCAAGACCTGGT+GGG | - | chr2_2:52829612-52829631 | Msa0257110:CDS | 60.0% | |
TCTTGCCGCAAGACCTGGTG+GGG | - | chr2_2:52829613-52829632 | Msa0257110:CDS | 60.0% | |
CGATTCCTGTGATCCGCACG+TGG | + | chr2_2:52829643-52829662 | None:intergenic | 60.0% | |
GGCATCCCGGTCGAGTTTCA+TGG | - | chr2_2:52829743-52829762 | Msa0257110:CDS | 60.0% | |
! | CTCCCGAGTTGTGTTGCTCG+TGG | + | chr2_2:52828788-52828807 | None:intergenic | 60.0% |
ATCATCGGGGGCCATCAGAG+CGG | + | chr2_2:52828985-52829004 | None:intergenic | 60.0% | |
GGGGAACCAATCCAGAGGCT+CGG | - | chr2_2:52829332-52829351 | Msa0257110:CDS | 60.0% | |
GAGCCATTGCCGAAGCATGC+AGG | - | chr2_2:52829519-52829538 | Msa0257110:CDS | 60.0% | |
CAAGCTCTTGCCGCAAGACC+TGG | - | chr2_2:52829608-52829627 | Msa0257110:CDS | 60.0% | |
CTCTTGCCGCAAGACCTGGT+GGG | - | chr2_2:52829612-52829631 | Msa0257110:CDS | 60.0% | |
TCTTGCCGCAAGACCTGGTG+GGG | - | chr2_2:52829613-52829632 | Msa0257110:CDS | 60.0% | |
CGATTCCTGTGATCCGCACG+TGG | + | chr2_2:52829643-52829662 | None:intergenic | 60.0% | |
GGCATCCCGGTCGAGTTTCA+TGG | - | chr2_2:52829743-52829762 | Msa0257110:CDS | 60.0% | |
GCTCTTGCCGCAAGACCTGG+TGG | - | chr2_2:52829611-52829630 | Msa0257110:CDS | 65.0% | |
GCTCTTGCCGCAAGACCTGG+TGG | - | chr2_2:52829611-52829630 | Msa0257110:CDS | 65.0% | |
GGGTGCCCCACCAGGTCTTG+CGG | + | chr2_2:52829621-52829640 | None:intergenic | 70.0% | |
GCACCCCACGTGCGGATCAC+AGG | - | chr2_2:52829635-52829654 | Msa0257110:CDS | 70.0% | |
GGGTGCCCCACCAGGTCTTG+CGG | + | chr2_2:52829621-52829640 | None:intergenic | 70.0% | |
GCACCCCACGTGCGGATCAC+AGG | - | chr2_2:52829635-52829654 | Msa0257110:CDS | 70.0% | |
! | CTGGTGGGGCACCCCACGTG+CGG | - | chr2_2:52829627-52829646 | Msa0257110:CDS | 75.0% |
! | CTGGTGGGGCACCCCACGTG+CGG | - | chr2_2:52829627-52829646 | Msa0257110:CDS | 75.0% |
!! | CGCACGTGGGGTGCCCCACC+AGG | + | chr2_2:52829629-52829648 | None:intergenic | 80.0% |
!! | CGCACGTGGGGTGCCCCACC+AGG | + | chr2_2:52829629-52829648 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 52828606 | 52830345 | 52828606 | ID=Msa0257110;Name=Msa0257110 |
chr2_2 | mRNA | 52828606 | 52830345 | 52828606 | ID=Msa0257110-mRNA-1;Parent=Msa0257110;Name=Msa0257110-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|579 |
chr2_2 | exon | 52828606 | 52830345 | 52828606 | ID=Msa0257110-mRNA-1:exon:15839;Parent=Msa0257110-mRNA-1 |
chr2_2 | CDS | 52828606 | 52830345 | 52828606 | ID=Msa0257110-mRNA-1:cds;Parent=Msa0257110-mRNA-1 |
Gene Sequence |
Protein sequence |